View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20314_high_35 (Length: 227)
Name: NF20314_high_35
Description: NF20314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20314_high_35 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 212
Target Start/End: Complemental strand, 3654756 - 3654560
Alignment:
| Q |
16 |
aatatagggttgggttgtgagataaataaattaaatatgctaataattatttcaatcacggttggaactcaagtcttttcaaacaaattcttatgtgtat |
115 |
Q |
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| T |
3654756 |
aatatagggttgggttgtgagataaataaattaaatatgctaataattatttcaatcactgtttgaactcaagtcttttcaaacaaattcttatgtgtat |
3654657 |
T |
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| Q |
116 |
atgttacctaaatataaaatacaataaattaaaaatggattgaaatccatgtctatcttcatacacgaggtacttctatgttcgaaatagacaaaac |
212 |
Q |
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| T |
3654656 |
atgttacctaaatataaaatacaataaattaaaaattgattgaaatccatgtctatcttcatacacgaggtacttctatgttcgaaatagacaaaac |
3654560 |
T |
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