View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20302_low_10 (Length: 241)
Name: NF20302_low_10
Description: NF20302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20302_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 28475270 - 28475486
Alignment:
| Q |
11 |
cacagattatggttgaacaaatggaagagcttaagagaaaggtaagaaatgctaactcatatttttccatataaatttctgtttgtaatctttacttatg |
110 |
Q |
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| T |
28475270 |
cacagattatggttgaacaaatggaagagcttaagagaaaggtaagaaatgctaactcatatttttccatataaatttctgtttgtaatctttacttatg |
28475369 |
T |
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| Q |
111 |
ttatgcccttaggttgtattgcgtaatgatattttgacaacaacacaaatattatccgacacagtataatgatacaannnnnnnnctctcatctagataa |
210 |
Q |
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| T |
28475370 |
ttatgcccttaggttgtattgcgtaatgatattttgacaacaacacaaatattatccgacacagtataatgatacaattttttttctctcatctagataa |
28475469 |
T |
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| Q |
211 |
ttgtattgaatgtatgt |
227 |
Q |
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| T |
28475470 |
ttgtattgaatgtatgt |
28475486 |
T |
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