View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2030_high_24 (Length: 301)
Name: NF2030_high_24
Description: NF2030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2030_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 19 - 294
Target Start/End: Original strand, 43410855 - 43411130
Alignment:
| Q |
19 |
gtatcgattcttgtttgtttcccctagcagctagtttcttgccaaacattgctgagttaccggaccagatgctagatttctcagtcttccacccccactg |
118 |
Q |
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| T |
43410855 |
gtatcgattcttgtttgtttcccctagcagctagtttcttgccaaacattgctgagttaccagaccagatgctagatttctcagtcttccacccccactg |
43410954 |
T |
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| Q |
119 |
tatnnnnnnnnnnnnnnnntacattgaattaagtcagacaataaagaaatgccataaagtcaaaacatatgcagtattacgttttagtacacaagaatta |
218 |
Q |
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| T |
43410955 |
tataaaaaaaataaaaaaatacattgaattaagtcagacaataaagaaatgccataaagtcaaaacatatgcaggattacgttttagtacacaagaatta |
43411054 |
T |
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| Q |
219 |
tgagataagcaaaatatacctttcgcgagcttgaatgtgtaaattgtgtgaatgcattgttccctaaatattcttc |
294 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
43411055 |
tgagataagcaaaatatacctttcgcgagcttgaatgtgtaaattgtgtgaatgcattgttccctaaattttcttc |
43411130 |
T |
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