View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20314_low_11 (Length: 431)
Name: NF20314_low_11
Description: NF20314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20314_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 364; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 14 - 413
Target Start/End: Original strand, 34101388 - 34101787
Alignment:
| Q |
14 |
atgaagaagatgaaaaactacttccacgtgtacacgatttccaaacttaacgattttgcgaaaccgttacttcaagcacagattcctcacaatctccata |
113 |
Q |
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| T |
34101388 |
atgaagaagatgaaaaactacttccacgtgtacacgatttccaaacttgacgattttgcgaaatcgttacttcaagcacagattccttacaatctccaca |
34101487 |
T |
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| Q |
114 |
ttgtgatggatcatgaaatcaaggagcgtctctgcttagagatcaacactctcaacctcagcgcgcttatcgttggaagggggcgagtattgcgttcgcc |
213 |
Q |
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| T |
34101488 |
ttgtgatggatcatgaaatcaaggagcgtctctgcttagagatcaacagtctcaacctcagcgcgcttatcgttggaagggggcgagtattgcgttcgcc |
34101587 |
T |
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| Q |
214 |
attgcaaatgtcctgttgttgttgttggaagttctgatgaaacggacggtggagatttgatttccactacaaactccggtgttggaagattcgctgaaaa |
313 |
Q |
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| T |
34101588 |
attgcgaatgtcctgttggtgttgtgggaagttctgatgaaacggacggtggagatttgatttccactgcaaactccggtgttggaagattcgctgaaaa |
34101687 |
T |
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| Q |
314 |
ttctacggctaattctgttttgccaccgccgaaagaaacatatgtggaagaaattgatgatatgttgcagaaatataacgaaggtttacttagcagaggt |
413 |
Q |
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| T |
34101688 |
ttctacggctaattctgttttgccaccgccgaaagaaacatatgtggaagaaattgatgatatgttgcagaaatataacgaaggtttacttagcagaggt |
34101787 |
T |
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