View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2030_low_17 (Length: 373)

Name: NF2030_low_17
Description: NF2030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2030_low_17
NF2030_low_17
[»] chr3 (47 HSPs)
chr3 (190-284)||(37756392-37756486)
chr3 (169-284)||(166788-166904)
chr3 (169-285)||(45431627-45431744)
chr3 (169-284)||(33528184-33528300)
chr3 (169-268)||(50381714-50381814)
chr3 (171-284)||(48717415-48717529)
chr3 (174-284)||(1102675-1102786)
chr3 (174-284)||(47864641-47864752)
chr3 (190-284)||(38414905-38414999)
chr3 (191-284)||(54457176-54457269)
chr3 (169-284)||(32421348-32421464)
chr3 (169-284)||(39739274-39739390)
chr3 (169-284)||(50271730-50271845)
chr3 (169-284)||(50676846-50676962)
chr3 (178-284)||(27471513-27471620)
chr3 (171-284)||(22602182-22602296)
chr3 (169-268)||(9320954-9321054)
chr3 (169-284)||(11483613-11483729)
chr3 (169-284)||(27817047-27817162)
chr3 (233-284)||(27394572-27394623)
chr3 (176-284)||(1325310-1325420)
chr3 (169-269)||(46247260-46247364)
chr3 (169-226)||(4227753-4227810)
chr3 (169-226)||(20887778-20887835)
chr3 (207-284)||(29645806-29645883)
chr3 (189-260)||(32508796-32508869)
chr3 (169-268)||(29226326-29226426)
chr3 (169-276)||(49429461-49429568)
chr3 (171-243)||(54408542-54408614)
chr3 (233-284)||(8930956-8931007)
chr3 (233-284)||(38668193-38668244)
chr3 (173-240)||(38949682-38949749)
chr3 (176-277)||(28054716-28054817)
chr3 (176-277)||(28065141-28065242)
chr3 (242-284)||(50332937-50332979)
chr3 (169-210)||(21513289-21513330)
chr3 (188-281)||(24651145-24651237)
chr3 (227-276)||(41768432-41768481)
chr3 (169-260)||(43774185-43774278)
chr3 (176-248)||(45583477-45583550)
chr3 (169-210)||(48315043-48315084)
chr3 (169-210)||(54230118-54230159)
chr3 (205-260)||(13874836-13874892)
chr3 (189-252)||(35483289-35483353)
chr3 (196-240)||(35849512-35849556)
chr3 (178-226)||(52992068-52992116)
chr3 (205-260)||(54983707-54983763)
[»] chr1 (46 HSPs)
chr1 (174-284)||(19424051-19424162)
chr1 (169-284)||(22779223-22779339)
chr1 (169-284)||(40209894-40210010)
chr1 (169-284)||(43109217-43109333)
chr1 (169-284)||(48497192-48497308)
chr1 (169-267)||(8893860-8893959)
chr1 (169-277)||(24134610-24134719)
chr1 (169-284)||(7438621-7438737)
chr1 (169-284)||(12973257-12973373)
chr1 (169-284)||(24253622-24253738)
chr1 (179-277)||(25031483-25031582)
chr1 (214-284)||(10123032-10123102)
chr1 (169-284)||(4126899-4127015)
chr1 (169-268)||(14262716-14262816)
chr1 (169-284)||(34702292-34702408)
chr1 (169-284)||(49619972-49620088)
chr1 (169-268)||(50011507-50011607)
chr1 (233-284)||(29332349-29332400)
chr1 (169-240)||(30246019-30246090)
chr1 (169-243)||(25036254-25036328)
chr1 (169-243)||(25041466-25041540)
chr1 (169-280)||(12148556-12148668)
chr1 (174-266)||(52202260-52202352)
chr1 (221-284)||(2350354-2350417)
chr1 (175-260)||(24661989-24662075)
chr1 (174-268)||(50065015-50065110)
chr1 (190-284)||(17281051-17281144)
chr1 (175-252)||(27745164-27745241)
chr1 (190-284)||(35195590-35195684)
chr1 (190-284)||(42946446-42946540)
chr1 (180-268)||(3347698-3347787)
chr1 (169-226)||(8865858-8865915)
chr1 (169-230)||(13773172-13773233)
chr1 (169-210)||(24631840-24631881)
chr1 (174-255)||(33843175-33843256)
chr1 (174-255)||(33950723-33950804)
chr1 (169-210)||(35473953-35473994)
chr1 (169-237)||(1247259-1247327)
chr1 (169-276)||(7006592-7006700)
chr1 (169-212)||(27160495-27160539)
chr1 (169-209)||(31890769-31890809)
chr1 (220-252)||(32609263-32609295)
chr1 (233-285)||(42851515-42851567)
chr1 (169-268)||(46532490-46532590)
chr1 (169-268)||(47651872-47651971)
chr1 (189-252)||(49251406-49251470)
[»] chr4 (51 HSPs)
chr4 (169-285)||(38690666-38690783)
chr4 (169-284)||(16556451-16556567)
chr4 (169-284)||(35733374-35733490)
chr4 (169-284)||(13539819-13539933)
chr4 (190-277)||(44251313-44251399)
chr4 (168-284)||(25104326-25104443)
chr4 (174-284)||(11491198-11491309)
chr4 (169-266)||(43362165-43362263)
chr4 (169-277)||(2832057-2832166)
chr4 (188-284)||(35305001-35305098)
chr4 (169-260)||(35909031-35909124)
chr4 (205-282)||(56555585-56555662)
chr4 (169-284)||(37574273-37574388)
chr4 (169-284)||(46283122-46283238)
chr4 (169-284)||(48404116-48404232)
chr4 (228-284)||(49607610-49607666)
chr4 (169-284)||(50815707-50815823)
chr4 (169-284)||(51974747-51974863)
chr4 (225-284)||(49607933-49607992)
chr4 (188-255)||(55308044-55308111)
chr4 (190-284)||(2766737-2766831)
chr4 (190-285)||(21200550-21200646)
chr4 (169-277)||(40406946-40407056)
chr4 (169-210)||(8027416-8027457)
chr4 (188-281)||(22525409-22525501)
chr4 (236-285)||(29889756-29889805)
chr4 (174-243)||(44312776-44312845)
chr4 (178-266)||(45847923-45848012)
chr4 (205-253)||(35122081-35122129)
chr4 (174-225)||(2609403-2609454)
chr4 (182-284)||(24570223-24570326)
chr4 (221-284)||(25234837-25234900)
chr4 (190-281)||(32037589-32037680)
chr4 (183-260)||(37032181-37032260)
chr4 (194-253)||(44315512-44315571)
chr4 (174-240)||(2629588-2629654)
chr4 (169-227)||(9259491-9259549)
chr4 (179-284)||(22341841-22341947)
chr4 (169-282)||(36993041-36993155)
chr4 (169-210)||(12058320-12058361)
chr4 (169-210)||(14577526-14577567)
chr4 (169-226)||(29406361-29406418)
chr4 (169-210)||(34247441-34247482)
chr4 (169-210)||(38416058-38416099)
chr4 (235-284)||(49811387-49811436)
chr4 (169-230)||(55924786-55924847)
chr4 (237-285)||(2931133-2931181)
chr4 (169-237)||(3784916-3784983)
chr4 (214-266)||(9759417-9759469)
chr4 (169-268)||(43084447-43084547)
chr4 (169-237)||(50442740-50442807)
[»] chr2 (34 HSPs)
chr2 (169-284)||(43027155-43027271)
chr2 (173-249)||(31594380-31594457)
chr2 (221-284)||(37592201-37592264)
chr2 (178-284)||(42541165-42541271)
chr2 (169-277)||(24202150-24202259)
chr2 (169-284)||(17269912-17270028)
chr2 (169-268)||(27463522-27463621)
chr2 (169-284)||(33065236-33065352)
chr2 (169-284)||(34107495-34107610)
chr2 (205-284)||(5207130-5207208)
chr2 (178-284)||(12183714-12183821)
chr2 (233-284)||(41541519-41541570)
chr2 (169-267)||(43684279-43684377)
chr2 (169-243)||(23919469-23919543)
chr2 (169-285)||(18424130-18424244)
chr2 (169-252)||(23405200-23405283)
chr2 (233-284)||(37886204-37886255)
chr2 (169-243)||(7379592-7379666)
chr2 (169-210)||(12124546-12124587)
chr2 (169-230)||(18278422-18278483)
chr2 (169-210)||(21482538-21482579)
chr2 (169-210)||(28771583-28771624)
chr2 (169-210)||(30978363-30978404)
chr2 (169-210)||(35685080-35685121)
chr2 (169-210)||(43117209-43117250)
chr2 (188-260)||(1962846-1962918)
chr2 (178-210)||(4936574-4936606)
chr2 (178-210)||(5021663-5021695)
chr2 (205-260)||(7086290-7086346)
chr2 (189-252)||(10262759-10262823)
chr2 (169-237)||(15764934-15765002)
chr2 (169-284)||(18949664-18949779)
chr2 (169-268)||(20375593-20375693)
chr2 (171-243)||(33816408-33816480)
[»] chr8 (40 HSPs)
chr8 (174-268)||(19733064-19733159)
chr8 (27-78)||(14148335-14148386)
chr8 (174-268)||(38289230-38289325)
chr8 (190-284)||(43413865-43413959)
chr8 (174-284)||(19957300-19957411)
chr8 (169-266)||(41845426-41845524)
chr8 (169-273)||(10201262-10201367)
chr8 (169-268)||(1032570-1032670)
chr8 (169-268)||(33820390-33820490)
chr8 (174-284)||(43456632-43456742)
chr8 (175-252)||(27558882-27558958)
chr8 (169-258)||(36103927-36104017)
chr8 (169-284)||(39104607-39104722)
chr8 (169-268)||(41454822-41454922)
chr8 (176-285)||(279975-280084)
chr8 (176-285)||(635768-635877)
chr8 (176-285)||(821571-821680)
chr8 (169-284)||(4259859-4259975)
chr8 (169-284)||(10621354-10621470)
chr8 (169-268)||(22652683-22652783)
chr8 (189-252)||(27822090-27822154)
chr8 (174-284)||(8349462-8349573)
chr8 (169-240)||(20872453-20872524)
chr8 (221-284)||(39172192-39172255)
chr8 (169-243)||(2294091-2294165)
chr8 (171-268)||(5904369-5904467)
chr8 (205-255)||(37523976-37524026)
chr8 (169-284)||(44828411-44828528)
chr8 (169-260)||(4798543-4798635)
chr8 (189-260)||(10199744-10199817)
chr8 (233-266)||(11690951-11690984)
chr8 (169-210)||(23816791-23816832)
chr8 (169-210)||(37938496-37938537)
chr8 (169-246)||(38210768-38210844)
chr8 (174-239)||(40393327-40393392)
chr8 (241-281)||(3956727-3956767)
chr8 (205-260)||(13537313-13537369)
chr8 (205-260)||(13626861-13626917)
chr8 (176-240)||(25824897-25824961)
chr8 (192-284)||(27102311-27102403)
[»] chr7 (39 HSPs)
chr7 (169-284)||(15025156-15025272)
chr7 (169-284)||(24029985-24030100)
chr7 (188-284)||(5228091-5228186)
chr7 (169-284)||(9668795-9668909)
chr7 (174-268)||(12166087-12166182)
chr7 (183-268)||(35307928-35308015)
chr7 (189-276)||(36977228-36977315)
chr7 (181-281)||(43440701-43440802)
chr7 (169-285)||(46243291-46243408)
chr7 (169-284)||(14707293-14707408)
chr7 (169-268)||(40273821-40273921)
chr7 (169-284)||(48433689-48433805)
chr7 (169-268)||(25775608-25775708)
chr7 (169-284)||(33248781-33248897)
chr7 (169-260)||(44986594-44986686)
chr7 (182-284)||(4956071-4956174)
chr7 (206-284)||(10624777-10624854)
chr7 (169-284)||(23602274-23602390)
chr7 (169-284)||(27454011-27454128)
chr7 (169-285)||(37665744-37665861)
chr7 (169-277)||(44662449-44662558)
chr7 (174-284)||(6548691-6548801)
chr7 (233-284)||(32376504-32376555)
chr7 (317-364)||(37081308-37081355)
chr7 (169-226)||(8249705-8249763)
chr7 (181-282)||(48258165-48258266)
chr7 (169-260)||(5787462-5787554)
chr7 (168-249)||(21461666-21461747)
chr7 (175-240)||(22548221-22548286)
chr7 (175-240)||(27788279-27788344)
chr7 (175-240)||(27791435-27791500)
chr7 (169-218)||(37411754-37411803)
chr7 (169-226)||(38151348-38151405)
chr7 (200-248)||(39844339-39844388)
chr7 (169-281)||(42554634-42554747)
chr7 (169-260)||(8133798-8133890)
chr7 (178-226)||(21762901-21762949)
chr7 (228-284)||(26455984-26456040)
chr7 (169-240)||(42338270-42338342)
[»] chr5 (25 HSPs)
chr5 (169-284)||(17077361-17077477)
chr5 (190-284)||(3294105-3294199)
chr5 (169-260)||(9628117-9628209)
chr5 (169-284)||(38503236-38503352)
chr5 (169-277)||(31250147-31250256)
chr5 (169-284)||(20191442-20191557)
chr5 (169-268)||(43227866-43227966)
chr5 (169-259)||(31154250-31154341)
chr5 (178-268)||(34729481-34729571)
chr5 (179-284)||(15470600-15470706)
chr5 (173-285)||(31154097-31154209)
chr5 (169-284)||(12256475-12256582)
chr5 (174-284)||(15680880-15680991)
chr5 (191-268)||(4395846-4395923)
chr5 (205-260)||(2029130-2029186)
chr5 (169-229)||(41083543-41083603)
chr5 (188-246)||(3867770-3867828)
chr5 (175-252)||(18872528-18872605)
chr5 (168-229)||(31991795-31991857)
chr5 (169-210)||(11017177-11017218)
chr5 (171-208)||(13547450-13547487)
chr5 (169-218)||(18928724-18928773)
chr5 (169-260)||(32158416-32158508)
chr5 (189-263)||(33800913-33800989)
chr5 (221-260)||(43166722-43166762)
[»] chr6 (19 HSPs)
chr6 (178-284)||(5641669-5641775)
chr6 (169-284)||(6228239-6228355)
chr6 (169-252)||(20568268-20568351)
chr6 (169-284)||(17216958-17217074)
chr6 (221-284)||(7164747-7164810)
chr6 (169-277)||(20415548-20415657)
chr6 (169-281)||(24794877-24794990)
chr6 (178-284)||(1128395-1128505)
chr6 (169-284)||(18903346-18903462)
chr6 (174-284)||(29321955-29322066)
chr6 (169-229)||(8439679-8439739)
chr6 (205-252)||(1488125-1488172)
chr6 (181-274)||(9455852-9455945)
chr6 (169-243)||(15305096-15305170)
chr6 (221-274)||(8330480-8330533)
chr6 (176-268)||(9357163-9357256)
chr6 (189-260)||(19417842-19417915)
chr6 (205-249)||(18631509-18631553)
chr6 (169-284)||(19221700-19221816)
[»] scaffold0001 (1 HSPs)
scaffold0001 (169-284)||(419712-419828)
[»] scaffold0250 (1 HSPs)
scaffold0250 (169-240)||(15009-15080)
[»] scaffold0010 (1 HSPs)
scaffold0010 (173-228)||(132267-132322)
[»] scaffold0039 (1 HSPs)
scaffold0039 (189-260)||(101851-101924)
[»] scaffold0005 (1 HSPs)
scaffold0005 (169-210)||(239808-239849)
[»] scaffold0011 (1 HSPs)
scaffold0011 (190-266)||(15328-15403)


Alignment Details
Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 37756486 - 37756392
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    ||||||||||||||||||||||| |  ||| |||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||| ||||||    
T  37756486 ggataatgcataatttatgcaggggctggggttcgaaccccaaacaccccacttattcacctttaacgtgagtttctctcgccgctaggctactt 37756392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 166788 - 166904
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||||||||| ||||||||||||||||||||| | |||| |||||| |||| ||||| || |||||||||||||| |||| |||||     
T  166788 tgagcttagctcacttggtaagggataatgcataatttatgcaggggccggggttcgaaccccagacacctcacttattcacctttaaagtgaatttctt 166887  T
Q  268 tggccgctagactactt 284  Q
    | |||||||| ||||||    
T  166888 tagccgctaggctactt 166904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 285
Target Start/End: Original strand, 45431627 - 45431744
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||||||||| ||||||| || |||||||||| ||| || |||||| |||  |||||||| ||||||||||||||||||| |||| |    
T  45431627 tgagcttagctcacttggtaagggataatgcgtattttatgcaggggtcagggttcgaaccccggacaccccacttattcacctttaaggtgaatttccc 45431726  T
Q  268 tggccgctagactactta 285  Q
    | |||||||| |||||||    
T  45431727 tagccgctaggctactta 45431744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 33528300 - 33528184
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||||| |||||| |  ||| |||||| |||| |||||||| ||||||| ||||||||||| ||||||    
T  33528300 tgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatttctc 33528201  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  33528200 tagccactaggctactt 33528184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 50381714 - 50381814
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||||||||||||| |||||||| ||| |||||||| |||||| ||||||||||  |||||||| ||||||| ||||||||||| ||||||    
T  50381714 tgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcccggacaccccacttattcatctttaaggtgaatttctc 50381813  T
Q  268 t 268  Q
    |    
T  50381814 t 50381814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 171 - 284
Target Start/End: Original strand, 48717415 - 48717529
Alignment:
Q  171 agtttagctcatttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctg 269  Q
    |||||| ||||||||||||||| |||| ||| || |||||||| || ||| |||||| ||||||||||||| || |||| ||||||||||| ||||||      
T  48717415 agtttaactcatttggtaaggaataatacattatgtatgcaggggtaggggttcgaaccccaaacaccccactttttcatctttaaggtgaatttctcca 48717514  T
Q  270 gccgctagactactt 284  Q
    ||||||| |||||||    
T  48717515 gccgctaaactactt 48717529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 1102786 - 1102675
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    ||||||||  |||||||| ||||||||||||||||||||| | |||  |||||| |    |||||||| ||||||||||||||||||| ||||||| |||    
T  1102786 ttagctcacctggtaagggataatgcataatttatgcaggggacggagttcgaaccatggacaccccacttattcacctttaaggtgaatttctctagcc 1102687  T
Q  273 gctagactactt 284  Q
    ||||| ||||||    
T  1102686 gctaggctactt 1102675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 284
Target Start/End: Original strand, 47864641 - 47864752
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    |||||||||||||||||| |||||||| ||| | |||||| || ||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||| |||    
T  47864641 ttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagcc 47864740  T
Q  273 gctagactactt 284  Q
     |||| ||||||    
T  47864741 actaggctactt 47864752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 38414905 - 38414999
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||||| | |||||||| ||| || || |||  |  ||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  38414905 ggataatgcatattatatgcaggggtcagggtttgaactctgaacaccccacttattcacctttaaggtgaatttctctggccgctaggctactt 38414999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 54457176 - 54457269
Alignment:
Q  191 gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||||||||||| ||| |  ||| ||  || |||  |||||||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  54457176 gataatgcataatttatgtaggagctggggtttaaaccccggacaccccatttattcacctttaaggtgaatttctctagccgctaggctactt 54457269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 32421348 - 32421464
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||||||||| |||||||| |||||||||||| |||||||| |||||| |||||| | | ||| ||||| ||||||| ||||||| ||| ||| ||    
T  32421348 tgagcttagctcatctggtaagggataatgcataatatatgcaggggtcggggttcgaacctcgaactccccacttattcatctttaagatgaatttttc 32421447  T
Q  268 tggccgctagactactt 284  Q
    | ||| ||| |||||||    
T  32421448 tagccactaaactactt 32421464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 39739274 - 39739390
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | ||||||  | ||| |||||| |||  ||||| || ||||||| ||||||||||| ||||||    
T  39739274 tgagcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccccggacacctcacttattcatctttaaggtgaatttctc 39739373  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||||||||||    
T  39739374 tagccactagactactt 39739390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 50271730 - 50271845
Alignment:
Q  169 tgagtttagctcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||||||||||||||||| ||||||||||  | |||||||| | || | |||||| |||  ||| |||| ||||||||||||||||||| ||||||    
T  50271730 tgagcttagctcatttggtaagagataatgcatt-tgtatgcaggggccgtggttcgaaccccgtacatcccacttattcacctttaaggtgaatttctc 50271828  T
Q  268 tggccgctagactactt 284  Q
    |  ||||||||||||||    
T  50271829 taaccgctagactactt 50271845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 50676962 - 50676846
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||||||| |||| ||||||||| | ||| |||| | |||| ||| || ||| |||||| ||| ||||||||| ||||||||||||||||||| ||||||    
T  50676962 tgagtttaactcacttggtaagggacaatacatattatatgtaggggttggggttcgaaccccgaacaccccacttattcacctttaaggtgaatttctc 50676863  T
Q  268 tggccgctagactactt 284  Q
    |  || |||||||||||    
T  50676862 taaccactagactactt 50676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 27471513 - 27471620
Alignment:
Q  178 ctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgcta 276  Q
    |||||||||||||| |||||||||||| | | |||| || ||| |||||| |||  |||||||| ||||||| ||||||||| | ||||||| ||| |||    
T  27471513 ctcatttggtaagggataatgcataatatgtacaggggttggggttcgaaccccggacaccccacttattcatctttaaggtaaatttctctagccacta 27471612  T
Q  277 gactactt 284  Q
    ||||||||    
T  27471613 gactactt 27471620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 284
Target Start/End: Complemental strand, 22602296 - 22602182
Alignment:
Q  171 agtttagctcatttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctg 269  Q
    |||||||||||||||||||||| ||||||| ||| | || ||| | || | ||||||||||| ||| | || ||||||| ||||||||||| |||||||     
T  22602296 agtttagctcatttggtaaggaataatgcacaatatgtgtaggggacgaggttcgaatcccagacatcgcacttattcatctttaaggtgaatttctcta 22602197  T
Q  270 gccgctagactactt 284  Q
    ||| |||| ||||||    
T  22602196 gccactaggctactt 22602182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 9321054 - 9320954
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    ||||||||||||||||| ||| |||||||| | ||||| |||||| || ||| |||||| ||| ||||||||| ||||||| ||| ||| ||| ||||||    
T  9321054 tgagtttagctcatttgataagggataatgtacaatttgtgcaggggttggggttcgaaacccgaacaccccacttattcatcttaaagatgaatttctc 9320955  T
Q  268 t 268  Q
    |    
T  9320954 t 9320954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 11483613 - 11483729
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | | || ||||||  ||  |||||||| ||||||| ||||||||||| ||||||    
T  11483613 tgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccagggttcgaactccggacaccccacttattcatctttaaggtgaatttctc 11483712  T
Q  268 tggccgctagactactt 284  Q
    | ||  |||||||||||    
T  11483713 tagcaactagactactt 11483729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 27817162 - 27817047
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||||||||||||| |||||||| ||||| |||||| | |||  |||||| |||  |||||||||||||||| ||||||| ||| ||||||    
T  27817162 tgagcttacctcatttggtaagggataatgcacaatttgtgcaggggccggagttcgaa-cccggacaccccatttattcatctttaagttgaatttctc 27817064  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  27817063 tagccactaggctactt 27817047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 27394572 - 27394623
Alignment:
Q  233 acaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||| ||||||    
T  27394572 acaccccacttattcacctttaaggtgaatttctctagccgctaggctactt 27394623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 1325420 - 1325310
Alignment:
Q  176 agctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccc-atttattcacctttaaggtgagtttctctggccg 273  Q
    |||| ||||||||||| |||||||| ||| ||| ||||  |||||||||||| |||  ||||||| ||||||||| ||||||| ||| ||||| | |||     
T  1325420 agcttatttggtaagggataatgcacaatatatacagggatcgggattcgaaccccggacacccccatttattcatctttaagatgaatttctttagcca 1325321  T
Q  274 ctagactactt 284  Q
    |||||||||||    
T  1325320 ctagactactt 1325310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 46247260 - 46247364
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt---attcacctttaaggtgagttt 264  Q
    |||| |||||||||||||||||| |||||||| ||||| |||||| |  ||| |||||| |||| |||||||| ||   ||||| ||||||||||| |||    
T  46247260 tgagcttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttcttattcatctttaaggtgaattt 46247359  T
Q  265 ctctg 269  Q
    |||||    
T  46247360 ctctg 46247364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 4227810 - 4227753
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaa 226  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||| |||||| ||||||    
T  4227810 tgagtttagctcagttggtagggacattgcataatttatgcaggggtcggggttcgaa 4227753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 20887835 - 20887778
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaa 226  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||| |  ||||||||||    
T  20887835 tgagtttagctcagttggtagggatattgcataatttatgcaggggcagggattcgaa 20887778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 207 - 284
Target Start/End: Complemental strand, 29645883 - 29645806
Alignment:
Q  207 tgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||| ||| |||||||||||    
T  29645883 tgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagccactagactactt 29645806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 32508869 - 32508796
Alignment:
Q  189 aggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||||||||||| ||| |||||||| |||||| |||||| ||| ||||||||| ||||||||||| ||||||||    
T  32508869 aggataatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcaccttataaggtga 32508796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 29226326 - 29226426
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| ||||  || ||| | |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  29226326 tgagcttagctcatttggtaagggataacacacaatatgtgcaggggccggggttcgaaccccgtacaccccacttattcatctttaaggtgaatttctc 29226425  T
Q  268 t 268  Q
    |    
T  29226426 t 29226426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 49429461 - 49429568
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||||||||||||| |||||||||  | ||||||||   | || |||||| |||  |||||||| ||||||||||||||||||| ||||||    
T  49429461 tgagcttaactcatttggtaagggataatgcatt-tgtatgcagggaccagggttcgaaccccggacaccccacttattcacctttaaggtgaatttctc 49429559  T
Q  268 tggccgcta 276  Q
    | |||||||    
T  49429560 tagccgcta 49429568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 54408614 - 54408542
Alignment:
Q  171 agtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt 243  Q
    |||||||||||||||| | ||| | ||||||||||||||||  |||||| |||||| |||  |||||||||||    
T  54408614 agtttagctcatttggcagggacattgcataatttatgcagaggtcggggttcgaaccccggacaccccattt 54408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 8931007 - 8930956
Alignment:
Q  233 acaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||| |||||||||||||| |||| ||||||| |||||||| ||||||    
T  8931007 acaccccacttattcacctttaaagtgaatttctctagccgctaggctactt 8930956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 38668193 - 38668244
Alignment:
Q  233 acaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||| ||||||| ||||||||||| ||||||| ||| |||||||||||    
T  38668193 acaccccacttattcatctttaaggtgaatttctctagccactagactactt 38668244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 38949682 - 38949749
Alignment:
Q  173 tttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    ||||||||| |||||| ||| | ||||||||||||||||| | |||| |||||| ||| |||||||||    
T  38949682 tttagctcagttggtagggacattgcataatttatgcaggggccggggttcgaaccccgaacacccca 38949749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 28054817 - 28054716
Alignment:
Q  176 agctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgc 274  Q
    |||||| ||||||||| ||| ||||||||||||||||| ||| |  |||||| |||| |||||||| ||||| | | |||||||||  |||||| |||||    
T  28054817 agctcacttggtaagggatattgcataatttatgcaggggtcagagttcgaaccccagacaccccacttatttatccttaaggtga-attctctagccgc 28054719  T
Q  275 tag 277  Q
    |||    
T  28054718 tag 28054716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 277
Target Start/End: Complemental strand, 28065242 - 28065141
Alignment:
Q  176 agctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgc 274  Q
    |||||| ||||||||| ||| ||||||||||||||||| ||| |  |||||| |||| |||||||| ||||| | | |||||||||  |||||| |||||    
T  28065242 agctcacttggtaagggatattgcataatttatgcaggggtcagagttcgaaccccagacaccccacttatttatccttaaggtga-attctctagccgc 28065144  T
Q  275 tag 277  Q
    |||    
T  28065143 tag 28065141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 50332979 - 50332937
Alignment:
Q  242 ttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    ||||||||||||||| ||| ||||||| |||||||||||||||    
T  50332979 ttattcacctttaagatgaatttctctagccgctagactactt 50332937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 21513289 - 21513330
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    |||| |||||||| |||||||||| |||||||||||||||||    
T  21513289 tgagcttagctcagttggtaaggacaatgcataatttatgca 21513330  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 24651145 - 24651237
Alignment:
Q  188 aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagacta 281  Q
    ||||||||||| || | |||||| | |||| |||||||| |||| | ||| || ||||||||||||||||||| |||||||  ||||| |||||    
T  24651145 aaggataatgcgta-tatatgcaagggtcgagattcgaaccccagatacctcacttattcacctttaaggtgaatttctctaaccgctggacta 24651237  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 41768432 - 41768481
Alignment:
Q  227 tcccaaacaccccatttattcacctttaaggtgagtttctctggccgcta 276  Q
    |||| |||| || ||||||||||||||||||||| ||||||| |||||||    
T  41768432 tcccgaacatcctatttattcacctttaaggtgaatttctctagccgcta 41768481  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 43774185 - 43774278
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    ||||| ||||||| |||| | ||| |||||||  || |||||||| |||||| |||||| |||| |||||||| ||||||||||| ||||||||    
T  43774185 tgagtatagctcagttggcagggacaatgcattgttatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataaggtga 43774278  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 45583550 - 45583477
Alignment:
Q  176 agctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattca 248  Q
    |||||||||||||||| |||||||||||| |||  ||| ||  || ||||||||||| |||||||| |||||||    
T  45583550 agctcatttggtaagggataatgcataatatatataggggttagggttcgaatcccagacaccccacttattca 45583477  T

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Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 48315084 - 48315043
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    |||| |||||||| ||||||||||||||||||||| ||||||    
T  48315084 tgagcttagctcagttggtaaggataatgcataatatatgca 48315043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 54230159 - 54230118
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  54230159 tgagtttagctcagttggtaaggacaatgcataatatatgca 54230118  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 13874892 - 13874836
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||||||| |||||| ||| ||||||| ||| |||||||||||||||| ||||||||    
T  13874892 tatgcaggggtcggggttcaaatcccagacatcccatttattcaccttataaggtga 13874836  T

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Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 35483289 - 35483353
Alignment:
Q  189 aggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    |||| ||||||| ||| |||||||| |||||| ||||||||||  |||||||| |||||||||||    
T  35483289 aggacaatgcattattatatgcaggggtcggggttcgaatcccggacaccccacttattcacctt 35483353  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 35849512 - 35849556
Alignment:
Q  196 tgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    ||||||||||||||||| | |||| |||||| |||||||||||||    
T  35849512 tgcataatttatgcaggggccggggttcgaaccccaaacacccca 35849556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 52992116 - 52992068
Alignment:
Q  178 ctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaa 226  Q
    |||| |||||| ||||| ||||||||||||||| | |||||||||||||    
T  52992116 ctcagttggtagggatattgcataatttatgcaagggtcgggattcgaa 52992068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 54983763 - 54983707
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||||||| |||||| |||||| |||  |||||||||||||||||||| ||||||||    
T  54983763 tatgcaggggtcggggttcgaaccccggacaccccatttattcaccttataaggtga 54983707  T

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Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 174 - 284
Target Start/End: Original strand, 19424051 - 19424162
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    |||||||||||| ||||| |||||||||| | |||||||| |||||| |||||| |||  |||||||| ||||||||||||||||||| ||||||| |||    
T  19424051 ttagctcatttgataagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagcc 19424150  T
Q  273 gctagactactt 284  Q
    ||||| ||||||    
T  19424151 gctaggctactt 19424162  T

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Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 22779223 - 22779339
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||||||||| |||||||||| ||||| |||| |||||| |||||| ||||||||||||| ||||||||||||||  ||| ||||||    
T  22779223 tgagcttagctcacttggtaagggataatgcatattttatacaggagtcggggttcgaaccccaaacaccccacttattcacctttaaaatgaatttctc 22779322  T
Q  268 tggccgctagactactt 284  Q
    | |||  ||||||||||    
T  22779323 tagccaatagactactt 22779339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 40210010 - 40209894
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||| ||| ||||||||| | |||||||| | |||| ||| ||||   |||||| |||||||||| ||||| |||||||||||||||| ||||||    
T  40210010 tgagcttagatcacttggtaagggacaatgcatattatatgtaggggtcgaagttcgaaccccaaacacctcattttttcacctttaaggtgaatttctc 40209911  T
Q  268 tggccgctagactactt 284  Q
    ||||| |||||||||||    
T  40209910 tggccactagactactt 40209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 43109333 - 43109217
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| |||||| |||  ||||| |||||||||| ||||||||||| ||||||    
T  43109333 tgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccggggttcgaaccccggacacctcatttattcatctttaaggtgaatttctc 43109234  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  43109233 tagccactaggctactt 43109217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 48497308 - 48497192
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    ||||||||||||||||||||||| |||||||| ||| | |||||| | |||  ||||||||||  |||| ||||||||||| ||||||||| | ||||||    
T  48497308 tgagtttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcgaatcccggacactccatttattcatctttaaggtaaatttctc 48497209  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  48497208 tagccactaggctactt 48497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 8893860 - 8893959
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||| ||||||||||||| |||||||| ||| | | |||| |||||| |||||| ||||||||||||| ||||||| ||||||||||| ||||||    
T  8893860 tgagcttagttcatttggtaagggataatgcacaatatgtacaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttctc 8893959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 24134719 - 24134610
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  24134719 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 24134620  T
Q  268 tggccgctag 277  Q
    | ||| ||||    
T  24134619 tagccactag 24134610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 7438621 - 7438737
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||||| || ||| |||||| ||||||  ||  |||||||| ||||||| ||| ||||||| |||||     
T  7438621 tgagcttagctcatttggtaagggataatgcacaatttgtgtaggggtcggggttcgaactccggacaccccacttattcatcttaaaggtgaatttctt 7438720  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||||||||||    
T  7438721 tagccactagactactt 7438737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 12973373 - 12973257
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||| | || ||||| ||  ||  |||||||| ||||||| ||||||||| | |||||     
T  12973373 tgagtttagctcatttggtaagggataatgcacaatatatgcaggggccgagattcaaactcctgacaccccacttattcatctttaaggtaaatttctt 12973274  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||||||||||    
T  12973273 tagccactagactactt 12973257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 24253738 - 24253622
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||| | || ||| |  | |||||| |||||||| ||| ||||||    
T  24253738 tgagcttagctcacttgataagggataatgcataatttatgcaggggtcgggattcgaacctcagacatcttacttattcgcctttaagatgaatttctc 24253639  T
Q  268 tggccgctagactactt 284  Q
    |  ||| ||||||||||    
T  24253638 taaccgttagactactt 24253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 25031582 - 25031483
Alignment:
Q  179 tcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctag 277  Q
    |||||||||||| ||||||||||||| | |||||| | |||| ||||||| ||  |||||||| ||||||| ||||||||||| ||||||| ||| ||||    
T  25031582 tcatttggtaagagataatgcataatatgtgcaggggccggggttcgaattccggacaccccacttattcatctttaaggtgaatttctctagccactag 25031483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 284
Target Start/End: Complemental strand, 10123102 - 10123032
Alignment:
Q  214 gtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||| |||||| ||||||||||||| ||||||| ||||||||||| ||||||| ||| |||| ||||||    
T  10123102 gtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttctctagccactaggctactt 10123032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 4126899 - 4127015
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||  | ||   || |||  ||  |||||||||||||||| ||||||||||| ||| ||    
T  4126899 tgagtttagctcatttggtaagggataatgcacaatatatgcagaggccgatgtttgaacaccggacaccccatttattcatctttaaggtgaatttatc 4126998  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||||||||||    
T  4126999 tagccactagactactt 4127015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 14262816 - 14262716
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||||||| ||||| |||||||| ||| |||||||| |||||| |||||| |||  |||||| | ||||||| ||||||||||| ||||||    
T  14262816 tgagattaactcatttgataagggataatgcacaatatatgcaggggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaatttctc 14262717  T
Q  268 t 268  Q
    |    
T  14262716 t 14262716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 34702408 - 34702292
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| |||||| |||  ||||| || ||||||| ||||||| ||| |||||     
T  34702408 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacacctcacttattcatctttaagatgaatttctt 34702309  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||||||||||    
T  34702308 tagccactagactactt 34702292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 49619972 - 49620088
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||| |||||||||| ||| | |||||| |||||| |||  | |||  |||||||| ||||||| |||||| |||| ||||||    
T  49619972 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcagaccccggacaccccacttattcatctttaaagtgaatttctc 49620071  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  49620072 tagccactaggctactt 49620088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 50011507 - 50011607
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| |  ||| |||||| |||| ||| |||| ||||||| ||||||||||| ||||||    
T  50011507 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttattcatctttaaggtgaatttctc 50011606  T
Q  268 t 268  Q
    |    
T  50011607 t 50011607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 29332349 - 29332400
Alignment:
Q  233 acaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||| ||||||    
T  29332349 acaccccacttattcacctttaaggtgaatttctctagccgctaggctactt 29332400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 30246090 - 30246019
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    |||| ||||||||||||||| ||| | ||||||||| ||||||| ||||||||||||| ||| || ||||||    
T  30246090 tgagcttagctcatttggtagggacattgcataattgatgcaggggtcgggattcgaaccccgaatacccca 30246019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 25036328 - 25036254
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt 243  Q
    ||||||||||||| |||| | | | | ||||||||||||||||| | ||||||||||| ||| ||||||||||||    
T  25036328 tgagtttagctcagttggcaggaacattgcataatttatgcaggggccgggattcgaaccccgaacaccccattt 25036254  T

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Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 25041540 - 25041466
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt 243  Q
    ||||||||||||| |||| | | | | ||||||||||||||||| | ||||||||||| ||| ||||||||||||    
T  25041540 tgagtttagctcagttggcaggaacattgcataatttatgcaggggccgggattcgaaccccgaacaccccattt 25041466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 12148668 - 12148556
Alignment:
Q  169 tgagtttagctcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||  |||| ||||||| | ||| | |||||| |||||  ||| || |||| |||||||| ||||||| ||||||||||| ||||||    
T  12148668 tgagcttagctcattttataagcgataatgtacaatatgtgcaggggtcggagttcaaaccccagacaccccacttattcatctttaaggtgaatttctc 12148569  T
Q  268 tggccgctagact 280  Q
    ||| | |||||||    
T  12148568 tggacactagact 12148556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 266
Target Start/End: Complemental strand, 52202352 - 52202260
Alignment:
Q  174 ttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttct 266  Q
    |||||||| ||||||  ||||||||||||| ||| | || |||||| |||||||||| || ||| || ||||||||||| ||| ||| |||||    
T  52202352 ttagctcagttggtagagataatgcataatatatactggggtcggggttcgaatcccgaatacctcacttattcaccttaaagatgaatttct 52202260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 2350417 - 2350354
Alignment:
Q  221 ttcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||| ||| ||||||||| |||||||||||||| |||| ||||| | |||||||| ||||||    
T  2350417 ttcgaaccccgaacaccccacttattcacctttaaagtgaatttctttagccgctaggctactt 2350354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 24661989 - 24662075
Alignment:
Q  175 tagctcatttggtaaggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    ||||||| |||||| ||| ||||||| ||| |||||||| ||| ||||||||| |||| |||||||||||||||| ||| ||||||||    
T  24661989 tagctcaattggta-ggacaatgcattattatatgcaggggtcaggattcgaaccccagacaccccatttattcaacttataaggtga 24662075  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 50065015 - 50065110
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    |||||||||||| ||||| |||||||| ||| | ||||||   |||| |||||||| |  |||||||| ||||||| ||||||||||| |||||||    
T  50065015 ttagctcatttgataagggataatgcacaatatgtgcagggaccggggttcgaatctcggacaccccacttattcatctttaaggtgaatttctct 50065110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 17281051 - 17281144
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||||| | |||| ||| || | |||||||||| |  |||||| | ||||||||||||| | ||| || ||||||||||||||||||||    
T  17281051 ggataatgcatattatatggaggggttgagattcgaatcacggacacccgacttattcacctttaggatgaatt-ctctggccgctagactactt 17281144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 27745164 - 27745241
Alignment:
Q  175 tagctcatttggtaaggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    |||||||||||||| ||| ||||||| ||| ||||||||  ||||| |||||| |||  ||||||||||||||||||||    
T  27745164 tagctcatttggta-ggaaaatgcattattatatgcagggatcggggttcgaaccccggacaccccatttattcacctt 27745241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 35195684 - 35195590
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||||| | ||||||||   | || |||||| |||  |||| ||| ||||||||||||||||| | ||||||| |||||||| ||||||    
T  35195684 ggataatgcatattatatgcagggaccagggttcgaaccccgtacactccacttattcacctttaaggtaaatttctctagccgctaggctactt 35195590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 42946540 - 42946446
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||||| | |||||||| |  ||| || ||| |||  |||||||| ||||||||||| ||||||| ||||||| |||| ||| ||||||    
T  42946540 ggataatgcatattatatgcaggggctggggtttgaaccccggacaccccacttattcaccttaaaggtgaatttctctagccgttaggctactt 42946446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 268
Target Start/End: Complemental strand, 3347787 - 3347698
Alignment:
Q  180 catttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    |||||||||| |||||||| | ||| | | |||| |||||| |||||| |||  |||||||| ||||||| ||||||||||| |||||||    
T  3347787 catttggtaatggataatgtacaatatgttcaggagtcggggttcgaaccccgtacaccccacttattcatctttaaggtgaatttctct 3347698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 8865858 - 8865915
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaa 226  Q
    |||| |||||||| |||||| ||||| |||||| | |||||||| |||||||||||||    
T  8865858 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcgggattcgaa 8865915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 13773172 - 13773233
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatccc 230  Q
    ||||||||||||| |||||| ||||| |||||| | |||||||| | |||| ||||||||||    
T  13773172 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaatccc 13773233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 24631840 - 24631881
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    |||||||| |||| ||||||||||||||||||||| ||||||    
T  24631840 tgagtttaactcagttggtaaggataatgcataatatatgca 24631881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 33843256 - 33843175
Alignment:
Q  174 ttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaa 255  Q
    |||||||| ||| ||  |||| ||||||||||||||||  |||||| |||||| ||| ||||||||| || ||||| |||||    
T  33843256 ttagctcagttgatagagatattgcataatttatgcagaggtcggggttcgaaccccgaacaccccacttcttcacgtttaa 33843175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 33950723 - 33950804
Alignment:
Q  174 ttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaa 255  Q
    |||||||| ||| ||  |||| ||||||||||||||||  |||||| |||||| ||| ||||||||| || ||||| |||||    
T  33950723 ttagctcagttgatagagatattgcataatttatgcagaggtcggggttcgaaccccgaacaccccacttcttcacgtttaa 33950804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 35473953 - 35473994
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    |||| |||||||| ||||||||||||||||||||| ||||||    
T  35473953 tgagcttagctcaattggtaaggataatgcataatatatgca 35473994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 1247259 - 1247327
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacc 237  Q
    |||| ||| |||| ||| |||||||| ||||||||||||||||| |||| | |||||| |||| |||||    
T  1247259 tgagcttaactcagttgataaggatattgcataatttatgcaggggtcgaggttcgaaccccagacacc 1247327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 276
Target Start/End: Original strand, 7006592 - 7006700
Alignment:
Q  169 tgagtttagctcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    ||||| ||||||| |||||||| ||||||||||| | |||||||  |  ||| || ||| ||| || |||| |||||||||| ||||| |||| ||| ||    
T  7006592 tgagtatagctcacttggtaagagataatgcatattatatgcagaggctggggtttgaaccccgaatacccaatttattcacatttaaagtgaatttatc 7006691  T
Q  268 tggccgcta 276  Q
    |||||||||    
T  7006692 tggccgcta 7006700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 27160495 - 27160539
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcagg 212  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||    
T  27160495 tgagtttagctcatttagtaagggataatgcataatatatgcagg 27160539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 31890809 - 31890769
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgc 209  Q
    ||||||||||||| |||||||||| |||||||||| |||||    
T  31890809 tgagtttagctcagttggtaaggacaatgcataatatatgc 31890769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 32609295 - 32609263
Alignment:
Q  220 attcgaatcccaaacaccccatttattcacctt 252  Q
    |||||||||||||||||||||||||||| ||||    
T  32609295 attcgaatcccaaacaccccatttattcgcctt 32609263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 285
Target Start/End: Original strand, 42851515 - 42851567
Alignment:
Q  233 acaccccatttattcacctttaaggtgagtttctctggccgctagactactta 285  Q
    |||||| ||||||| ||||||||||||| |||||||  |||||| ||||||||    
T  42851515 acaccctatttatttacctttaaggtgaatttctctaaccgctaaactactta 42851567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 46532590 - 46532490
Alignment:
Q  169 tgagtttagctcatttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| ||||||||||||||| ||||| || || ||||| || | |||||||||||   || |||||||| |  |||||||||||||||| ||||||    
T  46532590 tgagcttaactcatttggtaaggaataatgtattatgtatgctggggccgggattcgaacttcagacaccccactatttcacctttaaggtgaatttctc 46532491  T
Q  268 t 268  Q
    |    
T  46532490 t 46532490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 47651872 - 47651971
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||| |||||||||| ||| | |||||| |  ||| ||||||||| | ||| |||| |||||||  |||||||||| ||||||    
T  47651872 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaatcctagacatcccacttattca-ttttaaggtgaatttctc 47651970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 49251470 - 49251406
Alignment:
Q  189 aggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    |||| ||||||| ||| |||||||| |||||| |||||| |||| |||||||| |||||||||||    
T  49251470 aggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcacctt 49251406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 169 - 285
Target Start/End: Original strand, 38690666 - 38690783
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||||||||| |||||||||| | |||||||| |||||| |||||| |||  |||||||| |||||| |||||||||||| ||||||    
T  38690666 tgagcttagctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattctcctttaaggtgaatttctc 38690765  T
Q  268 tggccgctagactactta 285  Q
    | |||||||| |||||||    
T  38690766 tagccgctaggctactta 38690783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 16556451 - 16556567
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| |||||| |||||| ||| ||||||||| ||||||| ||||||||||| ||||||    
T  16556451 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccccgaacaccccacttattcatctttaaggtgaatttctc 16556550  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  16556551 tagccactaggctactt 16556567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 35733374 - 35733490
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||| | ||||||||| |||| |||||||| |||||||  ||| |||| |||| ||  |||||||| |||||||||||||||||||||||||     
T  35733374 tgagcttagcttacttggtaagggataacgcataattgatgcagggctcgagattggaattccggacaccccacttattcacctttaaggtgagtttctt 35733473  T
Q  268 tggccgctagactactt 284  Q
    | |||||||||||||||    
T  35733474 tagccgctagactactt 35733490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 13539933 - 13539819
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||||||||| |||||||||| ||||||||||     || |||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  13539933 tgagcttagctcacttggtaagggataatgcata-tttatgcagggactagggttcgaaccccaaacacctcatttattcacctt-aaggtgaatttctc 13539836  T
Q  268 tggccgctagactactt 284  Q
    |||||||||| ||||||    
T  13539835 tggccgctaggctactt 13539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 190 - 277
Target Start/End: Complemental strand, 44251399 - 44251313
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctag 277  Q
    |||||||||||  |||||||||| |||||| ||||||||||  |||||||||||||||| ||||||||||| ||| ||| ||||||||    
T  44251399 ggataatgcatt-tttatgcaggggtcggggttcgaatcccggacaccccatttattcatctttaaggtgaatttttctagccgctag 44251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 25104326 - 25104443
Alignment:
Q  168 ttgagtttagctcatttggt-aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttct 266  Q
    ||||| |||||||||| ||| |||||||||||| ||| | ||||||   | |||||||||| ||| | ||| |||||||||| ||||||||||| |||||    
T  25104326 ttgagcttagctcattcggtgaaggataatgcacaatatgtgcagggaccaggattcgaattccagatacctcatttattcatctttaaggtgaatttct 25104425  T
Q  267 ctggccgctagactactt 284  Q
    | |||| |||||||||||    
T  25104426 ccggccactagactactt 25104443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 11491309 - 11491198
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    ||||||||||||  |||| |||||||||||||| |||||| | |||  |||||| |||  |||||||| ||||||| ||||||||||| ||||||| |||    
T  11491309 ttagctcatttgacaagggataatgcataatttgtgcaggggccggagttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagcc 11491210  T
Q  273 gctagactactt 284  Q
     |||| ||||||    
T  11491209 actaggctactt 11491198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 43362263 - 43362165
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttct 266  Q
    |||| |||||||||||| ||||| |||||||| ||| ||| |||| |||||| |||||| |||  |||||||| ||||||| ||||||||||| |||||    
T  43362263 tgagcttagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtgaatttct 43362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 2832166 - 2832057
Alignment:
Q  169 tgagtttagctcatttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||||||||| ||||||||  | ||||| ||| | |||||| |||||| |||||| ||||||||||||| ||||||| ||||||||||| || |||    
T  2832166 tgagcttagctcatctggtaaggggtgatgcacaatatgtgcaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaattcctc 2832067  T
Q  268 tggccgctag 277  Q
    | ||| ||||    
T  2832066 tagccactag 2832057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 35305001 - 35305098
Alignment:
Q  188 aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccc-atttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||||||| | ||||||||  |||| ||||||| |||  || |||| |||||||||| |||||||||| ||||||| |||||||| ||||||    
T  35305001 aaggataatgcatattatatgcagggatcggtattcgaaccccggactccccaatttattcacttttaaggtgattttctctagccgctaggctactt 35305098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 35909124 - 35909031
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgg-gattcgaatcccaaacaccccatttattcacctttaaggtga 260  Q
    |||| ||||||||||| |||||| |||||||| ||| |||||||| ||||| | ||||||||||| |||||||| ||||| | |||||||||||    
T  35909124 tgagcttagctcattttgtaagggataatgcacaatatatgcaggggtcggaggttcgaatcccagacaccccacttatttatctttaaggtga 35909031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 56555585 - 56555662
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactac 282  Q
    |||||||| |||||| |||||| | | ||||||||| ||||||||||||||||||| ||||||| |||| ||| ||||    
T  56555585 tatgcaggggtcggggttcgaacctcgaacaccccacttattcacctttaaggtgaatttctctagccgttaggctac 56555662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 37574273 - 37574388
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||||  | |||||||| | |||| ||| || |||   ||||||| ||||||||||||||||||| ||||||    
T  37574273 tgagcttagctcatttggtaagggataatgcatt-tgtatgcaggggccggggttcaaaccccgggcaccccacttattcacctttaaggtgaatttctc 37574371  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  37574372 tagccactaggctactt 37574388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 46283122 - 46283238
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||||||||||||| |||||||| ||| | |||||  | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  46283122 tgagcttacctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 46283221  T
Q  268 tggccgctagactactt 284  Q
    | | | |||||||||||    
T  46283222 tagtcactagactactt 46283238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 48404232 - 48404116
Alignment:
Q  169 tgagtttagctcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||| |||| ||||||| ||||| | || |||||||||| |||||| |||  ||||| || ||||||| ||||||||||| |||||     
T  48404232 tgagcttagctcatttgataagagataatgtataatatgtgtaggtgtcggggttcgaaccccggacacctcacttattcatctttaaggtgaatttctt 48404133  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  48404132 tagccactaggctactt 48404116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 49607610 - 49607666
Alignment:
Q  228 cccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||| |||||||| ||||||||||||||||||| ||||||| |||| ||||||||||    
T  49607610 cccagacaccccacttattcacctttaaggtgaatttctctagccgatagactactt 49607666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 50815707 - 50815823
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||| ||| |||||||||| ||||| |||||| | |||| |||||| |||  ||||||||  |||||| ||| ||||||| ||||||    
T  50815707 tgagcttagctcatttgataaaggataatgcacaatttgtgcaggggccggggttcgaaccccggacaccccacatattcatcttaaaggtgaatttctc 50815806  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  50815807 tagccactaggctactt 50815823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 51974747 - 51974863
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| ||||||||||||| | |  ||| |||| ||||| | ||||||||||| ||| ||    
T  51974747 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcgggattcgaacctcggacatcccacttatttatctttaaggtgaatttatc 51974846  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  51974847 tagccactaggctactt 51974863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 49607933 - 49607992
Alignment:
Q  225 aatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    ||||||| |||||||| ||||| ||||||||||||| ||||||| ||| |||||||||||    
T  49607933 aatcccagacaccccacttatttacctttaaggtgaatttctctagccactagactactt 49607992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 55308111 - 55308044
Alignment:
Q  188 aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaa 255  Q
    |||||||||||||||||||||||||  || ||||||||| |||| |||||||| |||||  |||||||    
T  55308111 aaggataatgcataatttatgcagggatcaggattcgaaccccagacaccccacttatttgcctttaa 55308044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 2766831 - 2766737
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    ||||||||||| || |||||||| | ||||||||||| ||||  |||| || |  |||||||||||||||| ||||||  |||||||| ||||||    
T  2766831 ggataatgcattatgtatgcaggggccgggattcgaaccccaggcacctcactatttcacctttaaggtgaatttctccagccgctaggctactt 2766737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 285
Target Start/End: Original strand, 21200550 - 21200646
Alignment:
Q  190 ggataatgcataatttat--gcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactta 285  Q
    ||||||||||||||||||  ||||| |||||| ||||||  ||   ||||||| |||||||| |||||||||| ||||||| |||| |||||||||||    
T  21200550 ggataatgcataatttatatgcaggggtcggggttcgaactccggtcaccccacttattcac-tttaaggtgaatttctctagccgttagactactta 21200646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 40407056 - 40406946
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcggga-ttcgaatcccaaacaccccatttattcacctttaaggtgagtttct 266  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | ||||  |||||| |||  |||||||| ||||||| ||||||||||| |||||    
T  40407056 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccgggggttcgaaccccggacaccccacttattcatctttaaggtgaatttct 40406957  T
Q  267 ctggccgctag 277  Q
    || ||| ||||    
T  40406956 ctagccactag 40406946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 8027457 - 8027416
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  8027457 tgagtttagctcagttggtaaggataatgcataatatatgca 8027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 22525409 - 22525501
Alignment:
Q  188 aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagacta 281  Q
    |||||||||||||| | |||||||  | |||| ||||||||||  |||||||| ||||||||||||||| ||| |||||||  ||||| |||||    
T  22525409 aaggataatgcatattatatgcagaagccggg-ttcgaatcccggacaccccacttattcacctttaagatgaatttctctaaccgctggacta 22525501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 29889805 - 29889756
Alignment:
Q  236 ccccatttattcacctttaaggtgagtttctctggccgctagactactta 285  Q
    |||||||||||||| |||||||||| ||||||| |||||||| |||||||    
T  29889805 ccccatttattcacatttaaggtgaatttctctagccgctaggctactta 29889756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 44312845 - 44312776
Alignment:
Q  174 ttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt 243  Q
    |||||||| |||||| ||||| |||||  | |||||||| ||||||||||||| ||||||||| ||||||    
T  44312845 ttagctcagttggtagggatattgcattttatatgcaggggtcgggattcgaaccccaaacactccattt 44312776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 45848012 - 45847923
Alignment:
Q  178 ctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttct 266  Q
    |||||||| ||||| |||||||||||| | ||||||  ||||| |||||| |||  |||||||| ||||||| ||||||||||| |||||    
T  45848012 ctcatttgataagggataatgcataatatgtgcagggatcggggttcgaaccccggacaccccacttattcatctttaaggtgaatttct 45847923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 35122081 - 35122129
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcaccttt 253  Q
    |||| ||| |||| |||||||||||| ||||||||||||||||||||||    
T  35122081 tatgtaggggtcgagattcgaatcccgaacaccccatttattcaccttt 35122129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 2609454 - 2609403
Alignment:
Q  174 ttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcga 225  Q
    |||||||| |||||| ||||| |||||||||||| ||||||||||| |||||    
T  2609454 ttagctcagttggtagggatattgcataatttatacaggtgtcggggttcga 2609403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 24570223 - 24570326
Alignment:
Q  182 tttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagact 280  Q
    |||||||||| |||||||| ||| |||| ||| || ||| |||||| ||| ||||||| | ||||||| ||||||||||| |||||  |||| || ||||    
T  24570223 tttggtaagggataatgcacaatatatgtaggggttggggttcgaaccccgaacaccctacttattcaactttaaggtgaatttcttcggccactggact 24570322  T
Q  281 actt 284  Q
    ||||    
T  24570323 actt 24570326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 25234900 - 25234837
Alignment:
Q  221 ttcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||| |||| |||||||| ||||||| ||||||||||| |||||||  || |||||||||||    
T  25234900 ttcgaaccccagacaccccagttattcatctttaaggtgaatttctctaaccactagactactt 25234837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 281
Target Start/End: Original strand, 32037589 - 32037680
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagacta 281  Q
    |||||||||||| | |||||||| |||||| ||| |||||   | | ||||||||||||| ||||| |||| ||||||| ||||||| ||||    
T  32037589 ggataatgcatattatatgcaggggtcggggttcaaatcctggatatcccatttattcacatttaaagtgaatttctctagccgctaaacta 32037680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 260
Target Start/End: Complemental strand, 37032260 - 37032181
Alignment:
Q  183 ttggtaaggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||| ||||| ||||||| ||| |||||||| ||||||||||||| |||  |||||||| ||||||||||| ||||||||    
T  37032260 ttggcaaggacaatgcattattatatgcaggggtcgggattcgaaccccggacaccccacttattcaccttataaggtga 37032181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 44315571 - 44315512
Alignment:
Q  194 aatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcaccttt 253  Q
    |||||||| | |||||||| | |||||||| || ||| ||||||||||||||||||||||    
T  44315571 aatgcatattatatgcaggagccgggattcaaaccccgaacaccccatttattcaccttt 44315512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 2629588 - 2629654
Alignment:
Q  174 ttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    |||||||| |||| | ||| | ||||||||||||||||| |||||| |||||| ||| |||||||||    
T  2629588 ttagctcaattggcagggacattgcataatttatgcaggggtcggggttcgaaccccgaacacccca 2629654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 9259549 - 9259491
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaat 227  Q
    ||||||||||||| ||| |||||| |||||||||||||| |||  || |||||||||||    
T  9259549 tgagtttagctcagttgataaggacaatgcataatttattcagaagttgggattcgaat 9259491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 22341947 - 22341841
Alignment:
Q  179 tcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctag 277  Q
    |||||||||||  ||||||||| ||| | || ||| || ||| ||| |||||||||||||||| || |||| ||| ||||||| |||||||  |||||||    
T  22341947 tcatttggtaaaagataatgcacaatatgtgtaggggttggggttcaaatcccaaacaccccacttgttcatcttaaaggtgaatttctctaaccgctag 22341848  T
Q  278 actactt 284  Q
     ||||||    
T  22341847 gctactt 22341841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 36993041 - 36993155
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||| ||||| |||||||| ||| | || ||| || ||| || ||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  36993041 tgagcttagctcatttgataagggataatgcacaatatgtgaaggggttggggtttgaaccccggacaccccaattattcatctttaaggtgaatttctc 36993140  T
Q  268 tggccgctagactac 282  Q
    | ||| |||| ||||    
T  36993141 tagccactaggctac 36993155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 12058320 - 12058361
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| | ||||||||||||||||||| ||||||    
T  12058320 tgagtttagctcagtcggtaaggataatgcataatatatgca 12058361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 14577567 - 14577526
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  14577567 tgagtttagctcagttggtaaggacaatgcataatatatgca 14577526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 29406361 - 29406418
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaa 226  Q
    |||| |||||||| |||||| ||| | ||||||||||||||||| |||||| ||||||    
T  29406361 tgagcttagctcaattggtagggacattgcataatttatgcaggggtcggggttcgaa 29406418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 34247441 - 34247482
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  34247441 tgagtttagctcagttggtaaggacaatgcataatatatgca 34247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 38416058 - 38416099
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    |||| |||||||| ||||||||||||||||||||| ||||||    
T  38416058 tgagcttagctcagttggtaaggataatgcataatatatgca 38416099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 49811436 - 49811387
Alignment:
Q  235 accccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||| ||||||||||||||| ||| ||||||| |||||||| ||||||    
T  49811436 accccacttattcacctttaagatgaatttctctagccgctaggctactt 49811387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 55924847 - 55924786
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatccc 230  Q
    |||| |||||||| |||||||||| ||| |||||| |||||| || || |||||||||||||    
T  55924847 tgagcttagctcaattggtaaggacaatacataatatatgcaagtttcaggattcgaatccc 55924786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 285
Target Start/End: Original strand, 2931133 - 2931181
Alignment:
Q  237 cccatttattcacctttaaggtgagtttctctggccgctagactactta 285  Q
    |||| ||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  2931133 cccacttattcatctttaaggtgaatttctctagccactagactactta 2931181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 3784916 - 3784983
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacc 237  Q
    |||| |||||||| |||||| ||||| ||||||||||||||||| ||| || |||||| ||| ||||||    
T  3784916 tgagcttagctcaattggtagggatattgcataatttatgcagg-gtcagggttcgaaccccgaacacc 3784983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 9759417 - 9759469
Alignment:
Q  214 gtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttct 266  Q
    |||||| ||||||||||| |||||||| |||||| |||| ||||||| |||||    
T  9759417 gtcggggttcgaatcccagacaccccacttattctccttcaaggtgaatttct 9759469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 43084447 - 43084547
Alignment:
Q  169 tgagtttagctcatttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| ||||||||||||||| ||||||| ||| |||  ||| |||||| |||||||||     |||||| ||||||| ||||||||||| ||||||    
T  43084447 tgagcttaactcatttggtaaggaataatgcacaatatatataggggtcggggttcgaatcctggttaccccacttattcatctttaaggtgaatttctc 43084546  T
Q  268 t 268  Q
    |    
T  43084547 t 43084547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 50442807 - 50442740
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacc 237  Q
    |||| |||||||| |||||| |||||||||||||| |||||| | ||| || ||||||||||| |||||    
T  50442807 tgagcttagctcagttggtagggataatgcataatatatgcaag-gtctgggttcgaatcccagacacc 50442740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 43027155 - 43027271
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||| ||||| |||||||| ||||| ||| ||||  | | |||||| |||| |||||||||||||||||||||||||||| ||||||    
T  43027155 tgagcttagctcatttgataagggataatgcacaatttgtgcgggtgctgaggttcgaaccccagacaccccatttattcacctttaaggtgaatttctc 43027254  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||||||||||    
T  43027255 tagccactagactactt 43027271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 31594457 - 31594380
Alignment:
Q  173 tttagctcatttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcac 249  Q
    |||| ||||||||||||||| ||||||||||| |||| ||| ||||   |||||||||||||||||||||||||||||    
T  31594457 tttaactcatttggtaaggaataatgcataatatatgtaggggtcgaagttcgaatcccaaacaccccatttattcac 31594380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 37592264 - 37592201
Alignment:
Q  221 ttcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||| |||| |||||||| ||||| ||||||||||||| ||||||| |||||||||||||||    
T  37592264 ttcgaaccccagacaccccacttatttacctttaaggtgaatttctctagccgctagactactt 37592201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 42541165 - 42541271
Alignment:
Q  178 ctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgcta 276  Q
    |||| ||||||||| |||||| ||| |||||||||| |  ||| |||||| |||| |||||||| ||| ||||||||||||||| ||||||| |||||||    
T  42541165 ctcacttggtaagggataatggata-tttatgcaggggctggggttcgaaccccagacaccccacttactcacctttaaggtgaatttctctagccgcta 42541263  T
Q  277 gactactt 284  Q
    | ||||||    
T  42541264 ggctactt 42541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 24202150 - 24202259
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||||||||| ||||||||| || |||||||| | |||| |||||| |||  |||||||| |  |||||||||||||||| ||||||    
T  24202150 tgagcttagctcacttggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtgaatttctc 24202249  T
Q  268 tggccgctag 277  Q
      ||||||||    
T  24202250 cagccgctag 24202259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 17269912 - 17270028
Alignment:
Q  169 tgagtttagctcatttggta-aggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||||||||||||||| || |||||||| |||||||| ||| |||||||||||||  |  ||||||| | ||||||| | | ||||||| ||||||    
T  17269912 tgagcttagctcatttggtagagaataatgcacaatttatgtaggggtcgggattcgaacgctgaacacccaacttattcatcataaaggtgaatttctc 17270011  T
Q  268 tggccgctagactactt 284  Q
    | ||| ||| |||||||    
T  17270012 tagccactatactactt 17270028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 27463621 - 27463522
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| |||||||| | ||||||||||| |||| | | |||| ||||||| |||||| |||| ||||||    
T  27463621 tgagcttagctcatttggtaaggaataatgcacaatatatgcaggagccgggattcgaa-cccagataacccacttattcatctttaaagtgaatttctc 27463523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 33065352 - 33065236
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||||||||||||| |||| |||||||| ||| | || ||| |||||| ||||||  || ||||||| | ||||||| ||||||||||| ||||||    
T  33065352 tgagcttagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggttcgaactccgaacaccctacttattcatctttaaggtgaatttctc 33065253  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  33065252 tagccactaggctactt 33065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 34107495 - 34107610
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| ||| || ||| || |||  |||||||| ||||||| ||||||||||| ||||||    
T  34107495 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcagggttcaaa-cccggacaccccacttattcatctttaaggtgaatttctc 34107593  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  34107594 tagccactaggctactt 34107610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 5207130 - 5207208
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||| ||||| ||||||| |||| |||||||| ||||||||||||||| ||| ||||| | ||| |||||||||||    
T  5207130 tatgcaggggtcgg-attcgaaccccagacaccccacttattcacctttaagatgaatttctttagccactagactactt 5207208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 12183821 - 12183714
Alignment:
Q  178 ctcatttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgcta 276  Q
    |||| |||||||||| |||||||| || |||||||| |||||||||||||  ||| ||| |||| |  || ||||||||||||| |||||| |  |||||    
T  12183821 ctcacttggtaaggaataatgcattatgtatgcaggggtcgggattcgaactccagacatcccactattttacctttaaggtgaatttctccgatcgcta 12183722  T
Q  277 gactactt 284  Q
    ||||||||    
T  12183721 gactactt 12183714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 41541570 - 41541519
Alignment:
Q  233 acaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||| |||||||| |||||||||| |||||||||||||||| ||||||    
T  41541570 acaccccacttattcacttttaaggtgaatttctctggccgctaggctactt 41541519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 43684279 - 43684377
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||||  | |||||||| |  | | |||||| ||| ||||||||| ||||||||||||||||||| ||||||    
T  43684279 tgagcttagctcatttggtaagggataatgcatt-tgtatgcaggggctgaggttcgaaccccgaacaccccacttattcacctttaaggtgaatttctc 43684377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 23919543 - 23919469
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt 243  Q
    |||| |||||||| |||||| ||| | |||||||| |||| ||| |||||| ||||||||||| |||||||||||    
T  23919543 tgagcttagctcagttggtagggacattgcataatatatggaggggtcggggttcgaatcccagacaccccattt 23919469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 285
Target Start/End: Complemental strand, 18424244 - 18424130
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    |||| |||||||||||||||||||  ||||| ||| | |||||| | |||| ||||||  ||  ||| |||| ||||||| ||||||||||| |||||||    
T  18424244 tgagcttagctcatttggtaagga--atgcacaatatgtgcaggggccggggttcgaactccggacatcccacttattcatctttaaggtgaatttctct 18424147  T
Q  269 ggccgctagactactta 285  Q
     ||| |||| |||||||    
T  18424146 agccactaggctactta 18424130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 23405200 - 23405283
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    |||| |||||||| |||||| ||| | |||||||| |||||||| |||||| |||||| ||   |||||||| |||||||||||    
T  23405200 tgagcttagctcagttggtagggacattgcataatatatgcaggggtcggggttcgaaccctggacaccccacttattcacctt 23405283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 37886255 - 37886204
Alignment:
Q  233 acaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||| ||||||||||||||||||| |||||||  ||| ||||||||||    
T  37886255 acaccccacttattcacctttaaggtgaatttctctaaccgttagactactt 37886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 7379666 - 7379592
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt 243  Q
    |||| ||| |||| |||||||||||| |||||| | |||||||  |||||| ||||||| || ||||||||||||    
T  7379666 tgagcttaactcagttggtaaggatattgcatattatatgcagaggtcggggttcgaattccgaacaccccattt 7379592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 12124546 - 12124587
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  12124546 tgagtttagctcagttggtaaggacaatgcataatatatgca 12124587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 18278483 - 18278422
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatccc 230  Q
    ||||||||||||| |||||| ||||| |||||| | |||||||| | |||| ||||||||||    
T  18278483 tgagtttagctcagttggtagggatattgcatattatatgcaggagccggggttcgaatccc 18278422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 21482579 - 21482538
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  21482579 tgagtttagctcagttggtaaggataatgtataatatatgca 21482538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 28771583 - 28771624
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  28771583 tgagtttagctcagttggtaaggacaatgcataatatatgca 28771624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 30978363 - 30978404
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||| |||||||||||||| ||||||    
T  30978363 tgagtttagctcaattggtatggataatgcataatatatgca 30978404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 35685121 - 35685080
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  35685121 tgagtttagctcagttggtaaggacaatgcataatatatgca 35685080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 43117250 - 43117209
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  43117250 tgagtttagctcagttggtaaggacaatgcataatatatgca 43117209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 260
Target Start/End: Original strand, 1962846 - 1962918
Alignment:
Q  188 aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtga 260  Q
    |||||||||||||| | |||||||| |||| | ||||||  ||  |||||||| ||||||| |||||||||||    
T  1962846 aaggataatgcatattgtatgcaggggtcgaggttcgaactccggacaccccacttattcatctttaaggtga 1962918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 4936606 - 4936574
Alignment:
Q  178 ctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||| |||||||||||||||||||||    
T  4936606 ctcatttggtagggataatgcataatttatgca 4936574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 5021695 - 5021663
Alignment:
Q  178 ctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||| |||||||||||||||||||||    
T  5021695 ctcatttggtagggataatgcataatttatgca 5021663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 7086290 - 7086346
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||||||| | ||||||||||| ||| ||||||||| ||||||||||| ||||||||    
T  7086290 tatgcaggggccgggattcgaaccccgaacaccccaattattcaccttataaggtga 7086346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 10262759 - 10262823
Alignment:
Q  189 aggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    |||| ||||||| ||| |||||||| |||||| |||||| |||| |||||||| |||||||||||    
T  10262759 aggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattcacctt 10262823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 15764934 - 15765002
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacc 237  Q
    |||| |||||||| |||||| ||||| |||||| | |||||||| || ||| ||||||||||| |||||    
T  15764934 tgagcttagctcagttggtagggatattgcatattatatgcaggggttggggttcgaatcccagacacc 15765002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 18949779 - 18949664
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||||||| ||| ||||||||||| || | |||||| |||||| |||||| ||  ||||||| | |||||||  ||||| |||| ||||||    
T  18949779 tgagcttaactcatttgataacggataatgcattatatgtgcaggggtcggggttcgaaccctgaacacccaacttattca-ttttaatgtgaatttctc 18949681  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||||||||||    
T  18949680 tagccactagactactt 18949664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 20375593 - 20375693
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||||||||| ||| ||| || ||||||||||   |||| |||||| | || |||| ||| ||||||| ||||||||||| ||||||    
T  20375593 tgagcttagctcacttggtaagggatattgcctattttatgcagggtccggggttcgaacctcagacacgccacttattcatctttaaggtgaatttctc 20375692  T
Q  268 t 268  Q
    |    
T  20375693 t 20375693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 33816480 - 33816408
Alignment:
Q  171 agtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt 243  Q
    |||||| |||| ||||||  |||| |||||| | |||||||| |||||| |||||| ||| ||||||||||||    
T  33816480 agtttacctcagttggtagagatattgcatattatatgcaggggtcgggtttcgaaccccgaacaccccattt 33816408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 19733159 - 19733064
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    |||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||| ||||||  | ||||||| ||||||||||| |||||||    
T  19733159 ttagctcatttggtaagggataatgcataatatatgcaggggtcggggttcgaatcccgaacacctaaattattcatctttaaggtgaatttctct 19733064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 14148386 - 14148335
Alignment:
Q  27 ttttatctaattgtcttctaaataagatcatgaagtcacaagtattaattat 78  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14148386 ttttatctaattgtcttctaagtaagatcatgaagtcacaagtattaattat 14148335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 268
Target Start/End: Complemental strand, 38289325 - 38289230
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    |||||||||||||||||| |||||||| ||| | |||||| |||||| |||||| | ||||||||||| ||||||| ||||||||||| |||||||    
T  38289325 ttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaacctcaaacaccccacttattcatctttaaggtgaatttctct 38289230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 43413959 - 43413865
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||| ||||| |||||| |  ||| |||||||||||||||||||| ||||||| ||||||||||| ||||||| ||| |||| ||||||    
T  43413959 ggataatgcacaatttgtgcaggggctggggttcgaatcccaaacaccccacttattcatctttaaggtgaatttctctagccactaggctactt 43413865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 19957411 - 19957300
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    |||||||| ||||||||| |||||||||| | |||||||| | || | |||||| |||  |||||||| ||||||||||||||||||| ||||||| ||     
T  19957411 ttagctcacttggtaagggataatgcatattatatgcaggggacgaggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagca 19957312  T
Q  273 gctagactactt 284  Q
    ||||| ||||||    
T  19957311 gctaggctactt 19957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 266
Target Start/End: Complemental strand, 41845524 - 41845426
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttct 266  Q
    |||| |||||||||||||||||| |||||||| ||| | ||||||  ||||| |||||| ||| ||||||| ||||||||| ||||||||||| |||||    
T  41845524 tgagcttagctcatttggtaagggataatgcacaatatgtgcagggatcggggttcgaaccccgaacaccctatttattcatctttaaggtgaatttct 41845426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 273
Target Start/End: Original strand, 10201262 - 10201367
Alignment:
Q  169 tgagtttagctcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    ||||||||| | | |||||||| ||||||||||||| |||| ||| |||||| |||||| |||  ||||| ||||||||||||||||| |||| ||||||    
T  10201262 tgagtttagtttagttggtaagagataatgcataatatatgtaggggtcggggttcgaaccccggacacctcatttattcacctttaaagtgaatttctc 10201361  T
Q  268 tggccg 273  Q
    | ||||    
T  10201362 tagccg 10201367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 1032570 - 1032670
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| |  ||| |||||| |||| |||||||| ||||||| ||||||||||| ||||||    
T  1032570 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatttctc 1032669  T
Q  268 t 268  Q
    |    
T  1032670 t 1032670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 33820490 - 33820390
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||||||||||||||| || ||||| || ||||| |||||  |||||| ||||||||||| |||||||| ||||||| ||| ||||||| ||||||    
T  33820490 tgagcttagctcatttggtatgggataatacacaatttgtgcagaggtcggggttcgaatcccagacaccccaattattcatcttaaaggtgaatttctc 33820391  T
Q  268 t 268  Q
    |    
T  33820390 t 33820390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 43456742 - 43456632
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    |||||||||||||||||| |||||||| ||| |||| | | |||||| |||||| |||  |||||||| |||||||  |||||||||| |||||||| ||    
T  43456742 ttagctcatttggtaagggataatgcacaatatatgtaagggtcggggttcgaaccccggacaccccacttattcat-tttaaggtgattttctctgtcc 43456644  T
Q  273 gctagactactt 284  Q
     |||||||||||    
T  43456643 actagactactt 43456632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 27558958 - 27558882
Alignment:
Q  175 tagctcatttggtaaggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    |||||||||||||| ||||||||||| ||| |||||||| ||||||||||||| |||| |||||||| |||||||||||    
T  27558958 tagctcatttggta-ggataatgcattattatatgcaggggtcgggattcgaa-cccagacaccccacttattcacctt 27558882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 36104017 - 36103927
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggt 258  Q
    |||| ||| |||||||||||| |||||||||| ||| | |||||| | |||| |||||| ||||||||||||| ||||||| |||||||||    
T  36104017 tgagcttaactcatttggtaaaggataatgcacaatatgtgcaggggccggggttcgaaccccaaacaccccacttattcatctttaaggt 36103927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 39104607 - 39104722
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    ||||||||||||||||||||||| |||||||| ||| | |||||  | |||| |||||| |||  |||||| | ||||||| ||||||||||  ||||||    
T  39104607 tgagtttagctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccc-acttattcatctttaaggtggatttctc 39104705  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||||||||||    
T  39104706 tagccactagactactt 39104722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 41454922 - 41454822
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||| |||||||||| ||| | |||||| | |||| |||||| |||  |||||||| ||||||| |||||| |||| ||||||    
T  41454922 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaatgtgaatttctc 41454823  T
Q  268 t 268  Q
    |    
T  41454822 t 41454822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 285
Target Start/End: Complemental strand, 280084 - 279975
Alignment:
Q  176 agctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgc 274  Q
    |||||||||||||||| |||||| | ||| | |||||| || ||| |||||| |||  |||||| |||||||||  |||||||||| ||||||| | |||    
T  280084 agctcatttggtaagggataatgtacaatatgtgcaggggtaggg-ttcgaaccccggacacccaatttattcatttttaaggtgaatttctctagtcgc 279986  T
Q  275 tagactactta 285  Q
    |||||||||||    
T  279985 tagactactta 279975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 635768 - 635877
Alignment:
Q  176 agctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgc 274  Q
    |||||||||||||||| |||||| | ||| | |||||| || ||| |||||| |||  |||||| |||||||||  |||||||||| ||||||| | |||    
T  635768 agctcatttggtaagggataatgtacaatatgtgcaggggtaggg-ttcgaaccccggacacccaatttattcatttttaaggtgaatttctctagtcgc 635866  T
Q  275 tagactactta 285  Q
    |||||||||||    
T  635867 tagactactta 635877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 821571 - 821680
Alignment:
Q  176 agctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgc 274  Q
    |||||||||||||||| |||||| | ||| | |||||| || ||| |||||| |||  |||||| |||||||||  |||||||||| ||||||| | |||    
T  821571 agctcatttggtaagggataatgtacaatatgtgcaggggtaggg-ttcgaaccccggacacccaatttattcatttttaaggtgaatttctctagtcgc 821669  T
Q  275 tagactactta 285  Q
    |||||||||||    
T  821670 tagactactta 821680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 4259859 - 4259975
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||||||||||||| |||||||| ||| | |||||| | |||| ||| || |||  || ||||| ||||||| ||||||||||| ||||||    
T  4259859 tgagcttaactcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccccggactccccacttattcatctttaaggtgaatttctc 4259958  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  4259959 tagccactaggctactt 4259975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 10621470 - 10621354
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||| ||||| ||||||||| || |||||||| ||| || || ||| |||  ||||||||||| ||||||||||| |||| |||||     
T  10621470 tgagcttagctcacttgataagggataatgcattatgtatgcaggggtcagggtttgaaccccggacaccccattttttcacctttaatgtgaatttctt 10621371  T
Q  268 tggccgctagactactt 284  Q
      |||||||| ||||||    
T  10621370 ccgccgctaggctactt 10621354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 22652683 - 22652783
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||| ||||| |||||||||||||| |||||| | |||  |||||| |||  |||||||| |||||||  || ||||||| ||||||    
T  22652683 tgagcttagctcatttgataagggataatgcataatttgtgcaggggccggtgttcgaaccccggacaccccaattattcatgttaaaggtgaatttctc 22652782  T
Q  268 t 268  Q
    |    
T  22652783 t 22652783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 27822090 - 27822154
Alignment:
Q  189 aggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    |||||||||||| ||| |||||||| ||| ||||| ||| ||||||||||||| |||||||||||    
T  27822090 aggataatgcattattatatgcaggggtccggatttgaaccccaaacaccccacttattcacctt 27822154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 8349573 - 8349462
Alignment:
Q  174 ttagctcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    ||||||||||||||||| |||||| || ||| |||||||| | |||  ||||||  || ||||||||| ||||||| ||||||| ||| ||| |||  ||    
T  8349573 ttagctcatttggtaagtgataatacagaatatatgcaggggccggagttcgaactccgaacaccccacttattcatctttaagatgaatttatctaacc 8349474  T
Q  273 gctagactactt 284  Q
     |||||||||||    
T  8349473 actagactactt 8349462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 20872524 - 20872453
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    |||| |||||||| ||| || ||| | ||||||||||||||||| |||||  |||||||||| |||||||||    
T  20872524 tgagcttagctcagttgatagggacattgcataatttatgcaggggtcggagttcgaatcccgaacacccca 20872453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 39172255 - 39172192
Alignment:
Q  221 ttcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    ||||||||||  ||||||||||||||||||||||| |||| ||||| | ||| |||| ||||||    
T  39172255 ttcgaatcccggacaccccatttattcacctttaaagtgaatttctttagcccctaggctactt 39172192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 2294165 - 2294091
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt 243  Q
    ||||||||||||| ||| || ||||| | |||| | |||||||| |||||| |||||| |||| |||||||||||    
T  2294165 tgagtttagctcaattgatagggatattacatattatatgcaggggtcggggttcgaaccccagacaccccattt 2294091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 268
Target Start/End: Complemental strand, 5904467 - 5904369
Alignment:
Q  171 agtttagctcatttggt-aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    ||||||||||||||||| || ||||||||| ||| | |||||| | |||| |||||| |||  ||| |||| ||||||| ||||||| ||| |||||||    
T  5904467 agtttagctcatttggtaaaagataatgcacaatatgtgcaggggacggggttcgaaccccggacatcccacttattcatctttaagatgaatttctct 5904369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 255
Target Start/End: Original strand, 37523976 - 37524026
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaa 255  Q
    |||||||||| |||| |||||| |||||||||  |||||||||||||||||    
T  37523976 tatgcaggtgccggggttcgaaccccaaacacatcatttattcacctttaa 37524026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 44828528 - 44828411
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtc-gggattcgaatcccaaacaccccatttattca-cctttaaggtgagtttc 265  Q
    |||| |||||||||||||||| |||||||||| ||||| |||||| ||| ||| |||||| |||| ||||| || ||||||| | |||||||||| ||||    
T  44828528 tgagcttagctcatttggtaagggataatgcacaatttgtgcagg-gtctggggttcgaaccccagacaccacacttattcatcttttaaggtgaatttc 44828430  T
Q  266 tctggccgctagactactt 284  Q
    | | |||  ||||||||||    
T  44828429 tttagccattagactactt 44828411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 4798635 - 4798543
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    ||||| ||||||| |||||| ||||||||||| ||| |||||||| | |||| |||||| |||  |||||||| ||||||||||| ||||||||    
T  4798635 tgagtatagctcagttggta-ggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcaccttgtaaggtga 4798543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 10199817 - 10199744
Alignment:
Q  189 aggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||| ||||||| ||| |||||||| | |||| |||||| ||||||||||||| ||||||||||| ||||||||    
T  10199817 aggacaatgcattattatatgcaggggccggggttcgaaccccaaacaccccacttattcaccttataaggtga 10199744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 266
Target Start/End: Complemental strand, 11690984 - 11690951
Alignment:
Q  233 acaccccatttattcacctttaaggtgagtttct 266  Q
    |||||||||||||||||||||||||||| |||||    
T  11690984 acaccccatttattcacctttaaggtgaatttct 11690951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 23816791 - 23816832
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    |||| |||||||| ||||||||||||||||||||| ||||||    
T  23816791 tgagcttagctcagttggtaaggataatgcataatatatgca 23816832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 37938496 - 37938537
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||| |||||||||||||| ||||||    
T  37938496 tgagtttagctcagttggtatggataatgcataatatatgca 37938537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 38210844 - 38210768
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttatt 246  Q
    ||||||||||||| | |||||||||| |||||||| |||||||| |||||  || ||| |||| ||| ||||||||||    
T  38210844 tgagtttagctcaat-ggtaaggatattgcataatatatgcaggggtcggagtttgaaccccagacatcccatttatt 38210768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 40393327 - 40393392
Alignment:
Q  174 ttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccc 239  Q
    |||||||| |||| | | ||| ||||||||||||||||| |||||| |||||| ||| ||||||||    
T  40393327 ttagctcaattggcaggaatattgcataatttatgcaggggtcggggttcgaaccccgaacacccc 40393392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 3956767 - 3956727
Alignment:
Q  241 tttattcacctttaaggtgagtttctctggccgctagacta 281  Q
    |||||||||||||||||||| ||||||| ||| ||||||||    
T  3956767 tttattcacctttaaggtgaatttctctagccactagacta 3956727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 13537369 - 13537313
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    ||||||||||||||| |||||| |||| |||||||| ||||||| ||| ||||||||    
T  13537369 tatgcaggtgtcggggttcgaaccccagacaccccacttattcatcttataaggtga 13537313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 13626917 - 13626861
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    ||||||||||||||| |||||| |||| |||||||| ||||||| ||| ||||||||    
T  13626917 tatgcaggtgtcggggttcgaaccccagacaccccacttattcatcttataaggtga 13626861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 25824961 - 25824897
Alignment:
Q  176 agctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    |||||| |||||| ||| | ||||||||||||||| | |||||| |||||| |||| ||||||||    
T  25824961 agctcaattggtagggacattgcataatttatgcaagggtcggggttcgaaccccagacacccca 25824897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 284
Target Start/End: Complemental strand, 27102403 - 27102311
Alignment:
Q  192 ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||||| | |||| |||  ||| |||||  ||||||||||||| || ||||  || ||||||| ||||||| ||| |||||||||||    
T  27102403 ataatgcataatatgtgcatgtgatggggttcgatccccaaacaccccactttttcatgttaaaggtgaatttctctagccactagactactt 27102311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 15025156 - 15025272
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||||||||||||| |||||||||| ||||| |||| | |||| ||| || ||| ||||||||| ||||||||||||||||||| ||||||    
T  15025156 tgagcttaactcatttggtaagggataatgcatattttatacaggggccggggttcaaaccccgaacaccccacttattcacctttaaggtgaatttctc 15025255  T
Q  268 tggccgctagactactt 284  Q
    |  ||||||| ||||||    
T  15025256 tacccgctaggctactt 15025272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 24029985 - 24030100
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    ||||||||||||||||| ||||| |||||||| ||| | || ||| | |||| |||||| |||| |||||||||||||||| ||||||||||| ||||||    
T  24029985 tgagtttagctcatttgataagggataatgcacaatatgtgtaggggccggggttcgaaccccagacaccccatttattcatctttaaggtgaatttctc 24030084  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||||||||||    
T  24030085 tagcc-ctagactactt 24030100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 284
Target Start/End: Original strand, 5228091 - 5228186
Alignment:
Q  188 aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||||||  |||||||||| | |||| |||||||||   |||||||| ||||||||||||||||||| ||||||| |||||||| ||||||    
T  5228091 aaggataatgcatt-tttatgcaggggccggggttcgaatcctggacaccccacttattcacctttaaggtgaatttctctagccgctaggctactt 5228186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 9668909 - 9668795
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| ||||||||| |||||||||| ||||||||||     || |||||| |||||||||| |||||||||||||| ||||||| ||||||    
T  9668909 tgagcttagctcacttggtaagggataatgcata-tttatgcagggactagggttcgaaccccaaacacctcatttattcacctt-aaggtgaatttctc 9668812  T
Q  268 tggccgctagactactt 284  Q
    |||||||||| ||||||    
T  9668811 tggccgctaggctactt 9668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 174 - 268
Target Start/End: Original strand, 12166087 - 12166182
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    |||||||||||||||||| |||||||| ||||| |||||| |  ||| |||||| |||| |||||||| ||||||| ||||||||||| |||||||    
T  12166087 ttagctcatttggtaagggataatgcacaatttgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaatttctct 12166182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 35308015 - 35307928
Alignment:
Q  183 ttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca-tttattcacctttaaggtgagtttctct 268  Q
    |||||||||| ||||||||||| ||||||||  |||||||||||||  | ||||||||| |||||||||||||||||||| |||||||    
T  35308015 ttggtaaggaataatgcataatatatgcaggactcgggattcgaatttcgaacaccccactttattcacctttaaggtgaatttctct 35307928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 36977315 - 36977228
Alignment:
Q  189 aggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgcta 276  Q
    |||||||||||||||||||| ||  |||||  |||||| | |  |||||| ||||||||||||||||||||||||||||| |||||||    
T  36977315 aggataatgcataatttatgtagaggtcggtgttcgaacctcggacaccctatttattcacctttaaggtgagtttctctagccgcta 36977228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 181 - 281
Target Start/End: Original strand, 43440701 - 43440802
Alignment:
Q  181 atttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagac 279  Q
    ||||||||||| |||||||| ||| | |||||  |||||| ||||||| ||| |||||||| ||||||| ||||||||||| ||||||| ||| ||||||    
T  43440701 atttggtaagggataatgcacaatatgtgcagaggtcggggttcgaattccagacaccccacttattcatctttaaggtgaatttctctagccactagac 43440800  T
Q  280 ta 281  Q
    ||    
T  43440801 ta 43440802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 285
Target Start/End: Original strand, 46243291 - 46243408
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||||| | |||  |||  ||||  ||||||  || ||||||||| ||||||||||||||||||| ||||||    
T  46243291 tgagcttagctcatttggtaagggataatgcatattatatatagggatcggagttcgaactccgaacaccccacttattcacctttaaggtgaatttctc 46243390  T
Q  268 tggccgctagactactta 285  Q
    |  |||||||| ||||||    
T  46243391 taaccgctagaatactta 46243408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 14707293 - 14707408
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||||  | |||||||| || ||| |||||| |||  |||||||| |||||||||||||  |||| ||||||    
T  14707293 tgagcttagctcatttggtaagggataatgcatt-tatatgcaggggttggggttcgaaccccggacaccccacttattcacctttatagtgaatttctc 14707391  T
Q  268 tggccgctagactactt 284  Q
    | |||| ||||||||||    
T  14707392 tagccgttagactactt 14707408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 40273821 - 40273921
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  40273821 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 40273920  T
Q  268 t 268  Q
    |    
T  40273921 t 40273921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 48433805 - 48433689
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| ||| || |||  |||||||| ||||||| ||||||||||| ||||||    
T  48433805 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcaaaccccggacaccccacttattcatctttaaggtgaatttctc 48433706  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  48433705 tagccactaggctactt 48433689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 25775708 - 25775608
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    ||||||||||||| ||||||| |||||||| ||||| |||||| |   || | ||||||  |||||||||||| ||||||| ||||||||||| ||||||    
T  25775708 tgagtttagctcacttggtaaaggataatgtataatatatgcaagaaccgaggttcgaactccaaacaccccacttattcatctttaaggtgaatttctc 25775609  T
Q  268 t 268  Q
    |    
T  25775608 t 25775608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 33248897 - 33248781
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| || ||||| ||| |||||||  |||||| |||||| |||  |||||| | ||||||| ||||||||||| |||||     
T  33248897 tgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaatttctt 33248798  T
Q  268 tggccgctagactactt 284  Q
    | | | |||||||||||    
T  33248797 tcgtcactagactactt 33248781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 44986594 - 44986686
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtga 260  Q
    |||| |||||||||||||||||| |||||||| ||||  |||||  | ||||||||||| ||||||||||||| |||| || ||| |||||||    
T  44986594 tgagcttagctcatttggtaagggataatgcacaattagtgcagtggccgggattcgaaccccaaacaccccacttatccatcttaaaggtga 44986686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 284
Target Start/End: Complemental strand, 4956174 - 4956071
Alignment:
Q  182 tttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagact 280  Q
    |||||||||| |||||||| ||| | |||||| |||||| |||||| ||   |||||||| ||||||| ||||||||||| ||||||| ||| |||| ||    
T  4956174 tttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccctggacaccccacttattcatctttaaggtgaatttctctagccactaggct 4956075  T
Q  281 actt 284  Q
    ||||    
T  4956074 actt 4956071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 284
Target Start/End: Complemental strand, 10624854 - 10624777
Alignment:
Q  206 atgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    ||||||| ||| || |||||| |||||||||| || |||||||| |||||||||| ||||||| |||||| ||||||||    
T  10624854 atgcaggggtcagggttcgaaccccaaacaccgcacttattcac-tttaaggtgaatttctctagccgcttgactactt 10624777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 23602274 - 23602390
Alignment:
Q  169 tgagtttagctcatttggtaagga-taatgcataatttatgcaggtgtcggga-ttcgaatcccaaacaccccatttattcacctttaaggtgagtttct 266  Q
    |||| |||||||||||| |||||| ||||||||| | ||||||| || | ||| |||||| |||  ||||| || ||||||||||||||||||| |||||    
T  23602274 tgagcttagctcatttgataaggaataatgcatattatatgcag-tgaccggagttcgaaccccggacacctcacttattcacctttaaggtgaatttct 23602372  T
Q  267 ctggccgctagactactt 284  Q
     | ||| |||||||||||    
T  23602373 ttagccactagactactt 23602390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 27454011 - 27454128
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtgagtttct 266  Q
    |||| |||||||||||||||| |||||||||| ||||| |||||| |||| | |||||| | |  |||||||| ||||||| |||  ||||||| |||||    
T  27454011 tgagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgaggttcgaacctcggacaccccacttattcatcttaaaaggtgaatttct 27454110  T
Q  267 ctggccgctagactactt 284  Q
    || ||| |||| ||||||    
T  27454111 ctagccactaggctactt 27454128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 285
Target Start/End: Original strand, 37665744 - 37665861
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||||||||||| ||||||  |||| | |||||||| | |||| ||| || |||  |||||||| |||||| |||||||||||| |||||     
T  37665744 tgagcttaactcatttggtaaaggataaaacatattatatgcaggggccggggttcaaaccccggacaccccacttattcgcctttaaggtgaatttctt 37665843  T
Q  268 tggccgctagactactta 285  Q
    | ||| ||||||||||||    
T  37665844 tagccactagactactta 37665861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 44662558 - 44662449
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| | ||||||| ||||||||| || |||||||| | |||| |||||| |||  |||||||| |  |||||||||||||||| ||||||    
T  44662558 tgagcttagctcactaggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtgaatttctc 44662459  T
Q  268 tggccgctag 277  Q
      ||||||||    
T  44662458 cagccgctag 44662449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 6548801 - 6548691
Alignment:
Q  174 ttagctcatttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    |||||||| || ||||||| |||||||| || |||||||| | |||| ||||||  ||  |||||||| |  |||||||||||||||| |||||| ||||    
T  6548801 ttagctcacttagtaaggaataatgcattatgtatgcagg-gccggggttcgaactccggacaccccactatttcacctttaaggtgaatttctccggcc 6548703  T
Q  273 gctagactactt 284  Q
    ||||| ||||||    
T  6548702 gctaggctactt 6548691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 32376504 - 32376555
Alignment:
Q  233 acaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||||||||||||| ||||||||||| ||||| | ||||||| |||||||    
T  32376504 acaccccatttattcaactttaaggtgaatttctttagccgctaaactactt 32376555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 37081355 - 37081308
Alignment:
Q  317 aaaagtaggttaaataagtaaatcgtcccctaaatatatcaacctttg 364  Q
    |||||| ||||||||||||||||  |||||||||||||||||| ||||    
T  37081355 aaaagtgggttaaataagtaaatattcccctaaatatatcaacgtttg 37081308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 8249705 - 8249763
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaa 226  Q
    |||| |||||||| ||||||| |||||||||||||| |||||||| |||||| ||||||    
T  8249705 tgagcttagctcacttggtaaaggataatgcataatatatgcaggggtcggggttcgaa 8249763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 48258266 - 48258165
Alignment:
Q  181 atttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagac 279  Q
    |||||||||| ||||||||||  | |||| ||| |||||  |||||| |||  ||||||||||||||||||||||| |||| ||| ||| |||||||| |    
T  48258266 atttggtaagtgataatgcatt-tgtatgtaggagtcggagttcgaaccccggacaccccatttattcacctttaaagtgaatttgtctagccgctaggc 48258168  T
Q  280 tac 282  Q
    |||    
T  48258167 tac 48258165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 5787462 - 5787554
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    ||||| ||||||| |||||| ||| ||||||| ||| |||||||| | |||| || ||| ||||||||||||| ||||||||||| ||||||||    
T  5787462 tgagtatagctcaattggta-ggacaatgcattattatatgcaggggccggggtttgaaccccaaacaccccacttattcaccttataaggtga 5787554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 21461747 - 21461666
Alignment:
Q  168 ttgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcac 249  Q
    ||||| ||||||||  ||||| ||| ||||||||||||||||| | |||||| |||||||| |  ||| |||| ||||||||    
T  21461747 ttgagcttagctcagctggtagggacaatgcataatttatgcaagggtcggggttcgaatctcggacatcccacttattcac 21461666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 22548221 - 22548286
Alignment:
Q  175 tagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    ||||||| |||||||||| | |||||||||||| |||| ||| || |||||| ||| |||||||||    
T  22548221 tagctcagttggtaaggacattgcataatttatacaggggtcagggttcgaaccccgaacacccca 22548286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 27788279 - 27788344
Alignment:
Q  175 tagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    ||||||| |||| | ||||| ||||||||||||||||| | |||| |||||| |||| ||||||||    
T  27788279 tagctcaattggcagggatattgcataatttatgcaggggccggggttcgaaccccagacacccca 27788344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 27791435 - 27791500
Alignment:
Q  175 tagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    ||||||| |||| | ||||| ||||||||||||||||| | |||| |||||| |||| ||||||||    
T  27791435 tagctcaattggcagggatattgcataatttatgcaggggccggggttcgaaccccagacacccca 27791500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 37411803 - 37411754
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgg 218  Q
    ||||||||||||| |||||| ||| | ||||||||||||||||| |||||    
T  37411803 tgagtttagctcaattggtagggacattgcataatttatgcaggggtcgg 37411754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 38151348 - 38151405
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaa 226  Q
    |||| |||||||| |||||| ||||| ||||| ||||||||||| |||||| ||||||    
T  38151348 tgagcttagctcagttggtagggatattgcattatttatgcaggggtcggggttcgaa 38151405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 39844388 - 39844339
Alignment:
Q  200 taatttatgcaggtgtcgggattcgaatcccaaacaccc-catttattca 248  Q
    |||| |||||| | ||||||||||||||||||||||||| ||||||||||    
T  39844388 taatatatgcaagggtcgggattcgaatcccaaacaccctcatttattca 39844339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 42554634 - 42554747
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||| |||||||||| ||| | |||||| || ||| |||||| |||  | |||| | ||||||| ||||| ||||| |||| |    
T  42554634 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggatacccgacttattcatctttatggtgaatttccc 42554733  T
Q  268 tggccgctagacta 281  Q
    | ||| ||||||||    
T  42554734 tagccactagacta 42554747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 8133890 - 8133798
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtga 260  Q
    |||| |||||||| ||| ||| ||||||||||||||||||||||| | ||   ||||||  ||| |||||||||| |||  ||||||||||||    
T  8133890 tgagcttagctcacttgataatggataatgcataatttatgcaggggccgaagttcgaactccagacaccccattaatttgcctttaaggtga 8133798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 21762949 - 21762901
Alignment:
Q  178 ctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaa 226  Q
    |||| |||||||||||| |||||| | |||||||| |||||||||||||    
T  21762949 ctcagttggtaaggatattgcatattatatgcaggggtcgggattcgaa 21762901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 26456040 - 26455984
Alignment:
Q  228 cccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||| |||| ||| ||||||||||| ||||||| ||||||| ||| |||||||||||    
T  26456040 cccagacactccagttattcaccttaaaggtgaatttctctagccactagactactt 26455984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 42338342 - 42338270
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| ||||||||||  ||||||||    
T  42338342 tgagcttagctcatttggtaaggaataatgcacaatatgtgcaggggacggggttcgaatcccggacacccca 42338270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 17077361 - 17077477
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||||| |||||| ||||||||||||| |||  |||||||| ||||||| ||| ||||||| ||| ||    
T  17077361 tgagcttagctcatttggtaagggataatgcacaatttgtgcaggggtcgggattcgaaccccggacaccccacttattcatcttaaaggtgaatttatc 17077460  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  17077461 tagccactaggctactt 17077477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 284
Target Start/End: Original strand, 3294105 - 3294199
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    ||||||||||||||||||||||| | |||| ||||||| ||  ||| |||||||||||| ||||||||||| ||||| | | |||||||||||||    
T  3294105 ggataatgcataatttatgcaggggccggggttcgaattccggacaacccatttattcatctttaaggtgaatttctatagtcgctagactactt 3294199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 260
Target Start/End: Original strand, 9628117 - 9628209
Alignment:
Q  169 tgagtttagctcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtga 260  Q
    |||| ||| ||||||||||||| ||||||||||||| ||||||||  ||||| |||||| | || |||||| |||||||||||||||||||||    
T  9628117 tgagcttaactcatttggtaagagataatgcataatatatgcaggattcggggttcgaacctcagacaccctatttattcacctttaaggtga 9628209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 38503352 - 38503236
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  38503352 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 38503253  T
Q  268 tggccgctagactactt 284  Q
    | |||  ||||||||||    
T  38503252 tagccaatagactactt 38503236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 277
Target Start/End: Original strand, 31250147 - 31250256
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  31250147 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 31250246  T
Q  268 tggccgctag 277  Q
    | ||| ||||    
T  31250247 tagccactag 31250256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 20191442 - 20191557
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||| |||| ||||||||| |||||||||  | |||||||| |||||| |||||| |||  |||| ||| ||||||||||||||||| | ||||||    
T  20191442 tgagcttaactcacttggtaagggataatgcatt-tatatgcaggggtcggggttcgaaccccggacactccacttattcacctttaaggtaaatttctc 20191540  T
Q  268 tggccgctagactactt 284  Q
    ||||| |||||||||||    
T  20191541 tggccactagactactt 20191557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 268
Target Start/End: Original strand, 43227866 - 43227966
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  43227866 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 43227965  T
Q  268 t 268  Q
    |    
T  43227966 t 43227966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 259
Target Start/End: Complemental strand, 31154341 - 31154250
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtg 259  Q
    ||||||||||||| ||| ||| ||||||| ||||||||||| ||| |  |||||||||| ||||||||||||| ||||| || |||||||||    
T  31154341 tgagtttagctcacttgataacggataatacataatttatgaaggggctgggattcgaaccccaaacaccccagttatttacttttaaggtg 31154250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 268
Target Start/End: Original strand, 34729481 - 34729571
Alignment:
Q  178 ctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    |||| ||||||||| |||||||||| | |||||||| |||||| |||||| |||  |||||||| ||||||||||||||||||| |||||||    
T  34729481 ctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaa-cccggacaccccacttattcacctttaaggtgaatttctct 34729571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 15470706 - 15470600
Alignment:
Q  179 tcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctag 277  Q
    ||||||||||||| |||||||| ||| | |||| | |  | |||||||| |||| |||||||||||||||| ||||||||||| ||||||| ||| |||     
T  15470706 tcatttggtaagggataatgcacaatatgtgcaagggctgagattcgaaccccagacaccccatttattcatctttaaggtgaatttctctagccactaa 15470607  T
Q  278 actactt 284  Q
    |||||||    
T  15470606 actactt 15470600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 285
Target Start/End: Complemental strand, 31154209 - 31154097
Alignment:
Q  173 tttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggc 271  Q
    ||||||||| ||| ||||| ||||| ||||||||||| ||| |  |||||||||| ||||||||||||| ||||| || |||||||||  ||| ||| ||    
T  31154209 tttagctcacttgataagggataatacataatttatgaaggggctgggattcgaaccccaaacaccccagttatttacttttaaggtgcattt-tctagc 31154111  T
Q  272 cgctagactactta 285  Q
    |||||| |||||||    
T  31154110 cgctaggctactta 31154097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 12256582 - 12256475
Alignment:
Q  169 tgagtttagctcatttggtaag-gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||| |||||| | ||||||||||||| |||||||| |||||| ||||||||| |         |||||||||||||||||||| ||||||    
T  12256582 tgagcttagctcacttggtatgagataatgcataatatatgcaggggtcggggttcgaatccta---------tttattcacctttaaggtgaatttctc 12256492  T
Q  268 tggccgctagactactt 284  Q
    | |||||||| ||||||    
T  12256491 tagccgctaggctactt 12256475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 15680991 - 15680880
Alignment:
Q  174 ttagctcatttggtaagga-taatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    |||||||| |||||||||| ||||||||||| ||||| |  |||   ||||||| | |  |||||||| ||||||||||||||||||| |||||||  ||    
T  15680991 ttagctcacttggtaaggaataatgcataatatatgcggtggtcaaaattcgaacctcggacaccccacttattcacctttaaggtgaatttctctaacc 15680892  T
Q  273 gctagactactt 284  Q
    ||||| ||||||    
T  15680891 gctaggctactt 15680880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 191 - 268
Target Start/End: Complemental strand, 4395923 - 4395846
Alignment:
Q  191 gataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    ||||||||||||| | |||||| | |||  |||||| |||  |||||||||||||||| ||||||||||| |||||||    
T  4395923 gataatgcataatgtgtgcaggggccggagttcgaacccctgacaccccatttattcatctttaaggtgaatttctct 4395846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 2029186 - 2029130
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||||||| ||||||||||||| ||| ||||||||| ||||||||||| ||||||||    
T  2029186 tatgcaggggtcgggattcgaaccccgaacaccccacttattcaccttataaggtga 2029130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 41083603 - 41083543
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcc 229  Q
    ||||||||||||| ||||||  || | ||||||||||||||||| |||||| |||||||||    
T  41083603 tgagtttagctcagttggtagagacattgcataatttatgcaggggtcggggttcgaatcc 41083543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 3867828 - 3867770
Alignment:
Q  188 aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttatt 246  Q
    ||||||| |||| ||| |||||||| |||||| |||||||| ||||||||||| |||||    
T  3867828 aaggatattgcaaaatatatgcaggggtcggggttcgaatctcaaacaccccacttatt 3867770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 18872528 - 18872605
Alignment:
Q  175 tagctcatttggtaaggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    ||||||| |||||| ||| ||||||| ||| |||||||| |||||| |||||| ||| ||||||||| |||||||||||    
T  18872528 tagctcagttggta-ggacaatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttattcacctt 18872605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 31991857 - 31991795
Alignment:
Q  168 ttgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcc 229  Q
    ||||| |||||||| ||||||||| ||||||||| || |||||||| |||||| |||||||||    
T  31991857 ttgagcttagctcacttggtaagggataatgcattatatatgcaggggtcggggttcgaatcc 31991795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 11017177 - 11017218
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||| |||||||||||||| ||||||    
T  11017177 tgagtttagctcagttggtagggataatgcataatatatgca 11017218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 13547450 - 13547487
Alignment:
Q  171 agtttagctcatttggtaaggataatgcataatttatg 208  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  13547450 agtttagctcaattggtaaggataatgcataatgtatg 13547487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 18928724 - 18928773
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgg 218  Q
    |||| |||||||| |||||| ||||| ||||||||||||||||| |||||    
T  18928724 tgagcttagctcagttggtagggatattgcataatttatgcaggggtcgg 18928773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 32158508 - 32158416
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||| |||||||| |||||| ||| ||||||| ||| |||||||| | |||| |||||| ||| ||||||||| ||||||||||| ||||||||    
T  32158508 tgagcttagctcaattggta-ggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattcaccttataaggtga 32158416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 33800913 - 33800989
Alignment:
Q  189 aggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtgagtt 263  Q
    |||| ||||||| ||| |||||||| | |||| |||||| |||| |||||||| ||||||||||| |||||||||||    
T  33800913 aggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttattcaccttataaggtgagtt 33800989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 43166722 - 43166762
Alignment:
Q  221 ttcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  43166722 ttcgaatcccaaacaccccacttattcaccttataaggtga 43166762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 5641775 - 5641669
Alignment:
Q  178 ctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgcta 276  Q
    |||| ||||||| |||||||||||||||||||||||   |||| ||||||  ||  |||||||| ||||||||||||||||||| ||||||| |||||||    
T  5641775 ctcacttggtaatggataatgcataatttatgcaggac-cggggttcgaactccggacaccccacttattcacctttaaggtgaatttctctagccgcta 5641677  T
Q  277 gactactt 284  Q
    ||||||||    
T  5641676 gactactt 5641669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 6228355 - 6228239
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||| ||| | |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  6228355 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 6228256  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  6228255 tagccactaggctactt 6228239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 20568351 - 20568268
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    |||| |||||||| |||||||||| | |||||||| |||||||| |||||| |||||| ||| ||||||||| |||||||||||    
T  20568351 tgagcttagctcagttggtaaggacattgcataatatatgcaggggtcggggttcgaaccccgaacaccccacttattcacctt 20568268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 17216958 - 17217074
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||||||||| | || ||| |||||  ||||||  ||  |||||||| ||||||| ||||||||||| ||||||    
T  17216958 tgagcttagctcatttggtaagggataatgcataatatgtgtaggggtcggagttcgaactccggacaccccacttattcatctttaaggtgaatttctc 17217057  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  17217058 tagccactaggctactt 17217074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 7164747 - 7164810
Alignment:
Q  221 ttcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgctagactactt 284  Q
    |||||| ||| | ||||||| ||||||||||||||||||| ||||||| |||||||||||||||    
T  7164747 ttcgaaccccgaccaccccacttattcacctttaaggtgaatttctctagccgctagactactt 7164810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 20415657 - 20415548
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||||||||||||||| |||||| |||||||| ||| | |||||| | | || |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  20415657 tgagtttagctcattttgtaagggataatgcacaatatgtgcaggggccagggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 20415558  T
Q  268 tggccgctag 277  Q
    | ||| ||||    
T  20415557 tagccactag 20415548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 24794990 - 24794877
Alignment:
Q  169 tgagtttagctcatttggtaa-ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||| |||||||||| ||| | |||||| || |||||||||| |||  ||| |||| |||||||  |||||| ||| ||||||    
T  24794990 tgagcttagctcatttggtaagggataatgcacaatatgtgcaggggttgggattcgaaccccggacatcccacttattcatatttaagatgaatttctc 24794891  T
Q  268 tggccgctagacta 281  Q
    | ||| ||||||||    
T  24794890 tagccactagacta 24794877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 1128505 - 1128395
Alignment:
Q  178 ctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttat---tcacctttaaggtgagtttctctggccg 273  Q
    |||||||| ||||| |||||||||||| | |||||| || ||| |||||| |||| |||||||||||||   ||| ||||||||||| ||||||| | |     
T  1128505 ctcatttgataagggataatgcataatatgtgcaggggttggggttcgaaccccagacaccccatttattcatcatctttaaggtgaatttctctagtca 1128406  T
Q  274 ctagactactt 284  Q
    |||||||||||    
T  1128405 ctagactactt 1128395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 18903462 - 18903346
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| ||||||||||||| |||| ||||| || ||| | |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  18903462 tgagcttagctcatttggcaagggataatacacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 18903363  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  18903362 tagccactaggctactt 18903346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 284
Target Start/End: Complemental strand, 29322066 - 29321955
Alignment:
Q  174 ttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggcc 272  Q
    |||| ||||||||||||| |||||||| ||| | |||||| |  ||| |||||| |||| ||| |||| ||||| | ||||||||||| ||||||| |||    
T  29322066 ttagatcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttatttatctttaaggtgaatttctctagcc 29321967  T
Q  273 gctagactactt 284  Q
     |||||||||||    
T  29321966 actagactactt 29321955  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 8439679 - 8439739
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcc 229  Q
    |||| |||||||| |||||| ||||| |||||| | |||||||| ||||||||||||||||    
T  8439679 tgagcttagctcagttggtagggatattgcatattatatgcaggggtcgggattcgaatcc 8439739  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 1488125 - 1488172
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt 252  Q
    |||||||  |||||| |||||| |||||||||||||||||||||||||    
T  1488125 tatgcagaggtcggggttcgaaccccaaacaccccatttattcacctt 1488172  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 9455852 - 9455945
Alignment:
Q  181 atttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgc 274  Q
    ||||||||||| |||||||||  | |||| ||| |||||  |||||| ||||||||||||| ||||||||||||||| ||| ||| ||| |||||    
T  9455852 atttggtaagggataatgcatt-tgtatgtaggggtcggagttcgaaccccaaacaccccacttattcacctttaagttgaatttttctagccgc 9455945  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 15305170 - 15305096
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccattt 243  Q
    |||||||| |||| |||||| | | | |||||||||||||||||||| ||| ||||||  |||||||| ||||||    
T  15305170 tgagtttaactcagttggtaggaacattgcataatttatgcaggtgttggggttcgaactccaaacactccattt 15305096  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 8330533 - 8330480
Alignment:
Q  221 ttcgaatcccaaacaccccatttattcacctttaaggtgagtttctctggccgc 274  Q
    |||||| || |||||| ||| ||||||||||||||||||| ||||||| |||||    
T  8330533 ttcgaagccaaaacactccacttattcacctttaaggtgaatttctctagccgc 8330480  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 268
Target Start/End: Original strand, 9357163 - 9357256
Alignment:
Q  176 agctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctct 268  Q
    |||||||||| ||||| |||||| | ||||| |||||| |  ||| ||||||  ||| |||||  ||||||||||||||||||||| |||||||    
T  9357163 agctcatttgataagggataatgtacaatttgtgcaggggctggggttcgaactccagacacctaatttattcacctttaaggtgaatttctct 9357256  T

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Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 19417842 - 19417915
Alignment:
Q  189 aggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    ||||||||| || ||| ||||||||  ||||||||||||||||| |||||||| ||||||| ||| ||||||||    
T  19417842 aggataatgtattattatatgcagggatcgggattcgaatcccagacaccccacttattcatcttataaggtga 19417915  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 18631509 - 18631553
Alignment:
Q  205 tatgcaggtgtcgggattcgaatcccaaacaccccatttattcac 249  Q
    |||||||| ||||||||||||| |||||| |||||| ||||||||    
T  18631509 tatgcaggggtcgggattcgaaccccaaataccccacttattcac 18631553  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 19221700 - 19221816
Alignment:
Q  169 tgagtttagctcatttggt-aaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||||||| |||||||||| ||| |||||||||||  | |||||| |  | | ||||||  ||| ||||||||||| ||||  |||||||||| ||||||    
T  19221700 tgagtttaactcatttggtgaagaataatgcataacatgtgcaggggctgaggttcgaactccagacaccccatttgttcatttttaaggtgaatttctc 19221799  T
Q  268 tggccgctagactactt 284  Q
    | ||| ||||| |||||    
T  19221800 tagccactagattactt 19221816  T

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Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 419712 - 419828
Alignment:
Q  169 tgagtttagctcatttggtaagg-ataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttctc 267  Q
    |||| |||||||||||||||||| |||||| | ||| | |||||| | |||| |||||| |||  |||||||| ||||||| ||||||||||| ||||||    
T  419712 tgagcttagctcatttggtaagggataatgaacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctc 419811  T
Q  268 tggccgctagactactt 284  Q
    | ||| |||| ||||||    
T  419812 tagccactaggctactt 419828  T

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Target: scaffold0250 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 15009 - 15080
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatcccaaacacccca 240  Q
    |||| |||||||| |||||| ||| | ||||||||||||||||| |||  | |||||| |||||||||||||    
T  15009 tgagcttagctcagttggtagggacattgcataatttatgcaggggtcatggttcgaaccccaaacacccca 15080  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 132267 - 132322
Alignment:
Q  173 tttagctcatttggtaaggataatgcataatttatgcaggtgtcgggattcgaatc 228  Q
    ||||||||| ||| || ||| |||||||||| ||||||||||||||| ||||||||    
T  132267 tttagctcaattgatagggaaaatgcataatatatgcaggtgtcggggttcgaatc 132322  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 101851 - 101924
Alignment:
Q  189 aggataatgcataatt-tatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctt-taaggtga 260  Q
    |||||||||||| ||| |||||||| | |||| |||||| |||||||| |||| ||||||||||| ||||||||    
T  101851 aggataatgcattattatatgcaggggccggggttcgaaccccaaacatcccacttattcaccttataaggtga 101924  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 239808 - 239849
Alignment:
Q  169 tgagtttagctcatttggtaaggataatgcataatttatgca 210  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  239808 tgagtttagctcagttggtaaggacaatgcataatatatgca 239849  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 266
Target Start/End: Complemental strand, 15403 - 15328
Alignment:
Q  190 ggataatgcataatttatgcaggtgtcgggattcgaatcccaaacaccccatttattcacctttaaggtgagtttct 266  Q
    |||||||||||| |||||||||| |||||| |||||| |||| ||| | || | ||||| ||||||||||| |||||    
T  15403 ggataatgcata-tttatgcaggggtcggggttcgaaccccagacatcgcagtcattcatctttaaggtgaatttct 15328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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