View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2030_high_36 (Length: 241)
Name: NF2030_high_36
Description: NF2030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2030_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 49083737 - 49083513
Alignment:
| Q |
1 |
caaaatcaaacttggcggtattaccaccactgaaactacaatttgcatgattgttctttggatatttatcaaaagtggccatcaagtcaatagctccagc |
100 |
Q |
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| T |
49083737 |
caaaatcaaacttggcggtattaccaccactgaaactacaatttgcatgattgttctttggatatttatcaaaagtggccatcaagtcaatagctccagc |
49083638 |
T |
|
| Q |
101 |
agaatggtcttctagttcattattgctttgatgaatctttgtattaatatgaggatgggctttgcttaactctgttcctaacacttcatcacggttttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49083637 |
agaatggtcttctagttcattattgctttgatgaatctttgtattaatatgaggatgggctttgcttaactctgttcctaacacttcatcacggttttct |
49083538 |
T |
|
| Q |
201 |
gtttcactgtaatcatagttttgac |
225 |
Q |
| |
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|||||||| |||||||||||||||| |
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|
| T |
49083537 |
gtttcactataatcatagttttgac |
49083513 |
T |
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