View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20304_high_13 (Length: 333)
Name: NF20304_high_13
Description: NF20304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20304_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 33711205 - 33711515
Alignment:
| Q |
17 |
aaaaatacctcaatgtgaagagtttgctgttgaacctgtggttgtgtgtttctgttatgatggttattcaaggtggccatgttgaattcaaaactgcact |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711205 |
aaaaatacctcaatgtgaagagtttgctgttgaacctgtggttgtgtgtttctgttatgatggttattcaaggtggccatgttgaattcaaaactgcact |
33711304 |
T |
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| Q |
117 |
caactcaagaagaattcaaacactaaaaacagtttcttggattgctctttcactttcttgctccctaccaaagaggcaaaaccagttggaaaaatatctc |
216 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711305 |
caactcaagaagaattcaaacgctaaaaacagtttcttggattgctctttcactttcttgctccctaccaaagaggcaaaaccagttggaaaaatatctc |
33711404 |
T |
|
| Q |
217 |
aatttccaagactctcagaagcttcaaatatgtatgattgaataaatgtcacatttcacatcacactttctttgctttacaagccattgaccaaaacttc |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33711405 |
aatttccaagactctcagaagcttcaaatatgtatgattgaataaatgtcacatttcacatcacactttctttgctttacaagccattgaccaaaacttc |
33711504 |
T |
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| Q |
317 |
attcttctctc |
327 |
Q |
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||||||||||| |
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| T |
33711505 |
attcttctctc |
33711515 |
T |
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