View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20315_high_26 (Length: 236)
Name: NF20315_high_26
Description: NF20315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20315_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 33275969 - 33276181
Alignment:
| Q |
1 |
ttatcataacccaaacacaaacatgagtgctgtgaatcttaacacatggacacactccaatttcatgtgcaatcaagttactactactgctacaactaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33275969 |
ttatcataacccaaacacaaacatgagtgctgtgaatcttaacacatggacacactccaatttcatgtgcaatcaagttactactactgctacaactaga |
33276068 |
T |
|
| Q |
101 |
tccagatccagaatcccatctttctattttaccaaaatacccatttcagtttcacccattaaaccatcaaaacccaattcttcttcattttctttctctg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33276069 |
tccagatccagaatcccatctttctattttaccaaaatacccatttcagtttcacccattaaaccatcaaaacccaattcttcttcattttctttctctg |
33276168 |
T |
|
| Q |
201 |
tttcatcattact |
213 |
Q |
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|||| |||||||| |
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| T |
33276169 |
tttcttcattact |
33276181 |
T |
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