View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20307_high_3 (Length: 350)

Name: NF20307_high_3
Description: NF20307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20307_high_3
NF20307_high_3
[»] chr7 (25 HSPs)
chr7 (1-251)||(18873170-18873420)
chr7 (1-246)||(15167985-15168230)
chr7 (1-242)||(10895795-10896036)
chr7 (8-250)||(14422802-14423043)
chr7 (1-257)||(12709833-12710089)
chr7 (1-257)||(13122904-13123160)
chr7 (8-246)||(16009395-16009631)
chr7 (7-257)||(13743526-13743774)
chr7 (38-257)||(12590633-12590850)
chr7 (38-257)||(13007281-13007497)
chr7 (50-244)||(16677152-16677348)
chr7 (50-244)||(17651388-17651584)
chr7 (191-283)||(21230923-21231015)
chr7 (191-270)||(20311026-20311107)
chr7 (191-246)||(11382871-11382926)
chr7 (191-246)||(11389348-11389403)
chr7 (191-283)||(148619-148711)
chr7 (127-246)||(13679428-13679548)
chr7 (192-247)||(2971254-2971309)
chr7 (192-247)||(20906461-20906516)
chr7 (192-246)||(11311059-11311113)
chr7 (211-252)||(831628-831669)
chr7 (211-252)||(1196808-1196849)
chr7 (211-252)||(34958578-34958619)
chr7 (190-246)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (1-251)||(22750951-22751201)
chr5 (8-283)||(38144500-38144773)
chr5 (8-246)||(28370055-28370291)
chr5 (8-246)||(19512204-19512441)
chr5 (38-251)||(23528479-23528690)
chr5 (191-270)||(22438723-22438803)
chr5 (191-283)||(42961566-42961658)
chr5 (182-246)||(18407944-18408008)
chr5 (182-246)||(23111200-23111264)
chr5 (231-283)||(1856445-1856497)
chr5 (231-283)||(21674415-21674467)
chr5 (192-247)||(19236900-19236955)
chr5 (132-258)||(34830024-34830150)
chr5 (194-247)||(22461158-22461211)
chr5 (194-247)||(22467782-22467835)
[»] chr3 (24 HSPs)
chr3 (1-246)||(14762758-14763003)
chr3 (1-244)||(38310802-38311045)
chr3 (14-244)||(20247791-20248021)
chr3 (7-244)||(24192771-24193009)
chr3 (8-246)||(9534146-9534382)
chr3 (8-247)||(23370505-23370743)
chr3 (78-270)||(16801444-16801635)
chr3 (56-247)||(24933828-24934016)
chr3 (11-244)||(55499104-55499337)
chr3 (38-257)||(41455087-41455304)
chr3 (185-246)||(18929239-18929300)
chr3 (182-246)||(17240513-17240577)
chr3 (231-283)||(24122221-24122273)
chr3 (231-283)||(13967762-13967814)
chr3 (231-283)||(13973237-13973289)
chr3 (192-247)||(13302240-13302295)
chr3 (192-247)||(13323787-13323842)
chr3 (133-247)||(10389443-10389557)
chr3 (133-247)||(10414532-10414646)
chr3 (133-247)||(10421202-10421316)
chr3 (192-247)||(12033444-12033499)
chr3 (192-247)||(13312896-13312951)
chr3 (192-247)||(17131732-17131787)
chr3 (192-247)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-263)||(11834-12096)
scaffold0026 (8-247)||(111504-111741)
[»] chr6 (24 HSPs)
chr6 (13-246)||(23057760-23057993)
chr6 (1-257)||(29614136-29614392)
chr6 (8-246)||(23839016-23839253)
chr6 (8-283)||(18800255-18800529)
chr6 (8-257)||(10986170-10986418)
chr6 (11-246)||(4477678-4477912)
chr6 (112-257)||(930085-930229)
chr6 (8-244)||(21565214-21565449)
chr6 (38-257)||(12168212-12168428)
chr6 (38-257)||(19287121-19287337)
chr6 (38-257)||(19785859-19786075)
chr6 (38-257)||(19878305-19878521)
chr6 (38-257)||(19884081-19884297)
chr6 (58-247)||(34639986-34640173)
chr6 (58-247)||(34646660-34646847)
chr6 (191-283)||(24512807-24512899)
chr6 (133-247)||(25469704-25469816)
chr6 (50-246)||(9187352-9187550)
chr6 (190-246)||(25397172-25397228)
chr6 (190-246)||(19471335-19471391)
chr6 (190-246)||(25348486-25348542)
chr6 (163-247)||(31252394-31252478)
chr6 (190-244)||(25598643-25598697)
chr6 (232-283)||(933615-933666)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-254)||(989-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-254)||(49990-50241)
[»] chr4 (13 HSPs)
chr4 (1-257)||(8045822-8046077)
chr4 (1-257)||(11847917-11848179)
chr4 (58-247)||(53483573-53483760)
chr4 (191-283)||(15408139-15408231)
chr4 (57-247)||(27906130-27906321)
chr4 (190-246)||(8834895-8834951)
chr4 (190-246)||(13888641-13888697)
chr4 (163-244)||(14486632-14486713)
chr4 (190-246)||(15245215-15245271)
chr4 (190-241)||(22724691-22724742)
chr4 (232-283)||(43284008-43284059)
chr4 (211-252)||(15747551-15747592)
chr4 (190-246)||(15308120-15308176)
[»] scaffold0029 (1 HSPs)
scaffold0029 (38-257)||(111728-111948)
[»] chr2 (19 HSPs)
chr2 (8-246)||(19661454-19661690)
chr2 (8-246)||(6483536-6483772)
chr2 (8-246)||(6487003-6487239)
chr2 (50-257)||(26583687-26583892)
chr2 (8-244)||(23089057-23089292)
chr2 (8-244)||(23878826-23879060)
chr2 (8-246)||(23101463-23101700)
chr2 (133-247)||(5706023-5706137)
chr2 (232-283)||(6260135-6260186)
chr2 (182-246)||(23265133-23265197)
chr2 (182-246)||(23280201-23280265)
chr2 (185-246)||(21908353-21908414)
chr2 (239-283)||(19665037-19665081)
chr2 (190-246)||(24661576-24661632)
chr2 (192-247)||(10577-10632)
chr2 (66-257)||(23168288-23168483)
chr2 (66-257)||(23579545-23579740)
chr2 (192-247)||(25180929-25180984)
chr2 (175-256)||(26885166-26885246)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-257)||(740-996)
[»] scaffold0025 (1 HSPs)
scaffold0025 (7-244)||(14398-14635)
[»] scaffold0247 (1 HSPs)
scaffold0247 (8-283)||(11159-11433)
[»] chr8 (17 HSPs)
chr8 (1-244)||(8727735-8727978)
chr8 (8-247)||(44477441-44477678)
chr8 (8-247)||(44492599-44492836)
chr8 (1-257)||(23866424-23866680)
chr8 (8-283)||(27940815-27941091)
chr8 (38-257)||(17054440-17054656)
chr8 (137-246)||(18614217-18614327)
chr8 (191-283)||(14056527-14056619)
chr8 (182-246)||(23482053-23482117)
chr8 (191-279)||(25111976-25112064)
chr8 (231-283)||(30765873-30765925)
chr8 (190-246)||(39364919-39364975)
chr8 (192-246)||(29643386-29643440)
chr8 (192-247)||(24320670-24320725)
chr8 (222-282)||(21325730-21325791)
chr8 (223-282)||(21321132-21321192)
chr8 (190-246)||(21931696-21931752)
[»] chr1 (12 HSPs)
chr1 (8-246)||(20437024-20437261)
chr1 (38-257)||(41111884-41112100)
chr1 (182-246)||(32651563-32651627)
chr1 (191-246)||(19663517-19663572)
chr1 (182-246)||(18712790-18712854)
chr1 (190-246)||(20805320-20805376)
chr1 (191-246)||(11158093-11158148)
chr1 (190-244)||(10811785-10811839)
chr1 (192-247)||(20851132-20851187)
chr1 (192-247)||(20857759-20857814)
chr1 (192-247)||(21706276-21706331)
chr1 (192-247)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (8-247)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (8-247)||(1525-1763)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-257)||(1887-2142)
scaffold0117 (1-257)||(8564-8819)
[»] scaffold0090 (1 HSPs)
scaffold0090 (7-283)||(17985-18261)
[»] scaffold0058 (1 HSPs)
scaffold0058 (7-257)||(109-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (50-283)||(30715-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (8-244)||(3295-3531)
[»] scaffold0077 (1 HSPs)
scaffold0077 (8-244)||(3624-3859)
[»] scaffold0796 (2 HSPs)
scaffold0796 (56-252)||(1727-1920)
scaffold0796 (56-252)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (164-251)||(904-991)
scaffold0456 (164-251)||(8049-8136)
scaffold0456 (7-103)||(806-901)
scaffold0456 (7-103)||(7951-8046)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-87)||(3472-3558)
[»] scaffold0107 (1 HSPs)
scaffold0107 (191-283)||(40495-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (135-253)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (191-280)||(135473-135562)
[»] scaffold0235 (1 HSPs)
scaffold0235 (193-283)||(22556-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (191-270)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (182-246)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (182-246)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (191-246)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (182-246)||(8-72)
[»] scaffold0249 (1 HSPs)
scaffold0249 (239-283)||(2212-2256)
[»] scaffold0146 (1 HSPs)
scaffold0146 (182-246)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (182-246)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (195-257)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (57-257)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (158-257)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (163-247)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (127-246)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (190-246)||(12296-12352)
[»] scaffold0139 (1 HSPs)
scaffold0139 (191-246)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (225-258)||(5487-5520)
[»] scaffold0001 (1 HSPs)
scaffold0001 (175-256)||(493019-493099)
[»] scaffold0348 (2 HSPs)
scaffold0348 (232-280)||(14620-14668)
scaffold0348 (192-247)||(9336-9391)
[»] scaffold0096 (1 HSPs)
scaffold0096 (190-250)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (57-244)||(73149-73337)
[»] scaffold0127 (1 HSPs)
scaffold0127 (192-247)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (192-247)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (192-246)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (163-247)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (190-246)||(2628-2684)


Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 18873170 - 18873420
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  18873170 acacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattaca 18873269  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 200  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873270 agagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 18873369  T
Q  201 aaattatagattatgattatcgagagatagtctcacccttaccttagtttt 251  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18873370 aaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 15167985 - 15168230
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  15167985 acacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattaca 15168084  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 200  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168085 agagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 15168184  T
Q  201 aaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15168185 aaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 10896036 - 10895795
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  10896036 acacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattaca 10895937  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttca 199  Q
    | |||||||||||||| | |||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  10895936 agagaattaacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttca 10895838  T
Q  200 gaaattatagattatgattatcgagagatagtctcacccttac 242  Q
     |||||||||||||||||||| |||||||||||||||||||||    
T  10895837 aaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 14422802 - 14423043
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  14422802 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 14422900  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14422901 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 14422999  T
Q  207 tagattatgattatcgagagatagtctcacccttaccttagttt 250  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  14423000 tagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 12710089 - 12709833
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 99  Q
    |||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| |||||||||||  |||||||||||||||||||    
T  12710089 acacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatattac 12709991  T
Q  100 aac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 198  Q
    ||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  12709990 aaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttc 12709892  T
Q  199 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12709891 aggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 12709833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 13123160 - 13122904
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 99  Q
    |||||||||||||||||||||||||| ||||||| |||  ||||| |||| |||||||||||||||| |||||||||||  |||||||||||||||||||    
T  13123160 acacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaaca-agattaagtttatattctgaacattatattac 13123062  T
Q  100 aac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 198  Q
    ||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  13123061 aaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttc 13122963  T
Q  199 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13122962 aggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13122904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 16009395 - 16009631
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| ||||||| |||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  16009395 ttcatcaattcatccaatcaatcataatt-tcaatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 16009493  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| |||| |||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  16009494 taacatgatcaatacccattcccct-cagaatcatcatcaaaccttaacccacaatttatcttccaaaaccatgcaattaggtcaattttcagaaattat 16009592  T
Q  208 agattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  16009593 agattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 7 - 257
Target Start/End: Original strand, 13743526 - 13743774
Alignment:
Q  7 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 106  Q
    ||||||||||| |||||| |   ||||||| |||| ||||||||||||||||||| |||||||||||||| |||| ||||||||  ||| ||||| | ||    
T  13743526 attcatcaatttatccaaccaagcataatt-tcaaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  107 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 206  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcaggaatta 13743723  T
Q  207 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13743724 taaattatgattattgagagatagtctcacccttaccttagttttgcagaa 13743774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 257
Target Start/End: Complemental strand, 12590850 - 12590633
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| ||||||||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12590850 tcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcatt--ccatcag 12590753  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12590752 aatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12590654  T
Q  237 ccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||    
T  12590653 ccttaccttagttttgcagaa 12590633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 13007281 - 13007497
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  13007281 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 13007377  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13007378 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 13007476  T
Q  237 ccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||    
T  13007477 ccttaccttagttttgcagaa 13007497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 50 - 244
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  50 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 149  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  150 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 244  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  16677252 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 50 - 244
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  50 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 149  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||| |  | | | ||| |||||||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  150 ccctaaccctcaattt-atcttccaaaa-ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 244  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  17651488 ccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 21231015 - 21230923
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 21230923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 20311107 - 20311026
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag--ttttgcagaatgattacacagca 270  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||  |||||||||| |||| |||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaagattgcacagca 20311026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 148619 - 148711
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||  ||| ||||| || || ||  | ||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  148619 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacaacacaatcagttccta 148711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 13679428 - 13679548
Alignment:
Q  127 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 225  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  13679428 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 13679527  T
Q  226 gatagtctcacccttacctta 246  Q
    |||||||||||||||||||||    
T  13679528 gatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 11311059 - 11311113
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||| ||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  11311059 aatttttagaaattctacactattattattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  211 ttatgattatcgagagatagtctcacccttaccttagttttg 252  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  211 ttatgattatcgagagatagtctcacccttaccttagttttg 252  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  211 ttatgattatcgagagatagtctcacccttaccttagttttg 252  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||| ||||||||| ||||| || || ||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 22750951 - 22751201
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  22750951 acacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattaca 22751050  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 200  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751051 agagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 22751150  T
Q  201 aaattatagattatgattatcgagagatagtctcacccttaccttagtttt 251  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22751151 aaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 283
Target Start/End: Complemental strand, 38144773 - 38144500
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| ||||||| |||||    
T  38144773 ttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaat 38144675  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  38144674 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaattatgcaattaggtcaattttcagaaattat 38144576  T
Q  208 agattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144575 agattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 38144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 28370291 - 28370055
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  28370291 ttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 28370193  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28370192 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 28370094  T
Q  208 agattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  28370093 agattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 19512204 - 19512441
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  |||||| |||||    
T  19512204 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaat 19512302  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| | |||||||| |||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19512303 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 19512401  T
Q  207 tagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  19512402 tagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 38 - 251
Target Start/End: Original strand, 23528479 - 23528690
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  23528479 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcatt--ccatcag 23528576  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  23528577 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 23528675  T
Q  237 ccttaccttagtttt 251  Q
    |||||||||||||||    
T  23528676 ccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 22438803 - 22438723
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 270  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 22438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 42961566 - 42961658
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||| ||| ||||| || || ||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 42961658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 18408008 - 18407944
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  18408008 caattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 23111264 - 23111200
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23111264 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 1856497 - 1856445
Alignment:
Q  231 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  1856497 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 1856445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 21674467 - 21674415
Alignment:
Q  231 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  21674467 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 21674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 34830024 - 34830150
Alignment:
Q  132 ttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatag 230  Q
    |||| ||||| ||||| |||||||  |||||||| |||||| | |||||| | ||||| |  |||||||||||||||| ||||  ||||| || |||||     
T  34830024 ttcaaaatcagcatcataccctaattctcaattttatcttcaagaactattctattagattgattttcagaaattatacatta-aattattgaaagataa 34830122  T
Q  231 tctcacccttaccttagttttgcagaat 258  Q
    || ||||||||||||||  |||||||||    
T  34830123 tcccacccttaccttagaattgcagaat 34830150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  194 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  194 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 14763003 - 14762758
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  14763003 acacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattaca 14762904  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 200  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762903 agagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 14762804  T
Q  201 aaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14762803 aaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 38311045 - 38310802
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  38311045 acacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattaca 38310946  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 200  Q
    | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38310945 agagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatattcag 38310846  T
Q  201 aaattatagattatgattatcgagagatagtctcacccttacct 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38310845 aaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 20248021 - 20247791
Alignment:
Q  14 aattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacat 113  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||||    
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  114 gattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 213  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatta 20247822  T
Q  214 tgattatcgagagatagtctcacccttacct 244  Q
    ||||||| |||||||||||||||||||||||    
T  20247821 tgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 7 - 244
Target Start/End: Original strand, 24192771 - 24193009
Alignment:
Q  7 attcatcaattcatccaatcgctcataattctcaatcaatttatgat-cacagcaacaacatagattaagttttcattctgaacattatattacaacaga 105  Q
    ||||||||||| ||||||||  ||||| || ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  24192771 attcatcaatttatccaatcaatcatattt-tcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  106 attaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaat 204  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaat 24192969  T
Q  205 tatagattatgattatcgagagatagtctcacccttacct 244  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  24192970 tatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 9534146 - 9534382
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||  |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  9534146 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaat 9534244  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| | || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9534245 taacatgatcaatacccattccact-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 9534343  T
Q  208 agattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  9534344 agattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 23370743 - 23370505
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  23370743 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 23370645  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23370644 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 23370546  T
Q  207 tagattatgattatcgagagatagtctcacccttaccttag 247  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  23370545 tagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 78 - 270
Target Start/End: Complemental strand, 16801635 - 16801444
Alignment:
Q  78 ttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaa 176  Q
    |||||||| ||||| | |||||| || | |||||||||| ||||| |  ||| | ||| |||||||||||| |||||||| ||||||| |||||| |||     
T  16801635 ttcattctaaacatcacattacagcatatttaacatgatcattacaccattctcctcaaaatcatcatcaa-ccctaaccttcaattttatcttcaaaag 16801537  T
Q  177 ctatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagca 270  Q
    ||| ||||| |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16801536 ctaagcaatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagca 16801444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 247
Target Start/End: Complemental strand, 24934016 - 24933828
Alignment:
Q  56 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 155  Q
    |||||||||||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  24934016 cagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaa 24933919  T
Q  156 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
       |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24933918 ttttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 55499337 - 55499104
Alignment:
Q  11 atcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaa 110  Q
    ||||||||||||||||  | ||| || |||||||||||||||||||||||||   |||||||||| |||||||| |||||| | ||||||||| ||||||    
T  55499337 atcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaa 55499239  T
Q  111 catgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaatttt-cagaaattata 208  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   || ||| ||||||||||||| | ||||||| |    
T  55499238 catgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcagttaggtcaattttcccgaaattaca 55499141  T
Q  209 gattat-gattatcgagagatagtctcacccttacct 244  Q
     |||||  ||||  |||||||||||||||||||||||    
T  55499140 tattatctattaatgagagatagtctcacccttacct 55499104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 38 - 257
Target Start/End: Complemental strand, 41455304 - 41455087
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || |||||||| | || ||||||| |||||||||  |||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  41455304 tcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaactaacatcatctttactcatt--ccatcag 41455207  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    |||||||||||| ||||||   |||   ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41455206 aatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41455108  T
Q  237 ccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||    
T  41455107 ccttaccttagttttgcagaa 41455087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 18929239 - 18929300
Alignment:
Q  185 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  18929239 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 17240577 - 17240513
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  17240577 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 24122273 - 24122221
Alignment:
Q  231 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  24122273 tctcacccttaccttagttttgcagaaagattaaacagcacaatcggttccta 24122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 13967814 - 13967762
Alignment:
Q  231 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13967814 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13967762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 13973289 - 13973237
Alignment:
Q  231 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  13973289 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 13973237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 10389557 - 10389443
Alignment:
Q  133 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 232  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10389557 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10389458  T
Q  233 tcacccttaccttag 247  Q
     ||||||||||||||    
T  10389457 ccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 10414646 - 10414532
Alignment:
Q  133 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 232  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10414646 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10414547  T
Q  233 tcacccttaccttag 247  Q
     ||||||||||||||    
T  10414546 ccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 10421316 - 10421202
Alignment:
Q  133 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 232  Q
    |||||||||||||||||||||||   |||  ||||  |  |||||||| ||||||| | | ||||||||||||||| ||||| || || || ||||| ||    
T  10421316 tcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaaattatacattataatcattgaaagataatc 10421217  T
Q  233 tcacccttaccttag 247  Q
     ||||||||||||||    
T  10421216 ccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    |||||||| |||||| | ||||||||||| || ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 215; Significance: 1e-118; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 12096 - 11834
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||| | |||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  12096 acacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattaca 11997  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 200  Q
    | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  11996 agagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaatttattttccaaaactatgcaattaggtcaattttcag 11897  T
Q  201 aaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgatta 263  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  11896 aaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagatta 11834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 111504 - 111741
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  111504 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 111602  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  111603 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 111701  T
Q  208 agattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  111702 agattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 13 - 246
Target Start/End: Original strand, 23057760 - 23057993
Alignment:
Q  13 caattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaaca 112  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  113 tgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagatt 212  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcaggaattatagatt 23057959  T
Q  213 atgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||||||||||||||||||    
T  23057960 atgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 29614392 - 29614136
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    ||||||||||||||||||||||||||  |||||| | |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||  || |||    
T  29614392 acacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacattcaat-aca 29614294  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatctt-ccaaaactatgcaattaggtcaattttca 199  Q
    | |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||||| ||||||||||||||    
T  29614293 agagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttttccaaaattatgcaactaggtcaattttca 29614194  T
Q  200 gaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29614193 gaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 29614136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 23839016 - 23839253
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  23839016 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 23839114  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaa-actatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23839115 taacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaatttatcttccaaacactatgcaattaggtcaattttcagaaatta 23839213  T
Q  207 tagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  23839214 tagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 8 - 283
Target Start/End: Original strand, 18800255 - 18800529
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  | ||| || ||||||||||| |||||||| |||||| |||||||||| ||||||| ||||||| | |||||||||||||    
T  18800255 ttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaat 18800353  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  18800354 taacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 18800452  T
Q  207 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  18800453 tagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaaaatcggttccta 18800529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 8 - 257
Target Start/End: Complemental strand, 10986418 - 10986170
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  || ||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  10986418 ttcatcaattcatccaatcaatcgtaatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 10986320  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  10986319 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaatttttagaaatta 10986221  T
Q  207 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    |||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  10986220 tagattatgattattgaaagatagtctcacccttaccttagaattgcagaa 10986170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 4477678 - 4477912
Alignment:
Q  11 atcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaa 110  Q
    ||||| ||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||     
T  4477678 atcaaatcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  111 catgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaattatag 209  Q
    |||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4477777 catgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatag 4477875  T
Q  210 attatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4477876 attatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 112 - 257
Target Start/End: Complemental strand, 930229 - 930085
Alignment:
Q  112 atgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagat 211  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||    
T  930229 atgatcattacccatt-cccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagat 930131  T
Q  212 tatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  930130 tatgattattgagagatagtctcacccttaccttagttttgcagaa 930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 21565449 - 21565214
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||||||| |||| | | ||||||||| |||    
T  21565449 ttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 21565351  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||| |||||||    
T  21565350 taacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaatta 21565253  T
Q  207 tagattat-gattatcgagagatagtctcacccttacct 244  Q
     | |||||  ||||  |||||||||||||||||||||||    
T  21565252 aatattatctattaatgagagatagtctcacccttacct 21565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 12168212 - 12168428
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  12168212 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 12168308  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12168309 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 12168407  T
Q  237 ccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||    
T  12168408 ccttaccttagttttgcagaa 12168428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 19287121 - 19287337
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19287121 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19287217  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19287218 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19287316  T
Q  237 ccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||    
T  19287317 ccttaccttagttttgcagaa 19287337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 257
Target Start/End: Complemental strand, 19786075 - 19785859
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19786075 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19785979  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  ||| ||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19785978 aatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19785880  T
Q  237 ccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||    
T  19785879 ccttaccttagttttgcagaa 19785859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 19878305 - 19878521
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19878305 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19878401  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19878402 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19878500  T
Q  237 ccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||    
T  19878501 ccttaccttagttttgcagaa 19878521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 19884081 - 19884297
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  19884081 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 19884177  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  19884178 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 19884276  T
Q  237 ccttaccttagttttgcagaa 257  Q
    ||| |||||||||||||||||    
T  19884277 cctaaccttagttttgcagaa 19884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 247
Target Start/End: Complemental strand, 34640173 - 34639986
Alignment:
Q  58 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 157  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34640173 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34640076  T
Q  158 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
     ||   |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34640075 ttcttattattttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 58 - 247
Target Start/End: Complemental strand, 34646847 - 34646660
Alignment:
Q  58 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 157  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||| ||||||||||||||||      
T  34646847 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaaccatcatcaaaccctaatt 34646750  T
Q  158 ctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
     ||   |||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  34646749 ttcttattattttccaaaattattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 24512899 - 24512807
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| ||||||| ||||||||| |||| ||||||| ||||||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaaaatcggttccta 24512807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 25469816 - 25469704
Alignment:
Q  133 tcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtc 232  Q
    ||||||| |||||||||||||||   |||  |||| ||||||||| || ||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  25469816 tcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaattt-cagaa-ttatagattatgattattgagagatagtc 25469719  T
Q  233 tcacccttaccttag 247  Q
    |||||||||||||||    
T  25469718 tcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 246
Target Start/End: Original strand, 9187352 - 9187550
Alignment:
Q  50 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 149  Q
    |||||||| |||||  ||||||||||   |||||||||||| || ||||||||| | | ||||||||| ||||    |||| |||| ||||| ||||||     
T  9187352 tgatcacaacaacattatagattaagaaatcattctgaacactaaattacaacacattaaacatgattcttacatcattcctttcaaaatcagcatcaa- 9187450  T
Q  150 ccctaaccctcaattt--atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||  | ||||||  || ||| | ||| || ||||||| || ||||| ||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  9187451 ccctaattcccaatttttatattcaagaacaattcaattagatctatttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 31252394 - 31252478
Alignment:
Q  163 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || ||  | ||||| |||||||||||||||||    
T  31252394 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 244  Q
    |||||||||||||| |||| |||||||| || ||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 933666 - 933615
Alignment:
Q  232 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||| ||||||||| |||| || |||| ||||||||||||    
T  933666 ctcacccttaccttagatttgcagaaagattgcatagcaaaatcggttccta 933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 989 - 1240
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  989 acacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattaca 1087  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 200  Q
    | |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  1088 agagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcag 1186  T
Q  201 aaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 254  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1187 gaattatagattatgattattgagagatagtctcacccttaccttagttttgca 1240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 49990 - 50241
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  49990 acacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaaca-agattaagttttcattctgaacattatattaca 50088  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 200  Q
    | |||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  50089 agagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcag 50187  T
Q  201 aaattatagattatgattatcgagagatagtctcacccttaccttagttttgca 254  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50188 gaattatagattatgattattgagagatagtctcacccttaccttagttttgca 50241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 8046077 - 8045822
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  8046077 acacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattaca 8045978  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcag 200  Q
    | ||||||||||| ||  |||||||||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  8045977 agagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcag 8045879  T
Q  201 aaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8045878 aaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 8045822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 11847917 - 11848179
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  11847917 acacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattata 11848016  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa------tttatcttccaaaactatgcaattaggtcaat 194  Q
    | || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||||||      || || || ||||||||||| | |||||||||    
T  11848017 aaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaat 11848116  T
Q  195 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11848117 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 11848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 53483573 - 53483760
Alignment:
Q  58 gcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaacc 157  Q
    |||||||||| ||||||||||||||||| ||| ||| |||   | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||      
T  53483573 gcaacaacatggattaagttttcattcttaacgttaaattcagagaaaactaacatcatctttactcatt--ccatcagaatcatcatcaaaccctaatt 53483670  T
Q  158 ctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
     ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  53483671 ttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 15408139 - 15408231
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| |||| ||||| | ||||||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaagattgcacagaaaaatcggttccta 15408231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 247
Target Start/End: Original strand, 27906130 - 27906321
Alignment:
Q  57 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 156  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| | ||| | |||| ||||| ||||| |||||||     
T  27906130 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccttttctttcaaaatcaacatcacaccctaat 27906229  T
Q  157 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
     |||||||| |||||| | |||||| | ||||  | ||||||||||||||||| |||||||| || || ||||| || |||||||| |||||    
T  27906230 tctcaattttatcttcaagaactattctattatattaattttcagaaattatacattatgatcattgaaagataatcccacccttatcttag 27906321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 14486632 - 14486713
Alignment:
Q  163 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 244  Q
    ||||||||| | ||| || ||||| | | ||||||||||||||||| |||||||| || ||  |||||||||||||||||||    
T  14486632 tttatcttcaagaacaattcaattcgattaattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 241
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcaccctta 241  Q
    |||||||||||||||| || | ||| ||||| ||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 43284059 - 43284008
Alignment:
Q  232 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||| ||||||||| |||| ||||||  ||||||||||||    
T  43284059 ctcacccttaccttagatttgcagaaagattgcacagcgaaatcggttccta 43284008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  211 ttatgattatcgagagatagtctcacccttaccttagttttg 252  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||| |||| ||| || ||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 111728 - 111948
Alignment:
Q  38 tcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcaga 137  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  111728 tcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcaga 111827  T
Q  138 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  111828 atcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcac 111927  T
Q  237 ccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||    
T  111928 ccttaccttagttttgcagaa 111948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 6e-99; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 19661690 - 19661454
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  19661690 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 19661592  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661591 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 19661493  T
Q  208 agattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  19661492 agattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 6483536 - 6483772
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  6483536 ttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6483634  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6483635 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6483733  T
Q  208 agattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  6483734 agattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 6487003 - 6487239
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    ||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  6487003 ttcatcaattcatcccatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6487101  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6487102 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 6487200  T
Q  208 agattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  6487201 agattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 50 - 257
Target Start/End: Original strand, 26583687 - 26583892
Alignment:
Q  50 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 149  Q
    ||||||||||||||  |||||||| |  |||||||||||||| |  |||||||| | |||||||||| ||||||| |||||| ||||||||||||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccc-tttcccctcagaatcatcatcaag 26583785  T
Q  150 ccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtt 249  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaattatagattatgattattgagagatagtctcacccttaccttagtt 26583884  T
Q  250 ttgcagaa 257  Q
    ||||||||    
T  26583885 ttgcagaa 26583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 23089292 - 23089057
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  | ||| || ||||||||||||||||||||||||||  |||||||||| |||||||| |||| | | ||||||||| |||    
T  23089292 ttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 23089194  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||| |||||||    
T  23089193 taacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaatta 23089096  T
Q  207 tagattat-gattatcgagagatagtctcacccttacct 244  Q
     | |||||  ||||  |||||||||||||||||||||||    
T  23089095 aatattatctattaatgagagatagtctcacccttacct 23089057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 23878826 - 23879060
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |  || || |||||||||||||||||||| |||||  |||||||||| ||||||||||||||| | ||||||||| |||    
T  23878826 ttcatcaattcatccaatcaattctattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacattacaacataat 23878924  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| |||||||  ||||| |||||||||||| | |||||||||||||||||| ||| | |||   || |||||||||||||||||  |||||||    
T  23878925 taacatgatcattaccccattcccctcagaatcatcaac-aaccctaaccctcaatttaatcct-caaggttaagcaattaggtcaatttttcgaaatta 23879022  T
Q  207 tagattatgattatcgagagatagtctcacccttacct 244  Q
    || || || ||||  |||||||||||||||||||||||    
T  23879023 tatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 23101700 - 23101463
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    ||||| |||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| |||||||| |||| | | ||||||||| |||    
T  23101700 ttcatgaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattacaacataat 23101602  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |||   ||  ||||||||||||||||| |||||||    
T  23101601 taacatgatcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaaacaattaggtcaattttccgaaatta 23101504  T
Q  207 tagattat-gattatcgagagatagtctcacccttacctta 246  Q
     | |||||  ||||  |||||||||||||||||||||||||    
T  23101503 catattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 5706137 - 5706023
Alignment:
Q  133 tcagaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagt 231  Q
    |||||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||  ||||||||||    
T  5706137 tcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattaatgagagatagt 5706039  T
Q  232 ctcacccttaccttag 247  Q
    ||||||||||||||||    
T  5706038 ctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 6260186 - 6260135
Alignment:
Q  232 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260186 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 6260135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 23265133 - 23265197
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23265133 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 23280201 - 23280265
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23280201 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 21908353 - 21908414
Alignment:
Q  185 ttaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||| ||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  21908353 ttagatcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 19665081 - 19665037
Alignment:
Q  239 ttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19665081 ttaccttagttttgcagaatgattacacagcacaatcggttccta 19665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 23168483 - 23168288
Alignment:
Q  66 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 165  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23168483 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23168384  T
Q  166 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23168383 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23168288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 23579740 - 23579545
Alignment:
Q  66 atagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt 165  Q
    ||||||||||   |||| |||||||| | ||||||||| | | ||||||| | |||| | ||| | |||| ||||| ||||| |||||||  ||||||||    
T  23579740 atagattaagaaatcatactgaacatcaaattacaacacattaaacatgactcttacaccttttctttcaaaatcagcatcataccctaattctcaattt 23579641  T
Q  166 ----atcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
        |||||| |||||||| | ||||| | |||||| ||||||||||| |||||||| |  || ||||| || ||||||||||||||  ||||||||    
T  23579640 ttttatcttc-aaaactattctattagattaatttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaa 23579545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  175 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 256  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 996 - 740
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||| |||||||| |||||||||||| || |||||||||||||||||    
T  996 acacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaaca-agattaagtttttatcctgaacattatattaca 898  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttca 199  Q
    | || |||| |||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  897 agagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttca 798  T
Q  200 gaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  797 gaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 244
Target Start/End: Complemental strand, 14635 - 14398
Alignment:
Q  7 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 106  Q
    ||||||||||| ||||||||  ||||| || ||||||| |||||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||||    
T  14635 attcatcaatttatccaatcaatcatattt-tcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  107 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttcagaaatt 205  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatt 14437  T
Q  206 atagattatgattatcgagagatagtctcacccttacct 244  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  14436 atagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 8 - 283
Target Start/End: Original strand, 11159 - 11433
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  || ||||||| ||||||| ||||||| | |||||||||||||    
T  11159 ttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacattacaacagaat 11257  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatt-tatcttccaaaactatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  11258 taacatgatcattactcatt-ccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaatta 11356  T
Q  207 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  11357 tagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaaaatcggttccta 11433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 6e-93; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 8727978 - 8727735
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||    
T  8727978 acacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattaca 8727879  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttcc-aaaactatgcaattaggtcaattttca 199  Q
    |||||||||||||||| | |||||| | ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727878 acagaattaacatgatcaataccca-tacccctcagaatcatcgtcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttca 8727780  T
Q  200 gaaattatagattatgattatcgagagatagtctcacccttacct 244  Q
    ||||||||||||||||||||| ||| |||| ||||||||||||||    
T  8727779 gaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 44477441 - 44477678
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  44477441 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44477539  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44477540 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44477638  T
Q  208 agattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  44477639 agattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 44492599 - 44492836
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| |||||||  ||||||||||||    
T  44492599 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44492697  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattat 207  Q
    ||||||||| | |||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44492698 taacatgatcaatacccattcccct-caaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattat 44492796  T
Q  208 agattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  44492797 agattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 23866424 - 23866680
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataa-ttctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattac 99  Q
    |||||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||| |||||||||| |||||||||||  |||||||||||||||||||    
T  23866424 acacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaaca-agattaagtttatattctgaacattatattac 23866522  T
Q  100 aac-agaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttc 198  Q
    ||  |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  23866523 aaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttc 23866621  T
Q  199 agaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23866622 aggaattataaattatgattattgagagatagtctcacccttaccttagttttgcagaa 23866680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 8 - 283
Target Start/End: Complemental strand, 27941091 - 27940815
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| | |||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  27941091 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaat 27940993  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaat--ttatcttccaa-aactatgcaattaggtcaattttcagaaat 204  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||  | ||||  |||| || ||| ||| || | | |    ||||||||||||||    
T  27940992 taacatgatcaataccca-ttcccctcagaatcatcatcaaaccctaattcccaattcttatttttcaagaacaattctaatcaaacaattttcagaaat 27940894  T
Q  205 tatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
     ||| ||||| || || ||  | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27940893 catatattataatcattgaaggttagcctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 27940815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 17054440 - 17054656
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||| ||  |||| ||||  || ||||    
T  17054440 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacatcatctttactcatt--ccatcag 17054536  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  17054537 aatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcac 17054635  T
Q  237 ccttaccttagttttgcagaa 257  Q
    ||||||||| |||||||||||    
T  17054636 ccttaccttggttttgcagaa 17054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  137 aatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctca 235  Q
    ||||| ||| |||||||||  |||||||| |||||| | ||| || ||||| | ||||||||||||||||||| || |||||||| ||||||||||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  236 cccttacctta 246  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 14056619 - 14056527
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| ||||||||| |||| |||| || ||||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaagattgcacaacaaaatcggttccta 14056527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 23482117 - 23482053
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  23482117 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 279
Target Start/End: Original strand, 25111976 - 25112064
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggtt 279  Q
    |||||||||||| ||| | | ||| ||||| |||||||||||||||||||||||||| |||| |||| |||| |||| || ||||||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaagattgcacaacaaaatcggtt 25112064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 30765925 - 30765873
Alignment:
Q  231 tctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  30765925 tctcacccttaccttagttttgcagaaagataaaacagcacaatcggttccta 30765873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 29643440 - 29643386
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||| | ||||||||||| || ||||| ||||||||||||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 21325791 - 21325730
Alignment:
Q  222 gagagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 282  Q
    ||||| ||| |||||||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21325791 gagagttagcctcacccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21325730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 21321192 - 21321132
Alignment:
Q  223 agagatagtctcacccttaccttagttttgcagaatg-attacacagcacaatcggttcct 282  Q
    |||| ||||||| |||||||||||| ||||||||| | ||| ||||||| |||||||||||    
T  21321192 agagttagtctcgcccttaccttagatttgcagaaagaattgcacagcaaaatcggttcct 21321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 20437261 - 20437024
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||||| |||    
T  20437261 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataat 20437163  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20437162 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 20437064  T
Q  207 tagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  20437063 tagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 41111884 - 41112100
Alignment:
Q  38 tcaatcaatttatg-atcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcag 136  Q
    |||||||||| ||| || ||||||||||||| ||||||| |||| |||| ||||||| ||| ||| | || |||||   |  |||| ||||  || ||||    
T  41111884 tcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaaga-aactaacaccgtctttactcatt--ccatcag 41111980  T
Q  137 aatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcac 236  Q
    ||||||||||||||||||||  |||  |||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41111981 aatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcac 41112079  T
Q  237 ccttaccttagttttgcagaa 257  Q
    |||||||||||||||||||||    
T  41112080 ccttaccttagttttgcagaa 41112100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 32651563 - 32651627
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  32651563 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 18712790 - 18712854
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||    
T  18712790 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 244  Q
    |||||||||||||||| || | ||| ||||| |||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 10433 - 10195
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  10433 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 10335  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10334 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 10236  T
Q  207 tagattatgattatcgagagatagtctcacccttaccttag 247  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  10235 tagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 8 - 247
Target Start/End: Complemental strand, 1763 - 1525
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| |||||  |||||||||||||||||||| ||||||| |||||||||||||    
T  1763 ttcatcaattcatccaatcaatcataatt-tcaatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 1665  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| | |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1664 taacatgatcaatacccattcccct-cagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaatta 1566  T
Q  207 tagattatgattatcgagagatagtctcacccttaccttag 247  Q
    |||||||||||||| ||||||||||| ||||||||||||||    
T  1565 tagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 159; Significance: 1e-84; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 2142 - 1887
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||| ||||| ||||| | | |||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||| ||||||    
T  2142 acacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattaca 2043  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttca 199  Q
    | ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| ||||||    
T  2042 agagaattaacataatcattacccatt--ccatcaaaatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttca 1945  T
Q  200 gaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1944 gaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 8819 - 8564
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattaca 100  Q
    |||||||||||||||||||| ||||| || || | | |||||||| ||||||||||||||||||||  ||||||||||||||| ||||||||| ||||||    
T  8819 acacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattaca 8720  T
Q  101 acagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaa-ttttca 199  Q
    | ||||||||||| || ||||||||||  || ||| |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| ||||||    
T  8719 agagaattaacataatcattacccatt--ccatcataatcatcatcaaaccctaaccctcaaattattttccaaaactatacaattaggtcaatttttca 8622  T
Q  200 gaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  8621 gaaattatagattatgattattgagatatagtctcacccttaccttagttttgcagaa 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 7 - 283
Target Start/End: Original strand, 17985 - 18261
Alignment:
Q  7 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaa-caga 105  Q
    ||||||||||| ||||||||  ||  |||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |||| | ||||||| ||||    
T  17985 attcatcaatttatccaatcaatccaaatt-tcaatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 18083  T
Q  106 attaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaa-ctatgcaattaggtcaattttcagaaat 204  Q
    ||||||||||  |||||| ||||||| | ||||||||||| ||||| ||||||||||||||| |||| ||| ||| ||||||||||||||||||| ||||    
T  18084 attaacatgaccattacc-atttcccgttagaatcatcattaaaccttaaccctcaatttattttcctaaagctaagcaattaggtcaattttcaaaaat 18182  T
Q  205 tatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18183 tatagattatgattattgagagatagtctcacccttaccttagttttgcagaatgattacacaacacaatcggttccta 18261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 151; Significance: 8e-80; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 7 - 257
Target Start/End: Original strand, 109 - 356
Alignment:
Q  7 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaa 106  Q
    ||||||||||| |||||| |  |||||||| |||| ||||||||||||||| ||| |||||||||||||| |||| ||||||||  ||| ||||| | ||    
T  109 attcatcaatttatccaaccaatcataatt-tcaaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  107 ttaacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaatta 206  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  208 ttaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaa-tttcagaaatta 305  T
Q  207 tagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  306 tagattatggttattgagagatagtctcacccttaccttagttttgcagaa 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 50 - 283
Target Start/End: Original strand, 30715 - 30949
Alignment:
Q  50 tgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaa 149  Q
    |||||||| |||||  |||||||| |  ||||||||| |||| |  |||||||| | ||||||||||  |||| |  ||||| ||| |||||||||||||    
T  30715 tgatcacatcaacattatagattaggaattcattctgcacatcactttacaacatatttaacatgatcgttacaccattcccctcaaaatcatcatcaaa 30814  T
Q  150 ccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagt 248  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30815 ccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagt 30914  T
Q  249 tttgcagaatgattacacagcacaatcggttccta 283  Q
    ||||||||| |||||||||||| ||||| ||||||    
T  30915 tttgcagaaggattacacagcaaaatcgattccta 30949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 3531 - 3295
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  | ||| || ||||||||||| ||||||||||||||  |||||||||| ||||||||||||||| | ||||||||| |||    
T  3531 ttcatcaattcatccaatcaattatattt-tcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacattacaacaaaat 3433  T
Q  108 taacatgatt-attacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatt 205  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||| ||||||  ||||   || |||||||||||||||||| ||||||    
T  3432 taacatgattcattaccca-ttcccctcagaatcatcatcaaaccctaaccctcaattttatc-cccaaggttaagcaattaggtcaattttccgaaatt 3335  T
Q  206 atagattat-gattatcgagagatagtctcacccttacct 244  Q
    | | |||||  ||||  |||||||||||||||||||||||    
T  3334 acatattatctattaatgagagatagtctcacccttacct 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 3859 - 3624
Alignment:
Q  8 ttcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaacagaat 107  Q
    |||||||||||||||||||  | ||| || |||||||||||||||||||| |||||  |||||||||| |||||||| |||||| | ||||||||| |||    
T  3859 ttcatcaattcatccaatcaattatattt-tcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattacaacataat 3761  T
Q  108 taacatgattattacccatttcccttcagaatcatcatcaaaccctaaccctcaa-tttatcttccaaaactatgcaattaggtcaattttcagaaatta 206  Q
    ||||||||| |||||||| | ||| |||||||||||||||||||||||||||||| |||||| | |||   || |||||||||||||||||| |||||||    
T  3760 taacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattttatcct-caaggttaagcaattaggtcaattttccgaaatta 3663  T
Q  207 tagattat-gattatcgagagatagtctcacccttacct 244  Q
     | |||||  ||||  |||||||||||||||||||||||    
T  3662 catattatctattaatgagagatagtctcacccttacct 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 56 - 252
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  56 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 155  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 1823  T
Q  156 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 252  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1822 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 56 - 252
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  56 cagcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaa 155  Q
    |||||||| ||| ||||||| ||||||||| ||||||| ||| | | | || |||||| ||  |||| ||||  || |||||||||||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcatt--ccatcagaatcatcatcaaaccctaa 5846  T
Q  156 ccctcaatttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 252  Q
    |  |||  |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5845 ctttcatattattttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagttttg 5750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 904 - 991
Alignment:
Q  164 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 251  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  904 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 164 - 251
Target Start/End: Original strand, 8049 - 8136
Alignment:
Q  164 ttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagtttt 251  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  8049 ttatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 806 - 901
Alignment:
Q  7 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 103  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 7951 - 8046
Alignment:
Q  7 attcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctgaacattatattacaaca 103  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacatcacattacaaca 8046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 3472 - 3558
Alignment:
Q  1 acacaaattcatcaattcatccaatcgctcataattctcaatcaatttatgatcacagcaacaacatagattaagttttcattctga 87  Q
    |||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3472 acacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 40587 - 40495
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttccta 40495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 45386 - 45268
Alignment:
Q  135 agaatcatcatcaaaccctaaccctca-atttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtct 233  Q
    |||||||||||||||||||||   ||| |||  | ||| |||||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||    
T  45386 agaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaa-tttcaggaattatagattatgattattgagagatagtct 45288  T
Q  234 cacccttaccttagttttgc 253  Q
    |||||||||||||| |||||    
T  45287 cacccttaccttagatttgc 45268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 135473 - 135562
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 280  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| ||| ||||| |||| ||||||| |||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaaaatcggttc 135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 22646 - 22556
Alignment:
Q  193 attttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||| | |||||||||  ||| ||||||| ||||||||||||    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaaaatcggttccta 22556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 17643 - 17723
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag-ttttgcagaatgattacacagca 270  Q
    |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| |||||||||| |||| |||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaagattgcacagca 17723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 16811 - 16875
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  16811 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 116887 - 116951
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  116887 caattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 72 - 8
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  72 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 2256 - 2212
Alignment:
Q  239 ttaccttagttttgcagaatgattacacagcacaatcggttccta 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2256 ttaccttagttttgcagaatgattacacagcacaatcggttccta 2212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 13623 - 13687
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13623 caattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 101992 - 101928
Alignment:
Q  182 caattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  101992 caattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 1453 - 1515
Alignment:
Q  195 tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaa 257  Q
    |||||||||||||| |||| ||| || ||||| ||||||||||||||||||| ||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaa 1515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 257
Target Start/End: Complemental strand, 23760 - 23559
Alignment:
Q  57 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 156  Q
    |||||||  ||||||||||   |||| |||||||| | ||||||||| | | ||||||||| ||||   ||| | |||| ||||| ||||| |||||||     
T  23760 agcaacattatagattaagaaatcatactgaacatcaaattacaacacattaaacatgattcttacatcttttctttcaaaatcagcatcacaccctaat 23661  T
Q  157 cctcaattta-tcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcag 255  Q
     ||||||||  ||||| | |||||| |  |||| | ||||||||||||||||| |||||||| ||  | ||||| || ||||||||||||||  ||||||    
T  23660 tctcaattttgtcttcaagaactattcttttagattaattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcag 23561  T
Q  256 aa 257  Q
    ||    
T  23560 aa 23559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 680 - 780
Alignment:
Q  158 ctcaatttatcttccaaaactatgcaattaggtcaatttt-cagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 256  Q
    |||||||||| ||| | |||||| |  |||||| |||||| ||||||||||| |||| ||| || || ||||| || |||||||||||||||||||||||    
T  680 ctcaatttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcaga 779  T
Q  257 a 257  Q
    |    
T  780 a 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 5941 - 5857
Alignment:
Q  163 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||| | |||||| ||||||| | ||||||||||||||||| ||||| || || || ||||| || ||||||||||||||    
T  5941 tttatcttcaagaactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 1321 - 1441
Alignment:
Q  127 ttcccttcagaatcatcatcaaaccctaaccctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgaga 225  Q
    |||| |||| ||||| |||||||||||||  |||| ||| ||| || | ||| ||  |||||| |||||||||| |||||||| || ||||| || || |    
T  1321 ttcctttcaaaatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaa 1420  T
Q  226 gatagtctcacccttacctta 246  Q
    |||||||||||||||||||||    
T  1421 gatagtctcacccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||||| |||||||| || ||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  191 caattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 5487 - 5520
Alignment:
Q  225 agatagtctcacccttaccttagttttgcagaat 258  Q
    ||||||||||||||||||||||||||||||||||    
T  5487 agatagtctcacccttaccttagttttgcagaat 5520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 256
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  175 aactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcaga 256  Q
    |||||| | ||||| | ||||||||||||||||| |||| |||||| || ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 14668 - 14620
Alignment:
Q  232 ctcacccttaccttagttttgcagaatgattacacagcacaatcggttc 280  Q
    |||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  14668 ctcacccttaccttagatttgcagaaagattgcacagcaaaatcggttc 14620  T

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Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttt 250  Q
    ||||||||| ||||||||| |||||||| || ||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 244
Target Start/End: Original strand, 73149 - 73337
Alignment:
Q  57 agcaacaacatagattaagttttcattctgaacattatattacaacagaattaacatgattattacccatttcccttcagaatcatcatcaaaccctaac 156  Q
    |||||||  ||||||||||   |||| | |||||| | ||||||||| | | ||||||||| |||| |  || | |||| ||||| ||||| |||||||     
T  73149 agcaacattatagattaagaaatcatacggaacatcaaattacaacacattaaacatgattcttacaccgtttctttcaaaatcaacatcacaccctaat 73248  T
Q  157 cctcaattt-atcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacct 244  Q
     |||||||| |||||| | | |||| | ||||| | |||||||| |||||||| |||||||| || || ||||| || |||||||||||    
T  73249 tctcaattttatcttcaagagctatcctattagattaattttcataaattatacattatgatcattgaaagataatcccacccttacct 73337  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||| | ||||||||||| |  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 135438 - 135493
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||||||||||| ||||||| ||| || ||||| |||||| ||||||||||    
T  135438 aattttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  192 aattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||||||| ||||||| ||| || ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 10634 - 10550
Alignment:
Q  163 tttatcttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttaccttag 247  Q
    ||||||||| | |||||| | ||||| | ||||||||||||||||| |||| ||| || || ||||| || ||| ||||||||||    
T  10634 tttatcttcaagaactattctattagattaattttcagaaattatacattaagatcattgaaagataatcccacacttaccttag 10550  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  190 tcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 246  Q
    ||||||||||||| ||||| ||||| || || ||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

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