View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20304_low_26 (Length: 239)

Name: NF20304_low_26
Description: NF20304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20304_low_26
NF20304_low_26
[»] chr3 (47 HSPs)
chr3 (16-239)||(50211802-50212025)
chr3 (161-239)||(31403426-31403504)
chr3 (155-229)||(44295604-44295678)
chr3 (155-236)||(44014717-44014798)
chr3 (179-236)||(47132064-47132121)
chr3 (155-212)||(21872214-21872271)
chr3 (167-239)||(22667470-22667542)
chr3 (167-239)||(22724109-22724181)
chr3 (181-236)||(1810047-1810102)
chr3 (155-236)||(25182909-25182987)
chr3 (155-229)||(2413598-2413672)
chr3 (157-235)||(24158437-24158515)
chr3 (163-225)||(25925810-25925872)
chr3 (154-236)||(36646300-36646382)
chr3 (160-234)||(41644369-41644443)
chr3 (179-233)||(47584523-47584577)
chr3 (191-236)||(2175804-2175849)
chr3 (167-236)||(2304202-2304271)
chr3 (155-236)||(11253571-11253652)
chr3 (205-238)||(28828910-28828943)
chr3 (155-236)||(30573834-30573914)
chr3 (168-236)||(19679260-19679328)
chr3 (155-235)||(24785332-24785412)
chr3 (153-225)||(45590732-45590804)
chr3 (154-193)||(8007584-8007623)
chr3 (177-236)||(24624280-24624339)
chr3 (161-236)||(24625267-24625342)
chr3 (157-236)||(49465586-49465665)
chr3 (170-224)||(11041160-11041214)
chr3 (157-235)||(37795667-37795744)
chr3 (155-229)||(50760668-50760742)
chr3 (153-186)||(24684739-24684772)
chr3 (155-232)||(32663712-32663789)
chr3 (189-234)||(34707449-34707494)
chr3 (155-236)||(39980800-39980880)
chr3 (155-200)||(40240740-40240785)
chr3 (155-236)||(45541641-45541722)
chr3 (155-236)||(49845459-49845540)
chr3 (155-239)||(4534294-4534378)
chr3 (168-236)||(9995935-9996002)
chr3 (168-236)||(10216952-10217019)
chr3 (156-236)||(24281117-24281197)
chr3 (155-227)||(35903086-35903158)
chr3 (168-236)||(41724282-41724350)
chr3 (161-205)||(41848641-41848685)
chr3 (203-239)||(45535187-45535223)
chr3 (155-223)||(52323813-52323881)
[»] chr8 (37 HSPs)
chr8 (155-236)||(9700071-9700152)
chr8 (155-239)||(2487927-2488011)
chr8 (166-235)||(4511099-4511168)
chr8 (155-236)||(16162830-16162911)
chr8 (162-233)||(7853452-7853523)
chr8 (155-237)||(6526171-6526253)
chr8 (155-236)||(26479855-26479936)
chr8 (155-236)||(43368619-43368700)
chr8 (168-236)||(7918713-7918781)
chr8 (156-239)||(4560569-4560652)
chr8 (154-201)||(18331819-18331866)
chr8 (157-239)||(1821896-1821978)
chr8 (157-239)||(1856341-1856423)
chr8 (155-233)||(2482936-2483014)
chr8 (166-236)||(35534543-35534612)
chr8 (167-228)||(11376781-11376842)
chr8 (155-236)||(34770938-34771019)
chr8 (155-199)||(35928649-35928693)
chr8 (161-216)||(3634609-3634664)
chr8 (153-236)||(8060739-8060821)
chr8 (154-217)||(14926900-14926963)
chr8 (154-201)||(33553345-33553392)
chr8 (190-237)||(33940087-33940134)
chr8 (155-234)||(34849176-34849255)
chr8 (168-230)||(31884872-31884934)
chr8 (155-201)||(32976478-32976524)
chr8 (155-232)||(778463-778540)
chr8 (167-236)||(29417542-29417611)
chr8 (167-236)||(30191072-30191141)
chr8 (157-230)||(43717855-43717927)
chr8 (155-228)||(44236742-44236815)
chr8 (147-207)||(10488562-10488622)
chr8 (170-230)||(24326107-24326167)
chr8 (178-230)||(38436040-38436092)
chr8 (175-239)||(39049339-39049403)
chr8 (155-235)||(43045644-43045723)
chr8 (167-235)||(43504822-43504890)
[»] chr2 (50 HSPs)
chr2 (154-239)||(19978014-19978099)
chr2 (155-235)||(31982370-31982450)
chr2 (155-236)||(3973612-3973693)
chr2 (155-236)||(8017504-8017585)
chr2 (155-232)||(13866952-13867029)
chr2 (155-236)||(22878168-22878249)
chr2 (153-236)||(4350760-4350843)
chr2 (157-236)||(28803451-28803530)
chr2 (154-236)||(36677722-36677805)
chr2 (155-236)||(27317450-27317530)
chr2 (159-236)||(39622021-39622098)
chr2 (155-228)||(41170688-41170761)
chr2 (156-233)||(43456627-43456704)
chr2 (154-230)||(11513972-11514048)
chr2 (178-225)||(13869050-13869097)
chr2 (159-230)||(17775389-17775460)
chr2 (154-228)||(30331830-30331903)
chr2 (155-236)||(2964728-2964809)
chr2 (155-236)||(4606996-4607076)
chr2 (155-224)||(6547971-6548040)
chr2 (171-216)||(24098190-24098235)
chr2 (155-236)||(40077430-40077511)
chr2 (159-236)||(40776020-40776097)
chr2 (157-236)||(24347792-24347872)
chr2 (168-228)||(29430836-29430896)
chr2 (196-236)||(43808628-43808668)
chr2 (161-236)||(9478369-9478444)
chr2 (155-194)||(18179061-18179100)
chr2 (155-198)||(30990358-30990401)
chr2 (157-236)||(40158788-40158867)
chr2 (167-230)||(43530042-43530105)
chr2 (154-236)||(787402-787484)
chr2 (150-236)||(15120253-15120339)
chr2 (150-236)||(28677573-28677659)
chr2 (159-229)||(33981200-33981270)
chr2 (154-236)||(43811180-43811262)
chr2 (198-227)||(1625980-1626009)
chr2 (155-212)||(3078527-3078584)
chr2 (155-211)||(4326315-4326374)
chr2 (155-236)||(9996808-9996889)
chr2 (155-236)||(12313092-12313173)
chr2 (155-212)||(15370242-15370299)
chr2 (167-236)||(25609866-25609935)
chr2 (190-239)||(32837390-32837439)
chr2 (155-212)||(37276838-37276895)
chr2 (203-239)||(19629428-19629464)
chr2 (203-239)||(19826329-19826365)
chr2 (155-235)||(38076992-38077072)
chr2 (155-207)||(40759259-40759311)
chr2 (188-236)||(44606062-44606110)
[»] chr1 (39 HSPs)
chr1 (156-232)||(6659754-6659830)
chr1 (158-228)||(10199330-10199400)
chr1 (154-235)||(50644173-50644253)
chr1 (157-236)||(4757408-4757487)
chr1 (157-236)||(18327067-18327146)
chr1 (155-230)||(32515360-32515435)
chr1 (157-236)||(51929383-51929462)
chr1 (166-235)||(16980874-16980943)
chr1 (157-212)||(9602575-9602630)
chr1 (157-236)||(15581324-15581403)
chr1 (153-199)||(6292599-6292645)
chr1 (166-228)||(6557051-6557112)
chr1 (166-236)||(28075774-28075844)
chr1 (167-233)||(31517671-31517737)
chr1 (155-236)||(601110-601191)
chr1 (161-237)||(4200303-4200379)
chr1 (156-236)||(24417655-24417735)
chr1 (153-201)||(33975679-33975727)
chr1 (189-237)||(36070250-36070298)
chr1 (158-201)||(2832077-2832120)
chr1 (166-237)||(11217944-11218015)
chr1 (168-239)||(14737658-14737729)
chr1 (155-230)||(33723301-33723376)
chr1 (189-236)||(43371844-43371891)
chr1 (157-236)||(49282635-49282712)
chr1 (188-230)||(8382417-8382459)
chr1 (155-229)||(26866390-26866464)
chr1 (190-236)||(42336685-42336731)
chr1 (167-236)||(1662643-1662712)
chr1 (154-223)||(4180651-4180720)
chr1 (167-236)||(28837284-28837352)
chr1 (157-210)||(29793619-29793672)
chr1 (155-236)||(43420328-43420409)
chr1 (166-230)||(6279475-6279539)
chr1 (157-225)||(7252541-7252609)
chr1 (180-236)||(40485717-40485773)
chr1 (175-223)||(44217454-44217502)
chr1 (192-228)||(49173463-49173499)
chr1 (158-194)||(50725336-50725372)
[»] chr7 (36 HSPs)
chr7 (167-236)||(8094376-8094445)
chr7 (155-236)||(23214925-23215006)
chr7 (155-230)||(33894703-33894778)
chr7 (166-236)||(25670516-25670586)
chr7 (155-236)||(4970711-4970791)
chr7 (155-231)||(30748953-30749029)
chr7 (155-223)||(30751602-30751670)
chr7 (157-237)||(46091662-46091742)
chr7 (158-225)||(529443-529510)
chr7 (160-239)||(13960648-13960726)
chr7 (157-235)||(8427084-8427162)
chr7 (155-236)||(28691755-28691835)
chr7 (150-207)||(29363607-29363664)
chr7 (167-232)||(43854972-43855037)
chr7 (166-231)||(44151406-44151471)
chr7 (168-236)||(2825168-2825236)
chr7 (167-230)||(753045-753108)
chr7 (157-228)||(3836604-3836675)
chr7 (169-236)||(30496775-30496842)
chr7 (155-233)||(17942144-17942222)
chr7 (154-200)||(17988951-17988997)
chr7 (154-236)||(22387814-22387896)
chr7 (156-194)||(25659805-25659843)
chr7 (150-224)||(47041953-47042027)
chr7 (154-199)||(1418526-1418571)
chr7 (155-236)||(19302482-19302562)
chr7 (158-211)||(21073232-21073285)
chr7 (198-239)||(22940017-22940058)
chr7 (168-233)||(24895529-24895594)
chr7 (155-236)||(30535633-30535714)
chr7 (198-239)||(33678848-33678889)
chr7 (155-236)||(34035988-34036068)
chr7 (167-236)||(46825170-46825239)
chr7 (168-236)||(24973980-24974047)
chr7 (198-230)||(27863686-27863718)
chr7 (157-229)||(28727684-28727756)
[»] chr6 (39 HSPs)
chr6 (155-236)||(2460070-2460151)
chr6 (155-228)||(32205932-32206005)
chr6 (154-235)||(35070385-35070466)
chr6 (155-235)||(33089577-33089657)
chr6 (157-236)||(26559160-26559239)
chr6 (155-212)||(4325224-4325281)
chr6 (155-235)||(34538137-34538217)
chr6 (154-217)||(1432228-1432291)
chr6 (166-236)||(3180999-3181069)
chr6 (198-236)||(20368142-20368180)
chr6 (155-232)||(19752725-19752802)
chr6 (155-224)||(30536884-30536953)
chr6 (155-236)||(32171302-32171383)
chr6 (155-236)||(34403925-34404006)
chr6 (168-236)||(2455330-2455397)
chr6 (155-239)||(28005475-28005559)
chr6 (178-230)||(34544086-34544138)
chr6 (189-236)||(1669751-1669798)
chr6 (157-200)||(12111073-12111116)
chr6 (189-236)||(27693392-27693439)
chr6 (161-239)||(8146991-8147069)
chr6 (180-230)||(10353705-10353755)
chr6 (167-236)||(725586-725655)
chr6 (155-212)||(2457035-2457092)
chr6 (167-236)||(4080986-4081055)
chr6 (147-236)||(7945796-7945884)
chr6 (166-239)||(8348293-8348366)
chr6 (203-236)||(9559505-9559538)
chr6 (178-235)||(10031803-10031860)
chr6 (155-236)||(22743551-22743631)
chr6 (160-236)||(31338046-31338123)
chr6 (155-224)||(33068521-33068590)
chr6 (155-236)||(33737640-33737721)
chr6 (154-230)||(2458880-2458956)
chr6 (155-227)||(7901750-7901822)
chr6 (198-234)||(10645346-10645382)
chr6 (157-205)||(24973948-24973996)
chr6 (168-236)||(27857428-27857496)
chr6 (189-233)||(31668430-31668474)
[»] chr4 (48 HSPs)
chr4 (155-236)||(27123271-27123352)
chr4 (154-232)||(56186816-56186894)
chr4 (169-236)||(18628486-18628553)
chr4 (155-236)||(17822784-17822864)
chr4 (166-231)||(33534099-33534164)
chr4 (155-232)||(53315400-53315477)
chr4 (168-236)||(4691918-4691986)
chr4 (146-230)||(28615411-28615494)
chr4 (154-234)||(32421172-32421252)
chr4 (155-235)||(49940086-49940165)
chr4 (161-236)||(2996643-2996718)
chr4 (150-229)||(9720568-9720647)
chr4 (179-230)||(22471350-22471401)
chr4 (154-224)||(14011316-14011386)
chr4 (155-213)||(18512434-18512492)
chr4 (167-228)||(3549486-3549547)
chr4 (162-222)||(21469848-21469909)
chr4 (154-239)||(37575854-37575939)
chr4 (155-236)||(47399555-47399636)
chr4 (155-228)||(55870261-55870334)
chr4 (168-236)||(4071948-4072016)
chr4 (155-236)||(22662170-22662247)
chr4 (155-236)||(22666649-22666726)
chr4 (168-212)||(50298609-50298653)
chr4 (190-230)||(50742790-50742830)
chr4 (153-236)||(6428088-6428171)
chr4 (161-236)||(24091533-24091608)
chr4 (156-239)||(32831438-32831521)
chr4 (154-229)||(39178184-39178259)
chr4 (158-225)||(46859999-46860066)
chr4 (157-236)||(50746045-50746124)
chr4 (166-236)||(27725284-27725354)
chr4 (157-207)||(32420979-32421029)
chr4 (167-237)||(49003973-49004042)
chr4 (158-239)||(10365842-10365923)
chr4 (155-236)||(13126495-13126575)
chr4 (155-212)||(17975256-17975313)
chr4 (167-212)||(21157862-21157907)
chr4 (159-236)||(24087406-24087483)
chr4 (157-230)||(24160450-24160523)
chr4 (175-236)||(37863893-37863954)
chr4 (167-228)||(49939882-49939942)
chr4 (175-236)||(51560228-51560289)
chr4 (168-228)||(1554940-1555000)
chr4 (161-205)||(25487482-25487526)
chr4 (154-230)||(27122082-27122158)
chr4 (157-217)||(37636107-37636167)
chr4 (204-236)||(45214441-45214473)
[»] chr5 (29 HSPs)
chr5 (160-236)||(8090006-8090082)
chr5 (155-222)||(10638454-10638521)
chr5 (157-236)||(32849248-32849327)
chr5 (155-236)||(499650-499731)
chr5 (155-236)||(12459920-12460001)
chr5 (154-230)||(11104981-11105057)
chr5 (154-236)||(5377115-5377197)
chr5 (155-201)||(26004916-26004962)
chr5 (155-228)||(42646969-42647041)
chr5 (155-235)||(11297115-11297195)
chr5 (155-239)||(14599291-14599375)
chr5 (155-201)||(25705578-25705624)
chr5 (155-233)||(35135571-35135649)
chr5 (167-236)||(10125649-10125718)
chr5 (155-228)||(36639600-36639673)
chr5 (155-231)||(25720336-25720412)
chr5 (167-207)||(39257325-39257365)
chr5 (175-234)||(17259289-17259348)
chr5 (166-228)||(37968955-37969017)
chr5 (167-228)||(15015922-15015982)
chr5 (167-228)||(17258814-17258875)
chr5 (154-235)||(35960484-35960564)
chr5 (154-207)||(36796625-36796678)
chr5 (168-236)||(11095427-11095495)
chr5 (157-201)||(11615575-11615619)
chr5 (168-236)||(26796423-26796490)
chr5 (168-236)||(32172723-32172791)
chr5 (155-239)||(35445763-35445846)
chr5 (155-199)||(42034167-42034211)
[»] scaffold0050 (1 HSPs)
scaffold0050 (154-233)||(69742-69821)
[»] scaffold0020 (1 HSPs)
scaffold0020 (155-230)||(159892-159967)


Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 50212025 - 50211802
Alignment:
Q  16 caaattacagtttgtttggggcaccactatgtaccaccatgatgatcttccttttgatgtcccttgtttgccggatgtttatactcaatttcgtaaggca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50212025 caaattacagtttgtttggggcaccactatgtaccaccatgatgatcttccttttgatgtcccttgtttgccggatgtttatactcaatttcgtaaggca 50211926  T
Q  116 tggtatttcaattgacatgtgtatagatttatatggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgaga 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  50211925 tggtatttcaattgacatgtgtatagatttatatggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactgtttgaga 50211826  T
Q  216 gaacttatgaaaacaacttataac 239  Q
    ||||||||||||||||||||||||    
T  50211825 gaacttatgaaaacaacttataac 50211802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 31403504 - 31403426
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    |||| ||||| || |||||||||||||||||||| ||||| ||||||||||| |||||||||||| ||||  |||||||    
T  31403504 gattgacttacttgagcttatctactaacataagtacttgcaagactatttgggagaacttatgagaacagtttataac 31403426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 44295678 - 44295604
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 229  Q
    ||||| |||| |||| ||| ||||||||||| | ||||||||||||| | |||||||||||||||||||||||||    
T  44295678 tgtttagattgacttgtttgagcttatctacaagcataagcacttgtgatactatttgagagaacttatgaaaac 44295604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 44014717 - 44014798
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||  ||||||| || |||||||||| ||||| ||||||| ||||| ||||||| |||||||||||||| |||||    
T  44014717 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttat 44014798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 47132121 - 47132064
Alignment:
Q  179 tatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||  |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  47132121 tatctactagtataaccacatgtaagactatttgagagaacttatgaaaacaacttat 47132064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 21872214 - 21872271
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||| ||||| ||||    
T  21872214 tgtttggattaacttatttgatcttatctactgacataagcacttgtgagactgtttg 21872271  T

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Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 22667542 - 22667470
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||| |||||||||||| |||||||||||||| ||||| |||||||||  ||||| ||||| | ||||||    
T  22667542 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataac 22667470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 22724181 - 22724109
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||| |||||||||||| |||||||||||||| ||||| |||||||||  ||||| ||||| | ||||||    
T  22724181 cttatttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagcatataac 22724109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 1810102 - 1810047
Alignment:
Q  181 tctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||| ||||||| ||||||||||||||| |||| | |||||||||||    
T  1810102 tctactaacataatcacttgtgagactatttgagagagcttacggaaacaacttat 1810047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 25182909 - 25182987
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| | |||||||| |||||| ||||||   |||| |||||| ||||| ||||||||| ||||||||||||||||||    
T  25182909 tgtttggagtgacttatttgagcttacctacta---taagaacttgtgagactgtttgagagagcttatgaaaacaacttat 25182987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 2413598 - 2413672
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 229  Q
    |||||||||| |||||||| | || ||||| || ||||| |||||||||| || ||||||||| |||||||||||    
T  2413598 tgtttggatttacttatttgaactcatctattagcataatcacttgtaagtctgtttgagagagcttatgaaaac 2413672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 24158437 - 24158515
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    ||||||||  ||||||| |||||||||||| ||||||| |||||| | ||| |||| |||| |||||| ||||||||||    
T  24158437 tttggattggcttatttaagcttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaacaactta 24158515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 25925872 - 25925810
Alignment:
Q  163 ttaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 225  Q
    ||||||||||| | ||||||||||  ||||||||||||||| ||| ||| |||||||||||||    
T  25925872 ttaacttatttgaacttatctactggcataagcacttgtaacactgttttagagaacttatga 25925810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 36646300 - 36646382
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||  |||||||| ||| |||||| |  |||| ||||||||||||||||||| |||| |||||| |||| ||||||    
T  36646300 ttgtttggatcgacttatttaagcatatctattggcataggcacttgtaagactatttgggagagcttatggaaaccacttat 36646382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 41644369 - 41644443
Alignment:
Q  160 ggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactt 234  Q
    |||||||||| ||| ||||||||||||| ||||||||||||  | ||| |||  |||||||||| ||||||||||    
T  41644369 ggattaacttctttgagcttatctactagcataagcacttgagacactgtttaggagaacttataaaaacaactt 41644443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 47584577 - 47584523
Alignment:
Q  179 tatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    |||||| | |||||||||||||| ||||||||||||||| |||||||||| ||||    
T  47584577 tatctattgacataagcacttgtgagactatttgagagagcttatgaaaagaact 47584523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 2175804 - 2175849
Alignment:
Q  191 taagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||||||||||||||| |  |||||||||||||||||    
T  2175804 taagcacttgtaagactatttgagatagtttatgaaaacaacttat 2175849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 2304202 - 2304271
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| | || |||||||| ||||| ||||||| | |||||||||||||| |||||||| ||||||||    
T  2304202 cttatttgaactgatctactagcataaacacttgtgaaactatttgagagaaattatgaaagcaacttat 2304271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 11253652 - 11253571
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||| |||||||| || |||||||||| ||||||||||||  ||||| ||||  |||| |||| ||||||||||||    
T  11253652 tgtttgaattgacttatttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaacttat 11253571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 28828910 - 28828943
Alignment:
Q  205 actatttgagagaacttatgaaaacaacttataa 238  Q
    ||||||||||||||||||||||||||||||||||    
T  28828910 actatttgagagaacttatgaaaacaacttataa 28828943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 30573834 - 30573914
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||  |||||||| |||| ||||||| |||||||||||||| ||  | |||| |||||||||||||||||| ||||    
T  30573834 tgtttggatggacttatttgagct-atctactgacataagcacttgtgagtttgtttgtgagaacttatgaaaacaaattat 30573914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 19679260 - 19679328
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| || |||||||||| ||||||||||||  | | | |||||||||||||| |||||||||||||    
T  19679260 ttatttgagtttatctactagcataagcacttgcgaaaatctttgagagaacttacgaaaacaacttat 19679328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 24785412 - 24785332
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||||| | ||| |||  |||||||||  |||||| ||||    
T  24785412 tgtttggatcaacttattttagcttatctattgccataagcacttgtgacactgtttcggagaacttacaaaaacatctta 24785332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 45590804 - 45590732
Alignment:
Q  153 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 225  Q
    |||||||| ||| |||| ||| | ||||||||||| ||||||||||||| ||||| |||| |||| |||||||    
T  45590804 tttgtttgaattgacttttttgaacttatctactagcataagcacttgtgagactgtttgggagagcttatga 45590732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 8007584 - 8007623
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataa 193  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  8007584 ttgtttggattgacttattttagcttatctacttacataa 8007623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 24624339 - 24624280
Alignment:
Q  177 cttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||| ||||||||||||||| ||||  ||| |||||||||||| |||||    
T  24624339 cttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttat 24624280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 24625267 - 24625342
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||| ||| ||||||| ||||  |||||||||||||||| ||  |||||||| ||||| ||||||| ||||    
T  24625267 gattaacttgtttgagcttatttactggcataagcacttgtaaggctgattgagagagcttattaaaacaatttat 24625342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 49465586 - 49465665
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| |||||||| || |||| ||||| ||||||||||||| | | | |||  ||||||||||||||||| |||||    
T  49465586 tttggattgacttatttcagtttatttactaccataagcacttgtgatattgtttcggagaacttatgaaaacagcttat 49465665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 11041160 - 11041214
Alignment:
Q  170 attttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 224  Q
    |||| |||||||||||||| ||||||||||||  |||| ||||||||| ||||||    
T  11041160 atttgagcttatctactaagataagcacttgtgggactgtttgagagagcttatg 11041214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 37795744 - 37795667
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    |||||||| |||||||| |||||||| ||| |||||||  ||||||||||| ||||  || |||||| |||||||||||    
T  37795744 tttggattgacttatttaagcttatccactgacataagt-cttgtaagactgtttggaaggacttattaaaacaactta 37795667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 50760742 - 50760668
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 229  Q
    ||||| |||| |||||||| |||| |||||| | ||||||||||||| | ||   ||||||||||||||||||||    
T  50760742 tgtttagattgacttatttgagctcatctacaagcataagcacttgtgacaccgcttgagagaacttatgaaaac 50760668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 24684739 - 24684772
Alignment:
Q  153 tttgtttggattaacttattttagcttatctact 186  Q
    ||||||||||||||||||||| ||||||||||||    
T  24684739 tttgtttggattaacttatttgagcttatctact 24684772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 32663789 - 32663712
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 232  Q
    ||||||||||  ||||||| |||||||||||  ||| |  ||||||| |||||||||||||||  ||||| |||||||    
T  32663789 tgtttggattggcttatttgagcttatctaccgacaaatacacttgtgagactatttgagagagtttatggaaacaac 32663712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 34707449 - 34707494
Alignment:
Q  189 cataagcacttgtaagactatttgagagaacttatgaaaacaactt 234  Q
    ||||||| ||||| ||||| ||||||||||||| ||||||||||||    
T  34707449 cataagcgcttgtgagactgtttgagagaacttttgaaaacaactt 34707494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 39980880 - 39980800
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||  ||| ||| ||||||||||||| ||||||   |||| ||||| ||| |||||||||||||||||| |||||    
T  39980880 tgtttggattggcttgtttgagcttatctactagcataagtt-ttgtgagactgtttaagagaacttatgaaaacagcttat 39980800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 40240740 - 40240785
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttg 200  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||||||    
T  40240740 tgtttggattaacttatttgagcttatatactagcataaacacttg 40240785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 45541722 - 45541641
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| ||||||| || |   |||| ||||||||||||| |||   |||||||||||||||| |||||    
T  45541722 tgtttggattgacttatttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttat 45541641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 49845459 - 49845540
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| ||||||| |||||  ||||  |||| | | |||||||| |||| |||||| |||||||||||    
T  49845459 tgtttggattgacttatttgagcttatatactagtataaaaacttatgaaactatttgggagagcttatggaaacaacttat 49845540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 4534294 - 4534378
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||| |||| | |||||| |||||||||| | |||||||| ||||||| ||||||||  |||  ||||  ||||||||||||||    
T  4534294 tgtttcgattgatttatttgagcttatctattcacataagcccttgtaaaactatttggtagaggttatagaaacaacttataac 4534378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 9996002 - 9995935
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||||||| ||||||||||| ||||| ||| | |||||| ||||||||| | |||||||||||    
T  9996002 ttatttgagcttatgtactaacataaacacttctaacattatttg-gagaacttaaggaaacaacttat 9995935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 10217019 - 10216952
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||||||| ||||||||||| ||||| ||| | |||||| ||||||||| | |||||||||||    
T  10217019 ttatttgagcttatgtactaacataaacacttctaacattatttg-gagaacttaaggaaacaacttat 10216952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 24281197 - 24281117
Alignment:
Q  156 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||| |||| |||||||| ||  ||||||||   ||||||||||||  || | ||||||||| ||||||||||||||||||    
T  24281197 gtttagattgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttat 24281117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 35903086 - 35903158
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaa 227  Q
    |||||| ||| |||||||| || | ||| |||||||||||||||| | | ||| ||| |||||||||||||||    
T  35903086 tgtttgaattgacttatttgagttcatcaactaacataagcacttatgacactgtttcagagaacttatgaaa 35903158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 41724350 - 41724282
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| | |||||||||| ||||||| |||||| ||||  |||| || |||||||| |||||||||||    
T  41724350 ttatttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttat 41724282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 41848641 - 41848685
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaaga 205  Q
    |||| |||||||| || |||||||||||||||| |||||||||||    
T  41848641 gattgacttatttgagtttatctactaacataaacacttgtaaga 41848685  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 45535187 - 45535223
Alignment:
Q  203 agactatttgagagaacttatgaaaacaacttataac 239  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  45535187 agactatttgggagaacttatggaaacaacttataac 45535223  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 52323813 - 52323881
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttat 223  Q
    ||||| |||| ||||| || || | ||||||||||||||||||||| |||||| |||| |||| |||||    
T  52323813 tgtttagattgacttaattgagttgatctactaacataagcacttgcaagactgtttgtgagagcttat 52323881  T

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Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 9700152 - 9700071
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||| ||| ||||| ||| ||||    
T  9700152 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttat 9700071  T

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Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 2487927 - 2488011
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||||||  ||||||| || | ||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataac 2488011  T

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Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 4511168 - 4511099
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    |||| ||||||||||||||||   |||||||||||| |||||||| || |||||||||||||||||||||    
T  4511168 acttgttttagcttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaacaactta 4511099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 16162911 - 16162830
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||  ||||||| || |||||||||| ||||| ||||||| ||||| ||||||| |||||||||||||| |||||    
T  16162911 tgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttat 16162830  T

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Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 7853523 - 7853452
Alignment:
Q  162 attaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    |||||||||||||| ||| ||||||  |||||||||| || |||||||||| |||||||| |||||||||||    
T  7853523 attaacttattttaccttttctactggcataagcactagtgagactatttgggagaacttgtgaaaacaact 7853452  T

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Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 6526171 - 6526253
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 237  Q
    |||||||||| |||||||  ||| ||||||||  ||||||| ||||| ||| | |||||||||||||| ||||||||||||||    
T  6526171 tgtttggattgacttattcgagcctatctactggcataagcccttgtgagattgtttgagagaacttaggaaaacaacttata 6526253  T

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Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 26479936 - 26479855
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| |||||||||| | ||| ||| |||||| | |||||||| |||| |||||| |||||||||||    
T  26479936 tgtttggattgacttatttaagcttatctattgacacaaggacttgtgaaactatttgcgagagcttatggaaacaacttat 26479855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 43368619 - 43368700
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| | |||||||||||||||||||| |||| |||||  |||  | | ||||||||||||||||||    
T  43368619 tgtttggattgacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttat 43368700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 7918713 - 7918781
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| | ||||||||||| ||||| ||||||| ||||| |||| |||| ||||||||||||||||||    
T  7918713 ttatttaaacttatctactagcataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 239
Target Start/End: Complemental strand, 4560652 - 4560569
Alignment:
Q  156 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||||| |||||||| |||||||||| | |||||||||||||| ||  | ||||  |||||||||| ||| ||||||||||    
T  4560652 gtttggattgacttatttgagcttatctattgacataagcacttgtgaggttgtttggaagaacttatggaaataacttataac 4560569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 18331866 - 18331819
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgt 201  Q
    ||||||||||| |||||||| | |||||||||||||||||||||||||    
T  18331866 ttgtttggattgacttatttgatcttatctactaacataagcacttgt 18331819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 1821978 - 1821896
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    |||| ||| |||||||| ||||||  |||  |||||| ||||||||||||||||||  ||||||||||| |||| ||||||||    
T  1821978 tttgaattgacttatttgagcttagataccgacataaacacttgtaagactatttggaagaacttatgataacatcttataac 1821896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 1856423 - 1856341
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    |||| ||| |||||||| ||||||  |||  |||||| ||||||||||||||||||  ||||||||||| |||| ||||||||    
T  1856423 tttgaattgacttatttgagcttagataccgacataaacacttgtaagactatttggaagaacttatgataacatcttataac 1856341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 2483014 - 2482936
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    |||||| ||||| ||| ||||||||||| ||  |||||||| ||||| ||||| |||| ||||||||| ||||||||||    
T  2483014 tgtttgaattaatttaatttagcttatccacagacataagcccttgtgagactgtttgggagaacttaagaaaacaact 2482936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 35534543 - 35534612
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| ||||||||||||||||||||   |||| ||||| ||||||||||||| |||||||| |||||    
T  35534543 acttatttgagcttatctactaacataag-ttttgtgagactgtttgagagaacttgtgaaaacagcttat 35534612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 11376842 - 11376781
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||| |||||||||||| | |||||  ||||| |||||||||| |||||||||||||||    
T  11376842 cttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaa 11376781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 34771019 - 34770938
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| || |||||||| || |||||| ||| ||||||||||||| | ||| ||||||||| | |||||||||| |||||    
T  34771019 tgtttggtttgacttatttgagtttatctgctagcataagcacttgtgaaactgtttgagagatcctatgaaaacagcttat 34770938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 35928649 - 35928693
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcactt 199  Q
    ||||||||||  |||||||||||||||||||| ||||||||||||    
T  35928649 tgtttggattgtcttattttagcttatctactgacataagcactt 35928693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 3634609 - 3634664
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagag 216  Q
    |||| |||||||| ||||||||| || ||||| |||||||||||||| ||||||||    
T  3634609 gattgacttatttgagcttatctgctgacatatgcacttgtaagactgtttgagag 3634664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 8060821 - 8060739
Alignment:
Q  153 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||||| |||||||| ||| |||||| | |||||| |||||  || ||| ||||||||| ||||||||||||| ||||    
T  8060821 tttgtttggattgacttatttgagcatatctattgacataaacacttcgaa-actgtttgagagagcttatgaaaacaaattat 8060739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 14926900 - 14926963
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagaga 217  Q
    ||||||||||| |||||||| | ||||| ||||  ||||||||||||| ||||| |||||||||    
T  14926900 ttgtttggattgacttatttgaacttatttactggcataagcacttgtgagactgtttgagaga 14926963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 33553392 - 33553345
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgt 201  Q
    |||||||||||| ||||||| ||||||||||  |||||||||||||||    
T  33553392 ttgtttggattagcttatttgagcttatctatcaacataagcacttgt 33553345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 33940134 - 33940087
Alignment:
Q  190 ataagcacttgtaagactatttgagagaacttatgaaaacaacttata 237  Q
    |||||||||||| |||| |||||||||| |||||||||||| ||||||    
T  33940134 ataagcacttgtgagacaatttgagagagcttatgaaaacagcttata 33940087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 234
Target Start/End: Complemental strand, 34849255 - 34849176
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactt 234  Q
    |||| |||||| ||||||| |||||| |||||  |||||| |||| | ||||| |||| ||||||| |||||||||||||    
T  34849255 tgttcggattagcttatttgagcttagctactggcataagtacttttgagactgtttgggagaactaatgaaaacaactt 34849176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Original strand, 31884872 - 31884934
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||| ||||||||||||| ||||||||||||| ||| | |||| || ||||||| ||||||    
T  31884872 ttatttgagcttatctactagcataagcacttgtgagagtgtttgggaaaacttataaaaaca 31884934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 32976524 - 32976478
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgt 201  Q
    ||||||||||  ||||||| |||||||||||| ||||||||||||||    
T  32976524 tgtttggattcccttatttgagcttatctactgacataagcacttgt 32976478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 778540 - 778463
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 232  Q
    ||||||| || ||||||||   ||||| |||| | |||||||||||| ||||| ||||  ||||||||||||||||||    
T  778540 tgtttggtttgacttatttgtacttatttactgaaataagcacttgtgagactgtttgcaagaacttatgaaaacaac 778463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 29417542 - 29417611
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||||||||| ||  |||||| ||||||| || || ||||||||||  | ||||||||||||||    
T  29417542 cttattttagcttatcgaccgacataaacacttgtgaggctgtttgagagaaagtgtgaaaacaacttat 29417611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 30191072 - 30191141
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| || ||||||| |  ||||||||||||| ||||| |||| |||| |||||| |||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttat 30191141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 43717855 - 43717927
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||||  ||||||| |||||||||| | |||||||   |||| |||||||||| |||||||||||||||||    
T  43717855 tttggattggcttatttgagcttatctattgacataagtt-ttgtgagactatttgggagaacttatgaaaaca 43717927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 44236742 - 44236815
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||||||| ||||||| || |||||||||  ||||||||||||| ||||| || | |||||  ||||||||    
T  44236742 tgtttggattaccttatttgagtttatctactggcataagcacttgtgagactgttcgggagaatctatgaaaa 44236815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 10488622 - 10488562
Alignment:
Q  147 tatggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagact 207  Q
    ||||| ||||||||||||  ||||||| |||||||| |||||||||| ||| ||| |||||    
T  10488622 tatgggtttgtttggattggcttatttgagcttatcaactaacataaacacatgtgagact 10488562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 24326167 - 24326107
Alignment:
Q  170 attttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||| ||||||||||||  ||||||||||||| ||||| |||| |||| |||||| |||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaaca 24326107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 38436040 - 38436092
Alignment:
Q  178 ttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||||  |||||||||||||| || |||| ||| |||||||||||||||    
T  38436040 ttatctactggcataagcacttgtatgattattcgagtgaacttatgaaaaca 38436092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 239
Target Start/End: Complemental strand, 39049403 - 39049339
Alignment:
Q  175 agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||||||||| ||||| || |||| ||| | |||| || | |||||||||||||||||||||    
T  39049403 agcttatctactagcataaacatttgtgagattgtttgtgaaagcttatgaaaacaacttataac 39049339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 43045644 - 43045723
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    ||||||||||  ||||||| ||||||||||||| |||||| | |||| ||||| |||  |||| |||||||||||| ||||    
T  43045644 tgtttggattggcttatttaagcttatctactagcataag-atttgtgagactgttttggagatcttatgaaaacagctta 43045723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 43504890 - 43504822
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    ||||||| ||||||||||||  | |||||||||||  |||| |||  ||||||| ||||||||||||||    
T  43504890 cttatttaagcttatctactggcttaagcacttgtgtgactgtttcggagaactgatgaaaacaactta 43504822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 154 - 239
Target Start/End: Complemental strand, 19978099 - 19978014
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||||||| ||||||||||| ||||||| ||| |||||||||||  ||||| |||||||||||||||  ||||||||||||||    
T  19978099 ttgtttggattcacttattttagtttatctattaaaataagcacttgcgagactgtttgagagaacttatagaaacaacttataac 19978014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 31982450 - 31982370
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    ||||||| || |||||||| |||||| |||||||||||||||| ||| | |||||||| ||||||||||||||||| ||||    
T  31982450 tgtttgggttgacttatttaagcttacctactaacataagcacctgtgacactatttgggagaacttatgaaaacagctta 31982370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 3973693 - 3973612
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| |||||||| ||| | |||||||||| ||||||| ||||||||| | |||| |||||||||||    
T  3973693 tgtttggattcacttatttgagcttatccactgatataagcacttataagactgtttgagagagcatatggaaacaacttat 3973612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 8017585 - 8017504
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| || ||||||| | ||||||||||||||  || |||||| ||||||||||||||||| |||||    
T  8017585 tgtttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagcttat 8017504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 13867029 - 13866952
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 232  Q
    |||||||||| || ||||| ||||||||||||  ||||| ||||||| ||||| |||||||||||||| |||||||||    
T  13867029 tgtttggattgacctatttgagcttatctactgccataaacacttgtgagactgtttgagagaacttaagaaaacaac 13866952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 22878249 - 22878168
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| |||||||| ||| |||||||||||||| ||||| |||| |||| |||||| |||||| ||||    
T  22878249 tgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaacaaattat 22878168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 4350843 - 4350760
Alignment:
Q  153 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||  ||||||| ||||| |||||| ||||||||||||   ||| | |||||||||||||||||||||| |||||    
T  4350843 tttgtttggattggcttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaacagcttat 4350760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 28803451 - 28803530
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| |||||||| |||||||||||   ||||||||| ||| ||||| ||||||||||| |||| |||||||||||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttat 28803530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 36677805 - 36677722
Alignment:
Q  154 ttgtttggattaacttattttagcttatctacta-acataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||||||||||||| || ||||||| |  |||||||||||||| ||||||||  ||||| |||||||||||| |||||    
T  36677805 ttgtttggattaacttatttgagtttatctatttgacataagcacttgtgagactattcaagagagcttatgaaaacagcttat 36677722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 27317530 - 27317450
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| |||||||||||  |||||||   || | ||||| ||||||||||||||||||||||||||||    
T  27317530 tgtttggattgacttatttgagcttatctaccgacataagtt-ttatgagactgtttgagagaacttatgaaaacaacttat 27317450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 39622098 - 39622021
Alignment:
Q  159 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| |||||||| | ||||||||||   |||||||||||  | ||| ||||||||||||||||||||||||||||    
T  39622098 tggatttacttatttgaacttatctacttgtataagcacttgcgacactgtttgagagaacttatgaaaacaacttat 39622021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 41170761 - 41170688
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||||||  ||||||| || |||||||||||||||| ||||||| ||||||||||  | ||||||||||||    
T  41170761 tgtttggattggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaaa 41170688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 43456627 - 43456704
Alignment:
Q  156 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    ||||||||| |||||||| | ||||| |||| |||||| ||||||||||||| ||||| ||| ||| |||||||||||    
T  43456627 gtttggatttacttatttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaact 43456704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 11514048 - 11513972
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||||||   |||||| || |||||||||| ||||||||||||| ||||| ||| ||||| ||||||||||||    
T  11514048 ttgtttggattggtttatttgagattatctactagcataagcacttgtgagactgttttagagagcttatgaaaaca 11513972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 225
Target Start/End: Original strand, 13869050 - 13869097
Alignment:
Q  178 ttatctactaacataagcacttgtaagactatttgagagaacttatga 225  Q
    ||||||||| |||||||||||| | |||||||||||||||||||||||    
T  13869050 ttatctactgacataagcacttatgagactatttgagagaacttatga 13869097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 17775389 - 17775460
Alignment:
Q  159 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||||||||||| ||| |||||||| |||||||| ||| ||||||| ||||||||   |||||||||||    
T  17775389 tggattaacttatttgagcatatctactgacataagctcttttaagactgtttgagagggtttatgaaaaca 17775460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 30331903 - 30331830
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||||||| |||||||| |||||||||||| |||||||   |||| ||||| |||| |||||||||||||||    
T  30331903 ttgtttggattgacttatttcagcttatctactgacataag-ttttgtgagactgtttgggagaacttatgaaaa 30331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 2964728 - 2964809
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||||||||| | |||||||||   ||||| ||||||  ||| | |||||| ||||||||||||||| |||||    
T  2964728 tgtttggattaacttatttgaacttatctaccggcataaacacttgcgagaatgtttgagtgaacttatgaaaacagcttat 2964809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 4607076 - 4606996
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||  ||||||| ||||||||||| || |||||   |||| |||||||||| |||||||| ||||||||||||||    
T  4607076 tgtttggattggcttatttgagcttatctaccaatataagtt-ttgtgagactatttgggagaacttgtgaaaacaacttat 4606996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 6548040 - 6547971
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 224  Q
    |||||||||| |||||||  ||||||||||||| |||||| |||||| ||||| |||||| || ||||||    
T  6548040 tgtttggattgacttattcaagcttatctactagcataagaacttgtgagactgtttgagggagcttatg 6547971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 24098235 - 24098190
Alignment:
Q  171 ttttagcttatctactaacataagcacttgtaagactatttgagag 216  Q
    |||||||||||||| || ||||||||||||||| ||||||||||||    
T  24098235 ttttagcttatctagtagcataagcacttgtaaaactatttgagag 24098190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 40077430 - 40077511
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||| |||||| | ||||||| |||| |||||||||||| ||||||| ||||||| |   ||||||||||||||||    
T  40077430 tgtttgaattgacttatctgagcttatgtactgacataagcacttctaagactctttgagaaagactatgaaaacaacttat 40077511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 40776020 - 40776097
Alignment:
Q  159 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||||| || || |||||||||||||||||||||| |||  || ||||  |||||||||||||||| |||||    
T  40776020 tggattgacttacttgagtttatctactaacataagcacttataaacctgtttggaagaacttatgaaaacagcttat 40776097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 24347872 - 24347792
Alignment:
Q  157 tttggattaacttatttt-agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||  |||||||| ||| | ||||||  |||||| |||||| ||||||||| ||||||||||||||| ||||||||    
T  24347872 tttggattggcttattttgagcctttctactcgcataagtacttgtgagactatttcagagaacttatgaaagcaacttat 24347792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 29430896 - 29430836
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    |||||| |||||||||||| |||||| |||||||  |||||||||  ||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaa 29430836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 43808668 - 43808628
Alignment:
Q  196 acttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  43808668 acttgtaagactatttgagagagcttatgaaaataacttat 43808628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 9478444 - 9478369
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||| |||||||| | ||||||||| |||||||| ||||||  |||| |||||||||  ||||| |||||||||||    
T  9478444 gattgacttatttgaacttatctaccaacataagtacttgtgtgactgtttgagagagtttatgcaaacaacttat 9478369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 18179100 - 18179061
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataag 194  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  18179100 tgtttggattgacttatttgagcttatctactaacataag 18179061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 30990358 - 30990401
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcact 198  Q
    ||||||||||  ||||||| ||||||||||||||||||||||||    
T  30990358 tgtttggattggcttatttgagcttatctactaacataagcact 30990401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 40158867 - 40158788
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||  ||||||| ||| |||||||| ||||||| |||||| |||||  ||| | ||||||||||||||| |||||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttat 40158788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 43530042 - 43530105
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||| |||| ||||||||||||| |||||||| ||| |  ||| |||||||||||||||||    
T  43530042 cttatttgagctaatctactaacatatgcacttgtgagagtgcttgggagaacttatgaaaaca 43530105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 787484 - 787402
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||||   |||||  ||| ||||||||  ||||||||||||| | ||| |||| ||||||||||||||||| |||||    
T  787484 ttgtttggattggattattcgagcatatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttat 787402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 15120339 - 15120253
Alignment:
Q  150 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||| |||||||||| |||||||| | ||||||||||| ||||| || |||| |  || |||| |||| |||||| |||||||||||    
T  15120339 ggatctgtttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttat 15120253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 28677573 - 28677659
Alignment:
Q  150 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||| |||||||||| | || ||| ||||||| ||||  |||||| |||  ||||||| |||| ||||||||||||||||| |||||    
T  28677573 ggatctgtttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagcttat 28677659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 33981270 - 33981200
Alignment:
Q  159 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 229  Q
    ||||||| ||||||| |||||| |||||| | ||||||||||| ||||| | ||| | |||||||||||||    
T  33981270 tggattagcttatttgagcttacctactagcttaagcacttgtgagactgtctgaaaaaacttatgaaaac 33981200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 43811262 - 43811180
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||| | |||||| | ||||||||||| |  |||||||||| | ||| ||||||| | |||||| |||||||||||    
T  43811262 ttgtttggattgatttatttaatcttatctactagctcaagcacttgtgatactgtttgagaaaccttatggaaacaacttat 43811180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 227
Target Start/End: Complemental strand, 1626009 - 1625980
Alignment:
Q  198 ttgtaagactatttgagagaacttatgaaa 227  Q
    ||||||||||||||||||||||||||||||    
T  1626009 ttgtaagactatttgagagaacttatgaaa 1625980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 3078527 - 3078584
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    |||||||||| |||||||| ||||||||||| |||| || ||||||| | ||||||||    
T  3078527 tgtttggattgacttatttgagcttatctaccaacacaaacacttgtcaaactatttg 3078584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 4326315 - 4326374
Alignment:
Q  155 tgtttggattaacttattttagcttat---ctactaacataagcacttgtaagactattt 211  Q
    |||||||||| |||||||| |||||||   |||||  |||||||||||||||||||||||    
T  4326315 tgtttggattgacttatttgagcttattatctactgtcataagcacttgtaagactattt 4326374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 9996889 - 9996808
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| || |||||||| |||||||| |||| |||||| |||||| |||||  ||| |||| |||||  |||||||||||    
T  9996889 tgtttggcttgacttatttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttat 9996808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 12313092 - 12313173
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| |||| ||||||| | |||| | |||| ||||||||||||| ||| | |||| ||||| ||||||||||| |||||    
T  12313092 tgtttgtattagcttatttgatcttacccactagcataagcacttgtgagattgtttgggagaatttatgaaaacagcttat 12313173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 15370242 - 15370299
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    |||||||||| |||||||| ||||||||||||  |||||||| |||| ||||| ||||    
T  15370242 tgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttg 15370299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 25609935 - 25609866
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| |||||||||||||||||||| |||||| |||||  |||  | | |||||| |||||||||||    
T  25609935 cttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttat 25609866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 32837439 - 32837390
Alignment:
Q  190 ataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||| |||||| ||||| |||| ||||||||||||||||| ||||||||    
T  32837439 ataagtacttgtgagactgtttgggagaacttatgaaaacagcttataac 32837390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 37276895 - 37276838
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    |||||||||  |||||||| || ||||||||||| |||||||||||| ||||| ||||    
T  37276895 tgtttggatcgacttatttaagtttatctactaatataagcacttgtgagactgtttg 37276838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 19629464 - 19629428
Alignment:
Q  203 agactatttgagagaacttatgaaaacaacttataac 239  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  19629464 agactatttgggagaacttatggaaacaacttataac 19629428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 19826365 - 19826329
Alignment:
Q  203 agactatttgagagaacttatgaaaacaacttataac 239  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  19826365 agactatttgggagaacttatggaaacaacttataac 19826329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 38076992 - 38077072
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    ||||| |||| || ||||| ||||| |||| | |||||| ||||||| ||| | ||||||||||||| | |||||||||||    
T  38076992 tgtttcgattgacatatttgagcttttctattcacataaacacttgtgagattgtttgagagaacttcttaaaacaactta 38077072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 40759311 - 40759259
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagact 207  Q
    ||||||||||  ||||||| |||||||||| | |||||||||||||| |||||    
T  40759311 tgtttggattgccttatttgagcttatctattgacataagcacttgtgagact 40759259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 44606062 - 44606110
Alignment:
Q  188 acataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| ||||||| |||| ||||  ||||||||||||||||||||||    
T  44606062 acataagtacttgtacgactgtttggaagaacttatgaaaacaacttat 44606110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 6659830 - 6659754
Alignment:
Q  156 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 232  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||| || | ||||||| ||||||    
T  6659830 gtttggattgacttattttagcttatctactagcataagcacttgtgagactatttgggatagcttatgataacaac 6659754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 10199330 - 10199400
Alignment:
Q  158 ttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| | |||||||| ||||||| |||||||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaa 10199400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 50644173 - 50644253
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    ||||||||||| |||||||| |||||||||||||||||| |   |||| ||||| |||| ||||||||||||||||||||||    
T  50644173 ttgtttggattgacttatttgagcttatctactaacatatg-ttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 4757487 - 4757408
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||| || |||||||| |||||||||| | |||||| ||||||| |||| |||||  ||||||||||||||||||||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgagaccatttggcagaacttatgaaaacaacttat 4757408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 18327067 - 18327146
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||  ||||||| ||||||||||||  ||||||||||| | | ||||||||  ||||||||||||||||||||||    
T  18327067 tttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaacaacttat 18327146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 32515360 - 32515435
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||||||| | ||||| || |||||||||||||||||||||||| ||||| |||| |||| |||||| |||||    
T  32515360 tgtttggattagcatatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaaca 32515435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 51929383 - 51929462
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| |||| ||| |||||||||||| |||||||||| ||| | ||| ||| |||||||||||||||||| |||||    
T  51929383 tttggattgacttttttgagcttatctactgacataagcacctgtgacactgtttaagagaacttatgaaaacagcttat 51929462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 16980943 - 16980874
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    |||||||| | ||||| ||| |||||||| |||||| ||||||||||||||| |||||| ||||||||||    
T  16980943 acttatttgaacttatataccaacataagtacttgtgagactatttgagagagcttatggaaacaactta 16980874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 9602575 - 9602630
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    |||||||| |||||| | ||||||||||||||| ||||||||||| ||||||||||    
T  9602575 tttggattgacttatctgagcttatctactaacttaagcacttgtgagactatttg 9602630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 15581403 - 15581324
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| || |||||||||||||||||||| |||||||||||||| ||| | ||||  ||| || ||| |||||||||||    
T  15581403 tttggaatagcttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttat 15581324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 6292645 - 6292599
Alignment:
Q  153 tttgtttggattaacttattttagcttatctactaacataagcactt 199  Q
    |||||||||||| |||||||| |||||||||||| ||||||||||||    
T  6292645 tttgtttggattgacttatttgagcttatctactgacataagcactt 6292599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 6557112 - 6557051
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    |||||||| | ||||||||||||||||||   |||| ||||||||||||||||||||||||||    
T  6557112 acttatttgaacttatctactaacataagtt-ttgtgagactatttgagagaacttatgaaaa 6557051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 28075844 - 28075774
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| |||||||||||||| ||||| |||||| || || ||||||  ||||| ||||||||||||||    
T  28075844 acttatttgagcttatctactaatataagaacttgtgaggctgtttgagttaacttgtgaaaacaacttat 28075774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 31517671 - 31517737
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    ||||||| ||||||| ||||  ||||||||||||| ||||| |||| |||||||||| |||||||||    
T  31517671 cttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaact 31517737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 601191 - 601110
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| ||||| || |||||||||  |||||||||||||| | ||||| |||| |||||  || |||||||||||||    
T  601191 tgtttggattgacttacttgagcttatctgataacataagcacttttgagactgtttgggagaatctaagaaaacaacttat 601110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 4200379 - 4200303
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 237  Q
    |||| ||||||||||| |||| |||| | ||||||| |||| ||||| |||| |||| || ||||||||||||||||    
T  4200379 gattgacttattttagtttatatactgatataagcatttgtgagactgtttgtgagagctaatgaaaacaacttata 4200303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 24417655 - 24417735
Alignment:
Q  156 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||| |||||||| || ||||||| ||| ||||| |||||| ||||||||||| ||||  | | ||||||||||||    
T  24417655 gtttggattgacttatttgagtttatctattaatataagtacttgtgagactatttgaaagaatgtgtaaaaacaacttat 24417735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 33975727 - 33975679
Alignment:
Q  153 tttgtttggattaacttattttagcttatctactaacataagcacttgt 201  Q
    ||||||||| || |||||||| |||||||||||||||| ||||||||||    
T  33975727 tttgtttgggttcacttatttgagcttatctactaacacaagcacttgt 33975679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 36070298 - 36070250
Alignment:
Q  189 cataagcacttgtaagactatttgagagaacttatgaaaacaacttata 237  Q
    ||||||||||||| ||||| |||  ||||||||||||||||||||||||    
T  36070298 cataagcacttgtgagactgtttaggagaacttatgaaaacaacttata 36070250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 201
Target Start/End: Complemental strand, 2832120 - 2832077
Alignment:
Q  158 ttggattaacttattttagcttatctactaacataagcacttgt 201  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||    
T  2832120 ttggattagcttatttgagcttatctactagcataagcacttgt 2832077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 11217944 - 11218015
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 237  Q
    |||||||| |||| ||||||| |||| ||||||||| ||||  |||| |||||||  |||||||||||||||    
T  11217944 acttatttgagctaatctactgacatgagcacttgtgagacggtttgggagaactggtgaaaacaacttata 11218015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 14737658 - 14737729
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    |||||| ||||||| |||||  |||||||||||| ||||| |||| || ||||| |||||| ||||||||||    
T  14737658 ttatttgagcttatttactagaataagcacttgtgagactgtttgggaaaacttgtgaaaataacttataac 14737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 33723301 - 33723376
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||||| |||||||| | ||||||||||| ||||| ||||||| |||||  ||| || |||||||| |||||    
T  33723301 tgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaaca 33723376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 43371844 - 43371891
Alignment:
Q  189 cataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||| ||||| ||||||||| |||||||||||| |||||    
T  43371844 cataagcacttgtgagactgtttgagagagcttatgaaaacagcttat 43371891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 49282635 - 49282712
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||| ||||||| || || ||||||||||||| ||||||| ||||||| ||| ||| |||||||||||| |||||    
T  49282635 tttggattagcttatttgag-ttgtctactaacataaacacttgtgagactatctga-agagcttatgaaaacagcttat 49282712  T

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Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 8382459 - 8382417
Alignment:
Q  188 acataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||    
T  8382459 acataagcatttgtgagactctttgagagaacttatgaaaaca 8382417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 26866464 - 26866390
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 229  Q
    |||||||||| |||||||| |||||||||||||||| ||  |||| | ||||||||||  ||| |||||| ||||    
T  26866464 tgtttggattgacttatttcagcttatctactaacacaaatacttctgagactatttggaagagcttatggaaac 26866390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 42336731 - 42336685
Alignment:
Q  190 ataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||  |||| ||||||| ||||||||||||||||||||    
T  42336731 ataagcacttgtgcgactgtttgagataacttatgaaaacaacttat 42336685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 1662712 - 1662643
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| ||||||||||||| |||||| || ||  |||||||||| |||| |||| | |||||||||||    
T  1662712 cttatttgagcttatctactagcataagtacatgcgagactatttgcgagagcttacggaaacaacttat 1662643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 4180651 - 4180720
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttat 223  Q
    ||||||||||||||||| ||| |||||| ||||  ||||| ||||||| ||| |||||| |||| |||||    
T  4180651 ttgtttggattaacttacttttgcttatttacttgcataaccacttgtcagattatttgtgagagcttat 4180720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 28837284 - 28837352
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| |||||||||||| |||||||||||||  ||||| ||| |||| ||||| ||||||| |||||    
T  28837284 cttatttgagcttatctactgacataagcacttgagagactgtttaagag-acttacgaaaacagcttat 28837352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 29793619 - 29793672
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatt 210  Q
    |||| ||| |||||||| |||||||||||| |||||| ||||||| ||||||||    
T  29793619 tttgtattgacttatttgagcttatctactgacataaacacttgtgagactatt 29793672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 43420409 - 43420328
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||| |||||| ||||||| |||||||||||  |||||| ||||||| |||||  ||| |||| |||||| ||||| |||||    
T  43420409 tgttaggattagcttatttgagcttatctacagacataaacacttgtgagactgcttgtgagatcttatggaaacagcttat 43420328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 6279539 - 6279475
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||| |||||| ||||| ||||||||||||||  | || ||||||||| |||||| |||||    
T  6279539 acttatttcagcttaactactgacataagcacttgtgtggctgtttgagagagcttatggaaaca 6279475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 7252541 - 7252609
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 225  Q
    |||| |||| ||||||| |||| ||||||||||||||| |||||  | ||| |||| ||||||||||||    
T  7252541 tttgaattagcttatttgagctaatctactaacataagtacttgagaaactgtttgggagaacttatga 7252609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 40485717 - 40485773
Alignment:
Q  180 atctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| |||||||||||||| ||||| |||| ||||||||||  ||||| |||||    
T  40485717 atctacttacataagcacttgtgagactgtttgggagaacttattgaaacatcttat 40485773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 223
Target Start/End: Complemental strand, 44217502 - 44217454
Alignment:
Q  175 agcttatctactaacataagcacttgtaagactatttgagagaacttat 223  Q
    |||||||||||| || ||||||||||||||||| |||| |||| |||||    
T  44217502 agcttatctactgacgtaagcacttgtaagactttttgggagagcttat 44217454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 49173499 - 49173463
Alignment:
Q  192 aagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    |||||||||| |||||||||||||||||||| |||||    
T  49173499 aagcacttgtgagactatttgagagaacttacgaaaa 49173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 194
Target Start/End: Complemental strand, 50725372 - 50725336
Alignment:
Q  158 ttggattaacttattttagcttatctactaacataag 194  Q
    |||||||||||||||||||||||||||| || |||||    
T  50725372 ttggattaacttattttagcttatctacgaaaataag 50725336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 8094445 - 8094376
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||| |||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaacagcttat 8094376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 23215006 - 23214925
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| | ||||||||||| ||||| ||||| | ||||| |||||||||| |||||||||||||||||    
T  23215006 tgtttggattgacttatttgaccttatctactagcataaacacttatgagactgtttgagagaatttatgaaaacaacttat 23214925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 33894778 - 33894703
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||||||| ||||||| |||||||| | | |||||||||||||| ||||| |||| |||| ||||||||||||    
T  33894778 tgtttggattagcttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaaca 33894703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 25670516 - 25670586
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||| || |||||||||| | |||||||| ||||| ||||| ||||||| ||||||||||||||||||||    
T  25670516 acttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttat 25670586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 4970711 - 4970791
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| |||||||||  | |||||||  ||||| ||||| |||| |||||||||||||||||||||||    
T  4970711 tgtttggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgggagaacttatgaaaacaacttat 4970791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 30748953 - 30749029
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaa 231  Q
    |||||| ||| | |||||| |||||||||||| ||||||||   ||| ||||| |||||||||||||||||||||||    
T  30748953 tgtttgaattgagttatttgagcttatctactgacataagccaatgtgagactgtttgagagaacttatgaaaacaa 30749029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 30751670 - 30751602
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttat 223  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||  |||| |||| |||| |||||    
T  30751670 tgtttggattaacttatttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttat 30751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 46091742 - 46091662
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 237  Q
    ||||||||||||||||| |||| ||||| ||  ||||||| |||| |||||| |||| |||||||||||||| || |||||    
T  46091742 tttggattaacttatttgagctcatctaatagtataagcatttgtgagactaattgatagaacttatgaaaataatttata 46091662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 529510 - 529443
Alignment:
Q  158 ttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 225  Q
    ||||||| |||||||| ||||||||||||  ||||| ||||||| || ||||||| ||||||||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgaggctatttgggagaacttatga 529443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 13960648 - 13960726
Alignment:
Q  160 ggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||| |||||||| |||||||| | |  ||||||||||||  ||||||||||||||| |||||||||||| ||||||||    
T  13960648 ggattgacttatttgagcttatccattg-cataagcacttgcgagactatttgagagagcttatgaaaacagcttataac 13960726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 8427162 - 8427084
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    |||||||| | |||||| |||||||||||||||||||| |||||| ||||| |||| | || | |||| ||||||||||    
T  8427162 tttggattgatttatttgagcttatctactaacataagtacttgtgagactgtttgggggagcctatggaaacaactta 8427084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 28691755 - 28691835
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| || |||||| |||||||||||| |||| ||||| || | |||| |||||||||||| |||||    
T  28691755 tgtttggattgacttatttgagtttatctgctaacataagcatttgtgagactgttcg-gagatcttatgaaaacagcttat 28691835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 29363664 - 29363607
Alignment:
Q  150 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagact 207  Q
    |||| ||||||||||  ||||||| | ||||||||||||||||||||||||| |||||    
T  29363664 ggatctgtttggattggcttatttgaacttatctactaacataagcacttgtgagact 29363607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 43854972 - 43855037
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 232  Q
    ||||||| | |||||||||||||||||||| |||  | |||||||| |||| ||||||||||||||    
T  43854972 cttatttgaacttatctactaacataagcatttgcgacactatttgggagagcttatgaaaacaac 43855037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 44151406 - 44151471
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaa 231  Q
    |||||||| | ||||| |||| ||||||| |||||| ||| ||||||||||| |||||||||||||    
T  44151406 acttatttgaacttatatactgacataagtacttgtgagattatttgagagagcttatgaaaacaa 44151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 2825168 - 2825236
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| |||||||||||| | |||||||||||| ||||| ||||  ||||||||||||| || |||||    
T  2825168 ttatttgagcttatctacttatataagcacttgtgagactctttggaagaacttatgaaaccatcttat 2825236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 753108 - 753045
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||| ||||||||||||  ||||||||| | |||||||  |||| ||||||||||||||||    
T  753108 cttatttgagcttatctacttgcataagcacctctaagactgattgaaagaacttatgaaaaca 753045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 3836604 - 3836675
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||||  ||||||| ||||||||||||  | ||||||||||| | ||| |||| |||||||||||||||    
T  3836604 tttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaa 3836675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 30496842 - 30496775
Alignment:
Q  169 tattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||| || |||||||||| ||||||| ||||  |||||| |||||||| |||||||||||| |||||    
T  30496842 tatttgagtttatctactagcataagcccttgcgagactacttgagagagcttatgaaaacagcttat 30496775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 17942222 - 17942144
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    |||||||| | |||| ||| ||||||||||||   |||| ||| ||| ||||| | |||||||||||||||||||||||    
T  17942222 tgtttggaatgacttgtttgagcttatctactgcaataaacacctgtgagactgtctgagagaacttatgaaaacaact 17942144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 17988951 - 17988997
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttg 200  Q
    |||||||||||||||||||| ||||||||||||  ||||| ||||||    
T  17988951 ttgtttggattaacttatttgagcttatctactcgcataatcacttg 17988997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 22387814 - 22387896
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||| ||||| |  | ||||| |||| |||||| ||| ||| ||||| |||| |||| ||||||||||||||||||    
T  22387814 ttgtttggattgacttactagaacttatttactgacataaacacgtgtgagactgtttgggagagcttatgaaaacaacttat 22387896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 25659805 - 25659843
Alignment:
Q  156 gtttggattaacttattttagcttatctactaacataag 194  Q
    |||||||||||||||||| || |||||||||||||||||    
T  25659805 gtttggattaacttatttgagattatctactaacataag 25659843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 47041953 - 47042027
Alignment:
Q  150 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 224  Q
    ||||||||||||||| |||||||| ||| |||||| | |||| | ||||||| ||||| |||| |||| ||||||    
T  47041953 ggatttgtttggattgacttatttgagcatatctattgacattaacacttgtgagactttttgtgagagcttatg 47042027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 1418571 - 1418526
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcactt 199  Q
    ||||||||||| |||||||| ||||||||||||  |||||||||||    
T  1418571 ttgtttggattgacttatttgagcttatctactggcataagcactt 1418526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 19302482 - 19302562
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||| |||||||| |||||||||||| |||||||   |||| ||| |||||| ||||| ||||||||||| |||||    
T  19302482 tgtttgaattgacttatttgagcttatctactgacataag-ttttgtgagaatatttgggagaatttatgaaaacagcttat 19302562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 21073285 - 21073232
Alignment:
Q  158 ttggattaacttattttagcttatctactaacataagcacttgtaagactattt 211  Q
    |||||||  ||||||| |||||||||||| ||||||||| |||| |||||||||    
T  21073285 ttggatttgcttatttaagcttatctactgacataagcaattgtgagactattt 21073232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 22940017 - 22940058
Alignment:
Q  198 ttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    |||| ||||||||||  |||||||||||||||||||||||||    
T  22940017 ttgtgagactatttggaagaacttatgaaaacaacttataac 22940058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 24895594 - 24895529
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    |||||||| ||||| || | |||||||||||| | |||| | |||||||||||||||||| |||||    
T  24895594 ttattttaacttatatattgacataagcacttatgagaccacttgagagaacttatgaaatcaact 24895529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 30535714 - 30535633
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||| |||||||| || | || |||| |||||| ||||||  ||||| |||  |||||||||||||||||||||||    
T  30535714 tgtttgaattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttat 30535633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 33678889 - 33678848
Alignment:
Q  198 ttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    |||| |||| ||||| ||||||||||||||||||||||||||    
T  33678889 ttgtgagacaatttgggagaacttatgaaaacaacttataac 33678848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 34036068 - 34035988
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||| |||||||| |||||||||||| ||||| | | |||| |||||| |||  |||||||||||||| |||||||    
T  34036068 tgtttgaattgacttatttgagcttatctactgacatatgta-ttgtgagactacttggaagaacttatgaaaataacttat 34035988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 46825239 - 46825170
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| | |||||| |||| ||||||  |||||||||||||||| ||||| |||||  ||||||||||    
T  46825239 cttatttgaacttatcgactaccataaggtcttgtaagactatttgggagaaattatgggaacaacttat 46825170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 24974047 - 24973980
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| |||||||||| |||| | || |||||| ||||| |||| |||||||||||| ||||||||||    
T  24974047 ttatttgagcttatcta-taacttgagtacttgtgagactgtttgggagaacttatgataacaacttat 24973980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 27863686 - 27863718
Alignment:
Q  198 ttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||| ||||||||||||||||||||||||||||    
T  27863686 ttgtgagactatttgagagaacttatgaaaaca 27863718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 28727684 - 28727756
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 229  Q
    ||||||||||||||||| |||||||||  | || |||| |||||  ||||| ||||||||| |||||| ||||    
T  28727684 tttggattaacttatttgagcttatcttttgacctaagaacttgcgagactgtttgagagagcttatggaaac 28727756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 2460070 - 2460151
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||||||||| |||||||  |||| |||||| |||||| ||||| ||||||||| |||||| |||||||||||    
T  2460070 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttat 2460151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 32205932 - 32206005
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    |||||||||| |||||||| | ||||||||||| |||||| |||| |||| || ||||||||||||||||||||    
T  32205932 tgtttggattgacttatttgaccttatctactagcataagtacttataaggctttttgagagaacttatgaaaa 32206005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 35070385 - 35070466
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||||  |||| |||| ||||||  ||||||||| ||||    
T  35070385 ttgtttggattttcttatttgagcttatctactaacataagcacttgtgggactgtttgggagaacaaatgaaaacagctta 35070466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 33089657 - 33089577
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    ||||||| || |||||||| |||||||||||| ||||| | | |||| ||||||||| |||||||||||||||||| ||||    
T  33089657 tgtttgggttgacttatttgagcttatctactgacatatgtatttgtgagactatttcagagaacttatgaaaacagctta 33089577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 26559160 - 26559239
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||||||| || ||| |||||  |||||||| |||| ||||| ||||  ||||||||||||||||||||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttat 26559239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 4325224 - 4325281
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    |||||||||| ||| ||||||| |||||||||||||||| ||||||| ||||||||||    
T  4325224 tgtttggattgactaattttagtttatctactaacataaacacttgtgagactatttg 4325281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 34538137 - 34538217
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    |||||| ||| ||| |||||  |||||||||| | |||||||||||| ||||||||||||||| ||||| |||||| ||||    
T  34538137 tgtttgaattgactcattttttcttatctactcatataagcacttgtgagactatttgagagatcttataaaaacagctta 34538217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 1432291 - 1432228
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagaga 217  Q
    |||||||||||   ||||||||||||||||||| ||||||||| |||| ||||| |||||||||    
T  1432291 ttgtttggattggtttattttagcttatctactcacataagcaattgttagactgtttgagaga 1432228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 3180999 - 3181069
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| | |||||||||  |||||||||||||| ||||||||||| ||| || ||| |||||||||||    
T  3180999 acttatttgaacttatctacagacataagcacttgtgagactatttgaaagagctaatgtaaacaacttat 3181069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 20368142 - 20368180
Alignment:
Q  198 ttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  20368142 ttgtaagactatttgggagaacttatgaaaacaacttat 20368180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 19752725 - 19752802
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 232  Q
    ||||||||||||| |||||   |||||||| | |  ||||||||||| ||||||||||||||| ||||| ||||||||    
T  19752725 tgtttggattaacctatttgctcttatctagttatttaagcacttgtgagactatttgagagagcttataaaaacaac 19752802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 30536884 - 30536953
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 224  Q
    |||||||||| |||||||| || ||||||||| ||||||| |||| | ||||| |||| |||||||||||    
T  30536884 tgtttggattgacttatttgagtttatctacttacataagtacttattagactgtttgtgagaacttatg 30536953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 32171302 - 32171383
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||  ||||||| ||||||  || | |||||||||||||  ||||| ||||||||| |||||||||||| |||||    
T  32171302 tgtttggattgtcttatttcagcttaagtattgacataagcacttgcgagactgtttgagagagcttatgaaaacagcttat 32171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 34404006 - 34403925
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||||||||| |||| ||  |||| ||||| ||||||| ||||| |||  ||||| ||| |||||||||||||    
T  34404006 tgtttggattaacttatttcagctaataaactagcataaacacttgttagactgtttaggagaagttaagaaaacaacttat 34403925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 2455397 - 2455330
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||||||||||| ||||||||   | || | ||||||||||||||||||||||||||||||||    
T  2455397 ttatttgagcttatctacaaacataagtt-tggtgaaactatttgagagaacttatgaaaacaacttat 2455330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 28005475 - 28005559
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||| ||||| || |||| |||||| |||||  ||||||||||||||||||| ||| |||||  ||||| ||||| ||||||||    
T  28005475 tgtttagattagctcatttgagcttacctactggcataagcacttgtaagactgtttaagagagtttatgtaaacagcttataac 28005559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 34544086 - 34544138
Alignment:
Q  178 ttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||||||||| |||||||||| | ||||||||| ||| ||||||||||||    
T  34544086 ttatctactaacacaagcacttgtgaaactatttgaaagatcttatgaaaaca 34544138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 1669751 - 1669798
Alignment:
Q  189 cataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||| ||||||||||||||| ||| |||| ||||||||||||||||||    
T  1669751 catatgcacttgtaagactaattgggagagcttatgaaaacaacttat 1669798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 12111116 - 12111073
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttg 200  Q
    |||||||| |||||||| ||||||||||||| ||||||||||||    
T  12111116 tttggattgacttatttgagcttatctactagcataagcacttg 12111073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 27693392 - 27693439
Alignment:
Q  189 cataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| |||||| |||||||||||||||| ||||| |||||||||||    
T  27693392 cataagtacttgtgagactatttgagagaatttatggaaacaacttat 27693439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 8146991 - 8147069
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    |||| |||||||| || ||| ||| | |||||| ||||||| ||||| ||| | ||| |||||||||||||||||||||    
T  8146991 gattgacttatttaagtttacctattgacataaccacttgttagactgtttcaaagagcttatgaaaacaacttataac 8147069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 10353705 - 10353755
Alignment:
Q  180 atctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||||||||||||||||| ||||| |||| |||| ||| ||||||||    
T  10353705 atctactaacataagcacttgtgagactgtttgggagagcttgtgaaaaca 10353755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 725586 - 725655
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| || ||||| |||||||||| |||| || |||  ||| |||||| ||||||||||||||||||    
T  725586 cttatttgagattatcaactaacataaacactcgtgagaacattcgagagagcttatgaaaacaacttat 725655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 2457092 - 2457035
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    ||||||||||  ||||||| || ||||||||  |||||||||||||||||||| ||||    
T  2457092 tgtttggattggcttatttgagattatctaccgacataagcacttgtaagactgtttg 2457035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 4081055 - 4080986
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| | |||||||||| |||||||  |||||   |||||||||||||  |||||||||||||||||    
T  4081055 cttatttaaacttatctactgacataagtgcttgtggcactatttgagagattttatgaaaacaacttat 4080986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 7945796 - 7945884
Alignment:
Q  147 tatggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||| ||||||| |||| |||||||  |||||||||||| ||||||||||| || | |   |||| ||||| |||||||||||||||||    
T  7945796 tatgggtttgtttagattgacttattg-agcttatctactgacataagcactcgtgacatggtttgggagaaattatgaaaacaacttat 7945884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 8348366 - 8348293
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||||||||||||||||  | |||| || || | | ||| ||||||||| |||| ||||||||||||||||    
T  8348366 acttattttagcttatctaccgatataatcatttttgatactgtttgagagagcttacgaaaacaacttataac 8348293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 236
Target Start/End: Original strand, 9559505 - 9559538
Alignment:
Q  203 agactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||||||||||||||||||    
T  9559505 agactatttgggagaacttatgaaaacaacttat 9559538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 10031860 - 10031803
Alignment:
Q  178 ttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    ||||||||| |||||||||||||| ||||| ||||| ||| | ||||||| |||||||    
T  10031860 ttatctactgacataagcacttgtgagactgtttgaaagagcctatgaaaccaactta 10031803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 22743631 - 22743551
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||||   |||||||| |||||||| ||| |||| | |||||||||||| || |||| || |||||||||||||||    
T  22743631 tgtttggattaggatattttagtttatctacaaac-taagaaattgtaagactatctgtgagagctcatgaaaacaacttat 22743551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 31338123 - 31338046
Alignment:
Q  160 ggattaacttattttagcttatctactaacataagcacttgtaagact-atttgagagaacttatgaaaacaacttat 236  Q
    ||||| |||||||| ||||||||||||| ||||||||| |  || |||  |||| |||| ||||||||||||||||||    
T  31338123 ggattgacttatttgagcttatctactagcataagcacgtacaaaactcttttgtgagagcttatgaaaacaacttat 31338046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 33068521 - 33068590
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 224  Q
    ||||||||||  ||||||| | |||||||||| ||||||||||||| || | | |||| |||||||||||    
T  33068521 tgtttggattggcttatttgaacttatctactgacataagcacttggaaaagtgtttgggagaacttatg 33068590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 33737721 - 33737640
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| | |||||||  || ||||||| | |||||| |||||||   ||| |||||||||||||||||| |||||||||    
T  33737721 tgtttggaatgacttattcgagtttatctattgacataaacacttgtgcaactgtttgagagaacttatgaacacaacttat 33737640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 2458880 - 2458956
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||| |||||| |||| || |||||||||| || ||||||||| | |||| ||| | ||| ||||||||||||    
T  2458880 ttgtttgggttaactaatttgagtttatctactagcaaaagcacttgcacgactgtttaaaagagcttatgaaaaca 2458956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 7901750 - 7901822
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaa 227  Q
    ||||||||||||||||||| || |||| || || ||||||| ||||| ||||| ||||  ||| |||||||||    
T  7901750 tgtttggattaacttatttgagtttatatagtatcataagcccttgtgagactgtttggaagagcttatgaaa 7901822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 10645346 - 10645382
Alignment:
Q  198 ttgtaagactatttgagagaacttatgaaaacaactt 234  Q
    |||||||||| |||| |||||||||||||||||||||    
T  10645346 ttgtaagactgtttgggagaacttatgaaaacaactt 10645382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 24973948 - 24973996
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaaga 205  Q
    ||||||||| ||||||| | ||||||| || ||||||||||||||||||    
T  24973948 tttggattagcttatttgaacttatctgctgacataagcacttgtaaga 24973996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 27857496 - 27857428
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| || ||||||||| |||||  ||||||| | ||| |||| |||| ||||||||||||||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttat 27857428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 31668474 - 31668430
Alignment:
Q  189 cataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    ||||| ||||||| |||||||| |||||| |||||||||||||||    
T  31668474 cataaacacttgtgagactattagagagagcttatgaaaacaact 31668430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 27123271 - 27123352
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||||||||| |||||||  |||| |||||| |||||| ||||| ||||||||| |||||| |||||||||||    
T  27123271 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttat 27123352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 56186816 - 56186894
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 232  Q
    |||||||||||||||||||  || |||||||||||||||| ||||||| |||||||| |||| |||||| | |||||||    
T  56186816 ttgtttggattaacttattcgagtttatctactaacataaacacttgtgagactattcgagaaaacttacggaaacaac 56186894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 18628486 - 18628553
Alignment:
Q  169 tattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||| |||||||||||| |||||| ||||||| ||||| |||| |||| ||||||||||||||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttat 18628553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 17822784 - 17822864
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||||||||| |||||||||||| |||||||  | ||| |||||||||  |||||| |||||||||| |||||    
T  17822784 tgtttggattaacttatttgagcttatctactgacataagttc-tgtgagactatttaggagaacatatgaaaacagcttat 17822864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 231
Target Start/End: Original strand, 33534099 - 33534164
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaa 231  Q
    |||||||| |||||||||| | ||||||| |||||| ||| ||||||||||| |||||||||||||    
T  33534099 acttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatgaaaacaa 33534164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 53315477 - 53315400
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaac 232  Q
    |||||||||| |||||||| |||||||| |||   |||||||| | |||||||||||| |||| ||||||||||||||    
T  53315477 tgtttggattgacttatttgagcttatccactggtataagcacatataagactatttgtgagagcttatgaaaacaac 53315400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 4691986 - 4691918
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||||||||||||  || || ||||||| ||||||||||||| |||||||| |||||||||||    
T  4691986 ttatttgagcttatctactgtcacaatcacttgtgagactatttgagaaaacttatggaaacaacttat 4691918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 28615494 - 28615411
Alignment:
Q  146 atatggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||| | |||||||||| |||||||| || |||||||||| ||||| ||||||| ||| | |||| |||||||||||||||||    
T  28615494 atatgggtctgtttggattgacttatttaagtttatctactagcataaacacttgtgagattgtttg-gagaacttatgaaaaca 28615411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 32421252 - 32421172
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactt 234  Q
    ||||||||||| |||||||| ||| |||  |||| |||||| |||||| |||||| ||||||||| |||||||| ||||||    
T  32421252 ttgtttggattgacttatttgagcatattcactagcataaggacttgtgagactacttgagagaagttatgaaatcaactt 32421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 49940086 - 49940165
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    |||||||||| |||||||| |||||| || ||||||||||   |||| ||||| |||||||||||||||||||||| ||||    
T  49940086 tgtttggattgacttatttgagcttacctgctaacataagtt-ttgtgagactgtttgagagaacttatgaaaacagctta 49940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 2996718 - 2996643
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||| ||||||| | ||||| || | |||||||||||| | ||||| ||||||||| ||||||||||||||||||    
T  2996718 gattagcttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttat 2996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 9720568 - 9720647
Alignment:
Q  150 ggatttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 229  Q
    |||| |||| ||||| |||||||| || ||||||||||||||||||||| |  ||||| ||||||| |||||||| ||||    
T  9720568 ggatctgttgggattgacttatttgagtttatctactaacataagcactagatagactgtttgagaaaacttatggaaac 9720647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 22471401 - 22471350
Alignment:
Q  179 tatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||| |||||||||||||| ||||| |||| |||||||||||||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatgaaaaca 22471350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 14011386 - 14011316
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatg 224  Q
    ||||||||||| |||| ||| | |||||||||| |||||||||| ||||| |||||||| |||| ||||||    
T  14011386 ttgtttggatttacttctttgaacttatctacttacataagcacatgtaaaactatttgggagagcttatg 14011316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 18512434 - 18512492
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttga 213  Q
    ||||| ||||||||||||| |||||||||||| |||||| ||||||| |||||| ||||    
T  18512434 tgtttcgattaacttatttgagcttatctactgacataaacacttgtgagactagttga 18512492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 3549486 - 3549547
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    |||||||||| ||||||| |  ||||||||||| | ||||| ||||||||||||||||||||    
T  3549486 cttattttagtttatctattggcataagcacttatgagactgtttgagagaacttatgaaaa 3549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 21469848 - 21469909
Alignment:
Q  162 attaacttattttagcttatctactaacataagcac-ttgtaagactatttgagagaactta 222  Q
    |||| ||||||| ||||||||||| ||||||| ||| |||||| ||||||||||||||||||    
T  21469848 attagcttatttgagcttatctacaaacataaacactttgtaacactatttgagagaactta 21469909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 37575854 - 37575939
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||||||| |||||||| || |||||| ||| ||||| | || || | | | |||||||||||||||||||| ||||||||||    
T  37575854 ttgtttggattgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataacttataac 37575939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 47399636 - 47399555
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| |||||||||||| | ||||| ||||  |||||  |||||| |||||  |||||||||||| ||||||||||||||    
T  47399636 tgtttgaattaacttatttgaacttatatactggcataaaaacttgtgagactgattgagagaacttgtgaaaacaacttat 47399555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 55870261 - 55870334
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||||||||||||||| || ||||||| | |||||| || |||| ||||| ||||||| | ||||||||||    
T  55870261 tgtttggattaacttatttgagtttatctaatgacataaacatttgtgagactctttgagatagcttatgaaaa 55870334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 4072016 - 4071948
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| || ||| ||| ||| |||||||||||| ||||| ||||||||| |||||||||||| |||||    
T  4072016 ttatttgaggttaactattaatataagcacttgtgagactgtttgagagagcttatgaaaacagcttat 4071948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 22662170 - 22662247
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| || |||||||||||||||||||||  ||| ||    || ||||||||||||||| |||||||    
T  22662170 tgtttggattgacttatttgagtttatctactaacataagcactcataacac----tgggagaacttatgaaaaaaacttat 22662247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 22666649 - 22666726
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| || |||||||||||||||||||||  ||| ||    || ||||||||||||||| |||||||    
T  22666649 tgtttggattgacttatttgagtttatctactaacataagcactcataacac----tgggagaacttatgaaaaaaacttat 22666726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 50298653 - 50298609
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||    
T  50298653 ttattttagcttatctactgacataagcacttgtgagactgtttg 50298609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 50742790 - 50742830
Alignment:
Q  190 ataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  50742790 ataagcacttgttagactgtttgagagaacttatgaaaaca 50742830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 6428171 - 6428088
Alignment:
Q  153 tttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| ||| |||||||| ||||||| || |   |||||||||||| ||||  |||||||||  |||||||||||||||||    
T  6428171 tttgtttgaattgacttatttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttat 6428088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 24091608 - 24091533
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| |||||| || |||||||||||||||| ||||||  | ||| |||  ||||||||||| |||||||||||    
T  24091608 gattaatttatttgagtttatctactaacataaacacttgccaaactgttttggagaacttatggaaacaacttat 24091533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 32831438 - 32831521
Alignment:
Q  156 gtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    |||||||||  || |||| |||||||||||| |||||||||||| | | ||  |||| ||||||  ||||||||||||||||||    
T  32831438 gtttggattggctcatttgagcttatctactgacataagcacttttgataccttttgggagaacagatgaaaacaacttataac 32831521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 39178184 - 39178259
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaac 229  Q
    ||||||||||| || ||||| ||| |||||||| |||||| ||||| | | ||| |||| ||||||||||||||||    
T  39178184 ttgtttggattgacgtatttaagcatatctactgacataaacacttttgacactgtttgggagaacttatgaaaac 39178259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 46860066 - 46859999
Alignment:
Q  158 ttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatga 225  Q
    ||||||| |||||||| | |||||||| | |||||||||||||| | ||| ||||||||| |||||||    
T  46860066 ttggattgacttatttgaacttatctattcacataagcacttgtgaaactgtttgagagagcttatga 46859999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 50746124 - 50746045
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||| ||| |||||||| || |||||||||  ||||||||||||| |||||||||| | ||  |||||||||||| ||||    
T  50746124 tttgtattgacttatttgagtttatctacttgcataagcacttgtgagactatttgtgtgagtttatgaaaacaatttat 50746045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 27725354 - 27725284
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||| |||||||||||| | |||||||| | || |||| ||||||||| |||||| ||| |||||||    
T  27725354 acttatttgagcttatctactgagataagcacatatacgactgtttgagagagcttatggaaataacttat 27725284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 32420979 - 32421029
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagact 207  Q
    |||||||| |||||||| |||||| |||||| ||||||||||||| |||||    
T  32420979 tttggattgacttatttgagcttacctactagcataagcacttgtgagact 32421029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 49003973 - 49004042
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttata 237  Q
    ||||||| ||||||||||||| | ||||   |||| |||||||||||||||||||||||||| || |||||    
T  49003973 cttatttgagcttatctactagcttaagtt-ttgtgagactatttgagagaacttatgaaaataagttata 49004042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 10365923 - 10365842
Alignment:
Q  158 ttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||| |||||||| | |||||||||| |||||| |||| |  ||||||||||||| | |||||  |||||| |||||||    
T  10365923 ttggattgacttatttaatcttatctactgacataaacactggagagactatttgagacagcttatcgaaacaaattataac 10365842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 13126495 - 13126575
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||  |||||||||||||| |||||||||||||   |||| ||||| ||||  ||||||||| |||||| |||||    
T  13126495 tgtttggattggcttattttagcttacctactaacataag-ttttgtgagactgtttggaagaacttataaaaacagcttat 13126575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 17975256 - 17975313
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    |||||||||| |||||||| ||||||||||| |||| || ||||||| | ||||||||    
T  17975256 tgtttggattgacttatttgagcttatctaccaacacaaacacttgtcaaactatttg 17975313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 212
Target Start/End: Complemental strand, 21157907 - 21157862
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttg 212  Q
    ||||||| |||| ||||||| |||||||||||||||||||| ||||    
T  21157907 cttatttgagctcatctactgacataagcacttgtaagactgtttg 21157862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 24087483 - 24087406
Alignment:
Q  159 tggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||| || |||||| || |||||||||||||||| ||||||  | ||| |||  ||||||||||| |||||||||||    
T  24087483 tggatcaatttatttgagtttatctactaacataaacacttgccaaactgttttggagaacttatggaaacaacttat 24087406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 24160450 - 24160523
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||| |||||||| |||||||| ||  | ||||| |||||| ||| |||||| | |||||||||||||||    
T  24160450 tttggatttacttatttgagcttatcaacagatataagtacttgtgagattatttgggtgaacttatgaaaaca 24160523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 37863893 - 37863954
Alignment:
Q  175 agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| ||||  ||| ||||| || || |||||||||||||||||||||||||| |||||    
T  37863893 agcttatgtactggcattagcacatgcaaaactatttgagagaacttatgaaaacagcttat 37863954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 49939882 - 49939942
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||| ||||||||||||| |||||||  |||| ||||||||||  ||||||||||||||    
T  49939882 cttatttaagcttatctactagcataagc-tttgtgagactatttggaagaacttatgaaaa 49939942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 51560228 - 51560289
Alignment:
Q  175 agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||||||||  ||||||||||| | ||||| |||| |||| |||||||||||| |||||    
T  51560228 agcttatctactggcataagcacttatgagactctttgggagaccttatgaaaacaccttat 51560289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 1554940 - 1555000
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    |||||| |||||||||||||   |||| ||||| |||||| |||||||||| |||||||||    
T  1554940 ttatttgagcttatctactacactaagaacttgcaagactgtttgagagaatttatgaaaa 1555000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 25487482 - 25487526
Alignment:
Q  161 gattaacttattttagcttatctactaacataagcacttgtaaga 205  Q
    ||||||||||||| || ||||||| || |||||||||||||||||    
T  25487482 gattaacttatttgagtttatctattagcataagcacttgtaaga 25487526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 27122082 - 27122158
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    |||||||| |||||| |||| || |||||||||| || ||||||||| | |||| ||| | ||| ||||||||||||    
T  27122082 ttgtttgggttaactaatttgagtttatctactagcaaaagcacttgcacgactgtttaaaagagcttatgaaaaca 27122158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 37636107 - 37636167
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagaga 217  Q
    |||||||| | |||||| || |||||||||||||||||||| ||||| ||| |||| ||||    
T  37636107 tttggattgatttatttgagtttatctactaacataagcacctgtaaaactgtttgggaga 37636167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 236
Target Start/End: Complemental strand, 45214473 - 45214441
Alignment:
Q  204 gactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||||||||||||||||| ||||||||    
T  45214473 gactatttgagagaacttatgaaatcaacttat 45214441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 8090082 - 8090006
Alignment:
Q  160 ggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||| |||||||| | |||||||||||||| ||||||| |  ||||||||||||||| ||||||||||||||||||    
T  8090082 ggattgacttatttgaacttatctactaacacaagcactcgcgagactatttgagagagcttatgaaaacaacttat 8090006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 10638454 - 10638521
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaactta 222  Q
    |||||||||| |||||||| || |||||||| |||||||||||||||||||||||||| |||| ||||    
T  10638454 tgtttggattgacttatttaagattatctaccaacataagcacttgtaagactatttgggagagctta 10638521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 32849327 - 32849248
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||| ||| |||||||| ||||||||||||| ||||||||||||| || || |||| ||||||||||||||| |||||||    
T  32849327 tttgaattgacttatttaagcttatctactatcataagcacttgtgaggctgtttgggagaacttatgaaaaaaacttat 32849248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 499650 - 499731
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| |||||||| |||||| ||||| |||||||||| ||| || || |||| ||||||||||||||||| |||||    
T  499650 tgtttggattgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttat 499731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 12459920 - 12460001
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||||||| ||||||||  |||||||| || |||||||||| ||| ||||| |||| |||||| ||||||||||||||||    
T  12459920 tgtttggattgacttatttcggcttatctgctgacataagcacctgtgagactgtttgggagaacctatgaaaacaacttat 12460001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 11105057 - 11104981
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||||||| | |||||| |||||||| || | ||||||||||||| | |||||||| |||||||||||||||||    
T  11105057 ttgtttggattgatttatttgagcttatcaaccagcataagcacttgtgatactatttgggagaacttatgaaaaca 11104981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 5377115 - 5377197
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||| |||||  ||||||| |||||||||| | |||||||||||||||||||| || | || |||||||||||||| |||||    
T  5377115 ttgttcggattggcttatttgagcttatctattgacataagcacttgtaagactgttagcgataacttatgaaaacagcttat 5377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 26004916 - 26004962
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgt 201  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||    
T  26004916 tgtttggattgacttattttagcttatctactagcataagcacttgt 26004962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 42647041 - 42646969
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||||||  ||||||| |||||||||||| |||| |||||||| |||||||||||  ||||||||||||||    
T  42647041 tgtttggattggcttatttgagcttatctactgacattagcacttg-aagactatttggaagaacttatgaaaa 42646969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 11297115 - 11297195
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    |||||| ||| |||||||| |||||||||| |  ||||| ||||||||||||| ||||| ||| |||||| ||||||||||    
T  11297115 tgtttgaattgacttatttaagcttatctagtggcataaacacttgtaagactgtttgaaagagcttatggaaacaactta 11297195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 14599291 - 14599375
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    |||||||||| | |||||| | ||||| ||||| ||||| ||||||||||| | ||||||||| |||||  ||||||||||||||    
T  14599291 tgtttggattcagttatttgaacttatttactagcataaacacttgtaagattgtttgagagagcttatcgaaacaacttataac 14599375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 25705578 - 25705624
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgt 201  Q
    |||||||||||| |||||| | |||||||||||||||||||||||||    
T  25705578 tgtttggattaaattatttgaacttatctactaacataagcacttgt 25705624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 35135571 - 35135649
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    ||||||||||||||||||| ||||| |||||| |||||| ||||||| | |||||| | |||| | |||| ||||||||    
T  35135571 tgtttggattaacttatttcagcttctctactgacataaccacttgtgatactattcgggagagcctatggaaacaact 35135649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 10125649 - 10125718
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    ||||||| |||||||||||| |||| ||||||||| | | | | |||||||||||||| |||||||||||    
T  10125649 cttatttaagcttatctactgacatgagcacttgtgacattgtctgagagaacttatgtaaacaacttat 10125718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 36639673 - 36639600
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||||||  ||||||| | |||| ||| | |||||||||||| ||||||| |||||||||||||| |||||    
T  36639673 tgtttggattgtcttatttgaacttacctatttacataagcacttataagactgtttgagagaacttacgaaaa 36639600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 25720336 - 25720412
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaa 231  Q
    |||||| |||| ||||||| || |||||||||  ||||||||||||| ||||| | ||||||| ||||| |||||||    
T  25720336 tgtttgaattagcttatttgaggttatctactggcataagcacttgtgagactgtctgagagagcttataaaaacaa 25720412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 39257325 - 39257365
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagact 207  Q
    ||||||| ||||||||||||||||||||||||||| |||||    
T  39257325 cttatttaagcttatctactaacataagcacttgtgagact 39257365  T

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Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 17259348 - 17259289
Alignment:
Q  175 agcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactt 234  Q
    ||||||||||||||||||||||||||| |||||  ||||| || ||| || |||||||||    
T  17259348 agcttatctactaacataagcacttgtgagacttgttgagtgagcttttggaaacaactt 17259289  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 228
Target Start/End: Complemental strand, 37969017 - 37968955
Alignment:
Q  166 acttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    |||| ||| |||||||||||| ||||||| |||||| | ||| ||||||||| ||||||||||    
T  37969017 acttgtttgagcttatctactgacataagtacttgtgaaactgtttgagagatcttatgaaaa 37968955  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 15015982 - 15015922
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||| |||||||||||| ||||||||  |||| ||||| |||| |||||||||||||||    
T  15015982 cttatttgagcttatctactgacataagc-tttgtgagactgtttgggagaacttatgaaaa 15015922  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 17258814 - 17258875
Alignment:
Q  167 cttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaa 228  Q
    ||||||| |||||||| |||||||||||||||||| | | | |||| |||||| ||||||||    
T  17258814 cttatttgagcttatcaactaacataagcacttgtgacattctttgggagaacctatgaaaa 17258875  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 35960564 - 35960484
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaactta 235  Q
    |||||||| ||||||||||| |||||||| | |  |||||||| | || ||||||||||||||| |||||| || |||||||    
T  35960564 ttgtttgggttaacttatttgagcttatcaattggcataagcaat-gtcagactatttgagagagcttatggaagcaactta 35960484  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 36796625 - 36796678
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagact 207  Q
    ||||||||||| |||||||| |||||||||| | |||||| ||||||| |||||    
T  36796625 ttgtttggattgacttatttgagcttatctaatgacataaacacttgtgagact 36796678  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 11095427 - 11095495
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| |||||||||||| |||||| ||||||| | | | ||||||||||||| || ||||| |||||    
T  11095427 ttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttat 11095495  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 11615575 - 11615619
Alignment:
Q  157 tttggattaacttattttagcttatctactaacataagcacttgt 201  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||    
T  11615575 tttggattggcttatttgagcttatctactaacataaacacttgt 11615619  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 26796490 - 26796423
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||||||| ||||||||||| ||||| ||| | |||||| ||||||||| | |||||||||||    
T  26796490 ttatttgagcttatgtactaacataaacacttctaacattatttg-gagaacttaaggaaacaacttat 26796423  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 32172791 - 32172723
Alignment:
Q  168 ttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttat 236  Q
    |||||| ||||||| ||||| ||||||||||||| |||   |||| |||| |||||| |||||||||||    
T  32172791 ttatttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttat 32172723  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 239
Target Start/End: Original strand, 35445763 - 35445846
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaacttataac 239  Q
    ||||||||| | ||||||| || ||||||||| |||||||   |||| ||||| ||||| |||| ||||||||||| ||||||||    
T  35445763 tgtttggatcatcttatttgagtttatctactgacataagtt-ttgtgagactctttgacagaatttatgaaaacagcttataac 35445846  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 42034211 - 42034167
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcactt 199  Q
    ||||||||||| ||||||| |||||| ||||| ||||||||||||    
T  42034211 tgtttggattagcttatttgagcttacctactgacataagcactt 42034167  T

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Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 69821 - 69742
Alignment:
Q  154 ttgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaacaact 233  Q
    |||||| ||||||||||||| || ||||| ||  |||||  ||||||  | |||||||||||||||||||||||||||||    
T  69821 ttgtttagattaacttatttaagattatccacggacatagccacttgagaaactatttgagagaacttatgaaaacaact 69742  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 159892 - 159967
Alignment:
Q  155 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactatttgagagaacttatgaaaaca 230  Q
    ||||||||||  ||||||| |||||||||||||| |||| ||||||| | |||||||  ||||||| ||| |||||    
T  159892 tgtttggattggcttatttgagcttatctactaatataaacacttgtgaaactattttggagaactaatggaaaca 159967  T

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