View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20308_high_28 (Length: 264)
Name: NF20308_high_28
Description: NF20308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20308_high_28 |
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Alignment Details
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 3944850 - 3945085
Alignment:
| Q |
17 |
cttgtttatgtttatctatctgcaaatagtactctccatttctattaacttgagatagtgaattatttttgatagattctatatatgatagtgaattaaa |
116 |
Q |
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| T |
3944850 |
cttgtttatgtttatctatctgcaaatagtactctccatttctattaacttgagatagtgaattatttttgatagattctatatatgatagtgaattaaa |
3944949 |
T |
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| Q |
117 |
aaattgtatgtttgttattggtactttattagtaagtttgcaacacttcatacatgactagtcaaatctttacatcaattttcaaatggactcaacttag |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
3944950 |
aaattgtatgtttgttattggtactttattagtaagtttgcaacacttcatacatgattagtcaaatctttacatcaattttcaaatggactcaacttag |
3945049 |
T |
|
| Q |
217 |
atataatactatgaatatcaagattggtggaatatt |
252 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
3945050 |
atataatactatgaatatcaagattggtggaatatt |
3945085 |
T |
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