View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20312_low_7 (Length: 495)

Name: NF20312_low_7
Description: NF20312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20312_low_7
NF20312_low_7
[»] chr3 (54 HSPs)
chr3 (302-482)||(7980830-7981010)
chr3 (1-180)||(29932353-29932523)
chr3 (1-180)||(29981507-29981677)
chr3 (184-271)||(7981041-7981128)
chr3 (5-161)||(54026952-54027098)
chr3 (114-191)||(2571379-2571457)
chr3 (113-190)||(2566592-2566669)
chr3 (93-182)||(45983596-45983685)
chr3 (114-182)||(10307877-10307945)
chr3 (94-180)||(23638050-23638136)
chr3 (94-180)||(54527707-54527793)
chr3 (94-182)||(50204494-50204582)
chr3 (94-182)||(51401531-51401619)
chr3 (111-182)||(3863437-3863508)
chr3 (111-182)||(16875024-16875095)
chr3 (122-181)||(40930170-40930229)
chr3 (108-181)||(35414809-35414882)
chr3 (113-181)||(46492343-46492411)
chr3 (113-180)||(8165756-8165823)
chr3 (131-182)||(12515473-12515524)
chr3 (113-188)||(51618157-51618232)
chr3 (94-180)||(42180143-42180229)
chr3 (127-180)||(27549668-27549721)
chr3 (113-182)||(40330294-40330363)
chr3 (95-164)||(41541333-41541402)
chr3 (113-180)||(51567821-51567885)
chr3 (138-182)||(23523081-23523125)
chr3 (94-178)||(23803049-23803133)
chr3 (126-182)||(29686443-29686499)
chr3 (92-180)||(37332202-37332290)
chr3 (138-182)||(38389582-38389626)
chr3 (131-182)||(11611104-11611155)
chr3 (111-182)||(32553474-32553545)
chr3 (131-181)||(20938185-20938235)
chr3 (94-180)||(31318732-31318818)
chr3 (126-180)||(40497170-40497224)
chr3 (140-181)||(33474473-33474514)
chr3 (131-180)||(37055367-37055416)
chr3 (112-181)||(48346365-48346433)
chr3 (116-181)||(48776887-48776952)
chr3 (132-180)||(10712600-10712648)
chr3 (131-187)||(25633126-25633182)
chr3 (112-180)||(46845144-46845212)
chr3 (131-177)||(11611042-11611088)
chr3 (1-63)||(13495300-13495362)
chr3 (131-181)||(13495422-13495472)
chr3 (131-181)||(15862902-15862952)
chr3 (110-180)||(32090339-32090409)
chr3 (1-63)||(32553373-32553435)
chr3 (121-179)||(38277451-38277509)
chr3 (131-180)||(41151761-41151810)
chr3 (92-180)||(7940881-7940969)
chr3 (138-182)||(36426408-36426452)
chr3 (131-183)||(49396508-49396560)
[»] chr6 (38 HSPs)
chr6 (1-180)||(31503749-31503919)
chr6 (1-188)||(34733693-34733872)
chr6 (1-183)||(28469864-28470037)
chr6 (114-182)||(14228125-14228193)
chr6 (114-182)||(28943768-28943836)
chr6 (94-182)||(34692445-34692533)
chr6 (131-182)||(17552586-17552637)
chr6 (131-183)||(29863300-29863352)
chr6 (131-182)||(3853071-3853122)
chr6 (131-182)||(33017852-33017903)
chr6 (111-183)||(31568217-31568289)
chr6 (108-180)||(31790917-31790989)
chr6 (95-181)||(10887121-10887207)
chr6 (131-184)||(29065422-29065475)
chr6 (131-184)||(29120275-29120328)
chr6 (126-182)||(2830680-2830736)
chr6 (134-182)||(13391806-13391854)
chr6 (131-182)||(31169762-31169813)
chr6 (138-185)||(32614940-32614987)
chr6 (119-181)||(4371955-4372017)
chr6 (116-177)||(20979084-20979146)
chr6 (135-181)||(24979149-24979195)
chr6 (136-181)||(27819627-27819672)
chr6 (108-181)||(30591163-30591236)
chr6 (131-180)||(31069583-31069632)
chr6 (134-182)||(3261209-3261257)
chr6 (125-181)||(3484697-3484753)
chr6 (92-180)||(6016945-6017033)
chr6 (112-164)||(6832184-6832236)
chr6 (108-164)||(17154728-17154784)
chr6 (138-182)||(18332687-18332731)
chr6 (131-182)||(17596469-17596520)
chr6 (108-182)||(12454170-12454244)
chr6 (113-179)||(23936378-23936444)
chr6 (131-181)||(29074438-29074488)
chr6 (131-181)||(29079202-29079252)
chr6 (131-181)||(29107011-29107061)
chr6 (144-181)||(22284748-22284785)
[»] chr8 (76 HSPs)
chr8 (1-180)||(16586723-16586893)
chr8 (1-180)||(42781481-42781651)
chr8 (1-188)||(10543621-10543800)
chr8 (9-180)||(42195-42357)
chr8 (114-182)||(3306054-3306122)
chr8 (113-181)||(38212944-38213012)
chr8 (94-185)||(12189584-12189675)
chr8 (94-185)||(12434012-12434103)
chr8 (114-182)||(2161498-2161566)
chr8 (94-182)||(28014857-28014945)
chr8 (95-182)||(14961662-14961749)
chr8 (19-170)||(16832335-16832471)
chr8 (94-182)||(9580108-9580196)
chr8 (114-182)||(12132094-12132162)
chr8 (114-182)||(26363989-26364057)
chr8 (94-182)||(27874680-27874768)
chr8 (111-182)||(10129211-10129282)
chr8 (131-190)||(18567407-18567466)
chr8 (131-182)||(26682196-26682247)
chr8 (111-182)||(29642711-29642782)
chr8 (108-182)||(14816125-14816199)
chr8 (108-182)||(14829541-14829615)
chr8 (108-182)||(15198899-15198973)
chr8 (112-182)||(32089465-32089535)
chr8 (111-180)||(13327942-13328011)
chr8 (112-180)||(4080395-4080463)
chr8 (133-181)||(13496709-13496757)
chr8 (113-181)||(22838335-22838403)
chr8 (114-170)||(36967081-36967137)
chr8 (131-182)||(6818145-6818196)
chr8 (111-182)||(7140458-7140529)
chr8 (92-179)||(7393247-7393333)
chr8 (131-194)||(9801796-9801859)
chr8 (92-179)||(20514722-20514809)
chr8 (108-182)||(35678274-35678348)
chr8 (113-166)||(297205-297258)
chr8 (131-180)||(4084544-4084593)
chr8 (131-180)||(4102851-4102900)
chr8 (108-181)||(9825058-9825131)
chr8 (116-181)||(16445736-16445801)
chr8 (93-181)||(32582789-32582875)
chr8 (131-184)||(39701800-39701853)
chr8 (94-182)||(38843795-38843883)
chr8 (131-182)||(1203729-1203780)
chr8 (135-182)||(5573418-5573465)
chr8 (115-182)||(7977990-7978057)
chr8 (1-60)||(12131989-12132048)
chr8 (131-182)||(26834689-26834740)
chr8 (131-182)||(31812241-31812292)
chr8 (108-186)||(35583471-35583550)
chr8 (131-182)||(39024856-39024907)
chr8 (127-182)||(43717551-43717606)
chr8 (118-180)||(32186301-32186363)
chr8 (135-180)||(14391578-14391623)
chr8 (140-181)||(40225987-40226028)
chr8 (138-182)||(8284567-8284611)
chr8 (94-166)||(24993430-24993502)
chr8 (131-179)||(44091446-44091494)
chr8 (108-178)||(44745344-44745413)
chr8 (134-182)||(45006100-45006148)
chr8 (111-191)||(45519552-45519632)
chr8 (1-60)||(14816238-14816297)
chr8 (1-60)||(14829443-14829502)
chr8 (111-182)||(31451432-31451503)
chr8 (113-180)||(37389472-37389539)
chr8 (108-166)||(34327458-34327516)
chr8 (114-180)||(41979875-41979941)
chr8 (122-179)||(7489721-7489778)
chr8 (113-182)||(12958610-12958679)
chr8 (115-180)||(14456861-14456926)
chr8 (113-182)||(19343835-19343904)
chr8 (115-180)||(30156011-30156076)
chr8 (94-182)||(31133926-31134012)
chr8 (138-179)||(38047940-38047981)
chr8 (144-180)||(11946921-11946957)
chr8 (92-180)||(34741666-34741754)
[»] chr2 (54 HSPs)
chr2 (1-180)||(3951257-3951427)
chr2 (1-180)||(8847794-8847964)
chr2 (1-180)||(3286502-3286672)
chr2 (1-180)||(43941855-43942025)
chr2 (114-182)||(38248419-38248487)
chr2 (94-182)||(4576325-4576413)
chr2 (111-182)||(16126558-16126629)
chr2 (131-182)||(24729576-24729627)
chr2 (108-182)||(9450362-9450436)
chr2 (108-182)||(29157828-29157902)
chr2 (121-182)||(8065241-8065302)
chr2 (114-182)||(5583557-5583625)
chr2 (114-182)||(7757785-7757853)
chr2 (113-185)||(26003342-26003414)
chr2 (113-180)||(12919351-12919418)
chr2 (113-179)||(15411624-15411690)
chr2 (114-180)||(34213950-34214016)
chr2 (113-182)||(9747427-9747496)
chr2 (108-181)||(20566017-20566090)
chr2 (112-181)||(45062307-45062376)
chr2 (108-188)||(35729222-35729302)
chr2 (94-182)||(43806451-43806539)
chr2 (111-182)||(4821384-4821455)
chr2 (111-182)||(12016774-12016845)
chr2 (131-182)||(17265532-17265583)
chr2 (108-182)||(36731285-36731359)
chr2 (126-179)||(2060044-2060097)
chr2 (138-187)||(6109524-6109573)
chr2 (118-194)||(9895127-9895203)
chr2 (108-164)||(17234955-17235011)
chr2 (131-179)||(19228553-19228601)
chr2 (138-181)||(15231966-15232009)
chr2 (111-170)||(22705562-22705621)
chr2 (131-182)||(27665043-27665094)
chr2 (113-164)||(37471757-37471808)
chr2 (131-181)||(23932693-23932743)
chr2 (92-158)||(39607431-39607497)
chr2 (112-182)||(43388480-43388550)
chr2 (108-180)||(2544210-2544283)
chr2 (140-181)||(5853463-5853504)
chr2 (131-180)||(8770887-8770936)
chr2 (131-180)||(16123406-16123455)
chr2 (140-181)||(16493532-16493573)
chr2 (145-181)||(11660894-11660930)
chr2 (111-179)||(14377532-14377600)
chr2 (94-182)||(29142165-29142253)
chr2 (140-171)||(25948176-25948207)
chr2 (1-52)||(35729122-35729173)
chr2 (94-185)||(15749196-15749289)
chr2 (111-181)||(16919154-16919224)
chr2 (140-181)||(22704674-22704715)
chr2 (112-180)||(6765109-6765177)
chr2 (121-181)||(7720233-7720293)
chr2 (112-180)||(14285094-14285162)
[»] chr7 (53 HSPs)
chr7 (1-180)||(42593395-42593565)
chr7 (2-180)||(38798071-38798240)
chr7 (1-170)||(38798219-38798379)
chr7 (1-180)||(28061324-28061494)
chr7 (19-180)||(45645392-45645544)
chr7 (114-182)||(33343099-33343167)
chr7 (108-182)||(32117919-32117993)
chr7 (94-182)||(4969864-4969952)
chr7 (113-181)||(25709399-25709467)
chr7 (114-182)||(34270372-34270440)
chr7 (114-182)||(46290121-46290189)
chr7 (111-182)||(39757109-39757180)
chr7 (95-196)||(23982740-23982841)
chr7 (92-180)||(7899487-7899575)
chr7 (111-182)||(3561877-3561948)
chr7 (111-182)||(9332069-9332140)
chr7 (92-183)||(22041724-22041815)
chr7 (94-181)||(29398134-29398221)
chr7 (131-182)||(33072109-33072160)
chr7 (94-181)||(45501550-45501637)
chr7 (131-184)||(8091309-8091362)
chr7 (131-180)||(26050462-26050511)
chr7 (131-180)||(26059821-26059870)
chr7 (135-182)||(820540-820587)
chr7 (94-165)||(12624728-12624798)
chr7 (131-182)||(47457460-47457511)
chr7 (113-179)||(26037203-26037269)
chr7 (108-181)||(26300676-26300749)
chr7 (94-182)||(8420832-8420920)
chr7 (111-179)||(18102232-18102300)
chr7 (131-183)||(36548458-36548510)
chr7 (131-179)||(41331458-41331506)
chr7 (118-181)||(2341864-2341927)
chr7 (111-182)||(5909281-5909352)
chr7 (131-182)||(7170130-7170181)
chr7 (131-182)||(19889468-19889519)
chr7 (135-178)||(24462958-24463001)
chr7 (134-181)||(29692540-29692587)
chr7 (135-182)||(36032542-36032589)
chr7 (85-184)||(6587866-6587967)
chr7 (108-182)||(7040251-7040325)
chr7 (115-169)||(12650932-12650986)
chr7 (122-179)||(28323254-28323311)
chr7 (113-181)||(384431-384498)
chr7 (112-180)||(3530115-3530183)
chr7 (138-181)||(8595032-8595075)
chr7 (111-182)||(12085930-12086001)
chr7 (139-182)||(44807035-44807078)
chr7 (138-180)||(5833490-5833532)
chr7 (131-181)||(22334021-22334071)
chr7 (134-180)||(44473513-44473559)
chr7 (108-153)||(6622260-6622305)
chr7 (1-38)||(28061329-28061366)
[»] chr5 (46 HSPs)
chr5 (1-180)||(12332344-12332514)
chr5 (1-180)||(31613150-31613320)
chr5 (1-180)||(31704936-31705106)
chr5 (1-180)||(40454068-40454238)
chr5 (1-142)||(13761677-13761809)
chr5 (108-181)||(32019984-32020057)
chr5 (114-182)||(6863667-6863735)
chr5 (113-181)||(23995416-23995484)
chr5 (94-182)||(3398311-3398399)
chr5 (114-182)||(30839892-30839960)
chr5 (114-182)||(36597690-36597758)
chr5 (92-181)||(35469643-35469732)
chr5 (111-182)||(4047520-4047591)
chr5 (131-179)||(30893757-30893805)
chr5 (131-182)||(2795651-2795702)
chr5 (138-181)||(12641993-12642036)
chr5 (115-182)||(13515925-13515992)
chr5 (112-182)||(11636840-11636910)
chr5 (112-182)||(35151328-35151398)
chr5 (111-180)||(14466495-14466564)
chr5 (131-187)||(8103574-8103630)
chr5 (92-160)||(10664986-10665054)
chr5 (112-180)||(16174623-16174691)
chr5 (94-170)||(36474640-36474716)
chr5 (94-181)||(15837366-15837453)
chr5 (96-187)||(26376510-26376600)
chr5 (113-180)||(34578121-34578188)
chr5 (131-178)||(40513079-40513126)
chr5 (118-181)||(40980488-40980551)
chr5 (131-181)||(31365950-31366000)
chr5 (113-179)||(31567493-31567559)
chr5 (112-181)||(15240950-15241019)
chr5 (144-185)||(29766308-29766349)
chr5 (131-180)||(41350330-41350379)
chr5 (94-182)||(18841704-18841792)
chr5 (91-170)||(24014699-24014778)
chr5 (1-63)||(5958233-5958295)
chr5 (127-169)||(16161068-16161110)
chr5 (113-182)||(14695112-14695181)
chr5 (111-164)||(15190981-15191034)
chr5 (94-155)||(26265070-26265131)
chr5 (135-180)||(29855898-29855943)
chr5 (121-182)||(42239571-42239631)
chr5 (111-163)||(30328345-30328397)
chr5 (136-180)||(33072812-33072856)
chr5 (113-181)||(40166392-40166459)
[»] chr4 (64 HSPs)
chr4 (1-180)||(41887570-41887740)
chr4 (1-180)||(32459338-32459507)
chr4 (5-180)||(49250336-49250502)
chr4 (1-141)||(43759507-43759638)
chr4 (94-182)||(19468285-19468373)
chr4 (94-182)||(19450899-19450987)
chr4 (131-182)||(40049686-40049737)
chr4 (96-182)||(18882266-18882352)
chr4 (92-181)||(1378107-1378195)
chr4 (95-180)||(16667385-16667470)
chr4 (113-182)||(23438265-23438334)
chr4 (95-184)||(29190813-29190902)
chr4 (94-182)||(17409915-17410003)
chr4 (94-182)||(27019351-27019439)
chr4 (94-182)||(33632202-33632289)
chr4 (113-181)||(36971384-36971452)
chr4 (114-182)||(39876941-39877009)
chr4 (114-182)||(50352413-50352481)
chr4 (131-182)||(9759141-9759192)
chr4 (114-181)||(10658417-10658484)
chr4 (114-181)||(10872562-10872629)
chr4 (111-182)||(23051381-23051452)
chr4 (95-182)||(49181164-49181251)
chr4 (108-182)||(51691446-51691520)
chr4 (94-180)||(52391389-52391475)
chr4 (92-180)||(51070399-51070485)
chr4 (94-178)||(24684928-24685012)
chr4 (126-182)||(35999946-36000002)
chr4 (113-181)||(46803909-46803977)
chr4 (95-182)||(54495636-54495723)
chr4 (108-170)||(19626474-19626536)
chr4 (138-188)||(27362526-27362576)
chr4 (131-181)||(40682560-40682609)
chr4 (92-169)||(2096960-2097037)
chr4 (108-182)||(9326864-9326940)
chr4 (108-182)||(9373586-9373662)
chr4 (108-182)||(9381898-9381974)
chr4 (113-182)||(34941388-34941457)
chr4 (134-182)||(3085801-3085849)
chr4 (108-184)||(27756666-27756742)
chr4 (139-179)||(42479894-42479934)
chr4 (134-182)||(44916642-44916690)
chr4 (94-181)||(23545567-23545654)
chr4 (138-181)||(47326892-47326935)
chr4 (138-181)||(47341688-47341731)
chr4 (131-182)||(49228782-49228833)
chr4 (127-170)||(49332962-49333005)
chr4 (126-180)||(23553693-23553747)
chr4 (112-182)||(53376407-53376477)
chr4 (131-181)||(53961450-53961500)
chr4 (140-181)||(4779436-4779477)
chr4 (145-182)||(13214415-13214452)
chr4 (138-182)||(8736810-8736854)
chr4 (131-182)||(4329722-4329773)
chr4 (94-185)||(16069203-16069294)
chr4 (113-180)||(55813974-55814041)
chr4 (131-181)||(32279199-32279249)
chr4 (131-165)||(41488734-41488768)
chr4 (126-180)||(48910803-48910857)
chr4 (131-180)||(10097689-10097738)
chr4 (131-180)||(10389269-10389318)
chr4 (113-182)||(24297482-24297551)
chr4 (135-179)||(22130684-22130728)
chr4 (112-164)||(37784877-37784929)
[»] chr1 (68 HSPs)
chr1 (1-180)||(42589179-42589349)
chr1 (1-180)||(44012932-44013102)
chr1 (1-180)||(9661903-9662073)
chr1 (19-182)||(4249231-4249385)
chr1 (94-182)||(6180277-6180365)
chr1 (114-182)||(23576413-23576481)
chr1 (92-180)||(35438804-35438892)
chr1 (94-182)||(38812831-38812919)
chr1 (94-181)||(51920431-51920518)
chr1 (92-182)||(4249619-4249709)
chr1 (92-182)||(4249943-4250033)
chr1 (92-180)||(9516670-9516758)
chr1 (92-180)||(13241846-13241934)
chr1 (114-182)||(35512836-35512904)
chr1 (131-182)||(1502719-1502770)
chr1 (94-188)||(13321967-13322061)
chr1 (112-180)||(41676561-41676629)
chr1 (111-182)||(313857-313928)
chr1 (111-182)||(6569984-6570055)
chr1 (112-187)||(25465267-25465342)
chr1 (121-191)||(39310776-39310846)
chr1 (108-181)||(29635748-29635821)
chr1 (111-184)||(30288861-30288934)
chr1 (113-182)||(36490889-36490958)
chr1 (121-181)||(1366165-1366225)
chr1 (92-184)||(20357359-20357451)
chr1 (92-184)||(20562504-20562596)
chr1 (94-182)||(22167426-22167514)
chr1 (126-182)||(44918147-44918203)
chr1 (131-182)||(30362994-30363045)
chr1 (131-182)||(34802095-34802146)
chr1 (134-180)||(5875216-5875262)
chr1 (135-181)||(23591830-23591876)
chr1 (113-190)||(4607585-4607662)
chr1 (92-164)||(24669016-24669088)
chr1 (138-182)||(30172014-30172058)
chr1 (138-182)||(30187555-30187599)
chr1 (108-164)||(49392186-49392242)
chr1 (135-190)||(51382446-51382502)
chr1 (131-182)||(6754599-6754650)
chr1 (131-182)||(39150326-39150377)
chr1 (108-181)||(2222236-2222307)
chr1 (108-182)||(6307607-6307681)
chr1 (126-184)||(10896476-10896534)
chr1 (94-182)||(3168067-3168155)
chr1 (131-180)||(19277909-19277958)
chr1 (113-170)||(28016290-28016347)
chr1 (135-180)||(32201756-32201801)
chr1 (113-170)||(39930812-39930869)
chr1 (92-180)||(43909282-43909368)
chr1 (95-156)||(51467545-51467606)
chr1 (138-182)||(3096344-3096388)
chr1 (134-182)||(5879102-5879150)
chr1 (113-181)||(47355378-47355446)
chr1 (136-180)||(48085862-48085906)
chr1 (138-181)||(16966500-16966543)
chr1 (131-182)||(17919581-17919632)
chr1 (127-182)||(26767470-26767524)
chr1 (131-182)||(41624957-41625008)
chr1 (131-181)||(33048124-33048174)
chr1 (122-180)||(43317582-43317640)
chr1 (92-169)||(8062293-8062370)
chr1 (92-149)||(43286355-43286412)
chr1 (108-180)||(281067-281139)
chr1 (94-182)||(21036720-21036808)
chr1 (108-180)||(30107137-30107208)
chr1 (108-164)||(38539189-38539245)
chr1 (108-164)||(38561407-38561463)
[»] scaffold0192 (1 HSPs)
scaffold0192 (108-180)||(13564-13636)
[»] scaffold0011 (1 HSPs)
scaffold0011 (126-184)||(13208-13266)
[»] scaffold0305 (1 HSPs)
scaffold0305 (113-181)||(17788-17856)
[»] scaffold0229 (1 HSPs)
scaffold0229 (121-181)||(24527-24587)
[»] scaffold0006 (1 HSPs)
scaffold0006 (92-184)||(158913-159005)
[»] scaffold0061 (1 HSPs)
scaffold0061 (131-182)||(52778-52829)
[»] scaffold0017 (1 HSPs)
scaffold0017 (131-182)||(145805-145856)
[»] scaffold0149 (1 HSPs)
scaffold0149 (136-180)||(22597-22641)
[»] scaffold0111 (2 HSPs)
scaffold0111 (138-182)||(37113-37157)
scaffold0111 (115-181)||(41094-41160)
[»] scaffold0009 (1 HSPs)
scaffold0009 (136-180)||(191316-191360)
[»] scaffold0136 (1 HSPs)
scaffold0136 (92-179)||(1445-1532)
[»] scaffold0018 (1 HSPs)
scaffold0018 (111-182)||(182151-182221)
[»] scaffold0727 (1 HSPs)
scaffold0727 (126-180)||(5814-5868)
[»] scaffold0128 (1 HSPs)
scaffold0128 (108-182)||(44293-44367)
[»] scaffold0073 (1 HSPs)
scaffold0073 (108-182)||(16534-16608)
[»] scaffold0036 (1 HSPs)
scaffold0036 (115-181)||(94018-94084)
[»] scaffold0631 (1 HSPs)
scaffold0631 (136-180)||(557-601)
[»] scaffold0618 (1 HSPs)
scaffold0618 (131-179)||(8416-8464)
[»] scaffold0155 (1 HSPs)
scaffold0155 (115-182)||(3412-3479)
[»] scaffold0503 (1 HSPs)
scaffold0503 (92-170)||(9098-9176)
[»] scaffold0074 (1 HSPs)
scaffold0074 (131-181)||(45497-45547)
[»] scaffold0007 (1 HSPs)
scaffold0007 (131-181)||(2448-2498)


Alignment Details
Target: chr3 (Bit Score: 138; Significance: 6e-72; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 302 - 482
Target Start/End: Complemental strand, 7981010 - 7980830
Alignment:
Q  302 tggtcccttttctaatatgtaaaatataaataggaccacaaagccaataaatttttcttttgtaggccatgacgtagcacgcctacaaagggcatgcaac 401  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7981010 tggtcccttttctaatatgtaaaatataaataggaccacaaagccaataaatctttcttttgtaggccatgacgtagcacgcctacaaagggcatgcaac 7980911  T
Q  402 tcaactatatgtaaaagctttattgtgatcgaannnnnnnnnnnnnggtacaaaccggtggttttattcgctatattcttc 482  Q
    |||||||||||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||    
T  7980910 tcaactatatgtaaaagctttattgtgatcgaatttttcattcttgggtacaaaccggtggttttattcgctatattcttc 7980830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 29932523 - 29932353
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         |||||||||    
T  29932523 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatattt 29932433  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  29932432 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 29932353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 29981677 - 29981507
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         |||||||||    
T  29981677 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatattt 29981587  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  29981586 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 29981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 7981128 - 7981041
Alignment:
Q  184 tatttattataataagtaaccgttaaatttttatcaattaattaagccttcaatattatatgcctactacttttctaatctttttatc 271  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7981128 tatttattataataaggaaccgttaaatttttatcaattaattaagccttcaatattatatgcctactacttttctaatctttttatc 7981041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 54027098 - 54026952
Alignment:
Q  5 catgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatatttaatg 104  Q
    |||||||||  || |||||||||| |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||         |||||||||    
T  54027098 catgtgcaatattgcacatgttaa-gatactaaaagaagcaactttttattgaaaactacagttgttattaaaaagaatata---------tatttaatg 54027009  T
Q  105 ttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaa 161  Q
    |  |||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  54027008 taaaatacacaagtttcaatataaatttactattttaaatttcttaacatttgcaaa 54026952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 2571379 - 2571457
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa-ccttatttatt 191  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2571379 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttatttatt 2571457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 2566592 - 2566669
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatttat 190  Q
    ||||||||||||| ||| ||||||||||||||||  ||||||||| |||||||||||| ||||||||||||| |||||    
T  2566592 acaagtttcaatacaaaattactattttaaattttctaacatgtgtaaatttgcacatgatagaaaaaccttttttat 2566669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 45983596 - 45983685
Alignment:
Q  93 atatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||| || |||  ||||||||||||||||| || |||||||||| |||||||| ||||||||||||||||| ||| |||||||    
T  45983596 atatatttaatattaaatgtacaagtttcaatataaaatttctattttaaacttcttaacctgtgcaaatttgcacatgataaaaaaacc 45983685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 10307877 - 10307945
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10307877 caagttccaatgcaaatttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 10307945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 23638136 - 23638050
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||| |  |||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||| ||| ||| |||||    
T  23638136 tatatttaatataaaatacacaagtttcaagactaacttaccattttaaatttcttaacatgtgcaaatttgctcatgatataaaaa 23638050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 180
Target Start/End: Complemental strand, 54527793 - 54527707
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||| || |||  ||||||| ||||| ||| ||  |||||||||||||||||||||||||||||||||||| |||||||||    
T  54527793 tatatttaatattaaatgtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaatttgcacataatagaaaaa 54527707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 50204494 - 50204582
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||| ||| ||||| ||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  50204494 tatatttaatattaaatgtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 50204582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 51401531 - 51401619
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  51401531 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgtacataatagaaaaacc 51401619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 3863437 - 3863508
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||  |||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  3863437 acacaagttccaagctaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 3863508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 16875095 - 16875024
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||  |||| |||||| |||||| |||||||||||||||||||||||||  |||||||||||    
T  16875095 acacaagtttcaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacacgatagaaaaacc 16875024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 122 - 181
Target Start/End: Original strand, 40930170 - 40930229
Alignment:
Q  122 aatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||| || |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  40930170 aatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 40930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 35414882 - 35414809
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||| || ||||||||| |||||||||| || ||||||||||||| |||||||||||| ||||||||||    
T  35414882 aatatacaacttccaatataaagttactattttgaacttcttaacatgtgtaaatttgcacatgatagaaaaac 35414809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 46492411 - 46492343
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||  ||| |||||| ||||||||||||||| |||| |||||||||||| ||||||||||    
T  46492411 acaagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaatttgcacatgatagaaaaac 46492343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 8165756 - 8165823
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||| ||||| ||| ||  ||||||||| |||||||||||||||||||||||||| |||||||||    
T  8165756 acaagttccaatacaaaatttatattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 8165823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 12515524 - 12515473
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  12515524 ttactattttaaattttttaacatgtgcaaatttacacatgatagaaaaacc 12515473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 51618157 - 51618232
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttattt 188  Q
    ||||||| ||||  ||| |||| |||| ||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  51618157 acaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctattt 51618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 42180143 - 42180229
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||| || |||  ||||||| ||||| ||| ||  ||||||||| |||||||||||||||||||| ||||| |||||||||    
T  42180143 tatatttaatattaaatgtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 42180229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 27549668 - 27549721
Alignment:
Q  127 aaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||| | ||||||| ||||||||||||||||||||||| |||||||||    
T  27549668 aaacttactactctaaattttttaacatgtgcaaatttgcacataatagaaaaa 27549721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 40330363 - 40330294
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||| ||| ||||| |||||||||||||||| ||||||||| |||||| |||||| || ||||||||    
T  40330363 acaagttccaagataaaattactattttaaattttttaacatgtacaaattcgcacatgattgaaaaacc 40330294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 41541402 - 41541333
Alignment:
Q  95 atatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    ||||||||| || |||  ||||||||||||||||| ||||||||||||| || ||| |||||||||||||    
T  41541402 atatttaatattaaatgtacaagtttcaatataaatttactattttaaactttttatcatgtgcaaattt 41541333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 51567885 - 51567821
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||| ||| || ||||||||||   |||||||||||||||||||||||| |||||||||    
T  51567885 acaagtttcaatacaaaatttctattttaaa---cttaacatgtgcaaatttgcacatgatagaaaaa 51567821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 23523081 - 23523125
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  23523081 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 23523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 23803133 - 23803049
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaa 178  Q
    |||||||||| |  |||| ||||||| ||||  ||| || |||||||||| ||||||||||||||||||||||| || |||||||    
T  23803133 tatatttaatatgaaatatacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcatatgatagaaa 23803049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 29686443 - 29686499
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  29686443 taaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 29686499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 37332202 - 37332290
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  ||||||||| ||| || | |||||||| ||||||||||| | |||||||| |||||||||||| ||| |||||    
T  37332202 tatatatttaatataaaatacacaaatttaaagacaaacttaccattttaaatttatcaacatgtgtaaatttgcacataataaaaaaa 37332290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 38389582 - 38389626
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  38389582 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 38389626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 11611104 - 11611155
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  11611104 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 11611155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 32553474 - 32553545
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||  |||| ||| || |||||| ||||||||||||| |||||| ||||| |||||||||||    
T  32553474 acacaagtttcaaattaaagttattaatttaaacttcttaacatgtgtaaatttacacatgatagaaaaacc 32553545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 20938185 - 20938235
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||| |||||| ||||||||||||||||||| ||||||||||    
T  20938185 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 20938235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 31318732 - 31318818
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||| || |||  ||||||| ||||  ||| || |||| ||||| |||||||||||||||||||| ||||| |||||||||    
T  31318732 tatatttaatattaaatgtacaagttccaatgcaaaatttctatcttaaacttcttaacatgtgcaaattttcacatgatagaaaaa 31318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 40497170 - 40497224
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||| |||||||||    
T  40497170 taaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 40497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 33474514 - 33474473
Alignment:
Q  140 taaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  33474514 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 33474473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 37055416 - 37055367
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||| ||||||| |||||||||||| ||||| |||||||||    
T  37055416 ttactattttaaacttcttaatatgtgcaaattttcacatgatagaaaaa 37055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 48346433 - 48346365
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||| ||| | |||||||| ||||||||||  ||||||||| ||||||| ||||||||||||||||    
T  48346433 cacaagttccaaaacaaacttaccattttaaattg-ttaacatgttcaaatttacacattatagaaaaac 48346365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 48776887 - 48776952
Alignment:
Q  116 agtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||| |||| ||||| |||||||||||||||| |||||||||||| | || ||||||||||    
T  48776887 agttccaatgtaaatttacttttttaaatttcttaacttgtgcaaatttgaatatgatagaaaaac 48776952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 10712648 - 10712600
Alignment:
Q  132 tactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||||||||| ||||| |||||||||| || |||||||||    
T  10712648 tactattttaaatttcttagcatgttcaaatttgcaaataatagaaaaa 10712600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 25633126 - 25633182
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatt 187  Q
    |||||||||| || ||||||||| || ||||||||||||| ||||||||||| ||||    
T  25633126 ttactattttgaacttcttaacaagttcaaatttgcacatgatagaaaaaccctatt 25633182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 46845212 - 46845144
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||||  |||| |||  |||| || |||||||||||| ||||||||||||| |||||||||    
T  46845212 cacaagtttcaatgcaaacatacccttttgaacttcttaacatgtacaaatttgcacatgatagaaaaa 46845144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 11611042 - 11611088
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaa 177  Q
    |||||| |||||| |||||| ||||||||||||||||||| ||||||    
T  11611042 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaa 11611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 13495300 - 13495362
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatca 63  Q
    ||||||||||||||||| |||||||||| |  | |||||| || || ||||||||||||||||    
T  13495300 ctaacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatca 13495362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 13495422 - 13495472
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||| |||||| ||||||||||||| ||||| ||||||||||    
T  13495422 ttactactttaaacttcttatcatgtgcaaattttcacatgatagaaaaac 13495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 15862952 - 15862902
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||| | |||||||||||| ||||| ||||| ||||||||||    
T  15862952 ttactattttaaactccttaacatgtgcgaatttacacatgatagaaaaac 15862902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 32090339 - 32090409
Alignment:
Q  110 tacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||| | |||| ||| ||||||||||||| || || ||||||||||||||| ||||  ||||||||    
T  32090339 tacacaagtctaaatacaaatttactattttaaactttttcacatgtgcaaatttgtacatgttagaaaaa 32090409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32553373 - 32553435
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatca 63  Q
    |||||||||||||  ||||||||||||| |  |||||||| || ||||||| |||||||||||    
T  32553373 ctaacatgtgcaatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaatca 32553435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 38277451 - 38277509
Alignment:
Q  121 caatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    ||||| ||| || |||||||||| |||||||||||||||||||| |||||  |||||||    
T  38277451 caatacaaaatttctattttaaacttcttaacatgtgcaaatttacacatcgtagaaaa 38277509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 41151761 - 41151810
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| |||||| |||||| |||||| |||||||||||| |||||||||    
T  41151761 ttactactttaaacttcttatcatgtgtaaatttgcacatgatagaaaaa 41151810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 7940881 - 7940969
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  |||||| ||||| ||| | ||| |||| |||||||||||||||||   || ||||||||| || |||||||||    
T  7940881 tatatatttaatataaaatacagaagttacaagacaaatttaccattttaaatttcttaacgcatgtaaatttgcatatgatagaaaaa 7940969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 36426452 - 36426408
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||||||||||| |||||| ||||| |||||||||||    
T  36426452 tttaaacttcttaacatgtgtaaatttacacatgatagaaaaacc 36426408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 49396508 - 49396560
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacct 183  Q
    |||||| |||||| ||||||| |||| |||||||||||||  |||||||||||    
T  49396508 ttactactttaaacttcttaatatgtacaaatttgcacatggtagaaaaacct 49396560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 5e-54; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 31503749 - 31503919
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||    
T  31503749 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacagttgttattaa---------aaagaatatatattt 31503839  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||| |  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||    
T  31503840 aatataaaatacacaagttccaatataaacttactactttaaatttcttaacatgtgcaaatttgcacatattagaaaaa 31503919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 34733872 - 34733693
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         |||||||||    
T  34733872 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatattt 34733782  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa-ccttattt 188  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  |||||||| ||||||||    
T  34733781 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaatccttattt 34733693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 28469864 - 28470037
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaac-tttttattgaaaatcacagttgttattaaaaagaatataaagaatatatatt 99  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||| ||         ||||||||||||||    
T  28469864 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaacttttttattgaaaatcacacttgttataaa---------aaagaatatatatt 28469954  T
Q  100 taatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacct 183  Q
    ||||| | |||||||||||| | | | ||  |||||| ||||   | |||||||||||||||||||||||| ||||||||||||    
T  28469955 taatg-taaatacacaagttccgacacaattttactactttagtatccttaacatgtgcaaatttgcacatgatagaaaaacct 28470037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 14228193 - 14228125
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14228193 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 14228125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 28943836 - 28943768
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28943836 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 28943768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 34692445 - 34692533
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  34692445 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 34692533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 17552637 - 17552586
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17552637 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 17552586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 29863352 - 29863300
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacct 183  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  29863352 ttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacct 29863300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 3853071 - 3853122
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  3853071 ttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 3853122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 33017852 - 33017903
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  33017852 ttactattttaaattttttaacatgtgcaaatttgcacataatagaaaaacc 33017903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 31568217 - 31568289
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacct 183  Q
    |||||||||||||   ||| |||||| |||||| || ||||||||||||||||||||||| ||||||||||||    
T  31568217 acacaagtttcaaatcaaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaacct 31568289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 31790989 - 31790917
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| ||||||||| | |||||| | |||||||||||||||| ||||||||||||||| || |||||||||    
T  31790989 aatacataagtttcaagacaaacttgccattttaaatttcttaatatgtgcaaatttgcatatgatagaaaaa 31790917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 10887121 - 10887207
Alignment:
Q  95 atatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||| |  |||||||||||| |||   ||| |||| | |||||| |||||||||||||||||||||||||| ||||||||||    
T  10887121 atatttaatataaaatacacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 10887207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 29065475 - 29065422
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    ||||||||||||| || ||||||||||||| ||||||||| |||||||||||||    
T  29065475 ttactattttaaactttttaacatgtgcaagtttgcacatgatagaaaaacctt 29065422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 29120328 - 29120275
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    ||||||||||||| || ||||||||||||| ||||||||| |||||||||||||    
T  29120328 ttactattttaaactttttaacatgtgcaagtttgcacatgatagaaaaacctt 29120275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 2830736 - 2830680
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| ||| ||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  2830736 taaagttattattttaaacttcttaacatgtgcaaatttgtacatgatagaaaaacc 2830680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 13391806 - 13391854
Alignment:
Q  134 ctattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  13391806 ctattttaaacttcttaacatgcgcaaatttgcacatgatagaaaaacc 13391854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 31169813 - 31169762
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||||||| ||||||||||||||||| ||||| |||||||||||    
T  31169813 ttactactttaaatttgttaacatgtgcaaatttacacatgatagaaaaacc 31169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 32614987 - 32614940
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctta 185  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  32614987 tttaaacttcttaacatgtgcaaatttgtacatgatagaaaaacctta 32614940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 4371955 - 4372017
Alignment:
Q  119 ttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||| ||| || |||||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  4371955 ttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcgcatgatagaaaaac 4372017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 20979084 - 20979146
Alignment:
Q  116 agtttcaatataaacttac-tattttaaatttcttaacatgtgcaaatttgcacattatagaa 177  Q
    |||||||||  |||||||| | ||||||| |||||||||||||||||||||||||| ||||||    
T  20979084 agtttcaatgaaaacttacattttttaaacttcttaacatgtgcaaatttgcacatgatagaa 20979146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 24979195 - 24979149
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||||    
T  24979195 tattttaaacatcttaacatgtgcaaatttgcacatgatagaaaaac 24979149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 136 - 181
Target Start/End: Complemental strand, 27819672 - 27819627
Alignment:
Q  136 attttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||    
T  27819672 attttaaacttcttaacatgtgcaaatttgtacatgatagaaaaac 27819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 30591236 - 30591163
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| ||||||| ||||  ||| |||| |||| ||| ||||||||||||| |||||||||||| ||||||||||    
T  30591236 aatatacaagttacaatgcaaaattaccatttaaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 30591163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 31069632 - 31069583
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| |||||| ||||||||||||| |||||||||||| |||||||||    
T  31069632 ttactaatttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 31069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 3261209 - 3261257
Alignment:
Q  134 ctattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||||||||| |||||||||||| |||||||||||    
T  3261209 ctattttaaactttttaacatgtgtaaatttgcacatgatagaaaaacc 3261257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 3484753 - 3484697
Alignment:
Q  125 ataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||||||||| |||||||||  || |||| ||||||| ||||||||||    
T  3484753 ataaacttactattttaaacttcttaacaaatgtaaatctgcacatgatagaaaaac 3484697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 6016945 - 6017033
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  ||| |||||||| |||   ||| |||| | |||||| || ||||||||||||||||||||||| |||||||||    
T  6016945 tatatatttaatatgaaatgcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 6017033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 6832184 - 6832236
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    ||||||||| ||| |||| |||||||||||||||| || ||||||||||||||    
T  6832184 cacaagttttaatgtaaatttactattttaaattttttgacatgtgcaaattt 6832236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 17154728 - 17154784
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    |||||||||||||||| | |||| || |||||||||||| |||||||||| ||||||    
T  17154728 aatacacaagtttcaaaacaaacctattattttaaattttttaacatgtgtaaattt 17154784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 18332731 - 18332687
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  18332731 tttaaacttcttaacatgtgaaaatttgcacatgatagaaaaacc 18332687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 17596469 - 17596520
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||||| ||||||||||||| |||||||||||    
T  17596469 ttactactttaaacttcttatcatgtacaaatttgcacatgatagaaaaacc 17596520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 12454170 - 12454244
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||| ||| |  || |||| ||||||||||| |||| |||||||||||| || || |||||||||||    
T  12454170 aatacacaagttccaaaaccaatttaccattttaaattttttaaaatgtgcaaatttacatatgatagaaaaacc 12454244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 23936444 - 23936378
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    ||||||| ||| | ||| ||||||| ||||| || ||||||||||||||||||||||| ||| ||||    
T  23936444 acaagttccaaaagaaagttactatgttaaacttgttaacatgtgcaaatttgcacatgataaaaaa 23936378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 29074488 - 29074438
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||||||| || ||||||||||||| ||||||||| ||||||||||    
T  29074488 ttacaattttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29074438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 29079252 - 29079202
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||||||| || ||||||||||||| ||||||||| ||||||||||    
T  29079252 ttacaattttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29079202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 29107061 - 29107011
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||||||| || ||||||||||||| ||||||||| ||||||||||    
T  29107061 ttacaattttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29107011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 22284748 - 22284785
Alignment:
Q  144 tttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  22284748 tttcttgacatgtgcaaatttgcacatgatagaaaaac 22284785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 16586893 - 16586723
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         |||||||||    
T  16586893 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatattt 16586803  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||| ||||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  16586802 aatgtacaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 16586723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 42781481 - 42781651
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         ||| |||||||||||    
T  42781481 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaataatatatattt 42781571  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  ||||||||||||||||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  42781572 aatgtataatacacaagtttcaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 42781651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 10543800 - 10543621
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         ||| |||||||||||    
T  10543800 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaataatatatattt 10543710  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa-ccttattt 188  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  |||||||| ||||||||    
T  10543709 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaatccttattt 10543621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 9 - 180
Target Start/End: Complemental strand, 42357 - 42195
Alignment:
Q  9 tgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatatttaatgttca 108  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         ||||||||||||||  |    
T  42357 tgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatatttaatgtaaa 42267  T
Q  109 atacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||||||||||||||||| | ||||   | ||||||||||||||||||||||||  ||||||||    
T  42266 atacacaagtttcaatataaacttaccactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 42195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 3306122 - 3306054
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3306122 caagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 3306054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 38213012 - 38212944
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  38213012 acaagtttcaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 38212944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 12189675 - 12189584
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctta 185  Q
    |||||||||| || |||  ||||||| ||||||||| || |||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  12189675 tatatttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacctta 12189584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 12434103 - 12434012
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctta 185  Q
    |||||||||| || |||  ||||||| ||||||||| || |||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  12434103 tatatttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacctta 12434012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 2161498 - 2161566
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2161498 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 2161566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 28014945 - 28014857
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  28014945 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 28014857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 14961749 - 14961662
Alignment:
Q  95 atatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |  ||| |||||||| ||||| ||| ||||||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  14961749 atatttaatttaaaatgcacaagttccaatacaaaattactattttaaacttcttagcatgtgcaaatttgcacatgatagaaaaacc 14961662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 16832471 - 16832335
Alignment:
Q  19 cacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatatttaatgttcaatacacaagt 118  Q
    |||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||||||          || | |||||||| ||  |||||||||||    
T  16832471 cacatgttaaggatactaaaagaagcaactttttattaaaaaccacagttgttattaaaaa----------aaaaaatatttaa-gtaaaatacacaagt 16832383  T
Q  119 ttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    | | |||||||||||||| |||||||||||||    ||||||||||||||||    
T  16832382 tccgatataaacttactactttaaatttctta----gtgcaaatttgcacat 16832335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 9580196 - 9580108
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||||||||| ||| || |||||||||| ||||||||||||| |||||||||||| ||| |||||||    
T  9580196 tatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcacatgataaaaaaacc 9580108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 12132094 - 12132162
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||||| |||||| || |||||||||||    
T  12132094 caagttccaatacaaacttactactttaaatttcttaacatgtgcaagtttgcagatgatagaaaaacc 12132162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 26364057 - 26363989
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  26364057 caagttccaatgcaaagttactattttaaatttcttaacatgcgcaaatttgcacatgatagaaaaacc 26363989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 27874768 - 27874680
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| ||  ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  27874768 tatatttaatattaaatgtacaagttccaatacaaaatttgtattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 27874680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 10129211 - 10129282
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||  |||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  10129211 acacaagttccaagttaaaattactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 10129282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 18567466 - 18567407
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatttat 190  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||||    
T  18567466 ttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatttat 18567407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 26682196 - 26682247
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  26682196 ttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 26682247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 29642711 - 29642782
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||| | |||||||| |||||||||| |||| ||| ||||||||||||||| |||||||||||    
T  29642711 acacaagtttcaagacaaacttaccattttaaattccttatcatatgcaaatttgcacatgatagaaaaacc 29642782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 14816199 - 14816125
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||| ||   ||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  14816199 aatacacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaacc 14816125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 14829541 - 14829615
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||| ||   ||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  14829541 aatacacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaacc 14829615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 15198973 - 15198899
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| ||||||| ||||  ||| ||||||||| |||||| ||||||||||||||||||||||| |||||||||||    
T  15198973 aatatacaagttacaatgcaaagttactatttaaaattttttaacatgtgcaaatttgcacatgatagaaaaacc 15198899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 32089535 - 32089465
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| ||| || |||||||||||||| | ||||||||||||||||||||| || |||||||||||    
T  32089535 cacaagtttcgataaaatcttactattttaaactgcttaacatgtgcaaatttgcatataatagaaaaacc 32089465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 13328011 - 13327942
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||||   ||| |||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  13328011 acacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 13327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 4080463 - 4080395
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||   ||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  4080463 cacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaa 4080395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 181
Target Start/End: Complemental strand, 13496757 - 13496709
Alignment:
Q  133 actattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  13496757 actattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 22838335 - 22838403
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||| ||| |||| ||  ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  22838335 acaagttttaatgtaaagtttttattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 22838403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 36967137 - 36967081
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    |||||||||||| ||| || |||||||||| ||||||||||||||||||||||||||    
T  36967137 caagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaatttgcacat 36967081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 6818145 - 6818196
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  6818145 ttactattttaaacttcttaacatgtacaaatttgcacatgatagaaaaacc 6818196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 7140529 - 7140458
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||  |||| |||||| |||||| ||||||| |||||||||||||||||| |||||||||||    
T  7140529 acacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaacc 7140458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 7393333 - 7393247
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||||||||| |  |||||||||||| ||| | ||| |||||||||||||||| |||||||||||||||| |||||| ||| ||||    
T  7393333 tatatatttaatataaaatacacaagttacaagacaaa-ttactattttaaattttttaacatgtgcaaattcgcacatgataaaaaa 7393247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 9801796 - 9801859
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatttattata 194  Q
    |||||| |||||| |||||||||||||||||||||||||| || |||||||| | |||||||||    
T  9801796 ttactactttaaacttcttaacatgtgcaaatttgcacatgattgaaaaaccctttttattata 9801859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 20514722 - 20514809
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||||||||| |  |||  ||||||| ||| | |||||||| ||||||||||||||||| ||||||||| ||||||| ||||||||    
T  20514722 tatatatttaatataaaatgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaatatgcacatgatagaaaa 20514809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 35678348 - 35678274
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||||||   ||| |||||| |||||| |||||| ||||||||||||||||||| ||| |||||||    
T  35678348 aatacacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgataaaaaaacc 35678274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 297205 - 297258
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgc 166  Q
    ||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  297205 acaagtttcaatacaaagttattattttaaacttcttaacatgtgcaaatttgc 297258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 4084593 - 4084544
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  4084593 ttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaa 4084544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 4102900 - 4102851
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  4102900 ttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaa 4102851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 9825058 - 9825131
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||||||||| | |||| ||| ||||||| ||| |||||||||||| |||| ||||| ||||||||||    
T  9825058 aatacacaagtttcaagacaaacctaccattttaatttttttaacatgtgcatatttacacatgatagaaaaac 9825131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 16445801 - 16445736
Alignment:
Q  116 agtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| ||||| ||| || |||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  16445801 agttccaatacaaaatttctattttaaacttcttaatatgtgcaaatttgcacataatagaaaaac 16445736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 32582875 - 32582789
Alignment:
Q  93 atatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||||||  ||| | |||||||||  |||||||||||||||| ||  |||||||||||||||  |||||||| ||||||||||    
T  32582875 atatatttaatgtaaaatgcgcaagtttcagaataaacttactattttgaacatcttaacatgtgcaa--ttgcacatgatagaaaaac 32582789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 39701853 - 39701800
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    |||||| |||||| || ||||||||||||||||||||||| |||||||||||||    
T  39701853 ttactactttaaacttgttaacatgtgcaaatttgcacatgatagaaaaacctt 39701800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 38843795 - 38843883
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| ||  ||||||||| |||||| ||||||||||||| ||||| |||||||||||    
T  38843795 tatatttaatattaaatgtacaagttccaataaaaaatttatattttaaacttcttagcatgtgcaaatttacacatgatagaaaaacc 38843883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 1203729 - 1203780
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  1203729 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 1203780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Original strand, 5573418 - 5573465
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  5573418 tattttaaacttcttaacatgtacaaatttgcacatgatagaaaaacc 5573465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 7977990 - 7978057
Alignment:
Q  115 aagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||| ||| |||| |||||||| || ||||||| |||||||||||| || |||||||||||    
T  7977990 aagtttcaatacaaaattaccattttaaactttttaacatttgcaaatttgcatatgatagaaaaacc 7978057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12131989 - 12132048
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaa 60  Q
    |||||||||||||  || ||||||||||||| | |||||| |||||||||||||||||||    
T  12131989 ctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaa 12132048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 26834689 - 26834740
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| |||||||||||||||| || ||||||||||||||| |||||||||||    
T  26834689 ttaccattttaaatttcttaatatatgcaaatttgcacatgatagaaaaacc 26834740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 31812241 - 31812292
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| |||||||| ||||||| |||||||||||||||||| |||||||||||    
T  31812241 ttaccattttaaacttcttaatatgtgcaaatttgcacatgatagaaaaacc 31812292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 35583471 - 35583550
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaa-atttgcacattatagaaaaaccttat 186  Q
    ||||||||||||||||| |||||||| ||||||||| ||||| ||||||| ||  ||||||||| ||| |||| ||||||    
T  35583471 aatacacaagtttcaatgtaaacttaatattttaaacttcttcacatgtgaaatttttgcacataataaaaaatccttat 35583550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 39024907 - 39024856
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  39024907 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 39024856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 43717606 - 43717551
Alignment:
Q  127 aaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||| || ||||||||||||| |||||||||||| |||||||||||    
T  43717606 aaacttacttttttgaaattcttaacatgtgtaaatttgcacatgatagaaaaacc 43717551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 32186301 - 32186363
Alignment:
Q  118 tttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| || |||||||||| || ||||||| ||||||||||||||  |||||||||    
T  32186301 tttcaatataaaatttctattttaaacttattaacatatgcaaatttgcacacgatagaaaaa 32186363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 14391623 - 14391578
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||| ||||||||||||||||||||| |||| |||||||||    
T  14391623 tattttaaacttcttaacatgtgcaaatttggacatcatagaaaaa 14391578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 40226028 - 40225987
Alignment:
Q  140 taaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  40226028 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 40225987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 8284611 - 8284567
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||    
T  8284611 tttaaacttcttaacatgtacaaatttgcacatgatagaaaaacc 8284567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 24993430 - 24993502
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgc 166  Q
    |||||||||| ||||||  |||| ||  |||| ||| ||  ||||||||||||||||||||||||||||||||    
T  24993430 tatatttaatattcaatgtacaaattctaatacaaaatttttattttaaatttcttaacatgtgcaaatttgc 24993502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 44091446 - 44091494
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||| ||||||||||||||||| ||||||||| ||||| ||||||||    
T  44091446 ttactactttaaatttcttaacatatgcaaatttacacatgatagaaaa 44091494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 44745344 - 44745413
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatt-tcttaacatgtgcaaatttgcacattatagaaa 178  Q
    |||||| |||||||||||||||||| |||||||||||| | |||  ||||| || |||||||||||||||||    
T  44745344 aatacataagtttcaatataaacttgctattttaaattgtgtta--atgtgtaagtttgcacattatagaaa 44745413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 45006100 - 45006148
Alignment:
Q  134 ctattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| ||||||||||||||||||||||  || |||||||||||    
T  45006100 ctattttaaacttcttaacatgtgcaaatttgcttatgatagaaaaacc 45006148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 191
Target Start/End: Complemental strand, 45519632 - 45519552
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatttatt 191  Q
    ||||||||| |||  |||| |||||| |||||| |||||| ||||||||||||||  ||| |||||||| |||| ||||||    
T  45519632 acacaagttccaagttaaagttactactttaaacttcttatcatgtgcaaatttgtgcatgatagaaaacccttttttatt 45519552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14816297 - 14816238
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaa 60  Q
    |||||||||||||  || ||||||||||||| | |||||| || ||||||||||||||||    
T  14816297 ctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaa 14816238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14829443 - 14829502
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaa 60  Q
    |||||||||||||  || ||||||||||||| | |||||| || ||||||||||||||||    
T  14829443 ctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaa 14829502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 31451432 - 31451503
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||  |||| |||||| |||||| ||||||||| ||||||||||   ||| |||||||||||    
T  31451432 acacaagtttcaagttaaagttactactttaaacttcttaacacgtgcaaatttatccatgatagaaaaacc 31451503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 37389472 - 37389539
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||| | ||| ||| || ||||||||||||||| |||  |||||| |||||||||||||||    
T  37389472 acaagtttcaaaacaaagttattaatttaaatttcttaacttgtataaatttacacattatagaaaaa 37389539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 34327516 - 34327458
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgc 166  Q
    ||||||||| ||| |||| ||| ||||||| ||||| ||||||| ||||||||||||||    
T  34327516 aatacacaaattttaatacaaatttactatattaaacttcttaatatgtgcaaatttgc 34327458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 41979941 - 41979875
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |||  |  ||||||||||||||||| ||||| |||||||||||  |||||||||    
T  41979941 caagtttcaatacaaaaattttattttaaatttcttaatatgtgtaaatttgcacaggatagaaaaa 41979875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 7489721 - 7489778
Alignment:
Q  122 aatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||| ||||||| ||||||||| |||| ||||||  ||||||||||||| ||||||||    
T  7489721 aatacaaacttattattttaaaattctaaacatgcacaaatttgcacatgatagaaaa 7489778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 12958610 - 12958679
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||| |||||| |||  |||| |||||||  ||||||| |||| ||||||||||||| |||||||||||    
T  12958610 acaagcttcaatgtaacattacaattttaagcttcttaatatgtacaaatttgcacatgatagaaaaacc 12958679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 14456926 - 14456861
Alignment:
Q  115 aagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||| ||| ||  |||||| || ||||||  |||||||||||||||||| |||||||||    
T  14456926 aagtttcaatacaaaatttttattttcaacttcttattatgtgcaaatttgcacatcatagaaaaa 14456861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 19343904 - 19343835
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||   ||| |||||| ||||||  | ||||||||||||||||||||||| ||| |||||||    
T  19343904 acaagtttcaagtcaaaattactactttaaacgtgttaacatgtgcaaatttgcacatgataaaaaaacc 19343835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 30156011 - 30156076
Alignment:
Q  115 aagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||| ||||||| | |||||||||| |||| || |||||||||| |||| ||| |||||    
T  30156011 aagtttcaatacaaacttatttttttaaattttttaatatatgcaaatttgtacatgataaaaaaa 30156076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 31133926 - 31134012
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| |  |||||||| ||||||| |||||  ||| ||||||||||||||| |  ||| ||||| |||||| |||||||||||    
T  31133926 tatatttaatataaaatacacaggtttcaagataaatataccattttaaatttcttacc--gtgtaaattcgcacatcatagaaaaacc 31134012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 38047981 - 38047940
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||||| |||||||||||||||||||||||| ||| ||||    
T  38047981 tttaaattacttaacatgtgcaaatttgcacataataaaaaa 38047940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 11946957 - 11946921
Alignment:
Q  144 tttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  11946957 tttcttaacatgtgcaaatttacacatgatagaaaaa 11946921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 34741754 - 34741666
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  ||| ||||||||  |||| ||||||| ||||||||| || ||||||||  ||||||| || || |||||||||    
T  34741754 tatatatttaatataaaatgcacaagttctaatacaaacttattattttaaactttttaacatgaacaaatttacatatgatagaaaaa 34741666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 3951257 - 3951427
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         |||||||||||||||    
T  3951257 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatatatattt 3951347  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  ||||||||||||||||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  3951348 aatgtaaaatacacaagtttcaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 3951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 8847794 - 8847964
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         |||||||||||||||    
T  8847794 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatatatattt 8847884  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  ||||||||||||||||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  8847885 aatgtaaaatacacaagtttcaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 8847964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 3286502 - 3286672
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         |||||||||||||||    
T  3286502 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatatatattt 3286592  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  3286593 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 3286672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 43942025 - 43941855
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         ||| |||||||||||    
T  43942025 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaaaaatatatattt 43941935  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  43941934 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 43941855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 38248487 - 38248419
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38248487 caagttccaatgtaaaattactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 38248419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 4576413 - 4576325
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||||||||| ||| || ||||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  4576413 tatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaatttcttaacatatgcgaatttgcacatgatagaaaaacc 4576325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 16126629 - 16126558
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||  |||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  16126629 acacaagtttcaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 16126558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 24729627 - 24729576
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24729627 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 24729576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 9450362 - 9450436
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| || ||||| |||| ||||| |||||||||||||||||||||| |||||||||| |||||||||||    
T  9450362 aatacacaaattccaatacaaacatactactttaaatttcttaacatgtgcagatttgcacatgatagaaaaacc 9450436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 29157902 - 29157828
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| ||||||| ||||  ||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  29157902 aatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 29157828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 8065241 - 8065302
Alignment:
Q  121 caatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  8065241 caatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 8065302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 5583625 - 5583557
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  5583625 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcgcatgatagaaaaacc 5583557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 7757853 - 7757785
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  7757853 caagttccaatgcaaagttactattttaaatttcttaacatgtgtaaatttgcacatgatagaaaaacc 7757785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 26003414 - 26003342
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctta 185  Q
    |||| |||||||| ||| || |||||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  26003414 acaaatttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaccctta 26003342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 12919418 - 12919351
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||| ||| |||||    
T  12919418 acaagtttcaagataaagttactattttaaattttttaacatgtgtaaatttgcacatgataaaaaaa 12919351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 15411690 - 15411624
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    ||||||||||| | ||| ||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  15411690 acaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgttagaaaa 15411624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 34214016 - 34213950
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  34214016 caagttccaatgaaaaattactattttaaatttcttaacatgtgcaaatttgcacacgatagaaaaa 34213950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 9747427 - 9747496
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||| ||| | ||| ||||||||||||| ||||||||||||| |||||||||||| |||||||||||    
T  9747427 acaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatttgcacatgatagaaaaacc 9747496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 20566090 - 20566017
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||||| ||||| |||| || || |||||| ||||||||||||| |||||||||||| ||||||||||    
T  20566090 aatacacaagttccaatacaaacataatactttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 20566017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 45062307 - 45062376
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||| ||| ||||| |||||||||| || ||||||| |||||||||||||||||| ||||||||||    
T  45062307 cacaagttccaaaataaagttactattttgaacttcttaatatgtgcaaatttgcacatgatagaaaaac 45062376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 35729222 - 35729302
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttattt 188  Q
    |||||||||||| ||||||||| || ||| |||||| |||| |||||||||||||||| ||||  |||||||||| |||||    
T  35729222 aatacacaagttccaatataaatttgctactttaaacttctcaacatgtgcaaatttgtacatgttagaaaaaccctattt 35729302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 43806451 - 43806539
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||||||||| ||| || |||||||||| || ||||||||||||||||| ||||  |||||||||||    
T  43806451 tatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaatttacacacgatagaaaaacc 43806539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 4821384 - 4821455
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||   ||| |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  4821384 acacaagtttcaaatcaaagttactactttaaacttcttatcatgtgcaaatttgcacataatagaaaaacc 4821455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 12016774 - 12016845
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||  |||| |||||| |||||| ||||||| |||||||||||||||||| |||||||||||    
T  12016774 acacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaacc 12016845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 17265532 - 17265583
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  17265532 ttactattttaaatttcttaacaagtgcaaatttggacatgatagaaaaacc 17265583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 36731285 - 36731359
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||  || | ||| |||| |||||||||||||||||||||| |||||| ||||| |||||||||||    
T  36731285 aatacacaagttctaagacaaatttaccattttaaatttcttaacatgtgtaaatttacacatgatagaaaaacc 36731359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 2060097 - 2060044
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||| |||||| |||||||||||||||||||| |||||||||||| ||||||||    
T  2060097 taaagttactactttaaatttcttaacatgtgtaaatttgcacatcatagaaaa 2060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 6109524 - 6109573
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatt 187  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  6109524 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 6109573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 194
Target Start/End: Original strand, 9895127 - 9895203
Alignment:
Q  118 tttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatttattata 194  Q
    |||||||||||| ||| ||||||||| |||||||||| || ||||||||| || |||||||||| || ||| |||||    
T  9895127 tttcaatataaatttattattttaaacttcttaacatttgaaaatttgcatatgatagaaaaacatttttttttata 9895203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 17235011 - 17234955
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    |||| |||| || ||||| ||| ||||||||||||||||||||||||||||||||||    
T  17235011 aatatacaaattccaatacaaaattactattttaaatttcttaacatgtgcaaattt 17234955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 19228553 - 19228601
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  19228553 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 19228601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 15231966 - 15232009
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  15231966 tttaaacttcttaacatgtgcaaatttgcacataatagaaaaac 15232009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 22705562 - 22705621
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    |||||||||||||  |||| |||||| |||||| ||||||| ||||||||||||||||||    
T  22705562 acacaagtttcaagttaaaattactactttaaacttcttaaaatgtgcaaatttgcacat 22705621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 27665094 - 27665043
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  27665094 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 27665043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 37471808 - 37471757
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    ||||||||||| | ||| ||||||||||||| ||||||||||||||||||||    
T  37471808 acaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaattt 37471757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 23932693 - 23932743
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||| ||||||| || ||||||||||||||| ||||||||||    
T  23932693 ttactattttaaacttcttaatatatgcaaatttgcacatgatagaaaaac 23932743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 39607497 - 39607431
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgc 158  Q
    |||||||||||| |  |||||| || || ||||| ||||||| ||||||||||||||||||||||||    
T  39607497 tatatatttaatatgaaatacataacttccaatacaaacttattattttaaatttcttaacatgtgc 39607431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 43388550 - 43388480
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||| ||||  |||| |||  |||| || |||||||||||||||||||||||||| |||||||||||    
T  43388550 cacaagttccaatgcaaacatacctttttgaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 43388480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 2544283 - 2544210
Alignment:
Q  108 aatacacaagtttcaatataaacttactatttt-aaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||| |||| |||||||||||||| || ||| ||||||||| |||||||  |||| |||||||||    
T  2544283 aatacacaagttttaatacaaacttactattttgaacttttttaacatgttcaaatttttacatcatagaaaaa 2544210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 5853504 - 5853463
Alignment:
Q  140 taaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  5853504 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 5853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 8770936 - 8770887
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| |||||| |||||||||||||||||||||||||| ||| |||||    
T  8770936 ttactactttaaacttcttaacatgtgcaaatttgcacatgataaaaaaa 8770887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 16123406 - 16123455
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||||||||    
T  16123406 ttactaatttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 16123455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 16493573 - 16493532
Alignment:
Q  140 taaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  16493573 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 16493532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 11660930 - 11660894
Alignment:
Q  145 ttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||||||||||||||||||| ||||||||||    
T  11660930 ttcttaacatgtgcaaatttgcacatgatagaaaaac 11660894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 14377532 - 14377600
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||||||||||   ||| |||||| |||||| |||||| ||||| ||||||||||||| ||||||||    
T  14377532 acacaagtttcaagtcaaagttactactttaaacttcttatcatgtacaaatttgcacatgatagaaaa 14377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 29142165 - 29142253
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  |||||||  |||| ||| || |||| ||||| |||| |||||||| |||||||||||| |||||||||||    
T  29142165 tatatttaatattaaatgtacaagttaaaatacaaaatttctatattaaacttctaaacatgtgtaaatttgcacatgatagaaaaacc 29142253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 171
Target Start/End: Original strand, 25948176 - 25948207
Alignment:
Q  140 taaatttcttaacatgtgcaaatttgcacatt 171  Q
    ||||||||||||||||||||||||||||||||    
T  25948176 taaatttcttaacatgtgcaaatttgcacatt 25948207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35729122 - 35729173
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaacttttt 52  Q
    |||||||||||||  || |||||||||||||||| ||||||| |||||||||    
T  35729122 ctaacatgtgcaatattgcacatgttaaagatatcaaaagaatcaacttttt 35729173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 15749289 - 15749196
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttacta--ttttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctta 185  Q
    |||||||||| || |||  ||||||||| ||||||| ||  ||  ||| ||| |||||||||||||||||||||||||  |||||||| |||||    
T  15749289 tatatttaatattaaatgtacaagtttccatataaaatttatacatttgaaacttcttaacatgtgcaaatttgcacaaaatagaaaaccctta 15749196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 181
Target Start/End: Complemental strand, 16919224 - 16919154
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||||||   ||| |||||| |||||| || |||| |||||||||||||||||| ||||| ||||    
T  16919224 acacaagtttcaagtcaaagttactactttaaacttgttaatatgtgcaaatttgcacatgatagataaac 16919154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 22704674 - 22704715
Alignment:
Q  140 taaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| ||||||| |||||||||||||||||| ||||||||||    
T  22704674 taaacttcttaagatgtgcaaatttgcacatgatagaaaaac 22704715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 6765109 - 6765177
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||  |||| ||| ||| | ||||||| |||||||||||||||||| | ||||| |||||||||    
T  6765109 cacaagttataatacaaatttatttttttaaacttcttaacatgtgcaaatctacacatgatagaaaaa 6765177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 7720233 - 7720293
Alignment:
Q  121 caatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||| ||| || |||| ||||| || |||||| |||||||||||||||| ||||||||||    
T  7720233 caatacaaaatttctatcttaaactttttaacacgtgcaaatttgcacatgatagaaaaac 7720293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 14285162 - 14285094
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||  ||| |||||||||| ||||||||||||||| |||| || |||||| ||| ||| |||||    
T  14285162 cacaagttctaatgtaaacttacttttttaaatttcttaatatgtacagatttgcccatcataaaaaaa 14285094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 4e-42; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 42593565 - 42593395
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         |||||||||    
T  42593565 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatattt 42593475  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  42593474 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 42593395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 38798240 - 38798071
Alignment:
Q  2 taacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattta 101  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         ||||||||||    
T  38798240 taacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatattta 38798150  T
Q  102 atgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  38798149 atgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 38798071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 38798379 - 38798219
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         |||||||||    
T  38798379 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatattt 38798289  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||    
T  38798288 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacat 38798219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 28061494 - 28061324
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         ||| |||||||||||    
T  28061494 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaaaaatatatattt 28061404  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   |  |||||||||||||||||||||||  ||||||||    
T  28061403 aatgtaaaatacacaagttccaatataaacttactactttagtatctttaacatgtgcaaatttgcacatgttagaaaaa 28061324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 45645392 - 45645544
Alignment:
Q  19 cacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatatttaatgttcaatacacaagt 118  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||         ||||||||||||||||  |||||||||||    
T  45645392 cacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaag---------aatatatatttaatgtaaaatacacaagt 45645482  T
Q  119 ttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    | |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  45645483 tccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 45645544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 33343099 - 33343167
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33343099 caagttccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 33343167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 32117919 - 32117993
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| ||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||| |||||||||||    
T  32117919 aatatacaagtttcaagataaacttgccactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 32117993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 4969864 - 4969952
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  4969864 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 4969952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 25709467 - 25709399
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  25709467 acaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 25709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 34270372 - 34270440
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34270372 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 34270440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 46290121 - 46290189
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46290121 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 46290189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 39757180 - 39757109
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||||  |||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  39757180 acacaaatttcaagttaaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 39757109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 23982841 - 23982740
Alignment:
Q  95 atatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatttattata 194  Q
    ||||||||| |  |||||||||||| |||   ||| |||||| ||||||||||||||| ||||||||||||||||| |||||||||||   |||||||||    
T  23982841 atatttaatataaaatacacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaatttgcacatgatagaaaaacccattttattata 23982742  T
Q  195 at 196  Q
    ||    
T  23982741 at 23982740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 7899575 - 7899487
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  |||| |||||||  || | |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  7899575 tatatatttaatataaaatatacaagttataagacaaacttaccattttaaattttttaacatgtgcaaatttgcacatgatagaaaaa 7899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 3561948 - 3561877
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| ||  |||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  3561948 acacaagttttaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 3561877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 9332069 - 9332140
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||   ||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  9332069 acacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 9332140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 22041815 - 22041724
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacct 183  Q
    |||||||||||| | || |||| || ||| |||||||| ||| |||||| || ||||||||| |||||||||||||||| ||||||||||||    
T  22041815 tatatatttaatatacagtacataaattttaatataaatttagtattttgaacttcttaacaagtgcaaatttgcacatgatagaaaaacct 22041724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 29398221 - 29398134
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| ||||||||||||||||||||| |||| ||||||||||    
T  29398221 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgaacatgatagaaaaac 29398134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 33072109 - 33072160
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  33072109 ttactattttaaatttcttaacatgtacaaatttgcacatgatagaaaaacc 33072160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 45501550 - 45501637
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  45501550 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaagatgtgcaaatttgcacatgatagaaaaac 45501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 8091362 - 8091309
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||    
T  8091362 ttactattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacctt 8091309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 26050511 - 26050462
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  26050511 ttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26050462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 26059870 - 26059821
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  26059870 ttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 820587 - 820540
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  820587 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 820540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 12624728 - 12624798
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttg 165  Q
    |||||||||| |  ||||||||||||| || | |||||||| ||||||||||||||||||||||||||||||    
T  12624728 tatatttaatataaaatacacaagttt-aagacaaacttaccattttaaatttcttaacatgtgcaaatttg 12624798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 47457511 - 47457460
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  47457511 ttactactttaaattttttaacatgtgcaaatttgcacatgatagaaaaacc 47457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 26037203 - 26037269
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    ||||||| ||||| ||| || |||||||||| |||||||||| ||||||||||||||| ||||||||    
T  26037203 acaagttccaatacaaaatttctattttaaacttcttaacatctgcaaatttgcacatgatagaaaa 26037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 26300676 - 26300749
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| ||||||||||||  ||| ||||||||||||| || |||||||||||||||||| |||| || |||||||    
T  26300676 aatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatttgtacatgatggaaaaac 26300749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 8420920 - 8420832
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| |  || |||||||||  || |||||||||| ||||||||||| ||||||||| ||||||||  ||| |||||||||||    
T  8420920 tatatttaatataaaagacacaagttataagataaacttaccattttaaattttttaacatgtacaaatttgttcatgatagaaaaacc 8420832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 18102300 - 18102232
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||||||||||   ||| ||| || |||||| |||||||||||||||||||||||||| ||||||||    
T  18102300 acacaagtttcaagtcaaagttattaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 18102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 36548510 - 36548458
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacct 183  Q
    |||||| |||||| |||||||||||||||||||||||||| ||| ||||||||    
T  36548510 ttactaatttaaacttcttaacatgtgcaaatttgcacatgataaaaaaacct 36548458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 41331506 - 41331458
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  41331506 ttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaa 41331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 2341864 - 2341927
Alignment:
Q  118 tttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||| ||  |||||||||||||||| |||||||||||||||||  |||| ||||||||||    
T  2341864 tttcaatacaattttactattttaaattttttaacatgtgcaaatttatacatgatagaaaaac 2341927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 5909352 - 5909281
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||   ||| |||||| |||||| |||||| ||||||||||||| ||||| |||||||||||    
T  5909352 acacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttacacatgatagaaaaacc 5909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 7170130 - 7170181
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  7170130 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 7170181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 19889468 - 19889519
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  19889468 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 19889519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 24463001 - 24462958
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaa 178  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  24463001 tattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24462958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 29692587 - 29692540
Alignment:
Q  134 ctattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  29692587 ctattttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 29692540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 36032589 - 36032542
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||||||    
T  36032589 tattttaaatttcttaacatgtgaaaattttcacataatagaaaaacc 36032542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 6587866 - 6587967
Alignment:
Q  85 taaagaatatatatttaatgttcaatacacaagtttcaatataaacttactatttt--aaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| |||| ||||||| | || ||||||||||||| |||| ||| ||| | ||||  ||| || |||| |||||||||||||||||| |||||||||||    
T  6587866 taaaaaataaatatttattattaaatacacaagttttaatacaaatttaatttttttaaaactttttaatatgtgcaaatttgcacatgatagaaaaacc 6587965  T
Q  183 tt 184  Q
    ||    
T  6587966 tt 6587967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 7040325 - 7040251
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||| |||   |||| || || |||||| |||||||||||||||||||||||||| ||| |||||||    
T  7040325 aatacacaagttccaaatcaaacatagtactttaaacttcttaacatgtgcaaatttgcacatgatataaaaacc 7040251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 169
Target Start/End: Original strand, 12650932 - 12650986
Alignment:
Q  115 aagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcaca 169  Q
    ||||||||| | |||||||| ||||||||||||||||||||||||| || |||||    
T  12650932 aagtttcaagacaaacttaccattttaaatttcttaacatgtgcaatttagcaca 12650986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 122 - 179
Target Start/End: Original strand, 28323254 - 28323311
Alignment:
Q  122 aatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||||| ||| |||||||||||| |||||||||| |||||| ||||| ||||||||    
T  28323254 aatataaaattattattttaaattttttaacatgtgtaaatttacacatgatagaaaa 28323311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 384498 - 384431
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||| |||  |||| |||||| |||||| ||||||||||||||||||||||| || ||||||||||    
T  384498 acaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgca-atgatagaaaaac 384431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 3530183 - 3530115
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||| |||||||| |||||||||||| ||||  |||||| ||||| |||||||||||| ||| |||||    
T  3530183 cacaaatttcaataaaaacttactattctaaacgtcttaatatgtgtaaatttgcacatgatataaaaa 3530115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 8595032 - 8595075
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||    
T  8595032 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 8595075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 12086001 - 12085930
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||   ||| |||||  |||||| ||||||  |||||||||||||||||| |||||||||||    
T  12086001 acacaagtttcaagtcaaaattacttatttaaacttcttattatgtgcaaatttgcacatgatagaaaaacc 12085930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 44807035 - 44807078
Alignment:
Q  139 ttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||| ||| ||||||||||||||||||| |||||||||||    
T  44807035 ttaaatttattatcatgtgcaaatttgcacatgatagaaaaacc 44807078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 5833490 - 5833532
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| || ||||||||||||||||||||||| |||||||||    
T  5833490 tttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 5833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 22334071 - 22334021
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||| |||||||||||| ||||||||||||| || |||||||    
T  22334071 ttactactttaaacttcttaacatgtacaaatttgcacatgattgaaaaac 22334021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 44473559 - 44473513
Alignment:
Q  134 ctattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||| |||||||||||| ||||||||||||| ||| |||||    
T  44473559 ctattttaaacttcttaacatgttcaaatttgcacatgataaaaaaa 44473513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 6622305 - 6622260
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaaca 153  Q
    ||||||||| |||||| ||||| || ||||||||||||||||||||    
T  6622305 aatacacaattttcaaaataaaatttctattttaaatttcttaaca 6622260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28061329 - 28061366
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaa 38  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  28061329 ctaacatgtgcaaatttgcacatgttaaagatactaaa 28061366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 4e-42; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 12332344 - 12332514
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         |||||||||||||||    
T  12332344 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatatatattt 12332434  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  12332435 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 12332514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 31613320 - 31613150
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         |||||||||    
T  31613320 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatattt 31613230  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  31613229 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 31613150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 31704936 - 31705106
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         |||||||||||||||    
T  31704936 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatatatattt 31705026  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  31705027 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 31705106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 40454068 - 40454238
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         |||||||||||||||    
T  40454068 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatatatattt 40454158  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  40454159 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 40454238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 13761677 - 13761809
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         |||||||||||||||    
T  13761677 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatatatattt 13761767  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaa 142  Q
    |||||  |||||||||||| |||||||||||||||| |||||    
T  13761768 aatgtaaaatacacaagttccaatataaacttactactttaa 13761809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 32020057 - 32019984
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32020057 aatacacaagttccaagacaaacttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 32019984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 6863667 - 6863735
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  6863667 caagttccaatataaagttactattttaaattttttaacatgtgcaaatttgcacatgatagaaaaacc 6863735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 23995484 - 23995416
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  23995484 acaagtttcaatataaaattactattttaaacttcttaacatgtacaaatttgcacataatagaaaaac 23995416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 3398311 - 3398399
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  3398311 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 3398399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 30839892 - 30839960
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  30839892 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 30839960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 36597690 - 36597758
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36597690 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 36597758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 35469643 - 35469732
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||||| |  |||| || |||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  35469643 tatatatttaatataaaataaactagttccaataaaagcttactattttaaattttttaacatgtgcaaatttacacatgatagaaaaac 35469732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 4047520 - 4047591
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||  |||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  4047520 acacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 4047591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 30893757 - 30893805
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  30893757 ttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 30893805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 2795651 - 2795702
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  2795651 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 2795702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 12642036 - 12641993
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  12642036 tttaaacttcttaacatgtgcaaatttgcacattatagaaaaac 12641993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 13515992 - 13515925
Alignment:
Q  115 aagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||||||| | | ||||||||| ||||||||||||||||| ||||| |||||||||||    
T  13515992 aagtttcaagataaactttccactttaaatttgttaacatgtgcaaatttacacatgatagaaaaacc 13515925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 11636840 - 11636910
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||   ||| |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  11636840 cacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 11636910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 112 - 182
Target Start/End: Original strand, 35151328 - 35151398
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||| |||| |||| ||||||||||||| || ||||||| ||||||||||||||| || ||||||||    
T  35151328 cacaagttacaatgtaaatttactattttaaactttttaacatatgcaaatttgcacatgattgaaaaacc 35151398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 14466564 - 14466495
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||||  |||| |||||| |||||| ||||||||||||  |||||||||||| |||||||||    
T  14466564 acacaagtttcaagttaaagttactactttaaacttcttaacatgtctaaatttgcacatgatagaaaaa 14466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 8103630 - 8103574
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatt 187  Q
    |||||| |||||| |||||| ||||||||||||||||||| ||||||||||| ||||    
T  8103630 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctatt 8103574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 10665054 - 10664986
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaa 160  Q
    |||| ||||||| | ||||||||||||| ||| | |||||||| |||||||||||||||| ||||||||    
T  10665054 tataaatttaatatgcaatacacaagttccaagacaaacttaccattttaaatttcttaagatgtgcaa 10664986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 16174691 - 16174623
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||||  ||| |||||| |||||||||||||  ||||||||||||||| || |||||||||    
T  16174691 cacaagtttcaattcaaagttactactttaaatttcttatgatgtgcaaatttgcaaatgatagaaaaa 16174623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 36474716 - 36474640
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    |||||||||| || |||| ||||||||||||| ||| || |||||||||| || |||| |||||||| |||||||||    
T  36474716 tatatttaatattaaatatacaagtttcaatacaaaatttctattttaaactttttaatatgtgcaattttgcacat 36474640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 15837366 - 15837453
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||| |  ||| |||||||||||||| ||| |||||||||||  |||||||||| ||| ||||||| | || ||||||||||    
T  15837366 tatatttaatataaaatgcacaagtttcaatacaaatttactattttagttttcttaacaagtgtaaatttggatatgatagaaaaac 15837453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 26376600 - 26376510
Alignment:
Q  96 tatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatt 187  Q
    |||||||| || |||  ||||||||||||||||| || |||||| || ||  ||||||||||||||||| ||||| ||||||||||| ||||    
T  26376600 tatttaatattaaatgtacaagtttcaatataaaatttctatttgaactta-ttaacatgtgcaaatttacacataatagaaaaaccatatt 26376510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 34578121 - 34578188
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||| ||  |||| ||||||||||||| || ||||||||||||||||||||||| ||| |||||    
T  34578121 acaagttttaagttaaagttactattttaaactttttaacatgtgcaaatttgcacatgataaaaaaa 34578188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 178
Target Start/End: Original strand, 40513079 - 40513126
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaa 178  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||    
T  40513079 ttactattttaaattttttaacatgtgcaaatttgtacatgatagaaa 40513126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 40980488 - 40980551
Alignment:
Q  118 tttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||| ||| || |||||||||| || |||| |||||||||||||||||| ||||||||||    
T  40980488 tttcaatacaaaatttctattttaaactttttaatatgtgcaaatttgcacatgatagaaaaac 40980551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 31366000 - 31365950
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||| |||||||||||| ||||||||||||| ||||||||||    
T  31366000 ttactaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 31365950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 31567559 - 31567493
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||| |||||| | ||| |||| ||||||||||| |||||||||||||||||||| || ||||||||    
T  31567559 acaaatttcaagacaaaattaccattttaaattttttaacatgtgcaaatttgcatatgatagaaaa 31567493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 181
Target Start/End: Complemental strand, 15241019 - 15240950
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||| |||||||| ||| ||| |||||| || || ||||||||| ||||||||||||| ||||||||||    
T  15241019 cacaaatttcaatacaaatttaatattttgaactttttaacatgtacaaatttgcacatgatagaaaaac 15240950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 29766308 - 29766349
Alignment:
Q  144 tttcttaacatgtgcaaatttgcacattatagaaaaacctta 185  Q
    |||||||||||||||||| |||||||| ||||||||||||||    
T  29766308 tttcttaacatgtgcaaacttgcacatgatagaaaaacctta 29766349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 41350330 - 41350379
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| |||||| |||||||||||||||||||||||||| ||| |||||    
T  41350330 ttactactttaaacttcttaacatgtgcaaatttgcacatgataaaaaaa 41350379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 18841792 - 18841704
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  |||| |||||||| ||| || |||||||||| || ||||||| ||||||||||||||  ||| |||||||    
T  18841792 tatatttaatattaaatgtacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacacgataaaaaaacc 18841704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 24014778 - 24014699
Alignment:
Q  91 atatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    |||||||||||||    |||| |||||||||||| | || ||||||||| ||| || ||||||||||||||||| |||||    
T  24014778 atatatatttaatacaaaatatacaagtttcaatgtgaagttactatttaaaactttttaacatgtgcaaattttcacat 24014699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5958295 - 5958233
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatca 63  Q
    |||||||||||||  |||||||||||||||| | |||||| || || |||| |||||||||||    
T  5958295 ctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatca 5958233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 16161068 - 16161110
Alignment:
Q  127 aaacttactattttaaatttcttaacatgtgcaaatttgcaca 169  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||    
T  16161068 aaacttactattttaaatttcttcacacgtgcaaatttacaca 16161110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 14695181 - 14695112
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||  ||| |||||||| | ||||||| |||||||||||||| ||||| ||||| ||| |||||||    
T  14695181 acaagttctaatgtaaacttatttttttaaacttcttaacatgtgcgaattttcacatgatataaaaacc 14695112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 15190981 - 15191034
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    |||||||||||||   ||| |||||| |||||| ||||||||||||||||||||    
T  15190981 acacaagtttcaagtcaaaattactactttaaacttcttaacatgtgcaaattt 15191034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 26265131 - 26265070
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatg 155  Q
    |||||||||| || |||| ||||||||||||| |||  | |||||||||| |||||||||||    
T  26265131 tatatttaatattaaatatacaagtttcaatacaaaacttctattttaaacttcttaacatg 26265070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 29855943 - 29855898
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||| ||| |||||||||||||||||||| ||||| |||||||||    
T  29855943 tatttaaaacttcttaacatgtgcaaatttacacatgatagaaaaa 29855898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 182
Target Start/End: Original strand, 42239571 - 42239631
Alignment:
Q  121 caatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||| ||| || |||||||||| |||| |||||| |||||||||||||| |||||||||||    
T  42239571 caatacaaagtttctattttaaacttct-aacatgcgcaaatttgcacatgatagaaaaacc 42239631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 30328397 - 30328345
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatt 163  Q
    ||||||||| |||  |||| |||||| |||||| |||||||||||||||||||    
T  30328397 acacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatt 30328345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 33072812 - 33072856
Alignment:
Q  136 attttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||| |||||||||||||||||| | || |||||||||    
T  33072812 attttaaattttttaacatgtgcaaatttgtagataatagaaaaa 33072856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 40166392 - 40166459
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||| | | || ||| |||| |||| ||||||| ||||||||||||||| ||||||||||    
T  40166392 acaagtttcaatacatagttgctaatttagatttattaacat-tgcaaatttgcacataatagaaaaac 40166459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 41887740 - 41887570
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         ||| |||||||||||    
T  41887740 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaataatatatattt 41887650  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  ||||||||||||||||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  41887649 aatgtaaaatacacaagtttcaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 41887570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 32459338 - 32459507
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| |||||          ||| |||||||||||||||    
T  32459338 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgtt----------ataaaaagaatatatattt 32459427  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  32459428 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 32459507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 5 - 180
Target Start/End: Complemental strand, 49250502 - 49250336
Alignment:
Q  5 catgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatatttaatg 104  Q
    |||||||||  || ||||||||||  ||| ||||||||||||||||||||| |||| ||  |||||||||||||||||||||         |||||||||    
T  49250502 catgtgcaatattgcacatgttaataatactaaaagaagcaactttttattaaaaaccatggttgttattaaaaagaatata---------tatttaatg 49250412  T
Q  105 ttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |  ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||  ||||||||    
T  49250411 taaaatacacaagtttcaatataaacttgctactttaaatttcttaacatatgcaaatttgcacatgttagaaaaa 49250336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 43759638 - 43759507
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    |||||||||||||||||   |||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||||||         |||||||||    
T  43759638 ctaacatgtgcaaatttgaccatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaaaaagaa---------tatatattt 43759548  T
Q  101 aatgttcaatacacaagtttcaatataaacttactatttta 141  Q
    |||||  |||||||||||| |||||||||||||||| ||||    
T  43759547 aatgtaaaatacacaagttccaatataaacttactacttta 43759507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 19468285 - 19468373
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||||||||| ||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  19468285 tatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaacc 19468373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 19450987 - 19450899
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  19450987 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacataatagaaaaacc 19450899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 40049686 - 40049737
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  40049686 ttactattttaaatttcttaacatgtgcaaatttgcacataatagaaaaacc 40049737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 96 - 182
Target Start/End: Complemental strand, 18882352 - 18882266
Alignment:
Q  96 tatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||| || |||  ||||||| ||||| ||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  18882352 tatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 18882266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 1378107 - 1378195
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||||| || |||  ||||||||||| ||||| |||| |||||||||||||||||||||||||| |||||| | ||||||||||    
T  1378107 tatatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttcttaacatgtgcaaa-ttgcacctgatagaaaaac 1378195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 180
Target Start/End: Complemental strand, 16667470 - 16667385
Alignment:
Q  95 atatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||| |  ||||||||||||||||  |||| |||  |||||||| |||||||||||||||||||||||||| |||||||||    
T  16667470 atatttaatataaaatacacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 16667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 23438265 - 23438334
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||| | ||| ||||||||||||| |||| ||||||||||||||||||||| |||||||||||    
T  23438265 acaagtttcaaaacaaagttactattttaaaattctcaacatgtgcaaatttgcacataatagaaaaacc 23438334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 29190902 - 29190813
Alignment:
Q  95 atatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    ||||||||| || || ||||||||| |||   ||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  29190902 atatttaatattaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacctt 29190813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 17409915 - 17410003
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| |||||| ||||||||||||||||||| |||||||||||    
T  17409915 tatatttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 17410003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 27019351 - 27019439
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||||||||| ||| || |||||||||| || ||||||| ||||||||||||||| |||||||||||    
T  27019351 tatatttaatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacatgatagaaaaacc 27019439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 33632289 - 33632202
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||||||||||||| || |||||||||| || |||||||||||||||| |||||| |||||||||||    
T  33632289 tatatttaatattaaatgtacaagtttcaatataaattt-ctattttaaactttttaacatgtgcaaattcgcacatgatagaaaaacc 33632202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 36971384 - 36971452
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| | |||||||||| | ||||||||||    
T  36971384 acaagtttcaagataaagttactattttaaatttcttaacatgcgtaaatttgcacttgatagaaaaac 36971452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 39876941 - 39877009
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  39876941 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttacacatgatagaaaaacc 39877009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 50352413 - 50352481
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||  ||| ||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  50352413 caagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcatatgatagaaaaacc 50352481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 9759192 - 9759141
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  9759192 ttactattttaaatttcttaacatgtgcaaatttgtacatgatagaaaaacc 9759141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 10658484 - 10658417
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||| ||| ||||||    
T  10658484 caagtttcaatgtaaagttactattttaaattttttaacatgtgcaaattagcacatgataaaaaaac 10658417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 10872629 - 10872562
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||| ||| ||||||    
T  10872629 caagtttcaatgtaaagttactattttaaattttttaacatgtgcaaattagcacatgataaaaaaac 10872562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 23051452 - 23051381
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||   ||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  23051452 acacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaacc 23051381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 95 - 182
Target Start/End: Original strand, 49181164 - 49181251
Alignment:
Q  95 atatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |  ||| |||||||| ||||| ||| |||||||||| || ||||||||| |||||||||||||||| |||||||||||    
T  49181164 atatttaatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcacatgatagaaaaacc 49181251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 51691446 - 51691520
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| ||||||| ||||  ||| ||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  51691446 aatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaatttacacatgatagaaaaacc 51691520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 52391389 - 52391475
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| |||||||||||||||||||| ||||| |||||||||    
T  52391389 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 52391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 51070485 - 51070399
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  |||||||||||| ||| | |||||||| |||||||||||||||||  |||||||||| ||||| |||||||||    
T  51070485 tatatatttaatataaaatacacaagttacaaaacaaacttaccattttaaatttcttaac--gtgcaaattttcacatgatagaaaaa 51070399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 24684928 - 24685012
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaa 178  Q
    |||||||||| || |||  ||||||| ||||  ||| || |||||||||| |||||||||||||||||||||||||| |||||||    
T  24684928 tatatttaatattaaatgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 36000002 - 35999946
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  36000002 taaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 35999946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 46803909 - 46803977
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||||  |||||||||| ||||||| || |||| |||||||||||||||||| ||||||||||    
T  46803909 acaagtttcaacgtaaacttacttttttaaactttttaatatgtgcaaatttgcacatgatagaaaaac 46803977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 54495723 - 54495636
Alignment:
Q  95 atatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |  ||| |||||||| |||  |||| |||| | |||||| |||||||||||||||||||||||||| |||||||||||    
T  54495723 atatttaatatgaaatgcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 54495636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 19626474 - 19626536
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    ||||||||||||||| |  ||||||| | ||| ||||||||||||||||||||||||||||||    
T  19626474 aatacacaagtttcagtgcaaacttattttttaaaatttcttaacatgtgcaaatttgcacat 19626536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 27362526 - 27362576
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttattt 188  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  27362526 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctattt 27362576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 40682560 - 40682609
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  40682560 ttactattttaaatttcttaacatgtgcaaa-ttgcacatgatagaaaaac 40682609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 2096960 - 2097037
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcaca 169  Q
    |||||||||||| |  ||| |||||||| ||||| |||||||| ||||| || |||||||||||||||||||| ||||    
T  2096960 tatatatttaatataaaatgcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaattttcaca 2097037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 9326940 - 9326864
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaa--tttgcacattatagaaaaacc 182  Q
    |||||||||||| ||| ||||||||   ||||||||||||||||||||||||||  ||||||||| ||||| |||||    
T  9326940 aatacacaagttccaagataaacttgtcattttaaatttcttaacatgtgcaaatttttgcacatgatagagaaacc 9326864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 9373662 - 9373586
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaa--tttgcacattatagaaaaacc 182  Q
    |||||||||||| ||| ||||||||   ||||||||||||||||||||||||||  ||||||||| ||||| |||||    
T  9373662 aatacacaagttccaagataaacttgtcattttaaatttcttaacatgtgcaaatttttgcacatgatagagaaacc 9373586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 9381974 - 9381898
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaa--tttgcacattatagaaaaacc 182  Q
    |||||||||||| ||| ||||||||   ||||||||||||||||||||||||||  ||||||||| ||||| |||||    
T  9381974 aatacacaagttccaagataaacttgtcattttaaatttcttaacatgtgcaaatttttgcacatgatagagaaacc 9381898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 34941388 - 34941457
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||| ||||  ||| ||||||||||||| |||||| |||||||||||| |||||| |||||||||||    
T  34941388 acaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaattcgcacatgatagaaaaacc 34941457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 3085801 - 3085849
Alignment:
Q  134 ctattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  3085801 ctattttaaacttcttaaaatgtgcaaatttgcacatgatagaaaaacc 3085849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 27756666 - 27756742
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    |||| ||||||||||| | |||||| ||| ||||||||||||||||| || ||||||| |||| ||| |||||||||    
T  27756666 aatatacaagtttcaagacaaacttgctactttaaatttcttaacatttgtaaatttgtacatgataaaaaaacctt 27756742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 42479934 - 42479894
Alignment:
Q  139 ttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  42479934 ttaaatttcttaacatgtgcaaatttgcacatgatagaaaa 42479894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 44916690 - 44916642
Alignment:
Q  134 ctattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  44916690 ctattttaaattttttaatatgtgcaaatttgcacatgatagaaaaacc 44916642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 181
Target Start/End: Original strand, 23545567 - 23545654
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||| || |||  |||| || ||||| ||| ||  ||||||||| || ||||||||||||||||||||||| ||||||||||    
T  23545567 tatatttaatattaaatgtacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaatttgcacatgatagaaaaac 23545654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 47326935 - 47326892
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  47326935 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 47326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 47341731 - 47341688
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||||||||||||||||||||||| ||||||||||    
T  47341731 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 47341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 49228782 - 49228833
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| ||||||||| |||||||||||||||| |||||||||||    
T  49228782 ttactaatttaaacttcttaacacgtgcaaatttgcacatgatagaaaaacc 49228833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 49332962 - 49333005
Alignment:
Q  127 aaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  49332962 aaacttactatttaaaattttttaacatgtgcaaatttgcacat 49333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 23553693 - 23553747
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||| |||||| |||||| || ||||||||||||||||||||||| |||||||||    
T  23553693 taaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 23553747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 182
Target Start/End: Complemental strand, 53376477 - 53376407
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| |||| |||| ||||||  ||||||||| |||||||||||||||||||| ||||| ||| |||||||    
T  53376477 cacaggttttaatacaaacttcttattttaaacttcttaacatgtgcaaattttcacatgataaaaaaacc 53376407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 53961450 - 53961500
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||| |||||| |||||||||||||||||||||||||  ||||||||||    
T  53961450 ttactaatttaaacttcttaacatgtgcaaatttgcacacgatagaaaaac 53961500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 4779477 - 4779436
Alignment:
Q  140 taaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  4779477 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 4779436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 13214452 - 13214415
Alignment:
Q  145 ttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||||||||||||| |||||||||||    
T  13214452 ttcttaacatgtgcaaatttgcacataatagaaaaacc 13214415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 8736854 - 8736810
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||    
T  8736854 tttaaatttcttaacatgtgcaaatttacacacgatagaaaaacc 8736810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 4329722 - 4329773
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| || ||||||| ||||||||||||||| |||||||||||    
T  4329722 ttactactttaaactttttaacatatgcaaatttgcacatgatagaaaaacc 4329773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 16069294 - 16069203
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctta 185  Q
    |||||||||| || |||  |||| |||||||| |||  | |||||| ||| ||||||||||||||||||||||| || | ||| ||||||||    
T  16069294 tatatttaatattaaatgtacaaatttcaatacaaaaattctatttaaaacttcttaacatgtgcaaatttgcatatgacagataaacctta 16069203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 180
Target Start/End: Original strand, 55813974 - 55814041
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||| |||||||| ||| ||| ||||||||| || |||||||||||||||||||| || ||| |||||    
T  55813974 acaaatttcaatacaaaattattattttaaactttttaacatgtgcaaatttgcatatgatacaaaaa 55814041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 32279199 - 32279249
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||| || ||||||||||||||||| ||||| ||| ||||||    
T  32279199 ttactattttaaactttttaacatgtgcaaatttacacatgataaaaaaac 32279249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 165
Target Start/End: Complemental strand, 41488768 - 41488734
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttg 165  Q
    |||| ||||||||||||||||||||||||||||||    
T  41488768 ttacaattttaaatttcttaacatgtgcaaatttg 41488734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 48910857 - 48910803
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||| |||||| |||||| |||||||||| |||||||||||| || |||||||||    
T  48910857 taaagttactactttaaacttcttaacatatgcaaatttgcatatgatagaaaaa 48910803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 10097689 - 10097738
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||| ||| |||| ||||| ||||||||| |||||||||||||||    
T  10097689 ttactatttaaaacttctaaacatatgcaaatttacacattatagaaaaa 10097738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 10389318 - 10389269
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||| || |||||| ||||||||||||||||| ||||||||| |||||    
T  10389318 ttactacttgaaattttttaacatgtgcaaatttacacattataaaaaaa 10389269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 24297482 - 24297551
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| ||| |||||||| ||  ||||||||  |||||||||||||||||||| ||||| ||| |||||||    
T  24297482 acaaattttaatataaattttttattttaatcttcttaacatgtgcaaatttacacatcataaaaaaacc 24297551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 22130684 - 22130728
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    ||||||||| || |||||||||| |||||||||||| ||||||||    
T  22130684 tattttaaactttttaacatgtgtaaatttgcacataatagaaaa 22130728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 37784929 - 37784877
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    ||||| || ||||||||| |||||||||| || |||||||||||| |||||||    
T  37784929 cacaaattacaatataaatttactattttgaacttcttaacatgtccaaattt 37784877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 4e-42; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 42589179 - 42589349
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         |||||||||||||||    
T  42589179 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatatatattt 42589269  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  42589270 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 42589349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 44012932 - 44013102
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         |||||||||||||||    
T  44012932 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatatatattt 44013022  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  44013023 aatgtaaaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 44013102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 9661903 - 9662073
Alignment:
Q  1 ctaacatgtgcaaatttacacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatattt 100  Q
    ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||         ||||||| |||||||    
T  9661903 ctaacatgtgcaaatttgcacatgttaaggatactaaaagaagcaactttttattgaaaatcacacttgttataaa---------aaagaatgtatattt 9661993  T
Q  101 aatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||  |||||||||||| |||||||||||||||| ||||   | ||||||||||||||||||||||||  ||||||||    
T  9661994 aatgtagaatacacaagttccaatataaacttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaa 9662073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 4249231 - 4249385
Alignment:
Q  19 cacatgttaaagatattaaaagaagcaactttttattgaaaatcacagttgttattaaaaagaatataaagaatatatatttaatgttcaatacacaagt 118  Q
    |||||||||| |||| |||||||||| ||||||||||||||| ||  |||||||||||||  |||        ||||||||||||||  |||||||||||    
T  4249231 cacatgttaaggatactaaaagaagcgactttttattgaaaaccatggttgttattaaaat-aat--------tatatatttaatgtaaaatacacaagt 4249321  T
Q  119 ttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||  | |||||| || ||||||||||| |||||||||||  ||||||||||    
T  4249322 ttcaatataaacttaaaactttaaacttattaacatgtgcgaatttgcacatgttagaaaaacc 4249385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 6180277 - 6180365
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  6180277 tatatttaatattaaatgtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 6180365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 114 - 182
Target Start/End: Complemental strand, 23576481 - 23576413
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23576481 caagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 23576413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 35438804 - 35438892
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  ||||||||| ||  || |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  35438804 tatatatttaatataaaatacacaaattataagataaacttaccattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 38812831 - 38812919
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||||||||||||| || ||||||| || |||||||||||||||||||||||||| |||||||||||    
T  38812831 tatatttaatattaaatgtacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 38812919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 51920518 - 51920431
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||||||||| || |||| |||| ||| |||||||| || ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  51920518 tatatttaatattaaatatacaaattttaatataaaatttctattttaaatttattaacatgtgcaaatttgcacatgatagaaaaac 51920431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 4249619 - 4249709
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||||  ||||||||||||||||||||||||||  | |||||| || ||||||||||| |||||||||||  ||||||||||    
T  4249619 tatatatttaatgtaaaatacacaagtttcaatataaacttaaaactttaaacttattaacatgtgcgaatttgcacatgttagaaaaacc 4249709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 4249943 - 4250033
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||||  ||||||||||||||||||||||||||  | |||||| || ||||||||||| |||||||||||  ||||||||||    
T  4249943 tatatatttaatgtaaaatacacaagtttcaatataaacttaaaactttaaacttattaacatgtgcgaatttgcacatgttagaaaaacc 4250033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 9516670 - 9516758
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  ||||||||||||  || | |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  9516670 tatatatttaatataaaatacacaagttataagagaaacttaccattttaaatttcttaacatgtgcaaatttacacatgatagaaaaa 9516758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 13241846 - 13241934
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  |||||||||||| ||  | |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  13241846 tatatatttaatatgaaatacacaagttacacgacaaacttaccattttaaatttcttaacatgtgcaaattttcacatgatagaaaaa 13241934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 35512836 - 35512904
Alignment:
Q  114 caagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||||||||| || |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  35512836 caagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 35512904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 1502770 - 1502719
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1502770 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacc 1502719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 13321967 - 13322061
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttattt 188  Q
    |||||||||| || |||  |||| || ||||| ||| || |||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  13321967 tatatttaatattaaatgtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatttgcacatgatagaaaaaccttattt 13322061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 41676629 - 41676561
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||| |||| ||| ||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  41676629 cacaagttttaatacaaaattattattttgaatttcttaacatgtgcaaatttgcacatgatagaaaaa 41676561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 313857 - 313928
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||  |||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  313857 acacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 313928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 6570055 - 6569984
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||  |||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  6570055 acacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 6569984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 25465267 - 25465342
Alignment:
Q  112 cacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatt 187  Q
    |||||||| ||||  ||| |||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||    
T  25465267 cacaagttccaatgcaaatttactattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatt 25465342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 39310846 - 39310776
Alignment:
Q  121 caatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatttatt 191  Q
    ||||| ||| || |||||||||| || ||||||||||||||||||||||| ||||||||||| ||||||||    
T  39310846 caatacaaaatttctattttaaactttttaacatgtgcaaatttgcacatgatagaaaaaccctatttatt 39310776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 29635821 - 29635748
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||||| |||||||  | || ||||||||||    
T  29635821 aatatacaagtttcaatataaagttactattttaaattttttaacatgtacaaatttataaatgatagaaaaac 29635748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 30288934 - 30288861
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    ||||||||| |||  |||| |||||| |||||| ||||||||||||| |||||||||||| |||||||||||||    
T  30288934 acacaagttccaagttaaaattactactttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacctt 30288861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 182
Target Start/End: Original strand, 36490889 - 36490958
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||| ||||  ||| ||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  36490889 acaagttccaatgcaaagttactattttaaacttcttaacatgtgcaaatttgctcatgatagaaaaacc 36490958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Original strand, 1366165 - 1366225
Alignment:
Q  121 caatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||| ||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  1366165 caatacaaaattactattttaaatttctttacatgtgtaaatttgcacatgatagaaaaac 1366225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 20357359 - 20357451
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    ||||||||||||||  ||||||||||||  || | ||||||||||| |||||| | |||||||||| ||||||| |||| |||||| ||||||    
T  20357359 tatatatttaatgtaaaatacacaagttctaaaacaaacttactatcttaaatattttaacatgtgtaaatttgtacatgatagaacaacctt 20357451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 20562596 - 20562504
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    ||||||||||||||  ||||||||||||  || | ||||||||||| |||||| | |||||||||| ||||||| |||| |||||| ||||||    
T  20562596 tatatatttaatgtaaaatacacaagttctaaaacaaacttactatcttaaatattttaacatgtgtaaatttgtacatgatagaacaacctt 20562504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 22167426 - 22167514
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| ||| || |||||||||| |||||| ||||||||||||||||||| |||| ||||||    
T  22167426 tatatttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatgataggaaaacc 22167514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 44918147 - 44918203
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| |||||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  44918147 taaagttactactttaaatttcttaacatgtgtaaatttgcacatgatagaaaaacc 44918203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 30363045 - 30362994
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  30363045 ttactattttaaatttgttatcatgtgcaaatttgcacatgatagaaaaacc 30362994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 34802095 - 34802146
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  34802095 ttaccattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 34802146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 5875262 - 5875216
Alignment:
Q  134 ctattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  5875262 ctattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 5875216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 23591830 - 23591876
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  23591830 tatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 23591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 190
Target Start/End: Original strand, 4607585 - 4607662
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaaccttatttat 190  Q
    ||||||| ||||| ||| || ||||| ||||||||||||||| || ||||||| |||| ||||||||||||| |||||    
T  4607585 acaagttccaatacaaaatttctattataaatttcttaacatatgtaaatttgtacatgatagaaaaaccttttttat 4607662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 24669016 - 24669088
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    |||||||||||| |  ||| || |||||  |||||||| ||||||||||||| ||||||||||||||||||||    
T  24669016 tatatatttaatataaaatgcataagttataatataaatttactattttaaacttcttaacatgtgcaaattt 24669088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 30172014 - 30172058
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  30172014 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 30172058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 30187555 - 30187599
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  30187555 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 30187599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 49392186 - 49392242
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    |||||||| ||||||||| |||| ||||| ||||||||| |||||||||||||||||    
T  49392186 aatacacatgtttcaatacaaacatactactttaaattttttaacatgtgcaaattt 49392242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 51382446 - 51382502
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa-ccttatttat 190  Q
    ||||||||| ||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  51382446 tattttaaacttcttaacatgtgcaaagttgcacatgatagaaaaacccttatttat 51382502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 6754599 - 6754650
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  6754599 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 6754650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 39150377 - 39150326
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  39150377 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 39150326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 2222307 - 2222236
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||| || ||||| ||| ||||  ||||||||||||||||| |||||| ||||| ||||||||||    
T  2222307 aatacacaagttttaagataaagttattatt--aaatttcttaacatgtgtaaattttcacatgatagaaaaac 2222236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 6307607 - 6307681
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||| |||   |||| || || |||||| |||||||||||||||||||||||||| ||| |||||||    
T  6307607 aatacacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcacatgatataaaaacc 6307681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 10896476 - 10896534
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    |||| |||||| |||||| |||||||||||||||| ||| ||||| |||||||||||||    
T  10896476 taaagttactactttaaacttcttaacatgtgcaattttacacatgatagaaaaacctt 10896534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 3168155 - 3168067
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaata-taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||| || |||  ||||||| ||||| |||| || |||||||||| || ||||| ||||||||||||||||| |||||||||||    
T  3168155 tatatttaatattaaatgtacaagttccaatactaaaatt-ctattttaaactttttaacgtgtgcaaatttgcacatgatagaaaaacc 3168067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 19277909 - 19277958
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||| |||| |||||||  ||||||||||||||||||||||    
T  19277909 ttactattttaaacttctgaacatgttaaaatttgcacattatagaaaaa 19277958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 28016290 - 28016347
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    ||||||| ||||| ||| ||  ||||||||| ||||||||||||||||||||||||||    
T  28016290 acaagttccaatacaaaatttatattttaaaattcttaacatgtgcaaatttgcacat 28016347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 32201756 - 32201801
Alignment:
Q  135 tattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||    
T  32201756 tattttaaacttcttaatatgtgcaaatttgcacataatagaaaaa 32201801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 39930869 - 39930812
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    |||||||||||  |||| |||||| |||||| |||||| |||||||||||||||||||    
T  39930869 acaagtttcaagttaaagttactactttaaacttcttatcatgtgcaaatttgcacat 39930812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 92 - 180
Target Start/End: Original strand, 43909282 - 43909368
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||| |  ||||||||||||  || | |||||||| |||| |||||| ||||  ||||||||||||||||| |||||||||    
T  43909282 tatatatttaatataaaatacacaagttataagacaaacttaccatttaaaattttttaa--tgtgcaaatttgcacatgatagaaaaa 43909368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 156
Target Start/End: Original strand, 51467545 - 51467606
Alignment:
Q  95 atatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgt 156  Q
    ||||||||| || |||  ||||||| ||||| |||||| |||||||||||||||||||||||    
T  51467545 atatttaatattaaatgtacaagttccaatacaaacttcctattttaaatttcttaacatgt 51467606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 3096344 - 3096388
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||    
T  3096344 tttaaattttttatcatgtgcaaatttgcacataatagaaaaacc 3096388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 5879150 - 5879102
Alignment:
Q  134 ctattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| ||| |||||||||||||||||||| ||||| |||||||||||    
T  5879150 ctatttcaaacttcttaacatgtgcaaatttacacatgatagaaaaacc 5879102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 47355446 - 47355378
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||| ||||| ||| ||| ||||||||||||||||||||||| ||||||  || | ||||||||||    
T  47355446 acaagttccaatacaaatttattattttaaatttcttaacatgtgtaaatttatacgtgatagaaaaac 47355378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 48085906 - 48085862
Alignment:
Q  136 attttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||||||||||||||||||||| | || |||||||||    
T  48085906 attttaaatttcttaacatgtgcaaatttgtagataatagaaaaa 48085862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 16966500 - 16966543
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||    
T  16966500 tttaaatttcttaacatgttcaaatatgcacatgatagaaaaac 16966543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 17919581 - 17919632
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| ||||||  |||||||||||||||||| |||||||||||    
T  17919581 ttactactttaaacttcttattatgtgcaaatttgcacatgatagaaaaacc 17919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 26767524 - 26767470
Alignment:
Q  127 aaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||| |||||||||| ||||||| ||||||||||||| | |||||||||||    
T  26767524 aaacttacttttttaaattt-ttaacatttgcaaatttgcacgtgatagaaaaacc 26767470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 41624957 - 41625008
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||| ||| ||||||||||||||| |||||||||||    
T  41624957 ttactactttaaacttcttatcatatgcaaatttgcacatgatagaaaaacc 41625008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 33048174 - 33048124
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||| ||||||| ||||| |||||| ||||| ||||||||||    
T  33048174 ttactattttaaacttcttaatatgtgtaaattttcacatcatagaaaaac 33048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 43317582 - 43317640
Alignment:
Q  122 aatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||  |||||||| ||||||||||||| ||||||| |||| || ||||||    
T  43317582 aatataaacttataattttaaacttcttaacatgtgtaaatttgtacatgattgaaaaa 43317640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 8062293 - 8062370
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcaca 169  Q
    |||||||||||| |  || ||| || ||||||  |||| |||||| |||||| || ||||||||||||||||||||||    
T  8062293 tatatatttaatataaaaaacataaatttcaaattaaagttactactttaaactttttaacatgtgcaaatttgcaca 8062370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 43286412 - 43286355
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttctt 149  Q
    |||||||||||  |  ||||||||||||| |||||||| ||| |||||||||||||||    
T  43286412 tatatatttaagataaaatacacaagttttaatataaatttattattttaaatttctt 43286355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 281067 - 281139
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||  || | |||||||  ||||||||||| ||||||| |||||||||  |||| |||||||||    
T  281067 aatacacaagttgtaagacaaacttatcattttaaattttttaacatatgcaaatttcaacatgatagaaaaa 281139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 21036720 - 21036808
Alignment:
Q  94 tatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||| |||| || |||| ||||||||||||||||| ||  ||||||||| || |||| ||||| |||||||   || |||||||||||    
T  21036720 tatatataatattaaatatacaagtttcaatataaaatttttattttaaagtttttaatatgtgtaaatttgatgatgatagaaaaacc 21036808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 30107208 - 30107137
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||| ||| || | ||||||| |||||| |||||  |||||||||||||||| | |||||||||||||    
T  30107208 aatacacaaattttaaaacaaacttattattttgaattttctaacatgtgcaaatttac-cattatagaaaaa 30107137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 38539189 - 38539245
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    |||| |||| ||| || |||||||| | | |||||||||||||||||||||||||||    
T  38539189 aatatacaaattttaagataaacttgccactttaaatttcttaacatgtgcaaattt 38539245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 38561407 - 38561463
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaattt 164  Q
    |||| |||| ||| || |||||||| | | |||||||||||||||||||||||||||    
T  38561407 aatatacaaattttaagataaacttgccactttaaatttcttaacatgtgcaaattt 38561463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 13636 - 13564
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||||||||  |||||||||| |||||| ||||||||||||||||||||||||||  ||||||||    
T  13636 aatacacaagtttcaatgcaaacttactaatttaaacttcttaacatgtgcaaatttgcacatattagaaaaa 13564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 13208 - 13266
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  13208 taaagttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacctt 13266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 17856 - 17788
Alignment:
Q  113 acaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||| ||||||||| |||||||||| || ||  ||||||||||||||||||| |||||||||||||    
T  17856 acaagttccaatataaagttactatttttaacttaataacatgtgcaaatttgcaaattatagaaaaac 17788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 24587 - 24527
Alignment:
Q  121 caatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||| ||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  24587 caatacaaaattactattttaaatttctttacatgtgtaaatttgcacatgatagaaaaac 24527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 158913 - 159005
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacctt 184  Q
    ||||||||||||||  ||||||||||||| || | | ||||||||| |||||| | |||||||||| ||||||| |||| |||||| ||||||    
T  158913 tatatatttaatgtaaaatacacaagttttaaaacatacttactatcttaaatattttaacatgtgtaaatttgtacatgatagaacaacctt 159005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 52829 - 52778
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  52829 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 52778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 145805 - 145856
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  145805 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 22597 - 22641
Alignment:
Q  136 attttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  22597 attttaaatttcttaacatgtgcaaatttgtacataatagaaaaa 22641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 37157 - 37113
Alignment:
Q  138 tttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  37157 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 37113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 41094 - 41160
Alignment:
Q  115 aagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||| ||| ||| ||||||||| |||||||||| | ||||||| ||||| ||||||||||    
T  41094 aagtttcaatacaaaattattattttaaacttcttaacatatacaaatttacacatgatagaaaaac 41160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 191360 - 191316
Alignment:
Q  136 attttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||    
T  191360 attttaaatttcttaacatgtgcaaatttgcacataataaaaaaa 191316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 1532 - 1445
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||||||||| |  |||  |||| ||| || ||||| ||||| ||||||| |||||||||||||||||||||||||| ||| ||||    
T  1532 tatatatttaatataaaatgaacaaattttaagataaaattactcttttaaacttcttaacatgtgcaaatttgcacatgataaaaaa 1445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 182151 - 182221
Alignment:
Q  111 acacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||||||||||| || ||| ||||| |||||| |||||||||||| ||||||| ||||| |||||||||||    
T  182151 acacaagtttcaa-atcaacgtactactttaaacttcttaacatgtacaaatttacacatgatagaaaaacc 182221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 5814 - 5868
Alignment:
Q  126 taaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||| |||||| |||||| || ||||||||||||||||||||||| |||||||||    
T  5814 taaagttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 5868  T

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Target: scaffold0128 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 44367 - 44293
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||| ||||||||||||  ||| ||  ||||||||| || |||| |||||||||||||||||| |||||||||||    
T  44367 aatatacaagtttcaatgcaaagttgttattttaaactttttaatatgtgcaaatttgcacatgatagaaaaacc 44293  T

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Target: scaffold0073 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 16608 - 16534
Alignment:
Q  108 aatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    |||||||||||| |||   |||| || || |||||| |||||||||||||||||||||||||| ||| |||||||    
T  16608 aatacacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatttgcacatgatataaaaacc 16534  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 94084 - 94018
Alignment:
Q  115 aagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||| |||| |||| ||| ||||| ||| |||||||||| ||||||||||||||| ||||||||||    
T  94084 aagttccaatgtaaagttagtatttaaaacttcttaacatatgcaaatttgcacatgatagaaaaac 94018  T

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Target: scaffold0631 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 557 - 601
Alignment:
Q  136 attttaaatttcttaacatgtgcaaatttgcacattatagaaaaa 180  Q
    |||||||||||||||||||||||||||||| | || |||||||||    
T  557 attttaaatttcttaacatgtgcaaatttgtagataatagaaaaa 601  T

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Target: scaffold0618 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 8464 - 8416
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaa 179  Q
    |||||| ||||||||||||||||| ||||||||| ||||| ||||||||    
T  8464 ttactactttaaatttcttaacatatgcaaatttacacatgatagaaaa 8416  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 3479 - 3412
Alignment:
Q  115 aagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaacc 182  Q
    ||||| |||| |||| | |||| |||||| ||||||| |||||||||||| ||||| |||||||||||    
T  3479 aagttccaatttaaagtaactactttaaacttcttaatatgtgcaaatttacacatgatagaaaaacc 3412  T

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Target: scaffold0503 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 9176 - 9098
Alignment:
Q  92 tatatatttaatgttcaatacacaagtttcaatataaacttactattttaaatttcttaacatgtgcaaatttgcacat 170  Q
    |||| |||||||||  |||||||| ||| ||| |||||||||||||||| || |||||| |||| | |||||| |||||    
T  9176 tatacatttaatgtaaaatacacatgttccaaaataaacttactattttgaacttcttatcatgggtaaattttcacat 9098  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 45547 - 45497
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||||||||||| ||||| |||| || |||||||||||| ||||||||||    
T  45547 ttactattttaaacttctttacatatgtaaatttgcacatgatagaaaaac 45497  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 2498 - 2448
Alignment:
Q  131 ttactattttaaatttcttaacatgtgcaaatttgcacattatagaaaaac 181  Q
    ||||| ||||||| ||||| |||| ||||||||||||||| ||||||||||    
T  2498 ttacttttttaaaattcttgacatatgcaaatttgcacatgatagaaaaac 2448  T

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