View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2030_high_34 (Length: 245)
Name: NF2030_high_34
Description: NF2030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2030_high_34 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 19243986 - 19244212
Alignment:
| Q |
1 |
tggattggtacatagtttgattaaacaccgttttctactatgattctgataaaaactacactttgagcttcaacaaaatcacagtattaatgaaattttg |
100 |
Q |
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| T |
19243986 |
tggattggtacatagtttgattaaacaccgttttctactatgattctgataaaaactacattttgagcttcaacaaaatcacagtattaatgaaattttg |
19244085 |
T |
|
| Q |
101 |
taccgtaaattcaaacatacactctaaatgataaaaggaattagagtttgcactagattacaaaatatcaatcatcttacttcaactcaattttaatcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19244086 |
taccgtaaattcaaacatacactctaaatgataaaaggaattagagtttgcactagattacaaaatatcaatcatcttacttcaactcaattttaatcaa |
19244185 |
T |
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| Q |
201 |
atcaatttcatttcaaattgtgagtgt |
227 |
Q |
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||||||||||||| |||||||||||| |
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| T |
19244186 |
atcaatttcatttgtaattgtgagtgt |
19244212 |
T |
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