View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20312_low_39 (Length: 244)
Name: NF20312_low_39
Description: NF20312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20312_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 21252693 - 21252905
Alignment:
| Q |
16 |
gtagaccctaaatcaaaaccactgcatattaactataaatgcaacaaaatctggatttgcttgtcnnnnnnnnn-tctggatttgttcaaatctaaatta |
114 |
Q |
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| T |
21252693 |
gtagaccctaaatcaaaaccactgcatattaactataaatgcaacaaaatctggatttgcttgtcaaaaaaaaaatctggatttgttcaaatctaaatta |
21252792 |
T |
|
| Q |
115 |
tatattgtgaacattttgaaagccatccaaattgcttgaatccattatcaaaattaacaagcatttacctccaaactatataatttgttatttcaaatat |
214 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21252793 |
tatattgtgaacattttgaaagccatccaaattacttgaatccattatcaaaattaacaagcatttacctccaaactatataatttgttatttcaaatat |
21252892 |
T |
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| Q |
215 |
attaatcaccttt |
227 |
Q |
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||||||||||||| |
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| T |
21252893 |
attaatcaccttt |
21252905 |
T |
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