View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2030_high_23 (Length: 304)
Name: NF2030_high_23
Description: NF2030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2030_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 19 - 260
Target Start/End: Original strand, 1608753 - 1608994
Alignment:
| Q |
19 |
atgattaagaggactaagaagtttatgagctttgagaaagttattgaagagtaaagattgttgtgatctggtctttgaaattgtttttcatgatttagtg |
118 |
Q |
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| T |
1608753 |
atgattaagaggaataagaagtttattagctttgataaagttattgaagagtgaagattgttgtgatctggtctttgaaattgtttttcatgatttagtg |
1608852 |
T |
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| Q |
119 |
agaaatgagtttttatgagattttgtaaagtttgaaatttgcagagtaattaaattgaaatttggtaaagtttgaaggttttactatttgtgagacactt |
218 |
Q |
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| T |
1608853 |
agaaatgagtttttatgagattttgtaaagtttgaaatttgcagagtaattaaattgaaatttggtaaagtttgaaggttttactatttgtgagacactt |
1608952 |
T |
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| Q |
219 |
ttctttttcctcgctatggtcaatgaattataggaaaatgtg |
260 |
Q |
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| T |
1608953 |
ttctttttcctcgctatggtcaatgaattataggaaaatgtg |
1608994 |
T |
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