View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2030_low_19 (Length: 353)

Name: NF2030_low_19
Description: NF2030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2030_low_19
NF2030_low_19
[»] chr4 (20 HSPs)
chr4 (128-343)||(17282476-17282690)
chr4 (128-343)||(25239694-25239908)
chr4 (128-343)||(13861313-13861527)
chr4 (128-292)||(12885330-12885494)
chr4 (128-342)||(10985699-10985912)
chr4 (128-292)||(3270596-3270760)
chr4 (128-292)||(3268384-3268548)
chr4 (128-342)||(21332530-21332743)
chr4 (128-292)||(12217611-12217769)
chr4 (148-308)||(9901707-9901867)
chr4 (143-292)||(49402742-49402893)
chr4 (142-265)||(16396266-16396389)
chr4 (143-279)||(45313209-45313344)
chr4 (151-276)||(26780824-26780949)
chr4 (200-291)||(8082095-8082186)
chr4 (277-343)||(18284661-18284725)
chr4 (241-291)||(28891959-28892009)
chr4 (149-279)||(34845463-34845594)
chr4 (282-343)||(10422046-10422106)
chr4 (138-192)||(18284611-18284665)
[»] chr6 (26 HSPs)
chr6 (128-340)||(29095003-29095214)
chr6 (128-300)||(7968480-7968652)
chr6 (128-342)||(4409196-4409410)
chr6 (128-265)||(17757003-17757140)
chr6 (128-342)||(8306064-8306274)
chr6 (128-343)||(23574393-23574608)
chr6 (143-292)||(12738545-12738694)
chr6 (138-293)||(15119716-15119871)
chr6 (128-292)||(18736050-18736214)
chr6 (143-343)||(14910604-14910805)
chr6 (143-292)||(19860052-19860201)
chr6 (128-292)||(29482641-29482805)
chr6 (138-292)||(24438557-24438711)
chr6 (128-292)||(18728971-18729135)
chr6 (153-291)||(15349639-15349777)
chr6 (142-292)||(18258594-18258744)
chr6 (177-292)||(18014492-18014607)
chr6 (153-291)||(15318989-15319127)
chr6 (246-342)||(18043340-18043436)
chr6 (148-286)||(3876374-3876512)
chr6 (202-278)||(23524128-23524204)
chr6 (128-218)||(21508624-21508714)
chr6 (248-316)||(19885769-19885837)
chr6 (139-185)||(14467174-14467220)
chr6 (241-285)||(7099325-7099369)
chr6 (241-285)||(8795261-8795305)
[»] chr7 (16 HSPs)
chr7 (128-343)||(47295667-47295881)
chr7 (128-343)||(21592863-21593077)
chr7 (128-340)||(18153131-18153342)
chr7 (135-343)||(18185624-18185831)
chr7 (128-343)||(29164848-29165063)
chr7 (128-292)||(20093586-20093750)
chr7 (128-340)||(30770173-30770384)
chr7 (142-293)||(9548968-9549119)
chr7 (128-342)||(21802450-21802664)
chr7 (128-292)||(22705649-22705813)
chr7 (143-292)||(2249992-2250141)
chr7 (128-288)||(7595403-7595563)
chr7 (238-342)||(22703896-22704000)
chr7 (144-276)||(30764982-30765114)
chr7 (200-291)||(28794085-28794176)
chr7 (148-279)||(38612620-38612751)
[»] chr5 (18 HSPs)
chr5 (128-343)||(20899582-20899796)
chr5 (128-343)||(5590683-5590897)
chr5 (128-343)||(23495348-23495562)
chr5 (128-343)||(36712635-36712849)
chr5 (128-336)||(33622476-33622686)
chr5 (128-343)||(28068009-28068224)
chr5 (128-292)||(5931240-5931404)
chr5 (128-218)||(22510105-22510195)
chr5 (142-292)||(42792531-42792681)
chr5 (176-343)||(38608266-38608433)
chr5 (142-292)||(15620191-15620341)
chr5 (128-342)||(8244511-8244730)
chr5 (131-211)||(13537860-13537940)
chr5 (200-292)||(22922696-22922788)
chr5 (142-282)||(41037645-41037785)
chr5 (200-292)||(22922099-22922191)
chr5 (179-270)||(19329961-19330052)
chr5 (142-191)||(24095343-24095392)
[»] scaffold0362 (1 HSPs)
scaffold0362 (128-343)||(7336-7549)
[»] scaffold0265 (3 HSPs)
scaffold0265 (128-343)||(14871-15085)
scaffold0265 (238-343)||(17086-17190)
scaffold0265 (128-198)||(17197-17267)
[»] chr1 (12 HSPs)
chr1 (128-343)||(21817724-21817938)
chr1 (128-343)||(24973872-24974086)
chr1 (201-343)||(22186045-22186186)
chr1 (128-342)||(19967404-19967618)
chr1 (132-342)||(19442100-19442310)
chr1 (238-343)||(21815619-21815723)
chr1 (203-343)||(8990822-8990962)
chr1 (142-292)||(9859017-9859171)
chr1 (163-297)||(8995459-8995592)
chr1 (128-198)||(21815542-21815612)
chr1 (128-238)||(49472309-49472417)
chr1 (148-300)||(38621845-38621997)
[»] chr8 (15 HSPs)
chr8 (128-343)||(25820716-25820930)
chr8 (128-293)||(18040467-18040632)
chr8 (128-293)||(32008999-32009164)
chr8 (139-293)||(18574014-18574168)
chr8 (130-342)||(2085730-2085942)
chr8 (154-300)||(10532801-10532947)
chr8 (128-343)||(7999649-7999862)
chr8 (128-343)||(7454652-7454867)
chr8 (143-292)||(41280811-41280959)
chr8 (260-343)||(1788650-1788732)
chr8 (142-274)||(24033833-24033965)
chr8 (148-291)||(11709419-11709562)
chr8 (240-292)||(33273604-33273656)
chr8 (239-291)||(24060609-24060661)
chr8 (137-193)||(10532735-10532791)
[»] scaffold0096 (1 HSPs)
scaffold0096 (128-343)||(10858-11072)
[»] scaffold0084 (1 HSPs)
scaffold0084 (129-300)||(54590-54761)
[»] chr2 (13 HSPs)
chr2 (135-343)||(27347170-27347376)
chr2 (144-342)||(41266197-41266396)
chr2 (142-292)||(25133933-25134083)
chr2 (128-342)||(23755804-23756018)
chr2 (128-288)||(3770314-3770474)
chr2 (149-292)||(42534129-42534272)
chr2 (142-343)||(3105203-3105404)
chr2 (128-291)||(26154968-26155131)
chr2 (128-343)||(23929796-23930011)
chr2 (128-292)||(19092771-19092935)
chr2 (149-292)||(29568365-29568507)
chr2 (263-342)||(26159154-26159233)
chr2 (240-291)||(22452917-22452968)
[»] scaffold0034 (1 HSPs)
scaffold0034 (128-342)||(47401-47615)
[»] scaffold0989 (1 HSPs)
scaffold0989 (128-342)||(1507-1721)
[»] scaffold0042 (2 HSPs)
scaffold0042 (142-292)||(68723-68873)
scaffold0042 (142-292)||(74895-75045)
[»] scaffold0170 (1 HSPs)
scaffold0170 (128-300)||(16301-16473)
[»] scaffold0002 (2 HSPs)
scaffold0002 (128-343)||(391458-391673)
scaffold0002 (128-292)||(380811-380975)
[»] chr3 (10 HSPs)
chr3 (128-271)||(19790346-19790489)
chr3 (128-343)||(22915051-22915266)
chr3 (163-300)||(16853029-16853166)
chr3 (148-284)||(16914764-16914900)
chr3 (142-266)||(44635823-44635947)
chr3 (244-291)||(22006543-22006590)
chr3 (244-291)||(22014060-22014107)
chr3 (261-342)||(1998006-1998087)
chr3 (245-291)||(3559221-3559267)
chr3 (240-285)||(36639651-36639696)
[»] scaffold0058 (2 HSPs)
scaffold0058 (132-292)||(1658-1819)
scaffold0058 (200-292)||(15415-15507)
[»] scaffold0150 (1 HSPs)
scaffold0150 (128-292)||(30043-30207)
[»] scaffold0280 (1 HSPs)
scaffold0280 (128-292)||(1026-1190)
[»] scaffold0008 (2 HSPs)
scaffold0008 (143-284)||(242731-242872)
scaffold0008 (143-343)||(253312-253512)
[»] scaffold0083 (1 HSPs)
scaffold0083 (148-292)||(4202-4346)
[»] scaffold0026 (1 HSPs)
scaffold0026 (128-292)||(151277-151440)
[»] scaffold0192 (1 HSPs)
scaffold0192 (176-292)||(12373-12489)
[»] scaffold0013 (1 HSPs)
scaffold0013 (200-291)||(37283-37374)
[»] scaffold0111 (1 HSPs)
scaffold0111 (128-286)||(2816-2974)
[»] scaffold0299 (1 HSPs)
scaffold0299 (238-342)||(19150-19254)
[»] scaffold0011 (1 HSPs)
scaffold0011 (199-291)||(20341-20433)
[»] scaffold0063 (2 HSPs)
scaffold0063 (200-291)||(49284-49375)
scaffold0063 (202-291)||(36839-36928)
[»] scaffold0483 (1 HSPs)
scaffold0483 (142-229)||(9247-9335)
[»] scaffold0025 (1 HSPs)
scaffold0025 (240-292)||(86460-86512)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 9e-95; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 17282476 - 17282690
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17282476 tgcacggaacgaaagagactggttctaacgaaccccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcgtaac 17282575  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||| |||||||    
T  17282576 cgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg-tagaacctttcctcctctc 17282674  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  17282675 aaaccctcactctctg 17282690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 25239908 - 25239694
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| | ||| ||||    
T  25239908 tgcacggaacgaaagagactggttcaaacgaaccccaaagtctctttccacgttcccgcaataaactcacaggcggttacacttcccacaatttcgtaac 25239809  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||| |||||    
T  25239808 cgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactaaatgcagtccccaagg-tagaatctttctttctctc 25239710  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  25239709 aaaccctcactctctg 25239694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 13861527 - 13861313
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||    
T  13861527 tgcacggaacgaaagataccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacacttcccacgatttcgtaac 13861428  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
     |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||  ||||| |||||||||||||| ||||    
T  13861427 tgttagagtaaggtgtgccattacaacggctttgcagccctccacctctataaatagggaactcaatgcagtccccaagg-tagaatctttcttcttctc 13861329  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  13861328 aaaccctcactctctg 13861313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 12885494 - 12885330
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||| ||| ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| | |  ||||||||||||||||||| ||| ||||    
T  12885494 tgcatggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaac 12885395  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||  ||||  |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  12885394 cgccagagccaggtgtgccattacaatggctctgcagccctccacctttataaataggggactca 12885330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 128 - 342
Target Start/End: Original strand, 10985699 - 10985912
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||| || |||| |||||||||||||||||||  |||||||||| | |||||||||||||||||| | |  ||||||||||||||||||| ||| ||||    
T  10985699 tgcacagagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaac 10985798  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatct--ttcttcctc 325  Q
    ||  ||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||  ||||| ||||||||   ||||||||    
T  10985799 cgcgagagccaggtgtgccattacaacggctctgcagccatccacctctataaataggggactcacggcagtc-ccaagg-tagaatctacctcttcctc 10985896  T
Q  326 tcaaaccctcactctct 342  Q
     ||||||||||||||||    
T  10985897 -caaaccctcactctct 10985912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 3270760 - 3270596
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| | | ||||||||||||||||||||  |||||||||  | |||||||||||||||||| | | |||||||||||||||||||| ||| ||||    
T  3270760 tgcacggagcaacagagactggttcaaacgaaccacaacgtctcactacacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaac 3270661  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    |   ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3270660 caccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 3270596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 3268548 - 3268384
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||| ||||||||||||||||||||  |||||||||| | |||||||||||||||||| |    ||||||||||||||||||| | | ||||    
T  3268548 tgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgattacgtaac 3268449  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||  ||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  3268448 cgccagagccaggtgtgtcattacaatggctctgcagccctccacctctataaataggggactca 3268384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 128 - 342
Target Start/End: Original strand, 21332530 - 21332743
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||| || ||||||||||||||||||||||||  |||||||||| | ||||||||| ||||||||   |  ||||||| |||||||| || ||| |||     
T  21332530 tgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccacaataaactttctggcggttatacttcccatgatttcgtaag 21332629  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||  ||||  |||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||   ||||| |||||||| |||    |||    
T  21332630 cgccagagccaggtgtgccactacaacggctctgcagccctccacctctgtaaataggggactcaaagcagtttccaagg-tagaatctatctcttcctc 21332728  T
Q  328 aaaccctcactctct 342  Q
    |||||||||||||||    
T  21332729 aaaccctcactctct 21332743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 12217769 - 12217611
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||| ||||||||||||||||||||  |||||||||| | |||||||| ||||||||| | |  |||||||||||||| |||| ||| ||||    
T  12217769 tgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctggcggttacacttcctacgatttcgtaac 12217670  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||  ||||  ||||      |||||||||||||||||||||||||||||||||||||||||||||    
T  12217669 cgccagagccaggt------ttacaacggctctgcagccctccacctctataaataggggactca 12217611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 148 - 308
Target Start/End: Original strand, 9901707 - 9901867
Alignment:
Q  148 ggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgcca 247  Q
    |||||||| ||||  |||||||||| |  || |||||||||||| | | | ||||||||||| |||||||| ||| ||||||| ||||  ||||||||||    
T  9901707 ggttcaaatgaaccacaacgtctctctggacattcccgcaataatctctctagcggttacacgtcccacgatttcgtaaccgtcagagccaggtgtgcca 9901806  T
Q  248 ttacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggt 308  Q
    |||||||||||||||| ||||||||||||||| |||||||||||   |||||| |||||||    
T  9901807 ttacaacggctctgcaaccctccacctctatatataggggactcttagcagtcctcaaggt 9901867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 143 - 292
Target Start/End: Complemental strand, 49402893 - 49402742
Alignment:
Q  143 agactggttcaaacgaactccaacgtctctttc--cacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaagg 240  Q
    |||| |||||||||| ||| |||||||||| ||  |||||| ||||||||| | |    |||||||||||| ||||||  || ||||||  ||||   ||    
T  49402893 agaccggttcaaacggactacaacgtctctctctgcacgtttccgcaataatctctatggcggttacactttccacgatctcgtaaccgccagagcctgg 49402794  T
Q  241 tgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49402793 tgtgccattacaacggctctgcagccctccacctctatatataggggactca 49402742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 16396266 - 16396389
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    ||||||||||||| |||||  |||||||||| | |||||||||||||||||| | |  |||||||||||||||| || ||| ||| ||  ||||| ||||    
T  16396266 gagactggttcaagcgaaccacaacgtctctctacacgttcccgcaataaacactctggcggttacacttcccatgatttcctaatcgccagagtcaggt 16396365  T
Q  242 gtgccattacaacggctctgcagc 265  Q
    |||||| |||||||||||||||||    
T  16396366 gtgccactacaacggctctgcagc 16396389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 279
Target Start/End: Complemental strand, 45313344 - 45313209
Alignment:
Q  143 agactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtg 242  Q
    ||||||||||||||||||| |||||||||| | ||||||||| |||||| | | |  ||||||||||||||||||| ||| ||||||  ||||   ||||    
T  45313344 agactggttcaaacgaactacaacgtctctctgcacgttccc-caataatctctctggcggttacacttcccacgatttcgtaaccgccagagcctggtg 45313246  T
Q  243 tgccattacaacggctctgcagccctccacctctata 279  Q
    |||||||||||||| | |||| ||||| |||||||||    
T  45313245 tgccattacaacggatttgcaaccctctacctctata 45313209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 276
Target Start/End: Original strand, 26780824 - 26780949
Alignment:
Q  151 tcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccatta 250  Q
    ||||||||||  |||||| ||| | |||||||||||||||| | | |  ||||||||||||||||||  ||| |||||   |||||  |||||| |||||    
T  26780824 tcaaacgaaccacaacgtttctctgcacgttcccgcaataatctctctggcggttacacttcccacgttttcgtaaccaccagagtctggtgtgtcatta 26780923  T
Q  251 caacggctctgcagccctccacctct 276  Q
    ||||||||||||||||||||||||||    
T  26780924 caacggctctgcagccctccacctct 26780949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 8082186 - 8082095
Alignment:
Q  200 gcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    |||||||||||| |||||| ||| |||| ||| ||   |||||||||||||||| |||||||||| |||||||||||||| |||||||||||    
T  8082186 gcggttacactttccacgatttcgtaactgttggacccaggtgtgccattacaatggctctgcagtcctccacctctatatataggggactc 8082095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 343
Target Start/End: Original strand, 18284661 - 18284725
Alignment:
Q  277 ataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctcaaaccctcactctctg 343  Q
    ||||||||||||||||||||||||  ||||| |||||||| ||||||||| ||||||||||||||||    
T  18284661 ataaataggggactcaatgcagtccccaagg-tagaatctctcttcctct-aaaccctcactctctg 18284725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 241 - 291
Target Start/End: Complemental strand, 28892009 - 28891959
Alignment:
Q  241 tgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  28892009 tgtgccattacaacggctatgcagctctccacctctatatataggggactc 28891959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 279
Target Start/End: Original strand, 34845463 - 34845594
Alignment:
Q  149 gttcaaacgaactccaacgtctctttcc-acgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgcca 247  Q
    ||||||| |||||  ||||||||||||| || |||||||||  | | |||  ||||||||||||||||||| ||| ||||||| |||   | ||||||||    
T  34845463 gttcaaatgaactttaacgtctctttcccacattcccgcaaatatctcaccggcggttacacttcccacgatttcgtaaccgtcagacacatgtgtgcca 34845562  T
Q  248 ttacaacggctctgcagccctccacctctata 279  Q
    |||||||| |||||||  |  |||||||||||    
T  34845563 ttacaacgactctgcattcacccacctctata 34845594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 10422106 - 10422046
Alignment:
Q  282 taggggactcaatgcagtcatcaaggttagaatctttcttcctctcaaaccctcactctctg 343  Q
    |||||||||||||||||||  |||||| ||||| ||||||||||  ||||||||||||||||    
T  10422106 taggggactcaatgcagtccccaaggt-agaatatttcttcctcaaaaaccctcactctctg 10422046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 18284611 - 18284665
Alignment:
Q  138 gaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaa 192  Q
    |||||||||||| |||||||||| ||||||||| |||  |||||||| |||||||    
T  18284611 gaaagagactgggtcaaacgaaccccaacgtcttttttaacgttcccacaataaa 18284665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 3e-88; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 128 - 340
Target Start/End: Original strand, 29095003 - 29095214
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||    
T  29095003 tgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaac 29095102  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  29095103 cgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg-tagaatctttcttcctctc 29095201  T
Q  328 aaaccctcactct 340  Q
    |||||||||||||    
T  29095202 aaaccctcactct 29095214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 128 - 300
Target Start/End: Original strand, 7968480 - 7968652
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||||||||||||||||||||||||||||  |||||||||| | ||||||||| |||||||||| |  |||||||||||| |||| | ||| ||||    
T  7968480 tgcacggaacgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaaccccctggcggttacactttccacaatttcgtaac 7968579  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtc 300  Q
    ||  ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  7968580 cgccagagtcaggtgtgccattacaacagctctgcagccctccacctctatatataggggactcaatgcagtc 7968652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 128 - 342
Target Start/End: Complemental strand, 4409410 - 4409196
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| | |||||||||||||||||| | | |||||||||||||| ||||| ||  ||||    
T  4409410 tgcacggagcgaaagagactggttcaaacgaaccacaacgtctctatgcacgttcccgcaataaacgccctagcggttacacttctcacgattttgtaac 4409311  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    ||  |||| |||||||||||||  ||||||| ||||||||||||||||||||||||| ||| |||||||||||  ||||| |||||||  | ||||||||    
T  4409310 cgccagagcaaggtgtgccattgtaacggctttgcagccctccacctctataaatagaggattcaatgcagtccccaagg-tagaatctatctcttcctc 4409212  T
Q  326 tcaaaccctcactctct 342  Q
    | |||||||||||||||    
T  4409211 t-aaaccctcactctct 4409196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 128 - 265
Target Start/End: Original strand, 17757003 - 17757140
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||| ||  ||||    
T  17757003 tgcacggaacgaaaaagattggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcacaggcggttacacttcccacgattttgtaac 17757102  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagc 265  Q
    ||| |||||||||||||||||||||||||||| |||||    
T  17757103 cgtcagagtaaggtgtgccattacaacggctcggcagc 17757140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 128 - 342
Target Start/End: Complemental strand, 8306274 - 8306064
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||| || ||||||||||||||||||||||    |||||||||| |  | ||||||||||||||| | |  |||||||||||| ||| || ||||||||    
T  8306274 tgcacagagcgaaagagactggttcaaacgagtcacaacgtctctctgtaggttcccgcaataaactctctggcggttacactttccatgatttcataac 8306175  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
     | |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||  ||||| |||||||  |||||||||     
T  8306174 tgctagagtcaggtgtgccattacaacggctctgcaaccctccacctctataaataggggactcacagcagtccccaagg-tagaatc--tcttcctct- 8306079  T
Q  328 aaaccctcactctct 342  Q
    |||||||||||||||    
T  8306078 aaaccctcactctct 8306064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 23574608 - 23574393
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||| |||||||||||||||||||  |||||||||| | || |||| |||||||||| | |  | |||||||||| |||||| ||| ||||    
T  23574608 tgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctacatgttctcgcaataaactctctggtggttacactttccacgacttcgtaac 23574509  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
     |  ||||  | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||| |||||||  | ||||||||    
T  23574508 agccagagccaagtgtgccattacaacggctctgcagccctctacctctataaataggggactcaaagcagtccacaagg-tagaatctatctcttcctc 23574410  T
Q  326 tcaaaccctcactctctg 343  Q
    | ||||||||||||||||    
T  23574409 t-aaaccctcactctctg 23574393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 143 - 292
Target Start/End: Complemental strand, 12738694 - 12738545
Alignment:
Q  143 agactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtg 242  Q
    ||||| ||||||||||||  |||||||||| | |||||||||||||||||| | | || ||||||||||||||||| ||| ||| ||| | ||  || ||    
T  12738694 agactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagaggttacacttcccacgatttcgtaatcgtcatagccagatg 12738595  T
Q  243 tgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12738594 tgccattacaacggctctgcaaccctccacctctataaataggggactca 12738545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 293
Target Start/End: Original strand, 15119716 - 15119871
Alignment:
Q  138 gaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagta 237  Q
    ||||||||| |||||||||||||  |||||||||| | |||||||||||||||||| | | |||||||| ||||||||||| ||  ||||||  ||||      
T  15119716 gaaagagacaggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcggttatacttcccacgattttgtaaccgccagagcc 15119815  T
Q  238 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaa 293  Q
    |||||||||||||||  ||||||||| | |||||||||||||||||||||||||||    
T  15119816 aggtgtgccattacactggctctgcaactctccacctctataaataggggactcaa 15119871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 18736214 - 18736050
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  |||| |||||||||||| |  |||||||||| | |||||||||||||||||| | |  ||| ||| ||||||||| | ||| ||||    
T  18736214 tgcacggagcgagcgagattggttcaaacgagccacaacgtctctctacacgttcccgcaataaactctctggcgattagacttcccacaatttcgtaac 18736115  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||  ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18736114 cgccagagccaggtgtgccattacaacggctcagcagccctccacctctataaataggggactca 18736050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 143 - 343
Target Start/End: Complemental strand, 14910805 - 14910604
Alignment:
Q  143 agactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtg 242  Q
    |||| |||||||||||||  |||||||||| | |||||||||||||||||| |    ||||||||||||||||| | ||| |||| |  ||||  | |||    
T  14910805 agaccggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacaatttcgtaactgccagagcgatgtg 14910706  T
Q  243 tgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatct--ttcttcctctcaaaccctcactct 340  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||  ||||||   |||||   ||||||||| |||||||||||||    
T  14910705 tgccattacaacggctttgcagccctccacctctatatataggggactcactgcagtccccaaggtagaaatctagctcttcctct-aaaccctcactct 14910607  T
Q  341 ctg 343  Q
    |||    
T  14910606 ctg 14910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 292
Target Start/End: Original strand, 19860052 - 19860201
Alignment:
Q  143 agactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtg 242  Q
    ||||||||||||||||||  ||||||||||   || |||||| |||||| | | |  | ||||||||||||||||| ||| ||||||  ||||  |||||    
T  19860052 agactggttcaaacgaaccgcaacgtctctcaacatgttcccacaataatctctctggtggttacacttcccacgatttcgtaaccgccagagccaggtg 19860151  T
Q  243 tgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19860152 tcccattacaacggctccgcagccctccacctctataaataggggactca 19860201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 29482805 - 29482641
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  ||||| ||||||||||| |  |||||||||| | || ||||||||||||||| | |   | |||| ||||||||||| ||| ||||    
T  29482805 tgcacggagcgagcgagaccggttcaaacgagccacaacgtctctctgcatgttcccgcaataaactctctcacagttatacttcccacgatttcgtaac 29482706  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    || ||||   |||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  29482705 cgctagaaccaggtgtgccattacaacgactctacagccctccacctctataaataggggactca 29482641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 292
Target Start/End: Original strand, 24438557 - 24438711
Alignment:
Q  138 gaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagta 237  Q
    |||||||| ||||||||||||||  || ||||||||| |||||||| ||||| ||| |    ||||||||||||||||||| ||| ||||||  ||||      
T  24438557 gaaagagattggttcaaacgaaccacatcgtctctttgcacgttcctgcaatcaactctatggcggttacacttcccacgatttcgtaaccgcaagagcc 24438656  T
Q  238 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||| |||||||||| |||||||  |||| ||||||||||||||||||||||    
T  24438657 aggtgtgtcattacaacgactctgcaatcctctacctctataaataggggactca 24438711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 18729135 - 18728971
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||| ||||| |||||||| || |  |||||||||| | |||||| ||||||||||| |    ||||||||||||||||||| ||  || |    
T  18729135 tgcacggagcgaacgagaccggttcaaaggagccacaacgtctctctgcacgtttccgcaataaactctatggcggttacacttcccacgattttgtacc 18729036  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||  ||||  |||||| ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  18729035 cgccagagccaggtgttccattacaatgtctctgcagccctccacctctataaataggggactca 18728971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 153 - 291
Target Start/End: Original strand, 15349639 - 15349777
Alignment:
Q  153 aaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattaca 252  Q
    ||||||||  |||| ||||||| ||||||||| |||||| | | |  ||||||||||||||||||| ||| ||||||  |||   |||||||| || |||    
T  15349639 aaacgaaccacaacatctctttgcacgttcccacaataatctctctcgcggttacacttcccacgatttcgtaaccgccagacccaggtgtgctatcaca 15349738  T
Q  253 acggctctgcagccctccacctctataaataggggactc 291  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  15349739 acggctctgcagccctccacctctatatataggggactc 15349777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 142 - 292
Target Start/End: Original strand, 18258594 - 18258744
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    ||||| |||||||| ||||  ||||||||||   ||| |||||||||||||| |   ||| |||||||||||||| | ||| ||||| | ||||  ||||    
T  18258594 gagaccggttcaaaggaaccacaacgtctctccgcacattcccgcaataaactctttagcagttacacttcccacaatttcgtaaccatcagagccaggt 18258693  T
Q  242 gtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||    
T  18258694 gtgccactacaacggctctacagccctctacctctataaataggggactca 18258744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 18014492 - 18014607
Alignment:
Q  177 acgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctct 276  Q
    ||||||||||||||| | | |  | ||||| ||||||||||| ||| ||||||  ||||  |||||||||||||||||||||||||||||||||||||||    
T  18014492 acgttcccgcaataatctctctggtggttagacttcccacgatttcgtaaccgccagagctaggtgtgccattacaacggctctgcagccctccacctct 18014591  T
Q  277 ataaataggggactca 292  Q
    |||  |||||||||||    
T  18014592 atatgtaggggactca 18014607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 291
Target Start/End: Original strand, 15318989 - 15319127
Alignment:
Q  153 aaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattaca 252  Q
    ||||||||  |||| ||||||| |||||||| ||||||| | | | |||||||||||||||||||| ||| ||||||  |||   |||||| |||| |||    
T  15318989 aaacgaaccacaacttctctttgcacgttcctgcaataatctctctagcggttacacttcccacgatttcgtaaccgccagacctaggtgtaccatcaca 15319088  T
Q  253 acggctctgcagccctccacctctataaataggggactc 291  Q
    ||| ||||||||||||||||||||||| |||||| ||||    
T  15319089 acgactctgcagccctccacctctatatatagggaactc 15319127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 18043436 - 18043340
Alignment:
Q  246 cattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaa--tctttcttcctctcaaaccctcactctct 342  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  ||||| |||||  | | ||||||||| |||||||||||||||    
T  18043436 cattacaacggctttgcagccctccacctctataaataggggactaaatgcagtccccaagg-tagaatttatctcttcctct-aaaccctcactctct 18043340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 286
Target Start/End: Complemental strand, 3876512 - 3876374
Alignment:
Q  148 ggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgcca 247  Q
    |||||||| || || |||||||||||| ||  |||||||||||| | | |   || |||||||||| |||| ||| ||||||  ||| | ||||||| |     
T  3876512 ggttcaaatgagctacaacgtctctttgcatattcccgcaataatctctctgacgattacacttcctacgatttcgtaaccgccagacttaggtgtgtct 3876413  T
Q  248 ttacaacggctctgcagccctccacctctataaataggg 286  Q
    | |||||||||||||||||||||||||||||| ||||||    
T  3876412 tcacaacggctctgcagccctccacctctatatataggg 3876374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 23524204 - 23524128
Alignment:
Q  202 ggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctat 278  Q
    |||||||||| |||||| ||| ||||||  ||||  |||||||||||||||| |||||||||||||||||| |||||    
T  23524204 ggttacactttccacgatttcttaaccgccagagccaggtgtgccattacaatggctctgcagccctccacgtctat 23524128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 21508624 - 21508714
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacga 218  Q
    |||||||| |||||||||||||||||| |||||  || ||||||| | |||||||| ||||||||| |    |||||||||||||||||||    
T  21508624 tgcacggagcgaaagagactggttcaatcgaaccacagcgtctctctgcacgttcctgcaataaactctatggcggttacacttcccacga 21508714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 316
Target Start/End: Complemental strand, 19885837 - 19885769
Alignment:
Q  248 ttacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatct 316  Q
    ||||||||||||||||||| ||| |||||||| | |||||||||  |||||||  ||||| ||||||||    
T  19885837 ttacaacggctctgcagccatccgcctctatataaaggggactctttgcagtccccaagggtagaatct 19885769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 14467220 - 14467174
Alignment:
Q  139 aaagagactggttcaaacgaactccaacgtctctttccacgttcccg 185  Q
    ||||||||  ||||||||||||| ||||||||||| |||||||||||    
T  14467220 aaagagaccagttcaaacgaactacaacgtctcttcccacgttcccg 14467174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 7099325 - 7099369
Alignment:
Q  241 tgtgccattacaacggctctgcagccctccacctctataaatagg 285  Q
    |||||||||||||||||||||||  |  |||||||||||||||||    
T  7099325 tgtgccattacaacggctctgcattcacccacctctataaatagg 7099369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 8795305 - 8795261
Alignment:
Q  241 tgtgccattacaacggctctgcagccctccacctctataaatagg 285  Q
    |||||||||||||||||||||||  |  |||||||||||||||||    
T  8795305 tgtgccattacaacggctctgcattcacccacctctataaatagg 8795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 1e-87; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 47295667 - 47295881
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| ||| ||||    
T  47295667 tgcacggaacgaaggagactggttcaaacgaaccccaacgtctctctccaccttcccgcaataaactcacaagcgtttacacttcccacgatttcgtaac 47295766  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  47295767 cgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg-tagaatctttcttcctctc 47295865  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  47295866 aaaccctcactctctg 47295881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 21592863 - 21593077
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |  |||  |||||||||||||||||| ||  ||||    
T  21592863 tgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgtaataagctaacagacggttacacttcccacgattttgtaac 21592962  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||||||||     
T  21592963 cgtcagagtaaggtgtgccattacaacggctcagcagccctccacctctataaataggggactcaatgcagtccccaagg-tagaagctttcttcctcta 21593061  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  21593062 aaaccctcactctctg 21593077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 128 - 340
Target Start/End: Complemental strand, 18153342 - 18153131
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | || ||||||||||||||||| | ||| ||||    
T  18153342 tgcacggaacaaaagagactggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcgcaggcggttacacttcccaccatttcgtaac 18153243  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||    
T  18153242 cgtcagagtaagctgtgccattacaacgactcggcagccctccacctctataaataggggactcaatgcattccccaagg-tagaatctttcttcctctc 18153144  T
Q  328 aaaccctcactct 340  Q
    |||||||||||||    
T  18153143 aaaccctcactct 18153131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 135 - 343
Target Start/End: Complemental strand, 18185831 - 18185624
Alignment:
Q  135 aacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttaga 234  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||| ||| ||||||| |||    
T  18185831 aacgaaagagactggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcgcaagcggttacacttcccgcgatttcgtaaccgtcaga 18185732  T
Q  235 gtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctcaaaccct 334  Q
    |||||||||||| ||| ||||||||||||||||||||| | ||| |||||||||||||||||||||  | ||  ||||||||||||||||||||||||||    
T  18185731 gtaaggtgtgccgttaaaacggctctgcagccctccacatttattaataggggactcaatgcagtc-cccagcgtagaatctttcttcctctcaaaccct 18185633  T
Q  335 cactctctg 343  Q
    |||||||||    
T  18185632 cactctctg 18185624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 29165063 - 29164848
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||| |||||||||||||||||||  |||||||||| | |||||||||||||||||| | | ||| |||||||||||||||| ||| ||||    
T  29165063 tgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcagttacacttcccacgatttcgtaac 29164964  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
       |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||  ||||||  ||||| |||||||  | ||||||||    
T  29164963 ttctagagtcaggtgtgtcattacaacggctctgcagccgtccacctctataaataggggactcatagcagtccccaagg-tagaatctatctcttcctc 29164865  T
Q  326 tcaaaccctcactctctg 343  Q
    | ||||||||||||||||    
T  29164864 t-aaaccctcactctctg 29164848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 20093750 - 20093586
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||| ||||||||||||||||||||  |||||||||| | ||| |||||||||||| | |    | ||||||||||||||||| ||| ||||    
T  20093750 tgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacattcccgcaataagctctttggtggttacacttcccacgatttcgtaac 20093651  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    || ||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20093650 cgctagggccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 20093586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 128 - 340
Target Start/End: Original strand, 30770173 - 30770384
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||||| ||||||||||||||||| | ||||||||| | |||||||||||||||||| |    || ||||||||| |||||| ||| ||||    
T  30770173 tgcacggagcgaaagggactggttcaaacgaacac-aacgtctctctacacgttcccgcaataaactctttggcagttacactttccacgatttcgtaac 30770271  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    ||  ||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||  ||||| |||||||  | ||||||||    
T  30770272 cgccagagccaggtgtgccattacaacggctctgcagcactccacctctataaataggggactcacagcagtccccaagg-tagaatctatctcttcctc 30770370  T
Q  326 tcaaaccctcactct 340  Q
    | |||||||||||||    
T  30770371 t-aaaccctcactct 30770384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 293
Target Start/End: Original strand, 9548968 - 9549119
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    ||||||||||||||||||   |||||||||| | |||||||||||||||||| | |  ||||||||||||||||||| ||| |||||| |||||  ||||    
T  9548968 gagactggttcaaacgaaacacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggt 9549067  T
Q  242 gtgccattacaacggctctgcagccctccacctctataaataggggactcaa 293  Q
    |||||  |||||||||||||||||||||||||| |||||| |||||||||||    
T  9549068 gtgcctctacaacggctctgcagccctccacctttataaaaaggggactcaa 9549119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 128 - 342
Target Start/End: Complemental strand, 21802664 - 21802450
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||| |||||||||||| ||||||  |||||||||| | || |||| |||||||||| | |  || ||||||||||| |||| ||| ||||    
T  21802664 tgcacggagcgaaggagactggttcagacgaaccacaacgtctctctgcaggttctcgcaataaactctctcgctgttacacttcctacgatttcgtaac 21802565  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    |   ||||  |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||||  ||||| |||||||  | ||||||||    
T  21802564 caccagagccaggtgtgccattacaacggctctgtagccctcaacctctataaataggggactcacagcagtccccaagg-tagaatctatctcttcctc 21802466  T
Q  326 tcaaaccctcactctct 342  Q
    | |||||||||||||||    
T  21802465 t-aaaccctcactctct 21802450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 22705813 - 22705649
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||||| ||||||||||||  |||||| ||| | |||||||| ||||||||  | | | ||||||||||||||| || ||| ||||    
T  22705813 tgcacggagcgaaagagactagttcaaacgaaccacaacgtttctctgcacgttcctgcaataaattctctaccggttacacttcccatgatttcgtaac 22705714  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||  ||||  |||||||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  22705713 cgccagagccaggtgtgccattacaatggctctgcagtcctccacctctataaatacgggactca 22705649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 292
Target Start/End: Original strand, 2249992 - 2250141
Alignment:
Q  143 agactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtg 242  Q
    ||||||||||||||||||  |||||||||| | ||||||||||||||||   | | |||||||||| ||||||||| ||  ||||||  | ||   ||||    
T  2249992 agactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataatatctctagcggttacaattcccacgattttgtaaccgccaaagcctggtg 2250091  T
Q  243 tgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  2250092 tgccattacaacggctctgcaaccctccacctctatatataggggactca 2250141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 7595563 - 7595403
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  ||||| |||||||||||||  ||| |||||| | |||||||||||||||||| | |  ||||||||||||||||||| ||| ||||    
T  7595563 tgcacggagcgagcgagaccggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaac 7595464  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 288  Q
        || |  |||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  7595463 atccagcgccaggtgtgctattacaacggctttgcagccctccacctctataaatagggga 7595403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 238 - 342
Target Start/End: Complemental strand, 22704000 - 22703896
Alignment:
Q  238 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttct--tcctctcaaaccctc 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||  ||||| |||||||| |||  |||||| ||||||||    
T  22704000 aggtgtgccattacaacggctctgcagccctccacctctataaatatgggactcacagcagtccccaagg-tagaatctatctcgtcctct-aaaccctc 22703903  T
Q  336 actctct 342  Q
    |||||||    
T  22703902 actctct 22703896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 276
Target Start/End: Original strand, 30764982 - 30765114
Alignment:
Q  144 gactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgt 243  Q
    ||||||||||| |||||  ||| |||||||| ||| |||||||||| |   | |  ||||||||||||||||||| ||| || ||||  ||   ||||||    
T  30764982 gactggttcaagcgaaccacaatgtctctttgcacattcccgcaattatttctctggcggttacacttcccacgatttcgtacccgtcggacctaggtgt 30765081  T
Q  244 gccattacaacggctctgcagccctccacctct 276  Q
    |||| |||||| |||||||||||||||||||||    
T  30765082 gccactacaacagctctgcagccctccacctct 30765114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 28794085 - 28794176
Alignment:
Q  200 gcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    ||||||||||||||||||| ||| ||||||| |||   | ||||||||||||||||||| |||||||   ||||| |||| |||||||||||    
T  28794085 gcggttacacttcccacgatttcgtaaccgtcagacacacgtgtgccattacaacggctatgcagccactcacctttatatataggggactc 28794176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 148 - 279
Target Start/End: Complemental strand, 38612751 - 38612620
Alignment:
Q  148 ggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgcca 247  Q
    |||||||||||||  ||||||| || | ||||||||| |||||| | | |  || |||||||||||||||| ||  ||||||  ||||   ||||| |||    
T  38612751 ggttcaaacgaaccacaacgtccctctgcacgttcccacaataatctctctggcagttacacttcccacgattttgtaaccgccagagcctggtgtacca 38612652  T
Q  248 ttacaacggctctgcagccctccacctctata 279  Q
    |||||||||||||||||  |||||||||||||    
T  38612651 ttacaacggctctgcagatctccacctctata 38612620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 8e-83; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 20899582 - 20899796
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||    
T  20899582 tgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacacttcccacgatttcgtaac 20899681  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||  ||||||| ||||||||||||||||     
T  20899682 cgtcagagttaggtgtgccattacaacgaatctgcagccctccacctttataaataggggactcaatgcagtccccaaggtt-gaatctttcttcctcta 20899780  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  20899781 aaaccctcactctctg 20899796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 5590683 - 5590897
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | || ||||||||||||||||| | ||| ||||    
T  5590683 tgcacagaacgaaagagactggttcaaacgaaccccaacgtctctttccacattcccgcaataaactcgcaggcggttacacttcccacaatttcgtaac 5590782  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||||||    
T  5590783 cgtcagagtaaggtgtgccattacaacggctctgctgccctccacctctataaataggggattcaatgcagtccccaagg-tagaatctttcttcctctc 5590881  T
Q  328 aaaccctcactctctg 343  Q
    ||||||| ||||||||    
T  5590882 aaacccttactctctg 5590897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 23495562 - 23495348
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||| ||||    
T  23495562 tgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacagacggttacacttcccacgatttcgtaac 23495463  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| | |||||||| |||||||||     
T  23495462 cgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaatg-tagaatctctcttcctcta 23495364  T
Q  328 aaaccctcactctctg 343  Q
    ||||| ||||||||||    
T  23495363 aaaccttcactctctg 23495348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 36712635 - 36712849
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||  | || | |||||||||| |||||| ||| ||||    
T  36712635 tgcacggaacgaaagagactagttcaaacgaaccccaacgtctctttccacgttctcgcaataaaatcgcaggtggttacactttccacgatttcgtaac 36712734  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  36712735 cgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaagg-tagaatctttcttcctctc 36712833  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  36712834 aaaccctcactctctg 36712849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 128 - 336
Target Start/End: Original strand, 33622476 - 33622686
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||| ||||||||| |||| |||||||||||||||| || ||| ||||    
T  33622476 tgcacagaacgaaagagactggtttaaacgaaccccaacgtctctttctacgttccagcaataaactcacaggcggttacacttcccaggatttcgtaac 33622575  T
Q  228 c---gttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcct 324  Q
    |   || |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | | |||||| |||||||||    
T  33622576 caccgtcagagtaaggtgtgtaattacaacggctctgcagccctccacctctataaataggggactcaatgcagtc-cctaagatagaatatttcttcct 33622674  T
Q  325 ctcaaaccctca 336  Q
    ||||||||||||    
T  33622675 ctcaaaccctca 33622686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 28068009 - 28068224
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  ||||||||||||||||| |  |||||||||| | |||||||| ||||||||| | |  ||||||||||||||||||| ||| ||||    
T  28068009 tgcacggagcgagcgagactggttcaaacgagcctcaacgtctctctgcacgttcctgcaataaactctccggcggttacacttcccacgatttcgtaac 28068108  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaa--tctttcttcctc 325  Q
    ||  ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||   |||| |||||  ||| ||||||||    
T  28068109 cgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccctaagg-tagaatctctctcttcctc 28068207  T
Q  326 tcaaaccctcactctctg 343  Q
    | ||||||||||||||||    
T  28068208 t-aaaccctcactctctg 28068224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 5931404 - 5931240
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||| ||||||||||||||||||||  |||||||||| | ||| |||||||||||||| | |  |||||| |||||||||||| ||||||||    
T  5931404 tgcacggagcgatagagactggttcaaacgaaccacaacgtctctctacacattcccgcaataaactctctggcggttgcacttcccacgatttcataac 5931305  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||  |||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5931304 cgccagaaccaggtgtgtcattacaacggctctgcagccctccacctctataaataggggactca 5931240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 22510195 - 22510105
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacga 218  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  22510195 tgcacggaacgaaagagactggttaaaacgaactccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccacga 22510105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 142 - 292
Target Start/End: Complemental strand, 42792681 - 42792531
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    ||||| |||||||||||    |||||| ||| | |||||||||||||||||| | | |||||||||||||||||||| ||| ||||||  ||||  ||||    
T  42792681 gagaccggttcaaacgagtcacaacgtatctctgcacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggt 42792582  T
Q  242 gtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    |||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  42792581 gtgccactacaactgctctgcagccctccacctctataactaggggactca 42792531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 176 - 343
Target Start/End: Complemental strand, 38608433 - 38608266
Alignment:
Q  176 cacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctc 275  Q
    |||||||||||||||||| |    ||||||||||||||||||| ||| ||||||  ||||  |||||||||   |||||||||||| || ||||||||||    
T  38608433 cacgttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcctccacaacggctctgtagacctccacctc 38608334  T
Q  276 tataaataggggactcaatgcagtcatcaaggttagaatc-tttcttcctctcaaaccctcactctctg 343  Q
    |||||||||||||||||||||||||   |||| ||||||| ||||| ||||| ||||||||||||||||    
T  38608333 tataaataggggactcaatgcagtccctaagg-tagaatcttttctccctctaaaaccctcactctctg 38608266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 292
Target Start/End: Original strand, 15620191 - 15620341
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    ||||| ||||||||||| |  |||||||||| | ||||||||| |||||||| | |  ||||||||||||||||| | ||| ||||||| ||||  | ||    
T  15620191 gagacgggttcaaacgagccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacaatttcgtaaccgtcagagccaagt 15620290  T
Q  242 gtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  15620291 gtgccattacaacagctctacagcccttcacctctataaataggggactca 15620341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 128 - 342
Target Start/End: Complemental strand, 8244730 - 8244511
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||| ||||||||| |||||||| | | |||| |||||||| |||||| ||| ||||    
T  8244730 tgcacggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccccaataaactctctagcgattacactttccacgatttcgtaac 8244631  T
Q  228 cgttaga-----gtaa-ggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttc 319  Q
    ||  |||     |||| | |||||||| || ||| ||||||||||||||||||||||||||| ||||||||   ||||| |||||| |||||||  | ||    
T  8244630 cgccagagccatgtaatgatgtgccatcac-acgactctgcagccctccacctctataaataagggactcacatcagtcctcaagg-tagaatctatctc 8244533  T
Q  320 ttcctctcaaaccctcactctct 342  Q
    ||||||  |||||||||||||||    
T  8244532 ttcctc-aaaaccctcactctct 8244511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 13537940 - 13537860
Alignment:
Q  131 acggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacactt 211  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  13537940 acggaacgaaagagactggttcaaatgaaccccaacgtctctttccacgttcccgcaataaactcacagccggttacactt 13537860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 22922696 - 22922788
Alignment:
Q  200 gcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||||||||| ||| |||||| |||||  ||||||| || ||||||||||||| ||||||||||||||||||||||||||||||    
T  22922696 gcggttacacttcccacgatttcgtaaccgctagagccaggtgtgtcactacaacggctctgtagccctccacctctataaataggggactca 22922788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 282
Target Start/End: Original strand, 41037645 - 41037785
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    |||||||||||||| ||||   ||| ||| | | ||||||| |||||||||| | |  ||||||||||||||||||| ||| ||||||  ||||  ||||    
T  41037645 gagactggttcaaatgaacgataacatctgtctgcacgttcacgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggt 41037744  T
Q  242 gtgccattacaacggctctgcagccctccacctctataaat 282  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  41037745 gtgccattacaacggctccgcagccctccacctctataaat 41037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 22922099 - 22922191
Alignment:
Q  200 gcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||||||||| ||  |||||   ||||  ||||||| || ||||||||||||| ||||||||||||||||||||||||||||||    
T  22922099 gcggttacacttcccacgattttgtaaccaccagagccaggtgtgtcactacaacggctctgtagccctccacctctataaataggggactca 22922191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 19329961 - 19330052
Alignment:
Q  179 gttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctcc 270  Q
    ||||||||||||| | | |  ||||||||||||||||||| ||| ||||||  ||||   ||||||||||||||| ||||||| ||||||||    
T  19329961 gttcccgcaataatctctctggcggttacacttcccacgatttcgtaaccgccagagcttggtgtgccattacaatggctctgtagccctcc 19330052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 24095392 - 24095343
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataa 191  Q
    ||||| ||||||||| ||| ||||||||||||| ||||||||||||||||    
T  24095392 gagaccggttcaaacaaaccccaacgtctctttgcacgttcccgcaataa 24095343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 7336 - 7549
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||||||| |||| ||| |||     
T  7336 tgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacacttccaacgatttcgtaa- 7434  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||    
T  7435 cgtcagagtaaggtgtgccattacaacggctttgcagccctccacctctataaataggggactcaatgcaatccccaagg-tagaatctttcttcctctc 7533  T
Q  328 aaaccctcactctctg 343  Q
    |||||||||| |||||    
T  7534 aaaccctcaccctctg 7549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 140; Significance: 3e-73; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 15085 - 14871
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||    
T  15085 tgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttacacttcccacgatttcgtaac 14986  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||     
T  14985 cgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaataggggactcaatgcagtccccaagg-tagaatctttcttcctcta 14887  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  14886 aaaccctcactctctg 14871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 238 - 343
Target Start/End: Complemental strand, 17190 - 17086
Alignment:
Q  238 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctcaaaccctcac 337  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||| ||||||| ||    
T  17190 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaagg-tagaatctttcttcctctaaaacccttac 17092  T
Q  338 tctctg 343  Q
    ||||||    
T  17091 tctctg 17086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 17267 - 17197
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccaca 198  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  17267 tgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcaca 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 21817724 - 21817938
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||||||||| |||| || |||||||||||||||| ||| ||||    
T  21817724 tgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttacacttcccacgatttcgtaac 21817823  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||     
T  21817824 cgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaataggggactcaatgcagtccccaagg-tagaatctttcttcctcta 21817922  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  21817923 aaaccctcactctctg 21817938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 24973872 - 24974086
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||| ||||||||||||| |||||||||||||  ||||||||||||| || ||||| |||||||| |||| ||||||||||||||||||| ||| ||||    
T  24973872 tgcacagaacgaaagagaccggttcaaacgaacctcaacgtctctttcaacattcccacaataaactcacaggcggttacacttcccacgatttcgtaac 24973971  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||| |||||||||     
T  24973972 cgtcagagttaggtgtgccattacaacggctctgcagccctctaactctataaataggggactcaatgcagtcaccaagg-tagaatctctcttcctcta 24974070  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||||||||||    
T  24974071 aaaccctcactctctg 24974086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 343
Target Start/End: Original strand, 22186045 - 22186186
Alignment:
Q  201 cggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtc 300  Q
    |||||||||||||||||| ||  |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||    
T  22186045 cggttacacttcccacgattttgtaaccgtccgagtaaggtgtgccattacaacggctctgcagccatccacctctataaataggggacttaaagcagtc 22186144  T
Q  301 atcaaggttagaatctttcttcctctcaaaccctcactctctg 343  Q
      ||||| |||||||||||||||||||||||||||||||||||    
T  22186145 cccaagg-tagaatctttcttcctctcaaaccctcactctctg 22186186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 128 - 342
Target Start/End: Original strand, 19967404 - 19967618
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| | |||||||||||||||||| | |  ||||||||||  ||||||| ||| ||||    
T  19967404 tgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacaccacccacgatttcgtaac 19967503  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    ||  ||||  ||||||| ||||||||||| | |||| ||||||||||||||||||||||||||||| ||||||   |||| |||||||  | ||||||||    
T  19967504 cgccagagccaggtgtgtcattacaacggttatgcaaccctccacctctataaataggggactcaaagcagtccctaagg-tagaatccatctcttcctc 19967602  T
Q  326 tcaaaccctcactctct 342  Q
    | |||||||||||||||    
T  19967603 t-aaaccctcactctct 19967618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 132 - 342
Target Start/End: Original strand, 19442100 - 19442310
Alignment:
Q  132 cggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgtt 231  Q
    |||| |||||||||||||||||| |||||  |||||||||| | ||||||||| |||||||| | |  ||||||| ||||||| ||| ||| ||||||      
T  19442100 cggagcgaaagagactggttcaatcgaaccacaacgtctctctacacgttcccacaataaactctctggcggttatacttcccccgatttcgtaaccgcc 19442199  T
Q  232 agagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctctcaa 329  Q
    ||||| || |||| ||||||||||||| |||||| ||||||||||||||||||||||||||  ||||||  ||||| |||||||  | ||||||||| ||    
T  19442200 agagtcagatgtgtcattacaacggctttgcagcactccacctctataaataggggactcacagcagtccccaagg-tagaatctatctcttcctct-aa 19442297  T
Q  330 accctcactctct 342  Q
    |||||||||||||    
T  19442298 accctcactctct 19442310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 238 - 343
Target Start/End: Original strand, 21815619 - 21815723
Alignment:
Q  238 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctcaaaccctcac 337  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||| ||||||| ||    
T  21815619 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaagg-tagaatctttcttcctctaaaacccttac 21815717  T
Q  338 tctctg 343  Q
    ||||||    
T  21815718 tctctg 21815723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 343
Target Start/End: Original strand, 8990822 - 8990962
Alignment:
Q  203 gttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcat 302  Q
    |||||||||||||||| ||| |||||| |||||  ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||      
T  8990822 gttacacttcccacgatttcgtaaccgctagagccaggtgtgccattacaacggctctacagccctccacctctgtaaataggggactcactgcagtccc 8990921  T
Q  303 caaggttagaatct--ttcttcctctcaaaccctcactctctg 343  Q
    || || ||||||||   ||||||||| ||||||||||||||||    
T  8990922 cacgg-tagaatctaactcttcctct-aaaccctcactctctg 8990962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 142 - 292
Target Start/End: Complemental strand, 9859171 - 9859017
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagt-aag- 239  Q
    |||||| ||||||||||||  |||||||||| | |||||||||||||||||| |    ||||||||||||||||||| ||| ||||||| ||||  |||     
T  9859171 gagactcgttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgtcagagccaagt 9859072  T
Q  240 --gtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
      |||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  9859071 gtgtgtgcaaccacaacggctctgcagccctccacctctataaataggggactca 9859017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 297
Target Start/End: Original strand, 8995459 - 8995592
Alignment:
Q  163 caacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgc 262  Q
    ||||||||||   |||||||||||||||||| |    ||||||||||||||||||| ||| |||||| |||||  ||||||| || | ||||||||||||    
T  8995459 caacgtctctcagcacgttcccgcaataaactctatggcggttacacttcccacgatttcgtaaccgctagagctaggtgtgtcaat-caacggctctgc 8995557  T
Q  263 agccctccacctctataaataggggactcaatgca 297  Q
    |||||||||||||||||||||||||||||| ||||    
T  8995558 agccctccacctctataaataggggactcactgca 8995592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 198
Target Start/End: Original strand, 21815542 - 21815612
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccaca 198  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  21815542 tgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcaca 21815612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 49472417 - 49472309
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||| |||| ||||||| |||  | |||| ||| ||||    
T  49472417 tgcacggaacgaaagagaccggttcaaatgaaccccaacgtctctttccacgttcccgcaataaactcacatgcggttatact--ctacgatttcgtaac 49472320  T
Q  228 cgttagagtaa 238  Q
    ||| |||||||    
T  49472319 cgtcagagtaa 49472309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 148 - 300
Target Start/End: Complemental strand, 38621997 - 38621845
Alignment:
Q  148 ggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgcca 247  Q
    |||| ||||||||  |||||||||| | |||||||||||||||||       || ||||||||| |||||| ||| |||||   ||||  |  |||||||    
T  38621997 ggttaaaacgaaccacaacgtctctctgcacgttcccgcaataaattgtttggcagttacactttccacgatttcgtaaccaccagagccaaatgtgcca 38621898  T
Q  248 ttacaacggctctgcagccctccacctctataaataggggactcaatgcagtc 300  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  38621897 ttacaacggctctgcagccctccacctctatatataagggactcactgcagtc 38621845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 7e-71; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 25820930 - 25820716
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||| ||||||||  || | ||||||||||| |||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||| ||| ||||    
T  25820930 tgcacgaaacgaaaggaaccgattcaaacgaaccccaacgtctctttccacgttccagcaataaactcacaggcggttacacttcccacgatttcgtaac 25820831  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  || || |||||||||||||||||||    
T  25820830 cgtcagagtaaggtgtgccattacaacggctttgcagccctccacctctaaaaataggggactcaatgcagtccccatgg-tagaatctttcttcctctc 25820732  T
Q  328 aaaccctcactctctg 343  Q
    ||||||| ||||||||    
T  25820731 aaacccttactctctg 25820716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 128 - 293
Target Start/End: Original strand, 18040467 - 18040632
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| | |||||||||||||||||| |    ||||||||||||||||||| ||| ||||    
T  18040467 tgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgatttcgtaac 18040566  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaa 293  Q
    ||| ||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18040567 cgtcagagccaggtgtgccattacaacggctctgcagctctccacctctataaataggggactcaa 18040632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 128 - 293
Target Start/End: Original strand, 32008999 - 32009164
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||||||||||||||||||  || ||||||| | |||||||||||||||| | | | |||| ||||||||||||||| ||| ||||    
T  32008999 tgcacggagcgaaagagactggttcaaacgaaccacagcgtctctctgcacgttcccgcaataatctctctagcgattacacttcccacgatttcgtaac 32009098  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaa 293  Q
    ||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32009099 cgccagagtcaggtgtgccattacaacggctctacagccctccacctctataaataggggactcaa 32009164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 139 - 293
Target Start/End: Original strand, 18574014 - 18574168
Alignment:
Q  139 aaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaa 238  Q
    ||||||| ||||||||||||||  |||||||||| | ||||||||| |||||||| | |  ||||||||||||||||||| ||| ||||||  ||||  |    
T  18574014 aaagagagtggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacgatttcgtaaccgccagagcca 18574113  T
Q  239 ggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaa 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18574114 ggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaa 18574168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 130 - 342
Target Start/End: Original strand, 2085730 - 2085942
Alignment:
Q  130 cacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccg 229  Q
    |||||| ||||||||||| ||||||||||||  ||| |||||| | || |||||||||||||||   |  ||  ||||||||||||||| ||| ||||||    
T  2085730 cacggagcgaaagagactagttcaaacgaaccacaatgtctctctgcatgttcccgcaataaacgacctggcaattacacttcccacgatttcgtaaccg 2085829  T
Q  230 ttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctctc 327  Q
      ||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||  | |||||||||     
T  2085830 ccagagccaggtgtgccattacaacggttctgcagccctccacctctataaataggggactcaatgcagtccccaagg-tagaatctatctcttcctct- 2085927  T
Q  328 aaaccctcactctct 342  Q
    |||||||||||||||    
T  2085928 aaaccctcactctct 2085942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 10532801 - 10532947
Alignment:
Q  154 aacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaa 253  Q
    |||||||  |||||||||| |||||||||| ||||||||| | |  |||||||||||| |||||| ||| ||||||  ||||| ||||||||||||||||    
T  10532801 aacgaaccacaacgtctctctccacgttcctgcaataaacaccctggcggttacactttccacgatttcgtaaccgccagagtcaggtgtgccattacaa 10532900  T
Q  254 cggctctgcagccctccacctctataaataggggactcaatgcagtc 300  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  10532901 cggctctgcagccctccacctctataaataggggacttaatggagtc 10532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 7999862 - 7999649
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||| |||||||||||| |||||||  |||||||||| | || ||||||||||||||| | |  ||||||||||||||||||| ||| ||||    
T  7999862 tgcacggagcgacagagactggttccaacgaaccacaacgtctctctgcatgttcccgcaataaactctctggcggttacacttcccacgatttcgtaac 7999763  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    ||  ||||  ||||||| |||||||||||  |||||| |||||||||||||||| ||| ||||||  ||||||  ||||| |||||||  | ||||||||    
T  7999762 cgccagagccaggtgtgtcattacaacgg--ctgcagtcctccacctctataaacaggagactcacggcagtccccaagg-tagaatctatctcttcctc 7999666  T
Q  326 tcaaaccctcactctctg 343  Q
    | ||||||||||||||||    
T  7999665 t-aaaccctcactctctg 7999649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 7454652 - 7454867
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  ||||| |||||| |||| |  |||||||||| | ||||||||| |||||||| |     |||||||||||||||||| ||| ||||    
T  7454652 tgcacggagcgagcgagaccggttcatacgagccacaacgtctctatgcacgttcccacaataaactctatgacggttacacttcccacgatttcgtaac 7454751  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    ||  ||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||  ||| |||||||||  | |||||||     
T  7454752 cgccagagccaggtgtgccattacaacggctctgcagccttccacctctataaataggggactcatagcagtccccaa-gttagaatctatctcttcctg 7454850  T
Q  326 tcaaaccctcactctctg 343  Q
    | ||||||||||||||||    
T  7454851 t-aaaccctcactctctg 7454867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 143 - 292
Target Start/End: Original strand, 41280811 - 41280959
Alignment:
Q  143 agactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtg 242  Q
    |||| ||||||||||| |  ||||| |||| | |||||||||||||||||| | |  ||||||||||||||||||| ||  |||||   ||||| |||||    
T  41280811 agaccggttcaaacgagccacaacg-ctctctgcacgttcccgcaataaactctctggcggttacacttcccacgattttgtaacccccagagtcaggtg 41280909  T
Q  243 tgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41280910 tgccattacaacggctctgcagtcctccacctctataaataggggactca 41280959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 260 - 343
Target Start/End: Complemental strand, 1788732 - 1788650
Alignment:
Q  260 tgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctcaaaccctcactctctg 343  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  1788732 tgcagccctccacctctataaataggagactcaatgcagtcaccaagg-tagaatctttcttcctctcaaaccctcactctctg 1788650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 142 - 274
Target Start/End: Complemental strand, 24033965 - 24033833
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    |||||||||||||||||||  ||| |||||| | |||||||||||||||||| | |  |||||||||||| |||||| ||| ||||||  | ||| | ||    
T  24033965 gagactggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacactttccacgatttcgtaaccgccaaagtcaagt 24033866  T
Q  242 gtgccattacaacggctctgcagccctccacct 274  Q
    |||||||||||||||||||||| ||||||||||    
T  24033865 gtgccattacaacggctctgcaaccctccacct 24033833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 291
Target Start/End: Complemental strand, 11709562 - 11709419
Alignment:
Q  148 ggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgcca 247  Q
    |||||||||||||  |||||||||| | ||||||||| |||||| | | |  ||||||||||||||||||| ||| |||  |  ||||   |||||||||    
T  11709562 ggttcaaacgaaccacaacgtctctctgcacgttcccacaataatctctctggcggttacacttcccacgatttcgtaaatgccagagcctggtgtgcca 11709463  T
Q  248 ttacaacggctctgcagccctccacctctataaataggggactc 291  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  11709462 ttacaacggctctgcaaccctccacctctatatataggggactc 11709419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 33273604 - 33273656
Alignment:
Q  240 gtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33273604 gtgtgccattacaacggctctgcaaccctccacctctataaataggggactca 33273656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 239 - 291
Target Start/End: Complemental strand, 24060661 - 24060609
Alignment:
Q  239 ggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    |||||||||| |||||||||||||||||||||||||||||| ||| |||||||    
T  24060661 ggtgtgccatcacaacggctctgcagccctccacctctatatataagggactc 24060609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 10532735 - 10532791
Alignment:
Q  137 cgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaac 193  Q
    ||||||||| ||||||||||||||  |||||||||| |||||||||| |||||||||    
T  10532735 cgaaagagattggttcaaacgaaccacaacgtctctctccacgttcctgcaataaac 10532791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 10858 - 11072
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||| |||||||||||||| |||||||| |||  |||||||||||||||| ||||||||||||||| |||| |||||||||||||||| || ||| ||||    
T  10858 tgcaaggaacgaaagagaccggttcaaaagaaacccaacgtctctttccatgttcccgcaataaactcacaggcggttacacttcccatgatttcgtaac 10957  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc 327  Q
    ||| ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||  |||||  |||||||||||||||||     
T  10958 cgtcagagttaggtgtgccattacaacggctctacagccctccacctttataaatagtggactcaatggagtccccaagg-gagaatctttcttcctcta 11056  T
Q  328 aaaccctcactctctg 343  Q
    ||||||||| ||||||    
T  11057 aaaccctcattctctg 11072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 129 - 300
Target Start/End: Original strand, 54590 - 54761
Alignment:
Q  129 gcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataacc 228  Q
    |||||||||||| ||||||||||||||||||  ||||||||||| |||||||||||||||||||| |||| | |||||||||||||| || ||| |||||    
T  54590 gcacggaacgaaggagactggttcaaacgaaacccaacgtctctctccacgttcccgcaataaactcacaggtggttacacttcccatgatttcgtaacc 54689  T
Q  229 gttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtc 300  Q
    || |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54690 gtcagagtaaggtgtaccattacaacggctatgcagccctccacctctataaataggggactcaatgcagtc 54761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 9e-55; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 135 - 343
Target Start/End: Complemental strand, 27347376 - 27347170
Alignment:
Q  135 aacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttaga 234  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || | || ||||||||||||| || ||| ||||||| ||     
T  27347376 aacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcataggcagttacacttcccatgatttcgtaaccgtcagt 27347277  T
Q  235 gtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctcaaaccct 334  Q
    || ||||||||||||||||||||| || |||||||||| |||||| |||||||| |||||||||||  ||||| |||||||| ||||||||  ||||| |    
T  27347276 gttaggtgtgccattacaacggctttgtagccctccacgtctatacataggggattcaatgcagtccccaagg-tagaatctctcttcctc-aaaaccat 27347179  T
Q  335 cactctctg 343  Q
    |||||||||    
T  27347178 cactctctg 27347170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 144 - 342
Target Start/End: Original strand, 41266197 - 41266396
Alignment:
Q  144 gactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgt 243  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||||| | |  ||||||||||||| |||||  || ||||||  ||||  ||||||    
T  41266197 gactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctcgggcggttacacttctcacgatatcgtaaccgccagagccaggtgt 41266296  T
Q  244 gccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctctcaaaccctcactctc 341  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||  ||||| |||||||  | ||||||||| ||||||||||||||    
T  41266297 gccattacaacggctctgcagccctccacctctataaataggggactcacagcagtccccaagg-tagaatctatctcttcctctaaaaccctcactctc 41266395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 142 - 292
Target Start/End: Original strand, 25133933 - 25134083
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||||| | |  |||||||||||| |||||| ||| ||||||  ||||  ||||    
T  25133933 gagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacacttaccacgatttcgtaaccgccagagccaggt 25134032  T
Q  242 gtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25134033 gtgccactacaacggctctgcagccctccacctctataaataggggactca 25134083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 128 - 342
Target Start/End: Original strand, 23755804 - 23756018
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||||| |||||||||||| ||||  |||||||||| | |||||||||||||||||| |    ||||||||||||||||||| ||| ||||    
T  23755804 tgcacggagcgaaagtgactggttcaaaagaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacgatttcgtaac 23755903  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    || |||||  ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||   |||||  ||||| |||||||  | ||||||||    
T  23755904 cgctagagccaggtgtgccattacaacggctctacagccttccacctctataaataggggactcacaacagtccccaagg-tagaatctatctcttcctc 23756002  T
Q  326 tcaaaccctcactctct 342  Q
    | |||||||||||||||    
T  23756003 t-aaaccctcactctct 23756018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 128 - 288
Target Start/End: Complemental strand, 3770474 - 3770314
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||| ||| ||| ||||||||||||||||||||  |||||||||| | |||||| ||||||||||| | | ||||||||||||| |||||| ||  ||||    
T  3770474 tgcatggagcgagagagactggttcaaacgaacctcaacgtctctctgcacgtttccgcaataaactctctagcggttacactttccacgattttgtaac 3770375  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 288  Q
    ||  ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3770374 cgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 3770314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 42534129 - 42534272
Alignment:
Q  149 gttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccat 248  Q
    |||||||||| |  |||||||||| | |||||||||||||||||| | |  ||||||||||||||||||| ||| ||||||  ||||  || ||||||||    
T  42534129 gttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagatgtgccat 42534228  T
Q  249 tacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  42534229 tacaacggctctgcagccctccacctctataaataggggactca 42534272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 142 - 343
Target Start/End: Complemental strand, 3105404 - 3105203
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    ||||| ||||||||||| |  |||||||||| | |||||||||||||||||| | |  ||||||||||||||||||| ||||||||| | ||||| ||||    
T  3105404 gagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcataaccatgagagttaggt 3105305  T
Q  242 gtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatct--ttcttcctctcaaaccctcactc 339  Q
    ||| ||||||||||||||| ||  |||||||||||||||||| ||||||||  ||||||  ||||| ||||||||   ||||||||| ||| ||||||||    
T  3105304 gtgtcattacaacggctctacaatcctccacctctataaatatgggactcatagcagtccccaagg-tagaatctaactcttcctct-aaaacctcactc 3105207  T
Q  340 tctg 343  Q
    ||||    
T  3105206 tctg 3105203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 128 - 291
Target Start/End: Original strand, 26154968 - 26155131
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||| | ||||||||||||  |||| |||||||  ||||||||||||||||| | |  ||||||||||||||||||| ||| ||||    
T  26154968 tgcacggagcgaaagagattagttcaaacgaaccacaacatctctttgtacgttcccgcaataaacgctctggcggttacacttcccacgatttcgtaac 26155067  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    |   | ||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  26155068 caccatagccaggtgtgccattataacggctatgcagccctccacctctataaataggggactc 26155131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 23930011 - 23929796
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  ||||| |||||||| ||||  ||| |||||| | ||||||||| |||||||| | |  ||||||||||||||||||| | | ||||    
T  23930011 tgcacggagcgagcgagaccggttcaaatgaaccacaatgtctctctgcacgttcccacaataaactctccggcggttacacttcccacgattccgtaac 23929912  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatct--ttcttcctc 325  Q
    ||  ||||  ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||  ||||| || |||||   ||||||||    
T  23929911 cgccagagccaggtgtgccattacaacggctctgcagccctccacctctttatataggggactcactgcagtccccaagg-taaaatctaactcttcctc 23929813  T
Q  326 tcaaaccctcactctctg 343  Q
    | ||||||||||||||||    
T  23929812 t-aaaccctcactctctg 23929796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 19092935 - 19092771
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||  ||||| ||||||||||||  |||||||||| | |||||||||||||||| | | |  ||||||||||||||||| | |||  |||    
T  19092935 tgcacggagcgaacaagactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataatctctctggcggttacacttcccacaagttcgaaac 19092836  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||  |||||  |||||| |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  19092835 cgcgagagtctggtgtgtcattacaacggctctgcagccccccacctctatatataggggactca 19092771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 29568507 - 29568365
Alignment:
Q  149 gttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccat 248  Q
    |||||||||| |  |||||||||| | |||||||| ||||||||| | | |||||||||||||||||||| ||| ||||||  ||||  |||||| ||||    
T  29568507 gttcaaacgagccacaacgtctctctacacgttcc-gcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggtgtaccat 29568409  T
Q  249 tacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||| |||||||||||||||||||| |||||||||    
T  29568408 tacaacggctctgtagccctccacctctataaattggggactca 29568365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 342
Target Start/End: Original strand, 26159154 - 26159233
Alignment:
Q  263 agccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctctcaaaccctcactctct 342  Q
    ||||||||||||||||||||||||||||||| |||||   ||||| |||||||  | ||||||||| |||||||||||||||    
T  26159154 agccctccacctctataaataggggactcaaagcagttcccaagg-tagaatctatctcttcctct-aaaccctcactctct 26159233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 22452917 - 22452968
Alignment:
Q  240 gtgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    |||||||||||||| ||||||||||||  |||||||||||  ||||||||||    
T  22452917 gtgtgccattacaatggctctgcagccacccacctctatatttaggggactc 22452968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 128 - 342
Target Start/End: Original strand, 47401 - 47615
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| | |||||||||||||||||| | |  ||||||||||||||||| | ||  ||||    
T  47401 tgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacaattttgtaac 47500  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    ||  ||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| |||||||  | ||||||||    
T  47501 cgccagagccaagtgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcagtccccaagg-tagaatctatctcttcctc 47599  T
Q  326 tcaaaccctcactctct 342  Q
    | |||||||||||||||    
T  47600 t-aaaccctcactctct 47615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 128 - 342
Target Start/End: Original strand, 1507 - 1721
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||||||||||||||||||  |||| ||||| | |||||||||||||||||| | |  ||||||||||||| ||||| || |||||    
T  1507 tgcacggagcgaaagagactggttcaaacgaaccacaacatctctctacacgttcccgcaataaactctctggcggttacacttctcacgattttataac 1606  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
     | |||||  ||||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||| ||||||  ||||| |||||||  | ||||||||    
T  1607 tgctagagccaggtgtgccattacaacagctctacagccgtccacctctataaatagggcactcaaagcagtccccaagg-tagaatctatctcttcctc 1705  T
Q  326 tcaaaccctcactctct 342  Q
    | |||||||||||||||    
T  1706 t-aaaccctcactctct 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 142 - 292
Target Start/End: Complemental strand, 68873 - 68723
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    |||||| |||||||||| |  ||||||||||| ||||||||||||||||||| | | |||||||||||||||||||| ||| ||||||  | || |||||    
T  68873 gagactagttcaaacgagccacaacgtctcttcccacgttcccgcaataaactctctagcggttacacttcccacgatttcgtaaccgccaaagcaaggt 68774  T
Q  242 gtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  68773 gtgtcattacaacggctttgcagccctccacctctataaataggggactca 68723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 142 - 292
Target Start/End: Complemental strand, 75045 - 74895
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    ||||||||||||||||| |  |||||| |||   |||||||||||||||||| | |  |||||||||||||| |||| |||||||| |  ||||  ||||    
T  75045 gagactggttcaaacgagccacaacgtgtctccgcacgttcccgcaataaactctctggcggttacacttccgacgatttcataactgccagagccaggt 74946  T
Q  242 gtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  74945 gtgccattacaacggctctacagccctccacctctataaataggggactca 74895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 128 - 300
Target Start/End: Original strand, 16301 - 16473
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||| |||||||||||||||||||  |||| ||||| | |||||||||||||||||| | |  | ||||||||||||||||| ||  ||||    
T  16301 tgcacggagcgaatgagactggttcaaacgaaccacaacatctctctgcacgttcccgcaataaactctctggtggttacacttcccacgattttgtaac 16400  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtc 300  Q
    ||  ||||  |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  16401 cgccagagccaggtgtaccattacaatggctctgcagccctccacctctataaataggggactcaaagcagtc 16473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 83; Significance: 3e-39; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 391673 - 391458
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  |||||| ||||||||||||  |||||||||| | || ||||||||||||||| | |  ||||||||||||||||  | ||| ||||    
T  391673 tgcacggagcgagcgagactagttcaaacgaaccacaacgtctctctgcaggttcccgcaataaactctctggcggttacacttcccataatttcgtaac 391574  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    ||  ||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||  ||||| |||||||  | ||||||||    
T  391573 cgccagagccaggtgtgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtccccaagg-tagaatctatctcttcctc 391475  T
Q  326 tcaaaccctcactctctg 343  Q
    | ||||||||||||||||    
T  391474 t-aaaccctcactctctg 391458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 128 - 292
Target Start/End: Complemental strand, 380975 - 380811
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  |||||||||||||||||||  |||||||||| | |||||||||||||||||  | |  ||||||||||||| ||| | ||| ||||    
T  380975 tgcacggagcgagcgagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaagtctctggcggttacacttctcacaatttcgtaac 380876  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    |   ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  380875 ctccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 380811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 128 - 271
Target Start/End: Complemental strand, 19790489 - 19790346
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    ||||| || ||||||||||||||||||||||||  |||||||||| | ||||||||| |||||||| | |   |||||||||||||||||| ||| ||||    
T  19790489 tgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctgacggttacacttcccacgatttcgtaac 19790390  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctcca 271  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||    
T  19790389 cgtcagagtcaggtgtgccattacaacggctctgcagccctcca 19790346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 22915266 - 22915051
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  |||||| |||||||||||   |||||||||| | |||||||||||||||||| | | ||| |||||||||||||||| ||||||||    
T  22915266 tgcacggagcgagcgagactagttcaaacgaatcacaacgtctctcttcacgttcccgcaataaactctctagctgttacacttcccacgatttcataac 22915167  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctc 325  Q
    ||   |||  | |||| ||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||  ||||| |||||||  | ||||||||    
T  22915166 cgccggagccaagtgtaccattacaacggctctgcagctctccacctttataaataggggactcatagcagtccccaagg-tagaatctatctcttcctc 22915068  T
Q  326 tcaaaccctcactctctg 343  Q
    | ||||||||||||||||    
T  22915067 t-aaaccctcactctctg 22915051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 16853029 - 16853166
Alignment:
Q  163 caacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgc 262  Q
    |||||||||| | |||||| ||||||||||| | |  ||||||||||||||||||| ||| ||||||  ||||  |||||||||||||||||   | |||    
T  16853029 caacgtctctctgcacgttaccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacatatttgc 16853128  T
Q  263 agccctccacctctataaataggggactcaatgcagtc 300  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16853129 agccctccacctctataaataggggactcaatgcagtc 16853166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 284
Target Start/End: Complemental strand, 16914900 - 16914764
Alignment:
Q  148 ggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgcca 247  Q
    ||||||||||| |  |||||||||||| |||||||||||||| |   | | |  |||||||| |||||||| ||| ||||||  |||   |  |||||||    
T  16914900 ggttcaaacgagccgcaacgtctctttgcacgttcccgcaattatttctctactggttacacctcccacgatttcgtaaccgccagaccgatctgtgcca 16914801  T
Q  248 ttacaacggctctgcagccctccacctctataaatag 284  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  16914800 ttacaatggctctgcagccctccacctctatatatag 16914764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 266
Target Start/End: Complemental strand, 44635947 - 44635823
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggt 241  Q
    |||||| ||||||||||||| |||||||||||  ||||||||||| |    | | |  ||||||||||||||||||| ||| ||||||   || | | ||    
T  44635947 gagactagttcaaacgaactacaacgtctcttcgcacgttcccgcgaatctctctctggcggttacacttcccacgatttcgtaaccgacggactcacgt 44635848  T
Q  242 gtgccattacaacggctctgcagcc 266  Q
    |||||||||||||||||||||||||    
T  44635847 gtgccattacaacggctctgcagcc 44635823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 22006590 - 22006543
Alignment:
Q  244 gccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  22006590 gccattacaacgactctgcagccctccacctctatatataagggactc 22006543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 22014107 - 22014060
Alignment:
Q  244 gccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||||||    
T  22014107 gccattacaacgactctgcagccctccacctctatatataagggactc 22014060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 342
Target Start/End: Complemental strand, 1998087 - 1998006
Alignment:
Q  261 gcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatctttcttcctctc-aaaccctcactctct 342  Q
    ||||| |||||||||||||||||||| |||||| ||||||  ||||| |||||||| |||   |||| |||||||||||||||    
T  1998087 gcagctctccacctctataaatagggtactcaaagcagtccccaagg-tagaatctgtctctgtctctaaaccctcactctct 1998006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 291
Target Start/End: Original strand, 3559221 - 3559267
Alignment:
Q  245 ccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    ||||||||||||||||||||||  ||| ||||||| |||||||||||    
T  3559221 ccattacaacggctctgcagccacccatctctatatataggggactc 3559267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 36639696 - 36639651
Alignment:
Q  240 gtgtgccattacaacggctctgcagccctccacctctataaatagg 285  Q
    ||||||||||||||||||||||||  |  |||||||||||||||||    
T  36639696 gtgtgccattacaacggctctgcattcacccacctctataaatagg 36639651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 132 - 292
Target Start/End: Complemental strand, 1819 - 1658
Alignment:
Q  132 cggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacc-cacaagcggttacacttcccacgaattcataaccgt 230  Q
    |||| ||||||||| ||||||||||||||  |||||||||| | ||||||||||||||||| | | |  ||||||||||||||||||| ||| ||||||     
T  1819 cggagcgaaagagattggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaaactctctggcggttacacttcccacgatttcgtaaccgc 1720  T
Q  231 tagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
     ||||  | || |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1719 cagagccaagtatgccattacaacggctctgcagccatccacctctataaataggggactca 1658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 292
Target Start/End: Complemental strand, 15507 - 15415
Alignment:
Q  200 gcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    ||||||||||||||||||| ||  ||||||  ||||| |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15507 gcggttacacttcccacgatttagtaaccgccagagtcaggcatgccattgcaacggctctgcagccctccacctctataaataggggactca 15415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 128 - 292
Target Start/End: Original strand, 30043 - 30207
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| | |||||||||||||||||  | |  | ||||||||||||||| | ||| ||||    
T  30043 tgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaaatctctggaggttacacttcccacaatttcgtaac 30142  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    |   ||||  |||||| || |||||| ||||||||||||||||||||||||||||| ||||||||    
T  30143 caccagagccaggtgttccgttacaatggctctgcagccctccacctctataaatacgggactca 30207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 128 - 292
Target Start/End: Original strand, 1026 - 1190
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  |||||||||||||||||||  |||||| ||| | || ||||| ||||||||| |    ||||||||||||||||||| ||| |||     
T  1026 tgcacggagcgagcgagactggttcaaacgaaccacaacgtttctctgcatgttcctgcaataaactctatggcggttacacttcccacgatttcgtaat 1125  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    || |||||  |||||| |||||||||||||| || ||||||||||||||||||||||||||||||    
T  1126 cgctagagccaggtgttccattacaacggctatgtagccctccacctctataaataggggactca 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 143 - 284
Target Start/End: Complemental strand, 242872 - 242731
Alignment:
Q  143 agactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtg 242  Q
    |||| |||||||||||||  |||||||||||| |||||||||||||||||| |    || |||||||||||||||| | | ||||||  ||||  |||||    
T  242872 agaccggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctttggcagttacacttcccacgattacgtaaccgcaagagccaggtg 242773  T
Q  243 tgccattacaacggctctgcagccctccacctctataaatag 284  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  242772 tgccattacaacggctctgccgccctccacctctatatatag 242731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 343
Target Start/End: Complemental strand, 253512 - 253312
Alignment:
Q  143 agactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtg 242  Q
    |||| |||||||| ||||  |||| ||||| | |||||||||||||||||| | |  || |||||||||||||||| ||| ||||||  ||||  |||||    
T  253512 agaccggttcaaatgaaccacaacatctctctgcacgttcccgcaataaactctctggcagttacacttcccacgatttcgtaaccgccagagccaggtg 253413  T
Q  243 tgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatct--ttcttcctctcaaaccctcactct 340  Q
    ||||||||||||| || ||||||| ||||||| |||| |||||||||||| | |||||  ||||| ||||||||   ||||||||| ||||| |||||||    
T  253412 tgccattacaacgactttgcagccgtccacctttatatataggggactcactacagtccccaagg-tagaatctaactcttcctct-aaaccgtcactct 253315  T
Q  341 ctg 343  Q
    |||    
T  253314 ctg 253312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 148 - 292
Target Start/End: Original strand, 4202 - 4346
Alignment:
Q  148 ggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgcca 247  Q
    |||||||||||||  |||||||| | | ||||||| |||||||||| | |  || ||||||| |||||||| ||| |||||   ||||  ||||||||||    
T  4202 ggttcaaacgaaccacaacgtctatctgcacgttctcgcaataaactctctcgcagttacacatcccacgatttcgtaaccaccagagccaggtgtgcca 4301  T
Q  248 ttacaacggctctgcagccctccacctctataaataggggactca 292  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  4302 ctacaacggctctgcagccctccacctctataaataggggactca 4346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 128 - 292
Target Start/End: Original strand, 151277 - 151440
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| |||  ||||| | |||||||||||  |||||||||| |  ||||||| ||||||||| | |  ||| || |||||||||||| ||| ||||    
T  151277 tgcacggagcgagcgagaccgattcaaacgaaccacaacgtctctctgtacgttcctgcaataaactctctggcgttt-cacttcccacgatttcgtaac 151375  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    || |||||  |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  151376 cgctagagccaggtcttccactacaacggctctgcagccctccacctctataaataggggactca 151440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 176 - 292
Target Start/End: Complemental strand, 12489 - 12373
Alignment:
Q  176 cacgttcccgcaataaacccacaagcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctc 275  Q
    |||||||||||||||| | | | ||||||||||||||||| || ||  ||||||  ||||   |||||||||||||||||||||||||||||| ||||||    
T  12489 cacgttcccgcaataatctctctagcggttacacttcccatgattttgtaaccgccagagcctggtgtgccattacaacggctctgcagcccttcacctc 12390  T
Q  276 tataaataggggactca 292  Q
    |||| ||||||||||||    
T  12389 tatatataggggactca 12373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 37283 - 37374
Alignment:
Q  200 gcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    ||||||||||||||||||| ||||||||||  ||||   || ||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  37283 gcggttacacttcccacgatttcataaccgccagagcctggcgtgccatcacaacggctctgcagccctccacctctatatataggggactc 37374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 286
Target Start/End: Original strand, 2816 - 2974
Alignment:
Q  128 tgcacggaacgaaagagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattcataac 227  Q
    |||||||| ||||  |||| ||||||||||||   ||| |||||| | |||||||| | ||||| | | | |||||||||||||||||||| ||| ||||    
T  2816 tgcacggagcgaacaagaccggttcaaacgaaacacaatgtctctctgcacgttccagtaataatctctctagcggttacacttcccacgatttcgtaac 2915  T
Q  228 cgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggg 286  Q
    ||  ||||   |||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  2916 cgccagagcctggtgtgccattacaacagctctgcagctctccacctctatatataggg 2974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 342
Target Start/End: Complemental strand, 19254 - 19150
Alignment:
Q  238 aggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcatcaaggttagaatc--tttcttcctctcaaaccctc 335  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||  | ||||||||| ||| ||||    
T  19254 aggtgtgccgttacaatggctctgcagccctccacctctataaataggggactcactgcagtccccaagg-tagaatctatctcttcctct-aaatcctc 19157  T
Q  336 actctct 342  Q
    |||||||    
T  19156 actctct 19150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 20341 - 20433
Alignment:
Q  199 agcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    |||||||||||||||||| | ||  |||||| | ||   | |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  20341 agcggttacacttcccacaattttgtaaccgcttgacccaagtgtaccattacaacggctctgcagccctccacctctaaaaataggggactc 20433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 291
Target Start/End: Original strand, 49284 - 49375
Alignment:
Q  200 gcggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    ||||||||||||||||||| ||| ||||| || ||   |  ||||||||||||||||||||||| ||  ||||||||||| |||||||||||    
T  49284 gcggttacacttcccacgatttcgtaaccattggacacacatgtgccattacaacggctctgcatccacccacctctatatataggggactc 49375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 36839 - 36928
Alignment:
Q  202 ggttacacttcccacgaattcataaccgttagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactc 291  Q
    ||||||||||||||| | ||| |||||||  ||   | ||||||||||||||||||||| |||||  ||||||||||| |||||||||||    
T  36839 ggttacacttcccacaatttcgtaaccgtcggacacacgtgtgccattacaacggctctacagccacccacctctatatataggggactc 36928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 9335 - 9247
Alignment:
Q  142 gagactggttcaaacgaactccaacgtctctttccacgttcccgcaataaacccacaagcgg-ttacacttcccacgaattcataaccg 229  Q
    |||||||||||||||||||  |||||||||| | |||||||| ||||||||| | | ||||| ||||||||||||| | ||| ||||||    
T  9335 gagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctagcggtttacacttcccacaatttcgtaaccg 9247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 86460 - 86512
Alignment:
Q  240 gtgtgccattacaacggctctgcagccctccacctctataaataggggactca 292  Q
    |||||||||||||||| || |||| ||||||||||||||| ||||||||||||    
T  86460 gtgtgccattacaacgactttgcaaccctccacctctatatataggggactca 86512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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