View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2030_low_50 (Length: 205)
Name: NF2030_low_50
Description: NF2030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2030_low_50 |
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Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 936827 - 936642
Alignment:
| Q |
1 |
taccaatcttgcatcttcatctctaagttctctttgtgacatggttaacccttcagaatcaccaccaccttttgaaccatacctcacagtactttttgat |
100 |
Q |
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| T |
936827 |
taccaatcttgcatcttcatctctaagttctctttgtgacatggttaacccttcagaatcaccaccaccttttgaaccatacctcacagtactttttgat |
936728 |
T |
|
| Q |
101 |
cctgaatggtttaaactactcatttccctcacagaattgttcctcttgctagaacccatagaatgaatggacatggaacttttgct |
186 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
936727 |
cctgaatggtttaaactactcatttccctcacagaattgttcctcttgctagaacccatagaatgaatggacatggaacttttgct |
936642 |
T |
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