View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20314_high_25 (Length: 320)

Name: NF20314_high_25
Description: NF20314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20314_high_25
NF20314_high_25
[»] chr8 (1 HSPs)
chr8 (13-304)||(29016742-29017033)


Alignment Details
Target: chr8 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 13 - 304
Target Start/End: Complemental strand, 29017033 - 29016742
Alignment:
Q  13 taggtcatgcttaagatatggtaaatgtcgtatcttagatgtgttaagagtcaaacatcgaatgagctatctacatcatccaaattacatatcttggttg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29017033 taggtcatgcttaagatatggtaaatgtcgtatcttagatgtgttaagagtcaaacatcgaatgagctatctacatcatccaaattacatatcttggttg 29016934  T
Q  113 ttagatgattatcggacgactcgtattcctattttattagttgagaatatgagtcgtccagatttcaatcattgttagatacataaatggtcaaatctaa 212  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29016933 ttagatgattatcggacgactcttattcctattttattagttgagaatatgagtcgtccagatttcaatcattgttggatacataaatggtcaaatctaa 29016834  T
Q  213 caggaaagtttggttggaggaggctgaagggaaaactactagcaataaaacttaacttctagtgggtcagcctgcacctaaaccaggaaaat 304  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29016833 caggaaagtttggttggaggaggctggagggaaaactactagcaataaaacttaacttctagtgggtcagcctgcacctaaaccaggaaaat 29016742  T

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