View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2030_low_35 (Length: 250)
Name: NF2030_low_35
Description: NF2030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2030_low_35 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 20 - 250
Target Start/End: Complemental strand, 49084047 - 49083817
Alignment:
| Q |
20 |
catgtgtaacagcataaactagaccaggaaaggggtaaaaatcatgcacaaacagaattacaaaaatcaaagataactgtcattttagtgttgaataaag |
119 |
Q |
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| T |
49084047 |
catgtgtaacagcataaactagaccgggaaaggtgtaaaaatcatgcacaaacagaattacaaaaatcaaagataactgtcattttagtgttgaataaag |
49083948 |
T |
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| Q |
120 |
tttcttactttgtcagcacaatgaaaagcttgtataacatacatgtttagttatttgatatcataagaattcaaaaattcataatcaagtagtgaactca |
219 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49083947 |
tttcttactttgtcagcacaatgaaaagcttgtatagcatacatgtttagttatttgatatcataagaattcaaaaattcataatcaagtagtgaactca |
49083848 |
T |
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| Q |
220 |
ccaagaaaacgcagaagcatttgaatgattc |
250 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
49083847 |
ccaagaaaacgcagaagcatttgaatgattc |
49083817 |
T |
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