View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20315_high_28 (Length: 227)

Name: NF20315_high_28
Description: NF20315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20315_high_28
NF20315_high_28
[»] chr4 (51 HSPs)
chr4 (2-221)||(2088598-2088814)
chr4 (79-221)||(16178615-16178754)
chr4 (105-221)||(13069972-13070087)
chr4 (107-221)||(37315594-37315705)
chr4 (107-195)||(39016720-39016808)
chr4 (145-221)||(42862494-42862570)
chr4 (107-219)||(44832496-44832608)
chr4 (107-222)||(30866967-30867082)
chr4 (84-221)||(20225356-20225490)
chr4 (91-221)||(40812068-40812198)
chr4 (107-216)||(51206079-51206188)
chr4 (105-197)||(2187847-2187938)
chr4 (143-221)||(8108987-8109065)
chr4 (143-213)||(43771165-43771235)
chr4 (107-221)||(47237776-47237890)
chr4 (143-221)||(50571895-50571973)
chr4 (142-195)||(25719183-25719236)
chr4 (143-209)||(39471200-39471266)
chr4 (143-192)||(24834638-24834687)
chr4 (149-197)||(19447186-19447234)
chr4 (84-195)||(28304030-28304139)
chr4 (145-221)||(34129473-34129549)
chr4 (133-213)||(41278679-41278759)
chr4 (143-221)||(20454571-20454647)
chr4 (83-138)||(51206057-51206112)
chr4 (143-221)||(722188-722266)
chr4 (84-134)||(5027408-5027458)
chr4 (143-193)||(48339411-48339461)
chr4 (143-217)||(49077284-49077358)
chr4 (143-221)||(50164426-50164504)
chr4 (112-188)||(5545642-5545718)
chr4 (149-193)||(33996012-33996056)
chr4 (143-195)||(49242227-49242279)
chr4 (148-195)||(22542438-22542485)
chr4 (150-221)||(22592335-22592406)
chr4 (153-219)||(29699522-29699588)
chr4 (91-220)||(52671862-52671988)
chr4 (82-111)||(8109108-8109137)
chr4 (144-193)||(21776917-21776966)
chr4 (146-195)||(45311022-45311071)
chr4 (143-195)||(4138922-4138974)
chr4 (82-110)||(11895191-11895219)
chr4 (84-116)||(19447279-19447311)
chr4 (79-111)||(20225489-20225521)
chr4 (143-195)||(26361379-26361431)
chr4 (143-195)||(31250954-31251006)
chr4 (143-195)||(35179666-35179717)
chr4 (143-219)||(47009222-47009298)
chr4 (79-111)||(47237891-47237923)
chr4 (143-195)||(49682862-49682914)
chr4 (105-181)||(49738957-49739033)
[»] chr1 (55 HSPs)
chr1 (82-221)||(41918026-41918165)
chr1 (107-221)||(11135770-11135884)
chr1 (131-219)||(11430474-11430562)
chr1 (105-221)||(14094034-14094150)
chr1 (105-216)||(13388370-13388483)
chr1 (131-221)||(32848642-32848732)
chr1 (107-221)||(41095644-41095758)
chr1 (105-195)||(24436500-24436590)
chr1 (128-221)||(44739149-44739242)
chr1 (105-212)||(30678945-30679051)
chr1 (108-221)||(28109899-28110011)
chr1 (143-221)||(2225255-2225333)
chr1 (128-221)||(4578632-4578726)
chr1 (143-217)||(22540403-22540477)
chr1 (107-221)||(50773146-50773260)
chr1 (91-195)||(45426774-45426878)
chr1 (114-193)||(29418540-29418619)
chr1 (154-221)||(43851117-43851184)
chr1 (143-217)||(15523245-15523319)
chr1 (143-217)||(15531239-15531313)
chr1 (143-217)||(19101672-19101746)
chr1 (147-221)||(24911494-24911568)
chr1 (143-217)||(28218119-28218193)
chr1 (143-221)||(41958114-41958192)
chr1 (144-221)||(13114742-13114819)
chr1 (81-138)||(13388450-13388507)
chr1 (133-197)||(5848100-5848164)
chr1 (141-205)||(8899061-8899125)
chr1 (154-214)||(50539162-50539222)
chr1 (164-215)||(9165339-9165390)
chr1 (154-221)||(32211866-32211933)
chr1 (143-193)||(3872705-3872755)
chr1 (147-221)||(6133699-6133773)
chr1 (143-193)||(33114030-33114080)
chr1 (143-195)||(10659839-10659891)
chr1 (79-111)||(13889296-13889328)
chr1 (82-193)||(29673534-29673642)
chr1 (143-195)||(33193107-33193159)
chr1 (143-195)||(36566953-36567005)
chr1 (143-195)||(44271975-44272027)
chr1 (105-221)||(50424899-50425015)
chr1 (118-217)||(1093120-1093218)
chr1 (144-214)||(15660931-15661001)
chr1 (149-195)||(26980339-26980385)
chr1 (82-111)||(28218045-28218074)
chr1 (118-187)||(37525594-37525662)
chr1 (128-173)||(43832348-43832393)
chr1 (144-193)||(45179318-45179367)
chr1 (82-135)||(50308861-50308914)
chr1 (147-195)||(8741298-8741346)
chr1 (79-111)||(11135737-11135769)
chr1 (143-195)||(11987683-11987735)
chr1 (79-111)||(32848733-32848765)
chr1 (79-111)||(39019573-39019605)
chr1 (79-111)||(44739116-44739148)
[»] chr7 (43 HSPs)
chr7 (82-221)||(17354538-17354676)
chr7 (110-221)||(22786182-22786293)
chr7 (105-221)||(19494372-19494488)
chr7 (107-221)||(26703475-26703589)
chr7 (105-197)||(45909511-45909603)
chr7 (107-221)||(13919811-13919925)
chr7 (107-213)||(25428514-25428620)
chr7 (107-217)||(19840920-19841030)
chr7 (111-218)||(14759677-14759784)
chr7 (79-177)||(26459068-26459164)
chr7 (143-221)||(22189970-22190048)
chr7 (143-222)||(33008134-33008213)
chr7 (145-217)||(7775035-7775107)
chr7 (90-188)||(31959835-31959933)
chr7 (82-221)||(31502479-31502613)
chr7 (144-221)||(11824102-11824179)
chr7 (105-193)||(26189962-26190050)
chr7 (143-193)||(27888341-27888391)
chr7 (108-213)||(32205115-32205219)
chr7 (142-195)||(46067995-46068048)
chr7 (144-195)||(11692236-11692287)
chr7 (116-197)||(10619437-10619517)
chr7 (144-221)||(24539195-24539272)
chr7 (154-218)||(8073370-8073434)
chr7 (143-195)||(12271043-12271094)
chr7 (143-195)||(25686906-25686958)
chr7 (144-195)||(14795188-14795239)
chr7 (144-195)||(15242180-15242231)
chr7 (79-138)||(19840996-19841055)
chr7 (128-179)||(21963186-21963237)
chr7 (147-221)||(17813850-17813923)
chr7 (143-221)||(44511007-44511085)
chr7 (143-221)||(46517322-46517400)
chr7 (143-192)||(12263507-12263556)
chr7 (144-221)||(17749725-17749802)
chr7 (82-111)||(27949425-27949454)
chr7 (116-197)||(34280977-34281058)
chr7 (79-111)||(2520740-2520772)
chr7 (143-195)||(6442222-6442274)
chr7 (79-111)||(10619541-10619573)
chr7 (79-111)||(14759796-14759828)
chr7 (79-111)||(22786149-22786181)
chr7 (79-111)||(32205077-32205109)
[»] chr5 (33 HSPs)
chr5 (107-221)||(42224626-42224740)
chr5 (107-216)||(24915091-24915200)
chr5 (105-221)||(40971486-40971602)
chr5 (105-217)||(34818221-34818333)
chr5 (107-195)||(13456200-13456288)
chr5 (111-218)||(17568741-17568848)
chr5 (107-214)||(24990924-24991031)
chr5 (143-213)||(5413808-5413878)
chr5 (107-219)||(8912543-8912655)
chr5 (107-197)||(26072158-26072248)
chr5 (107-210)||(4959320-4959423)
chr5 (143-217)||(10142047-10142121)
chr5 (143-217)||(27592523-27592597)
chr5 (107-221)||(32050338-32050452)
chr5 (143-210)||(41330464-41330531)
chr5 (151-221)||(10253161-10253231)
chr5 (143-221)||(17537173-17537251)
chr5 (143-217)||(30325945-30326019)
chr5 (143-221)||(34368391-34368469)
chr5 (143-193)||(39246667-39246717)
chr5 (107-221)||(6263914-6264026)
chr5 (178-221)||(13456193-13456236)
chr5 (143-221)||(28490793-28490871)
chr5 (143-193)||(37455408-37455458)
chr5 (149-214)||(34384768-34384833)
chr5 (146-195)||(41105644-41105693)
chr5 (79-111)||(2443684-2443716)
chr5 (79-111)||(4959276-4959308)
chr5 (147-195)||(28090304-28090352)
chr5 (93-177)||(32153766-32153850)
chr5 (79-111)||(34368512-34368544)
chr5 (79-111)||(42224741-42224773)
chr5 (143-195)||(43405450-43405502)
[»] chr6 (23 HSPs)
chr6 (107-221)||(19737470-19737584)
chr6 (107-221)||(19090250-19090364)
chr6 (105-221)||(35128756-35128872)
chr6 (105-211)||(10060900-10061006)
chr6 (128-221)||(6531354-6531447)
chr6 (87-221)||(373430-373562)
chr6 (82-184)||(6992281-6992383)
chr6 (107-221)||(4595773-4595887)
chr6 (143-221)||(34905367-34905445)
chr6 (147-222)||(445848-445923)
chr6 (143-221)||(10133229-10133307)
chr6 (143-217)||(21987327-21987401)
chr6 (144-193)||(5106357-5106406)
chr6 (79-111)||(10060857-10060889)
chr6 (143-199)||(12780830-12780886)
chr6 (128-196)||(12794870-12794938)
chr6 (143-195)||(16852044-16852096)
chr6 (144-195)||(31116196-31116247)
chr6 (110-195)||(32122852-32122936)
chr6 (82-114)||(6992406-6992438)
chr6 (79-111)||(12753910-12753942)
chr6 (143-187)||(32599019-32599063)
chr6 (82-114)||(34882241-34882273)
[»] chr2 (38 HSPs)
chr2 (107-221)||(42182920-42183034)
chr2 (107-221)||(28898072-28898186)
chr2 (105-221)||(1110229-1110345)
chr2 (107-221)||(37228529-37228644)
chr2 (107-221)||(4964708-4964822)
chr2 (79-217)||(31395454-31395590)
chr2 (128-219)||(15508947-15509038)
chr2 (100-195)||(33746948-33747043)
chr2 (143-221)||(9470112-9470190)
chr2 (128-195)||(6315715-6315782)
chr2 (81-184)||(7919280-7919382)
chr2 (143-221)||(26767832-26767910)
chr2 (167-221)||(1107069-1107123)
chr2 (143-193)||(44274293-44274343)
chr2 (146-214)||(18511283-18511351)
chr2 (105-213)||(24895300-24895408)
chr2 (169-221)||(45554598-45554650)
chr2 (143-214)||(12989229-12989300)
chr2 (110-217)||(37652284-37652390)
chr2 (147-221)||(6980195-6980269)
chr2 (143-188)||(10981582-10981627)
chr2 (107-184)||(37719872-37719949)
chr2 (144-193)||(38104307-38104356)
chr2 (161-221)||(10339797-10339857)
chr2 (143-195)||(38464220-38464272)
chr2 (79-138)||(6315668-6315727)
chr2 (105-196)||(37398847-37398938)
chr2 (82-133)||(42669740-42669791)
chr2 (143-221)||(2476565-2476643)
chr2 (143-209)||(16719501-16719567)
chr2 (144-195)||(3804641-3804693)
chr2 (79-111)||(15508912-15508944)
chr2 (143-183)||(15884498-15884538)
chr2 (79-111)||(19193498-19193530)
chr2 (79-111)||(20951604-20951636)
chr2 (79-111)||(33678265-33678297)
chr2 (143-187)||(34142210-34142254)
chr2 (79-111)||(42183042-42183074)
[»] chr3 (47 HSPs)
chr3 (107-221)||(54140928-54141042)
chr3 (131-221)||(37600189-37600279)
chr3 (107-221)||(357791-357905)
chr3 (79-221)||(50661529-50661671)
chr3 (128-221)||(46237102-46237195)
chr3 (105-197)||(24748943-24749035)
chr3 (107-197)||(10769760-10769850)
chr3 (141-221)||(43657065-43657145)
chr3 (143-221)||(37776774-37776852)
chr3 (144-221)||(27243076-27243153)
chr3 (105-222)||(38928042-38928159)
chr3 (142-222)||(24734735-24734815)
chr3 (143-221)||(28529284-28529360)
chr3 (143-222)||(41451966-41452045)
chr3 (143-221)||(46450096-46450175)
chr3 (143-217)||(20791331-20791405)
chr3 (143-221)||(26310517-26310595)
chr3 (147-221)||(8825054-8825128)
chr3 (147-193)||(13809140-13809186)
chr3 (143-217)||(14236054-14236128)
chr3 (143-221)||(46160978-46161056)
chr3 (79-187)||(55452025-55452130)
chr3 (143-195)||(18427221-18427273)
chr3 (154-197)||(21232604-21232647)
chr3 (79-175)||(29775137-29775243)
chr3 (143-221)||(20493516-20493594)
chr3 (143-195)||(5452131-5452183)
chr3 (143-195)||(19345071-19345123)
chr3 (105-193)||(44844040-44844128)
chr3 (154-221)||(40715944-40716011)
chr3 (144-195)||(46576005-46576056)
chr3 (143-193)||(29588804-29588854)
chr3 (82-111)||(5452061-5452090)
chr3 (82-111)||(24734857-24734886)
chr3 (128-221)||(37926562-37926655)
chr3 (143-188)||(39186028-39186073)
chr3 (144-193)||(48351495-48351544)
chr3 (82-111)||(52123955-52123984)
chr3 (143-183)||(752461-752501)
chr3 (133-217)||(3313996-3314080)
chr3 (79-111)||(10769875-10769907)
chr3 (83-111)||(27243047-27243075)
chr3 (79-111)||(27243198-27243230)
chr3 (143-191)||(38414708-38414756)
chr3 (79-111)||(46160947-46160979)
chr3 (79-111)||(46450065-46450097)
chr3 (143-195)||(52124027-52124079)
[»] chr8 (38 HSPs)
chr8 (131-221)||(43026322-43026412)
chr8 (105-221)||(7599455-7599571)
chr8 (91-217)||(1205862-1205986)
chr8 (107-221)||(35689511-35689625)
chr8 (85-199)||(33417735-33417847)
chr8 (143-221)||(32072128-32072206)
chr8 (147-221)||(34861262-34861336)
chr8 (143-221)||(1977244-1977322)
chr8 (147-221)||(6387592-6387666)
chr8 (143-216)||(23685167-23685240)
chr8 (128-221)||(28211942-28212035)
chr8 (107-196)||(34303473-34303562)
chr8 (143-195)||(8903909-8903961)
chr8 (79-178)||(23142813-23142921)
chr8 (145-191)||(5979941-5979987)
chr8 (143-221)||(8914802-8914880)
chr8 (147-221)||(28413944-28414018)
chr8 (109-214)||(902410-902515)
chr8 (144-221)||(9952829-9952906)
chr8 (108-193)||(25915088-25915175)
chr8 (143-221)||(17499304-17499382)
chr8 (143-217)||(24055996-24056070)
chr8 (143-217)||(45246469-45246543)
chr8 (105-214)||(10197751-10197860)
chr8 (144-193)||(13407396-13407445)
chr8 (79-111)||(13407319-13407351)
chr8 (143-195)||(17716908-17716960)
chr8 (143-195)||(17741598-17741650)
chr8 (143-215)||(31301152-31301224)
chr8 (154-193)||(9192060-9192099)
chr8 (149-192)||(36804916-36804959)
chr8 (143-193)||(1961341-1961391)
chr8 (82-111)||(1961410-1961439)
chr8 (82-111)||(16983546-16983575)
chr8 (82-111)||(35151728-35151757)
chr8 (144-221)||(35797426-35797503)
chr8 (143-195)||(35151800-35151852)
chr8 (79-111)||(43506536-43506568)
[»] scaffold0054 (1 HSPs)
scaffold0054 (110-216)||(30951-31057)
[»] scaffold0018 (1 HSPs)
scaffold0018 (143-217)||(27847-27921)
[»] scaffold0099 (1 HSPs)
scaffold0099 (128-197)||(27368-27438)
[»] scaffold0543 (2 HSPs)
scaffold0543 (143-221)||(9695-9773)
scaffold0543 (79-138)||(9676-9733)
[»] scaffold0492 (2 HSPs)
scaffold0492 (143-221)||(11241-11319)
scaffold0492 (79-138)||(11222-11279)
[»] scaffold0204 (1 HSPs)
scaffold0204 (143-193)||(26933-26983)
[»] scaffold0155 (1 HSPs)
scaffold0155 (128-195)||(35651-35718)
[»] scaffold0838 (1 HSPs)
scaffold0838 (163-221)||(2253-2311)
[»] scaffold0832 (1 HSPs)
scaffold0832 (163-221)||(2284-2342)


Alignment Details
Target: chr4 (Bit Score: 138; Significance: 3e-72; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 2088598 - 2088814
Alignment:
Q  2 atcttgcaacttctttcataaaataatataaaagtgactatagtttccacaatcaatccacatttttcgatttcagcaggaatgctagcaacactctctt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | || |   |||||||||||| ||||||    
T  2088598 atcttgcaacttctttcataaaataatataaaagtgactatagtttccgcaatcaatccacatttttcgatataagaa---atgctagcaacagtctctt 2088694  T
Q  102 ttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatt 201  Q
    ||||||||||||| ||||||||||| |||| |||| || | ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||  | |    
T  2088695 ttgaacactcactcttttattagcttaaattaatgcaggatctacactttggaaatggaatccacataaagtggtgggacatacattgatttcactcaat 2088794  T
Q  202 taaagagtgagtgctagaga 221  Q
    ||||||||||||| ||||||    
T  2088795 taaagagtgagtgttagaga 2088814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 16178754 - 16178615
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgg 178  Q
    |||| ||||||||||||||||| |  ||| |||||| ||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16178754 aggagtgctagcaacactctctct--aactctcactcttttattggatgaaatcaatgtagaacctacactttggaaatggaacccacataaagtggtgg 16178657  T
Q  179 gacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||||||||||| ||   ||||||||||||||||||||    
T  16178656 gacatacattgatttca-ctcaataaagagtgagtgctagaga 16178615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 221
Target Start/End: Complemental strand, 13070087 - 13069972
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||||||||| |||||||   | |||||||||||| |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||| | | ||    
T  13070087 aacactcactcttttattgagtaaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtggaacatacattgatttcacc-aataaa 13069989  T
Q  205 agagtgagtgctagaga 221  Q
    |||||||||||||||||    
T  13069988 agagtgagtgctagaga 13069972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 37315705 - 37315594
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | ||||||||||||||||||| ||||| ||||  |||  ||||||||||||||||||||||||||||||||| |   ||||    
T  37315705 cactcactcttttattgggtgaaatcaatgtagaacctacgctttgaaaatgaaacttacataaagtggtgggacatacattgatttcaccca---aaag 37315609  T
Q  207 agtgagtgctagaga 221  Q
    |||||||| ||||||    
T  37315608 agtgagtgttagaga 37315594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 39016808 - 39016720
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||| ||| ||||||||| | |||||||||||||  ||||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  39016808 cacttactcttttattaggtaaaatcaatgtagatactacactttggaaatggaacccacgtaaaatggtgggacatacattgatttca 39016720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 42862494 - 42862570
Alignment:
Q  145 acactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||| | | ||| |||||||||||||||    
T  42862494 acactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaaaagtgagtgctagaga 42862570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 44832608 - 44832496
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||| ||||||||| | | |||||||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||| |||||||| | | |||     
T  44832608 cactcatttttttattgggtgaaatcaatgtaggacctgcactttggaaatggaatccacataaaatggtgggacatacattaatttcacccaataaaaa 44832509  T
Q  207 agtgagtgctaga 219  Q
    |||||||| ||||    
T  44832508 agtgagtgataga 44832496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 30866967 - 30867082
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||| ||||||||||| | ||| |||||| | | |||||||||| |||| |||||||||||||||||||||||||||||| |||| | | | | |||     
T  30866967 cactcatttttttattaggtgaaaacaatgtgggatctacactttgaaaatggaacccacataaagtggtgggacatacattaatttaatccaataaaaa 30867066  T
Q  207 agtgagtgctagagat 222  Q
    ||||||||||||||||    
T  30867067 agtgagtgctagagat 30867082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 84 - 221
Target Start/End: Original strand, 20225356 - 20225490
Alignment:
Q  84 tgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacat 183  Q
    |||||||||||||||||||||||||||| || ||  ||| | | |||||| ||| ||  ||||||||||||||| ||||||||| |||||||||||||||    
T  20225356 tgctagcaacactctcttttgaacactctctctt--attggtttaaatcattgt-gagtctacactttggaaatagaacccacaaaaagtggtgggacat 20225452  T
Q  184 acattgatttcacctatttaaagagtgagtgctagaga 221  Q
     ||| |||| || | | | |||||||||||||||||||    
T  20225453 gcatggattccatccaataaaagagtgagtgctagaga 20225490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 221
Target Start/End: Complemental strand, 40812198 - 40812068
Alignment:
Q  91 aacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattga 190  Q
    ||||||||||||||| || ||||||||||||| | | |||| ||||||  |||||||||||||||||  ||||||| | || ||||| || | | |||||    
T  40812198 aacactctcttttgagcattcacttttttattggataaaattaatgtatgacctacactttggaaatgaaacccacgttaaatggtgtgataaatattga 40812099  T
Q  191 tttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||| | | |||||||||||||||||||    
T  40812098 tttcacccaataaaagagtgagtgctagaga 40812068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 51206188 - 51206079
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | |||||||||||| ||||||| |||| ||||  ||| ||||||||||| |||||||||||||||||||| ||| | || |    
T  51206188 cactcactcttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaactcacataaagtgatgggacatacattgatttcatctaataaatg 51206089  T
Q  207 agtgagtgct 216  Q
    ||||||||||    
T  51206088 agtgagtgct 51206079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 2187847 - 2187938
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    |||||||| |||||||||   | ||| |||||| | |||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  2187847 aacactcatttttttattgtgtgaaaacaatgtgggacctacactttgaaaat-gaacccacataaagtggtgggacattcattgatttcacc 2187938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 8109065 - 8108987
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||  ||| ||| | ||||||||||||||||||||||| | | |||||||||||||||||||    
T  8109065 ctacactttgaaaattgaacaaacacaaattagtgggacatacattgatttcacccaataaaagagtgagtgctagaga 8108987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 43771235 - 43771165
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagt 213  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||||||||| | | | |||||||||||    
T  43771235 ctacactttgaaaattgaacccacacagagtggtgggacatacattgatttcatccaataaaagagtgagt 43771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 47237776 - 47237890
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | ||||  ||||||||||||||||||| ||||  |||  | |||||||||||||||||| |||||||||| | | | ||||    
T  47237776 cactcactcttttattggatgaaattcatgtagaacctacactttgaaaatgaaacttatataaagtggtgggacatatattgatttcatccaataaaag 47237875  T
Q  207 agtgagtgctagaga 221  Q
    ||||| |||||||||    
T  47237876 agtgaatgctagaga 47237890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 50571973 - 50571895
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||| ||||||||| || |||| ||||||||||||||| ||| | ||||||| |||||||||||    
T  50571973 ctacactttgaaaattgaagccacataaattgatggggcatacattgatttcatctaataaaagagtaagtgctagaga 50571895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 25719183 - 25719236
Alignment:
Q  142 cctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  25719183 cctacattttggaaatgaaacccacataaagtggtgggacatacattgatttca 25719236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 39471266 - 39471200
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagt 209  Q
    |||||||||| | |||||||| ||| ||||||||||||||||||||||||||| ||| | |||||||    
T  39471266 ctacactttgaagattgaaccaacacaaagtggtgggacatacattgatttcatctaataaaagagt 39471200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 24834687 - 24834638
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatt 192  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  24834687 ctacactttgaaaattgaacccacacaaaatggtgggacatacattgatt 24834638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 19447234 - 19447186
Alignment:
Q  149 tttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  19447234 tttgaaaatggaacccacataaagtggtgggacatacattggtttcacc 19447186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 195
Target Start/End: Original strand, 28304030 - 28304139
Alignment:
Q  84 tgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacat 183  Q
    ||||||||||||||||| |  ||||| ||||||||||||  || ||||||| || || |  |||||||| |||| || |||||  |||||||||||||||    
T  28304030 tgctagcaacactctctct--aacacccacttttttattgacttaaatcaaggtggatcacacactttgaaaatggaccccactaaaagtggtgggacat 28304127  T
Q  184 acattgatttca 195  Q
     |||||||||||    
T  28304128 gcattgatttca 28304139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 34129473 - 34129549
Alignment:
Q  145 acactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||| ||||||||| |||| |||||||||||| |||||||||| ||| | | |  ||||||||||||||||||    
T  34129473 acactttgaaaattgaacacacacaaagtggtgggatatacattgatctcatccaatagaagagtgagtgctagaga 34129549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 41278679 - 41278759
Alignment:
Q  133 aatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagt 213  Q
    ||||||| ||| ||| |||| |||| |||||||||||||||||| ||||||||||| |||| ||| | | |||||||||||    
T  41278679 aatgtaggaccaacattttgaaaatggaacccacataaagtggtaggacatacattaattttacccaataaaagagtgagt 41278759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 20454647 - 20454571
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||| ||| ||||||   |||||||||||||||| | ||| | |||||||||||||||||||    
T  20454647 ctacactttgaaaattgaaccaacacaaagtgt--ggacatacattgattttatctaataaaagagtgagtgctagaga 20454571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 51206057 - 51206112
Alignment:
Q  83 atgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgta 138  Q
    ||||||||||||||||||||||| ||||||||  |||||||| | |||||||||||    
T  51206057 atgctagcaacactctcttttgagcactcactcatttattagatgaaatcaatgta 51206112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 722266 - 722188
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||  |||||||||  ||| ||||||||||||||||| ||||||||| | | | ||| |||||||||||||||    
T  722266 ctacactttaaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaagtgagtgctagaga 722188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 5027408 - 5027458
Alignment:
Q  84 tgctagcaacactctcttttgaacactcacttttttattagctcaaatcaa 134  Q
    |||||||| ||||||||||| |||||||||||||||||| ||| |||||||    
T  5027408 tgctagcatcactctcttttcaacactcacttttttattggcttaaatcaa 5027458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 48339411 - 48339461
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||| ||||| |||||||||||||| |||||||||| ||||||||||||||    
T  48339411 ctacgctttgaaaattgaacccacacaaagtggtggaacatacattgattt 48339461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 49077358 - 49077284
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    |||||||||  |||||||||||||| |||||||||||||||| ||| |||| | ||| | ||||| |||||||||    
T  49077358 ctacactttaaaaattgaacccacacaaagtggtgggacatatattaattttatctaataaaagaatgagtgcta 49077284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 50164504 - 50164426
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| ||||||||||| || ||| |||||||| |||||||||||| | | | | || ||||||||||||||||    
T  50164504 ctacactttgaaaattgaacccccacaaaatggtgggagatacattgattttatccaataaatgagtgagtgctagaga 50164426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 5545718 - 5545642
Alignment:
Q  112 acttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacatt 188  Q
    ||||||| ||| ||| |||||||||| |  | |||| |||| |||| || |||||||||||||||||||||||||||    
T  5545718 actttttaatttgcttaaatcaatgtgggtcttacattttgaaaatggagcccacataaagtggtgggacatacatt 5545642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 33996012 - 33996056
Alignment:
Q  149 tttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||    
T  33996012 tttgaaaattgaacccacaaaaagtggtgagacatacattgattt 33996056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 49242279 - 49242227
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||| ||| |||||||||||||| |||||| ||||||||| ||||||||||    
T  49242279 ctacacattgaaaattgaacccacacaaagtgatgggacatatattgatttca 49242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 22542485 - 22542438
Alignment:
Q  148 ctttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||| |||||||||||||| |||||||||| |||||| |||||||||    
T  22542485 ctttgaaaattgaacccacacaaagtggtggaacatactttgatttca 22542438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 22592406 - 22592335
Alignment:
Q  150 ttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||| ||||| ||| |||||||||||||| ||||| |||||| | | | ||||||||||||| |||||    
T  22592406 ttggaaatagaacctacacaaagtggtgggacaaacatttatttcatccaataaaagagtgagtgccagaga 22592335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 29699588 - 29699522
Alignment:
Q  153 gaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctaga 219  Q
    ||||| ||||| ||| |||||||||||||||  |||||||||| | | | |||||||||||||||||    
T  29699588 gaaatagaaccaacacaaagtggtgggacatgtattgatttcatccaataaaagagtgagtgctaga 29699522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 52671988 - 52671862
Alignment:
Q  91 aacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattga 190  Q
    ||||||||||||  || ||||||| | ||||||| | |||||| || ||||  ||||||||  |||||||||  ||||||| |||||||||||||||| |    
T  52671988 aacactctcttt--aatactcactatcttattagtttaaatcattg-agaatttacactttaaaaattgaacttacataaaatggtgggacatacattta 52671892  T
Q  191 tttcacctatttaaagagtgagtgctagag 220  Q
    ||||| | | | ||| ||||||| ||||||    
T  52671891 tttcatccaataaaaaagtgagtactagag 52671862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 8109137 - 8109108
Alignment:
Q  82 aatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||||||    
T  8109137 aatgctagcaacactctcttttgaacactc 8109108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 21776917 - 21776966
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||| |||||||||  || |||||||||||||| ||||||||||||||||    
T  21776917 tacattttggaaataaaatccacataaagtggtaggacatacattgattt 21776966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 45311022 - 45311071
Alignment:
Q  146 cactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||||| |||||||| || || |||||||||||||||| ||||||||||    
T  45311022 cactttgaaaattgaatccccacaaagtggtgggacatatattgatttca 45311071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 4138974 - 4138922
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||||||||||||| ||| ||| | ||  |||||||||||||||||||||||    
T  4138974 ctacactttggaaatagaatccataaaatatggtgggacatacattgatttca 4138922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 11895219 - 11895191
Alignment:
Q  82 aatgctagcaacactctcttttgaacact 110  Q
    |||||||||||||||||||||||||||||    
T  11895219 aatgctagcaacactctcttttgaacact 11895191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 19447311 - 19447279
Alignment:
Q  84 tgctagcaacactctcttttgaacactcacttt 116  Q
    |||||||||||||||||||||||||||| ||||    
T  19447311 tgctagcaacactctcttttgaacactctcttt 19447279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 20225521 - 20225489
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||| |||||||||||||    
T  20225521 aggaatgctagcaacactcacttttgaacactc 20225489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 26361379 - 26361431
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| | |||||||||||| ||| ||||||| |||||||||| ||||    
T  26361379 ctacactttgaatattgaacccacacaaaatggtgggtcatacattgacttca 26361431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 31250954 - 31251006
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||| |||| |||||||||   |||||| |||||||||||||||||||||||    
T  31250954 ctacattttgaaaattgaacgtccataaaatggtgggacatacattgatttca 31251006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 35179717 - 35179666
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| ||||||||||||| |||||| |||  ||||||||||||||||    
T  35179717 ctacactttg-aaattgaacccacgtaaagtagtgaaacatacattgatttca 35179666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 47009298 - 47009222
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctaga 219  Q
    |||||||||| ||||||||| |||| |||| |||| |||| ||||| |||| | | | | |||||||||||||||||    
T  47009298 ctacactttgaaaattgaactcacacaaagcggtgagacaaacattaattttatccaataaaagagtgagtgctaga 47009222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 47237923 - 47237891
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    |||||||||| ||||||||||||||||||||||    
T  47237923 aggaatgctatcaacactctcttttgaacactc 47237891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 49682862 - 49682914
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| ||||||||  || ||||||||||| || ||||||||||||||    
T  49682862 ctacactttgaaaattgaattcaaataaagtggtgagatatacattgatttca 49682914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 49738957 - 49739033
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggac 181  Q
    |||||||||| ||||||| | | ||||| |||| |  | ||||||||||||||||  ||||||||| ||||||||||    
T  49738957 aacactcactcttttatttggtgaaatccatgtgggtcatacactttggaaattggtcccacataatgtggtgggac 49739033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 41918165 - 41918026
Alignment:
Q  82 aatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggac 181  Q
    ||||| |||||||||||||||||| |||||||| ||||||| | | |||||||||||| |||||||||||| |||| ||| |||||||||||||||||||    
T  41918165 aatgccagcaacactctcttttgagcactcactcttttattgggtaaaatcaatgtaggacctacactttgaaaatggaatccacataaagtggtgggac 41918066  T
Q  182 atacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||||||||| | | |||||||||||||||||||    
T  41918065 atacattgatttcacccaataaaagagtgagtgctagaga 41918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 11135884 - 11135770
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | |||     
T  11135884 cactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaat 11135785  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  11135784 agtgagtgctagaga 11135770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 11430562 - 11430474
Alignment:
Q  131 tcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctaga 219  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||    
T  11430562 tcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgagtgctaga 11430474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 105 - 221
Target Start/End: Original strand, 14094034 - 14094150
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||||||||||||| |||   | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||    
T  14094034 aacactcactttttgattgagtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaa 14094133  T
Q  205 agagtgagtgctagaga 221  Q
    | |||||||||| ||||    
T  14094134 aaagtgagtgctggaga 14094150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 13388370 - 13388483
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccac--ataaagtggtgggacatacattgatttcacctattt 202  Q
    |||||||||||||||||| | | |||||||||||| |||||||||||| ||||  |||||||  ||||||||||| ||||||||||||||||||| | |     
T  13388370 aacactcacttttttattggatgaaatcaatgtagtacctacactttgaaaatgaaacccacatataaagtggtgagacatacattgatttcacccaata 13388469  T
Q  203 aaagagtgagtgct 216  Q
    ||||||||||||||    
T  13388470 aaagagtgagtgct 13388483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 32848642 - 32848732
Alignment:
Q  131 tcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||| |||||||||||| |||| ||| |||||||||||||||||||||||| |||||||||| | | |||||||||||||||||||    
T  32848642 tcaatgtaggacctacactttgaaaatggaatccacataaagtggtgggacatacaatgatttcacccaataaaagagtgagtgctagaga 32848732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 41095644 - 41095758
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    ||||||||| |||||| | | |||||||||||| |||||||||||| |||| ||||||||| | |||| |||||||||||||||||||||| | | || |    
T  41095644 cactcacttatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacacagagtgatgggacatacattgatttcacccaataaatg 41095743  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  41095744 agtgagtgctagaga 41095758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 24436500 - 24436590
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||||| || ||||||| | | |||||||||||| ||| |||||||| |||| |||||||||||||||||||||| ||||||||||||||    
T  24436500 aacactccctcttttattgggtgaaatcaatgtaggacccacactttgaaaatagaacccacataaagtggtgggatatacattgatttca 24436590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 44739242 - 44739149
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||| ||||||| |||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||  |   |||||||||||||||||||    
T  44739242 aaattaatgtaggacctacactttggaaatacaactcacataaagtggtgggacatacattaatttcactcaagaaaagagtgagtgctagaga 44739149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 30678945 - 30679051
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||||||||| | ||||| ||| |||||| ||| ||  |||||||||| |||||||||||||| ||||||||||||||||||||||||| | | ||| ||    
T  30678945 aacactcactctcttattggcttaaatcattgt-gagtctacactttgaaaattgaacccacacaaagtggtgggacatacattgattttatccattgaa 30679043  T
Q  205 agagtgag 212  Q
    ||||||||    
T  30679044 agagtgag 30679051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 221
Target Start/End: Complemental strand, 28110011 - 28109899
Alignment:
Q  108 actcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaaga 207  Q
    ||||||||||||||| | | |||||| | ||| | |||||||||| |||| ||||||||||||| |||||| |||| ||||||||||||| | | ||| |    
T  28110011 actcacttttttattggatgaaatcattctaggatctacactttg-aaatggaacccacataaaatggtggaacatgcattgatttcacccaataaaaaa 28109913  T
Q  208 gtgagtgctagaga 221  Q
    ||||||||||||||    
T  28109912 gtgagtgctagaga 28109899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 2225333 - 2225255
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||  ||||||||| ||||||||||||||||||||||||||| | | | |||||||| ||||||||||    
T  2225333 ctacactttgtaaaccgaacccacacaaagtggtgggacatacattgatttcatccaataaaagagtgggtgctagaga 2225255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 4578632 - 4578726
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaaccca-cataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |  |||||||||||||||| | ||||  |||||||||||||||| ||||||||||||||| | | |||||||||||| ||||||    
T  4578632 aaatcaatgtgggtcctacactttggaaatgggaccccgcataaagtggtgggacctacattgatttcacccaataaaagagtgagtgttagaga 4578726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 22540477 - 22540403
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||||||||| |||| | |||||||||||||||||||||||||||||| | | | ||| |||||||||||    
T  22540477 ctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcta 22540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 50773146 - 50773260
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||| | ||||||| | | |||| ||||||| ||||| | ||||||||| |||||||||||||||||||| ||||| |||||||| | | | | ||||    
T  50773146 cactcattcttttattgggtaaaattaatgtaggacctatattttggaaatggaacccacataaagtggtggaacatatattgattttatccaataaaag 50773245  T
Q  207 agtgagtgctagaga 221  Q
    |||||||| ||||||    
T  50773246 agtgagtgttagaga 50773260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 45426774 - 45426878
Alignment:
Q  91 aacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattga 190  Q
    |||| ||||||||||||||||  ||||| ||| ||| |||| |||||||  ||||||||||  |||| |||| |||||||| |||||| ||||||||| |    
T  45426774 aacattctcttttgaacactctttttttaattggcttaaattaatgtaggtcctacactttaaaaatagaacacacataaaatggtggaacatacattaa 45426873  T
Q  191 tttca 195  Q
    |||||    
T  45426874 tttca 45426878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 193
Target Start/End: Complemental strand, 29418619 - 29418540
Alignment:
Q  114 ttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    ||||||||| | | |||||||||||| | ||||||||||||||| |||| |||||||||||||| || ||||||| ||||    
T  29418619 ttttttattgggtgaaatcaatgtaggatctacactttggaaatagaactcacataaagtggtgagatatacattaattt 29418540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 43851117 - 43851184
Alignment:
Q  154 aaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| | | || |||||||| |||||||    
T  43851117 aaatggaacccatataaagtggtgggacatacattgatttcacccaataaatgagtgagtactagaga 43851184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 15523319 - 15523245
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||| ||||| |||| | |||||||||||||||||||||||||||||| | | | ||| |||||||||||    
T  15523319 ctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcta 15523245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 15531313 - 15531239
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||| ||||| |||| | |||||||||||||||||||||||||||||| | | | ||| |||||||||||    
T  15531313 ctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcta 15531239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 19101672 - 19101746
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    |||||||||| |||| |||| | |||||||||||||||||||||||||||||| | | | ||| |||||||||||    
T  19101672 ctacactttgaaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcta 19101746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 24911568 - 24911494
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||||  |||||||| ||||||||||||||||||| ||||||| | | | ||||| |||||||||||||    
T  24911568 actttggaaataaaacccacaaaaagtggtgggacatacatggatttcatcgaataaaagaatgagtgctagaga 24911494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 28218119 - 28218193
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    |||||||||| |||||||| ||||| ||||||||| ||||||||||||||||| | | | ||||||||| |||||    
T  28218119 ctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaataaaagagtgaatgcta 28218193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 41958192 - 41958114
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| ||||||||||| || ||| ||||||||||||||||||||||| | | | || ||||||||||| ||||    
T  41958192 ctacactttgaaaattgaacccccacaaaatggtgggacatacattgatttcatccaataaatgagtgagtgcttgaga 41958114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 13114742 - 13114819
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||| ||||||||| ||| ||| |||||||||||||||||| |||||||| | ||| | |||||||||||| ||||||    
T  13114742 tacattttggaaatggaatccatataaagtggtgggacatatattgattttatctaataaaagagtgagtgttagaga 13114819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 13388507 - 13388450
Alignment:
Q  81 gaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgta 138  Q
    ||||||||||||||||||||||||| |||||||| ||||||| | | |||||||||||    
T  13388507 gaatgctagcaacactctcttttgagcactcactcttttattgggtgaaatcaatgta 13388450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 5848164 - 5848100
Alignment:
Q  133 aatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    |||||||||||||||||||  |||| ||||||||||||| | ||| |||||||||| ||||||||    
T  5848164 aatgtagaacctacactttaaaaatggaacccacataaaatagtgagacatacattaatttcacc 5848100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 8899125 - 8899061
Alignment:
Q  141 acctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaa 205  Q
    |||||||||||| |||||||||||||| |||| |||||||||||| || |||||| ||| |||||    
T  8899125 acctacactttgaaaattgaacccacacaaaggggtgggacatacctttatttcatctaattaaa 8899061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 50539222 - 50539162
Alignment:
Q  154 aaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtg 214  Q
    ||||||||||||||||||||||||| |||||| ||||||||| | | | ||||||||||||    
T  50539222 aaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtgagtg 50539162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 9165390 - 9165339
Alignment:
Q  164 cacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgc 215  Q
    ||||||||||||| |||||||||||||||||||| | | |||||||||||||    
T  9165390 cacataaagtggtaggacatacattgatttcacccaataaaagagtgagtgc 9165339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 32211866 - 32211933
Alignment:
Q  154 aaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||| |||| ||||| || |||||||||||||||||| ||| | |||||||||||||| ||||    
T  32211866 aaattgaactcacacaaagtagttggacatacattgatttcatctaataaaagagtgagtgctggaga 32211933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 3872705 - 3872755
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| ||||||||    
T  3872705 ctacactttggaaattgaacctacacaaagtggtgtgacatatattgattt 3872755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 6133699 - 6133773
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||| |||||||||||||| ||  |||||||||||| |||||||||| | | | |||| ||||||||||||||    
T  6133699 actttgaaaattgaacccacacaatatggtgggacatatattgatttcatccaataaaagggtgagtgctagaga 6133773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 33114080 - 33114030
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||| |||||||||| ||||||| |||||||||||||| ||||||    
T  33114080 ctacactttgaaaattgaacctacataaaatggtgggacatacaatgattt 33114030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 10659839 - 10659891
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||||||||| ||| |||||||| |||||| |||||||||||    
T  10659839 ctacactttgaaaattgaacctacacaaagtggtcggacatccattgatttca 10659891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 13889328 - 13889296
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    |||||||||||||||||||||||||||||||||    
T  13889328 aggaatgctagcaacactctcttttgaacactc 13889296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 29673642 - 29673534
Alignment:
Q  82 aatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggac 181  Q
    ||||||||||||||||||| |  || ||||||||||||||| | | |||| | |||||   |||||||||| |||||||| | ||| ||| |||||||||    
T  29673642 aatgctagcaacactctctct--aatactcacttttttattggtttaaataattgtag-ttctacactttgaaaattgaaactacacaaaatggtgggac 29673546  T
Q  182 atacattgattt 193  Q
    ||| ||||||||    
T  29673545 atatattgattt 29673534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 33193159 - 33193107
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| ||||||||||| || ||| |||||| ||||||||||||||||    
T  33193159 ctacactttgaaaattgaaccctcacaaaatggtggcacatacattgatttca 33193107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 36567005 - 36566953
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||| ||||||| |||||||| || |||||||||||||||||    
T  36567005 ctacactttgaaaatagaacccaaataaagtgatgagacatacattgatttca 36566953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 44272027 - 44271975
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||||||||| ||| ||| |||||| ||||||||||||||||    
T  44272027 ctacactttgaaaattgaacctacaaaaaatggtggaacatacattgatttca 44271975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 221
Target Start/End: Original strand, 50424899 - 50425015
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||| ||||||||||||| | | |||||||||| |  | |||||||||||||| ||||  |||||||||||||||  ||  |||||||| | | | | ||    
T  50424899 aacattcacttttttattgggttaaatcaatgtgggtcatacactttggaaatggaacttacataaagtggtggggtatggattgattttatccaataaa 50424998  T
Q  205 agagtgagtgctagaga 221  Q
    |||||||||| ||||||    
T  50424999 agagtgagtgttagaga 50425015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 1093120 - 1093218
Alignment:
Q  118 ttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||| | |||||| ||| |||| ||||||||||||||  ||| || | |||||||||| |||||||||||||||| ||| | || ||||| ||||||    
T  1093120 ttattagtttaaatcattgtggaac-tacactttggaaatataactcatacaaagtggtggaacatacattgatttcatctaataaacgagtgcgtgcta 1093218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 15661001 - 15660931
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtg 214  Q
    |||| |||||||||  ||||| |||||||||||||||||| ||||||||| | | | | ||||||||||||    
T  15661001 tacattttggaaataaaacccgcataaagtggtgggacatgcattgattttatccaataaaagagtgagtg 15660931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 26980339 - 26980385
Alignment:
Q  149 tttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||| ||||||||| |||| ||| |||||||||||||||||||||||    
T  26980339 tttgaaaattgaactcacacaaaatggtgggacatacattgatttca 26980385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 28218045 - 28218074
Alignment:
Q  82 aatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||||||    
T  28218045 aatgctagcaacactctcttttgaacactc 28218074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 37525662 - 37525594
Alignment:
Q  118 ttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacat 187  Q
    ||||||| | |||||| |||||| | || |||||| |||||||||||||||||| |||||| ||||||||    
T  37525662 ttattagtttaaatcattgtagatc-tagactttgaaaattgaacccacataaaatggtggaacatacat 37525594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 43832393 - 43832348
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagt 173  Q
    |||||||||||| | |||||||||||||||  ||||||||||||||    
T  43832393 aaatcaatgtaggatctacactttggaaatgaaacccacataaagt 43832348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 45179318 - 45179367
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    ||||||||| ||||||||||| || |||||| ||| ||||||||||||||    
T  45179318 tacactttgaaaattgaaccctcacaaagtgatggaacatacattgattt 45179367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 50308914 - 50308861
Alignment:
Q  82 aatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaat 135  Q
    ||||||||||||| ||||||||||  ||||||||||||||| | | ||||||||    
T  50308914 aatgctagcaacattctcttttgagtactcacttttttattgggtgaaatcaat 50308861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 8741298 - 8741346
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||| |||||||||||||| ||| | ||| |||||||||||||||||    
T  8741298 actttgaaaattgaacccacacaaattagtgagacatacattgatttca 8741346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 11135737 - 11135769
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  11135737 aggaatgctagcaacactctcttttgagcactc 11135769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 11987735 - 11987683
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| ||||||||||| ||  ||||||||| ||||||||| ||||||    
T  11987735 ctacactttgaaaattgaacccgcactaagtggtggaacatacattaatttca 11987683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 32848765 - 32848733
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    |||||||||| ||||||||||||||||||||||    
T  32848765 aggaatgctaacaacactctcttttgaacactc 32848733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 39019573 - 39019605
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||| |||||||    
T  39019573 aggaatgctagcaacactctcttttcaacactc 39019605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 44739116 - 44739148
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||| |||||||||||||||||||||||||    
T  44739116 aggaatgttagcaacactctcttttgaacactc 44739148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 5e-40; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 17354538 - 17354676
Alignment:
Q  82 aatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggac 181  Q
    |||||||||||||||||||||||  |||||||||||||||| | | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  17354538 aatgctagcaacactctcttttgg-cactcacttttttattgggtaaaatcaatgtaggacctacactttggaaatagaacccacataaagtggtgggac 17354636  T
Q  182 atacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||||||| | | | ||||| |||||| ||||||    
T  17354637 atacattgatttcatccaataaaagaatgagtgttagaga 17354676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 221
Target Start/End: Complemental strand, 22786293 - 22786182
Alignment:
Q  110 tcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagt 209  Q
    ||||| |||||| || | ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | ||| |||    
T  22786293 tcactcttttatcaggtgaaatcaatgtataacctacactttggaaatggaacccacataaagtggtgagacatacattgatttcacctaataaaaaagt 22786194  T
Q  210 gagtgctagaga 221  Q
    ||||||||||||    
T  22786193 gagtgctagaga 22786182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 105 - 221
Target Start/End: Original strand, 19494372 - 19494488
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    ||||||||| |||||||| | | |||||||||||| | |||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | | ||    
T  19494372 aacactcacatttttattgggtgaaatcaatgtaggatctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaa 19494471  T
Q  205 agagtgagtgctagaga 221  Q
    ||||||||| |||||||    
T  19494472 agagtgagtactagaga 19494488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 26703475 - 26703589
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | |||| ||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| | | ||||    
T  26703475 cactcactcttttattgggtgaaataaatgtaggacctacactttagaaatggaacccacataaagtggtgagacatacattgatttcacccaataaaag 26703574  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  26703575 agtgagtgctagaga 26703589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 45909603 - 45909511
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    |||||||||| ||||||| | | |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45909603 aacactcactcttttattgggtaaaatcaatgtaggacctacaatttggaaatggaacccacataaagtggtgggacatacattgatttcacc 45909511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 13919925 - 13919811
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    ||||||||  |||||| | | |||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| | | || |    
T  13919925 cactcactcatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacatacattgatttcacccaataaatg 13919826  T
Q  207 agtgagtgctagaga 221  Q
    || ||||||||||||    
T  13919825 agcgagtgctagaga 13919811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 25428514 - 25428620
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | |||||||||||| | |||||||||||||||  |||||||||||||||||||||||||||||||||||||  | | ||||    
T  25428514 cactcactcttttattggataaaatcaatgtaggatctacactttggaaatgtaacccacataaagtggtgggacatacattgatttcacacaataaaag 25428613  T
Q  207 agtgagt 213  Q
    |||||||    
T  25428614 agtgagt 25428620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 107 - 217
Target Start/End: Original strand, 19840920 - 19841030
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | |||||||| ||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| | | | ||||    
T  19840920 cactcactcttttattgggtgaaatcaatataggacctacactttggaaatggaacccacataaagtggtaagacatacattgatttcaaccaataaaag 19841019  T
Q  207 agtgagtgcta 217  Q
    ||||| |||||    
T  19841020 agtgaatgcta 19841030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 14759784 - 14759677
Alignment:
Q  111 cacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtg 210  Q
    |||| ||||||| | | |||| ||||||| ||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||  | | ||||||||    
T  14759784 cactcttttattggatgaaattaatgtaggacctacactttggaaatagaacctacctaaagtggtgggacataaattgatttcactcaataaaagagtg 14759685  T
Q  211 agtgctag 218  Q
    ||||||||    
T  14759684 agtgctag 14759677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 26459164 - 26459068
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtg 177  Q
    |||||||||||||||||||||| | ||||  ||||||||||||||| | ||| |||||| | ||||||||||| ||||| |||||||||||||||||||    
T  26459164 aggaatgctagcaacactctctctagaac--tcacttttttattaggtaaaaacaatgtgggacctacactttagaaatggaacccacataaagtggtg 26459068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 22190048 - 22189970
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||||||| ||||||||||| ||||||||||||||| | | | |||||||||||||||||||    
T  22190048 ctacactttgaaaattgaacccacacaaagtggtgggccatacattgatttcatccaataaaagagtgagtgctagaga 22189970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 33008213 - 33008134
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagagat 222  Q
    |||||| |||||||| ||||||||| |||||||||||||||||| |||||||| | | | ||||||||||||||||||||    
T  33008213 ctacacattggaaatagaacccacacaaagtggtgggacatacaatgatttcatccaataaaagagtgagtgctagagat 33008134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 7775107 - 7775035
Alignment:
Q  145 acactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    |||||||| ||||||||| |||| ||||||||||||||||||||||||||| | | | |||||||||||||||    
T  7775107 acactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgcta 7775035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 188
Target Start/End: Original strand, 31959835 - 31959933
Alignment:
Q  90 caacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagt-ggtgggacatacatt 188  Q
    |||||||||||||||| ||||| ||||||  | || | |||| ||||||| ||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  31959835 caacactctcttttgagcactcgctttttattgag-tgaaattaatgtaggacccacactttggaaatagaacccacataaagtgggtgggacatacatt 31959933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 31502479 - 31502613
Alignment:
Q  82 aatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggac 181  Q
    |||||||||||||||||||||| ||||||| |||    ||| | | |||||| ||| ||  |||||||||| ||||||||| |||| ||| |||||||||    
T  31502479 aatgctagcaacactctcttttaaacactctctt----attggtttaaatcattgt-gagtctacactttgaaaattgaacgcacacaaaatggtgggac 31502573  T
Q  182 atacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||| ||||||||| | | | |||||||||||| ||||||    
T  31502574 ataccttgatttcatccaataaaagagtgagtgttagaga 31502613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 11824179 - 11824102
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||| |||||||| | ||| ||| ||||||||||||||||||||||| | | | |||||||||||||||||||    
T  11824179 tacactttgaaaattgaagctacacaaaatggtgggacatacattgatttcatccaataaaagagtgagtgctagaga 11824102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 26190050 - 26189962
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||| ||||||| | | ||||||| |||| |||||||||||| ||||  ||||||||| | |||||||||||| |||||||||    
T  26190050 aacactcactcttttattgggtaaaatcaacgtaggacctacactttgaaaatgaaacccacatgaggtggtgggacatgcattgattt 26189962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 27888391 - 27888341
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  27888391 ctacactttaaaaattgaacccacacaaagtggtgggacatacattgattt 27888341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 32205219 - 32205115
Alignment:
Q  108 actcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaaga 207  Q
    ||||||| | ||||||| | |||||| |||||| |||| |||||  |||||||||||||| ||| |||| |||||||||||||||||| | | | |||||    
T  32205219 actcactctcttattagtttaaatcattgtaga-cctatactttaaaaattgaacccacacaaaatggtaggacatacattgatttcatccaataaaaga 32205121  T
Q  208 gtgagt 213  Q
    ||||||    
T  32205120 gtgagt 32205115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 46068048 - 46067995
Alignment:
Q  142 cctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||| || |||||| |||||||||||||||||||| ||||||||||||||||    
T  46068048 cctacaattcggaaatggaacccacataaagtggtggaacatacattgatttca 46067995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 11692287 - 11692236
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||||||| |||||||||| ||| |||||||| ||||||||||||||||||    
T  11692287 tacactttgaaaattgaacctacacaaagtggtaggacatacattgatttca 11692236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 10619437 - 10619517
Alignment:
Q  116 ttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    ||||||||| | ||||||||||  ||| |||||||||  ||| |||||||||||||||| ||||| ||| ||||||||||||    
T  10619437 ttttattaggtgaaatcaatgtt-aacttacactttgtcaatggaacccacataaagtgatgggatatatattgatttcacc 10619517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 24539195 - 24539272
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||| ||||||||| ||| ||| |||||||||||||||||| |||||||| | | | | |||||||||||| ||||||    
T  24539195 tacattttggaaatggaatccatataaagtggtgggacatatattgattttatccaataaaagagtgagtgttagaga 24539272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 8073370 - 8073434
Alignment:
Q  154 aaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctag 218  Q
    |||||||||  ||| ||||||||||||||||||||||||||| |   | ||||||||||||||||    
T  8073370 aaattgaacttacacaaagtggtgggacatacattgatttcatccgataaaagagtgagtgctag 8073434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 12271094 - 12271043
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||| ||||| ||| |||||||||||||||||||||||||||    
T  12271094 ctacactttgaaaatagaacc-acacaaagtggtgggacatacattgatttca 12271043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 25686906 - 25686958
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||||||||||| | ||||||||  |||||||||||||||||    
T  25686906 ctacactttgaaaattgaacccataaaaagtggtatgacatacattgatttca 25686958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 14795239 - 14795188
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||||||  |||||||||| ||| ||| |||||||||||||||||||||||    
T  14795239 tacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttca 14795188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 15242231 - 15242180
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||||||  |||||||||| ||| ||| |||||||||||||||||||||||    
T  15242231 tacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttca 15242180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 19841055 - 19840996
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgta 138  Q
    ||||||||||||||||||||||||| | || ||||| ||||||| | | |||||||||||    
T  19841055 aggaatgctagcaacactctctttttagcattcactcttttattggttgaaatcaatgta 19840996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 21963186 - 21963237
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtggg 179  Q
    |||||||||||| | ||||||||||||||| |||| |||||||| |||||||    
T  21963186 aaatcaatgtaggatctacactttggaaatggaactcacataaaatggtggg 21963237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 17813850 - 17813923
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||| ||||| |||| |||| ||||||||||| ||||||||||||||   || | |||||||||||||||||||    
T  17813850 actttagaaatagaactcacacaaagtggtggg-catacattgatttcttttaataaaagagtgagtgctagaga 17813923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 44511007 - 44511085
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||| ||| ||||||||| || | |||||| || ||||||||||||||||| | | | ||| |||||||||||||||    
T  44511007 ctacacattgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtgagtgctagaga 44511085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 46517400 - 46517322
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| ||||||||||| || | | |||||||| |||||||||||| | | | | || ||||||||||||||||    
T  46517400 ctacactttgaaaattgaacccccacagaatggtgggatatacattgattttatccaataaatgagtgagtgctagaga 46517322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 12263507 - 12263556
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatt 192  Q
    |||||||||| ||||||| || ||| |||||| |||||||||||||||||    
T  12263507 ctacactttgaaaattgatcctacacaaagtgatgggacatacattgatt 12263556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 17749802 - 17749725
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||| |||||||||  || ||| |||||||||||||||||| |||||||| | | | | |||||||||||| ||||||    
T  17749802 tacattttggaaatgaaatccatataaagtggtgggacatatattgattttatccaataaaagagtgagtgttagaga 17749725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 27949454 - 27949425
Alignment:
Q  82 aatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||||||    
T  27949454 aatgctagcaacactctcttttgaacactc 27949425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 34281058 - 34280977
Alignment:
Q  116 ttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    ||||||||| | ||| |||||||| ||  |||||||| ||||  ||| ||||||||||||||  ||||||||| ||||||||    
T  34281058 ttttattaggtaaaaccaatgtaggactcacactttgaaaataaaactcacataaagtggtgaaacatacattaatttcacc 34280977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 2520772 - 2520740
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||| |||||||    
T  2520772 aggaatgctagcaacactctcttttcaacactc 2520740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 6442274 - 6442222
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||||||| || || ||| |||||| ||||||||||||||||    
T  6442274 ctacactttgaaaattgaatccccacaaaatggtggaacatacattgatttca 6442222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 10619573 - 10619541
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  10619573 aggaatgctagcaacactctcttttgatcactc 10619541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 14759828 - 14759796
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  14759828 aggaatgctagcaacactctcttttgagcactc 14759796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 22786149 - 22786181
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  22786149 aggaatgctagcaacactctcttttgagcactc 22786181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 32205077 - 32205109
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||| |||||||||||||    
T  32205077 aggaatgctagcaacactcacttttgaacactc 32205109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 42224626 - 42224740
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||    
T  42224626 cactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacctaataaaag 42224725  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  42224726 agtgagtgctagaga 42224740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 24915200 - 24915091
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | |||||||||||| || ||||||||| |||| |||||||||||||||||||||||||| |||||||||||||| | ||||    
T  24915200 cactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacccacataaagtggtgggacatatattgatttcacctaataaaag 24915101  T
Q  207 agtgagtgct 216  Q
    || |||||||    
T  24915100 agcgagtgct 24915091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 221
Target Start/End: Original strand, 40971486 - 40971602
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||||||||| ||||||| | | |||||||||||  |||||||||||||||||  |||  ||||||||||||||||||||||||||||||||  | | ||    
T  40971486 aacactcactattttattgggtaaaatcaatgtaagacctacactttggaaatgaaacttacataaagtggtgggacatacattgatttcactcaataaa 40971585  T
Q  205 agagtgagtgctagaga 221  Q
    |||||||||||||||||    
T  40971586 agagtgagtgctagaga 40971602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 217
Target Start/End: Complemental strand, 34818333 - 34818221
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||||||||||||||||| | | |||||||||||| ||||| ||||| ||||| |||||||||||||| ||||  |||||||||||||| || || | ||    
T  34818333 aacactcacttttttatttggtaaaatcaatgtaggacctatactttagaaatggaacccacataaagcggtgacacatacattgattttacttaataaa 34818234  T
Q  205 agagtgagtgcta 217  Q
    |||||||||||||    
T  34818233 agagtgagtgcta 34818221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 13456200 - 13456288
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||| ||||||||| | ||||||||||||  ||||||||||| |||| ||||||||||||| |||||||| ||||||||||||||    
T  13456200 cactcactcttttattaggtgaaatcaatgtaggtcctacactttgaaaatggaacccacataaaatggtgggaaatacattgatttca 13456288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 17568741 - 17568848
Alignment:
Q  111 cacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtg 210  Q
    |||| ||||||| | | |||| ||||||| ||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||  | | ||||||||    
T  17568741 cactcttttattggatgaaattaatgtaggacctacactttggaaatagaacctacctaaagtggtgggacataaattgatttcactcaataaaagagtg 17568840  T
Q  211 agtgctag 218  Q
    ||||||||    
T  17568841 agtgctag 17568848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 24991031 - 24990924
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | |||||||||||| || ||||||||| |||| ||||| |||||||||||||||||||| |||||||||||| | | ||||    
T  24991031 cactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacctacataaagtggtgggacatatattgatttcacccaataaaag 24990932  T
Q  207 agtgagtg 214  Q
    || |||||    
T  24990931 agcgagtg 24990924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 5413808 - 5413878
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagt 213  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| | | | |||||||||||    
T  5413808 ctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaaagagtgagt 5413878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 219
Target Start/End: Complemental strand, 8912655 - 8912543
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||||| | |||||||| ||  || ||||||||||||||  |||||||| ||||||| |||||||| ||| |||| ||| | | ||||    
T  8912655 cactcactcttttattaggtgaaatcaatatatgacatacactttggaaatgaaacccacagaaagtggagggacatatattaattttaccaaataaaag 8912556  T
Q  207 agtgagtgctaga 219  Q
    |||||||||||||    
T  8912555 agtgagtgctaga 8912543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 197
Target Start/End: Complemental strand, 26072248 - 26072158
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    |||||||| ||||||| | | ||| |||||| | |||||||||||||||||  |  ||||||||||||||| |||||||||||||||||||    
T  26072248 cactcactcttttattgggtgaaaacaatgtgggacctacactttggaaatgaattccacataaagtggtgagacatacattgatttcacc 26072158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 107 - 210
Target Start/End: Complemental strand, 4959423 - 4959320
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| |   |||||||||||  |||||||||||| ||||  |||||||||||| || || ||||||||||||||||||| | | ||||    
T  4959423 cactcactcttttattgggggaaatcaatgtatcacctacactttgaaaatgtaacccacataaaatgatgagacatacattgatttcacccaataaaag 4959324  T
Q  207 agtg 210  Q
    ||||    
T  4959323 agtg 4959320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 10142047 - 10142121
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    |||||||||| |||| ||||| ||| ||||||||||||||||||||||||| | | | | |||||||||||||||    
T  10142047 ctacactttgaaaatggaaccaacacaaagtggtgggacatacattgattttatccaataaaagagtgagtgcta 10142121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 27592523 - 27592597
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||||||||| |||| | |||||||||||| ||||||||||||||||| | | | ||| |||||||||||    
T  27592523 ctacactttggaaatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtgagtgcta 27592597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 32050452 - 32050338
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||||||||||| | | |||||||||||    | |||||||| |||| |||||||||||||||| || |||||| ||| |||||||| | | ||||    
T  32050452 cactcacttttttattgggtgaaatcaatgtatgttccacactttgaaaatggaacccacataaagtgatgagacatatattaatttcacccaataaaag 32050353  T
Q  207 agtgagtgctagaga 221  Q
    | ||| |||||||||    
T  32050352 aatgaatgctagaga 32050338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 210
Target Start/End: Original strand, 41330464 - 41330531
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtg 210  Q
    |||||||||| |||||||||| ||| |||||| ||||||||||||| |||||| ||| | ||||||||    
T  41330464 ctacactttgaaaattgaacctacacaaagtgatgggacatacattaatttcatctaataaaagagtg 41330531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 10253161 - 10253231
Alignment:
Q  151 tggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||| | | |  ||||||||||| ||||||    
T  10253161 tggaaatagaactcacataaagtggtgggacatacattaatttcatccaatagaagagtgagtgttagaga 10253231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 17537173 - 17537251
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| ||||| |||| ||| ||| ||||||||||||||||||||| | | | | |||||||||||| ||||||    
T  17537173 ctacactttgaaaattaaaccaacaaaaattggtgggacatacattgatttgatcaaataaaagagtgagtgatagaga 17537251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 30325945 - 30326019
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    |||||||||||| || |||| | |||||||||||| ||||||||||||||||| | | | ||| |||||||||||    
T  30325945 ctacactttggagatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtgagtgcta 30326019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 34368469 - 34368391
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| ||| |||||||||| |||||||||| |||||||||| ||| | | | | |||||||||||| ||||||    
T  34368469 ctacactttgaaaaatgaacccacacaaagtggtggaacatacattggttttatccaatgaaagagtgagtgttagaga 34368391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 39246717 - 39246667
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||| ||| ||||| |||| |||||||||||||||||||||||||    
T  39246717 ctacactttgaaaactgaactcacacaaagtggtgggacatacattgattt 39246667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 6264026 - 6263914
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||| | | | |||||||||||  | | ||||||||||| | |||||||  ||||||||||||||||| |||||||| ||| | | || |    
T  6264026 cactcactcttttagtgggtgaaatcaatgtaagatcaacactttggaactggaaccca--taaagtggtgggacatatattgattttacccaataaagg 6263929  T
Q  207 agtgagtgctagaga 221  Q
    |||||||| ||||||    
T  6263928 agtgagtgatagaga 6263914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 13456236 - 13456193
Alignment:
Q  178 ggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||| ||||||||||||||||| | |||||||||||||||||||    
T  13456236 ggacctacattgatttcacctaataaaagagtgagtgctagaga 13456193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 28490793 - 28490871
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||  |||||||||  ||| ||||||||||||||||| ||||||||| | | | ||| ||||| |||||||||    
T  28490793 ctacactttcaaaattgaacttacacaaagtggtgggacatactttgatttcatccaataaaaaagtgaatgctagaga 28490871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 37455458 - 37455408
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||| ||||||||||| || ||| |||||| ||||||||||||||    
T  37455458 ctacactttgaaaattgaacccccacaaaatggtggaacatacattgattt 37455408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 34384768 - 34384833
Alignment:
Q  149 tttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtg 214  Q
    |||| ||||||||| |||| ||| | ||||||||||||||||||||||| | | ||||| ||||||    
T  34384768 tttgaaaattgaactcacacaaaatagtgggacatacattgatttcacccaataaaagaatgagtg 34384833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 41105644 - 41105693
Alignment:
Q  146 cactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||||| |||||||||||||| ||||| ||||||||| | |||||||||    
T  41105644 cactttgaaaattgaacccacacaaagtagtgggacatcccttgatttca 41105693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 2443684 - 2443716
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  2443684 aggaatgctagcaacactctcttttgagcactc 2443716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 4959276 - 4959308
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  4959276 aggaatgctagcaacactctcttttgagcactc 4959308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 28090304 - 28090352
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||| ||||||||| |||| |||||||||||||||  ||||||||||    
T  28090304 actttgaaaattgaactcacacaaagtggtgggacatgaattgatttca 28090352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 32153850 - 32153766
Alignment:
Q  93 cactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtg 177  Q
    ||||||||||  |||||||||| | ||||| | | ||| | |||| || || ||||||||||||| || ||||||||||||||||    
T  32153850 cactctctttctaacactcactctcttattgggtgaaacccatgtggatcccacactttggaaatggatcccacataaagtggtg 32153766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 34368544 - 34368512
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  34368544 aggaatgctagcaacactctcttttgagcactc 34368512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 42224773 - 42224741
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  42224773 aggaatgctagcaacactctcttttgagcactc 42224741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 43405502 - 43405450
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||||||||||||| ||||  | | ||||||||| |||||||||||||||||    
T  43405502 ctacactttggaaatagaacatatacaaagtggtgagacatacattgatttca 43405450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 19737470 - 19737584
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||| | ||| |||||||||||||||| | ||||||    
T  19737470 cactcactcttttattggctcaaatcaatgtaggacctacactttggaaatgaaacccacataaagtgataggatatacattgatttcacccaattaaag 19737569  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  19737570 agtgagtgctagaga 19737584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 19090250 - 19090364
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | || ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||    
T  19090250 cactcactcttttattggttgaattcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaag 19090349  T
Q  207 agtgagtgctagaga 221  Q
    |||| ||||||||||    
T  19090350 agtgggtgctagaga 19090364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 105 - 221
Target Start/End: Original strand, 35128756 - 35128872
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||||||| ||||||||| | | |||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| | | ||    
T  35128756 aacactcatttttttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacatacattgattttacccaataaa 35128855  T
Q  205 agagtgagtgctagaga 221  Q
    ||||||| |||||||||    
T  35128856 agagtgactgctagaga 35128872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 10061006 - 10060900
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||||||||||||||||| | | | |||||||||| |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| || | ||    
T  10061006 aacactcacttttttattgggtgagatcaatgtaggacctacactttgaaaatggaacccacataaagtggcgggacatacattgatttcacataataaa 10060907  T
Q  205 agagtga 211  Q
    |||||||    
T  10060906 agagtga 10060900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 6531354 - 6531447
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||| ||||||| |||||||||| |||||| |||| |||||||||| ||||||||||||||||||||||| | | |||||||||||||| ||||    
T  6531354 aaattaatgtaggacctacacttcggaaatggaactcacataaagtagtgggacatacattgatttcacccaataaaagagtgagtgctggaga 6531447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 221
Target Start/End: Complemental strand, 373562 - 373430
Alignment:
Q  87 tagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacataca 186  Q
    |||||||||||||| |  |||||| ||| ||||||| | | |||||||||||| |||||| ||||| |||| ||| |||||||||||| |||||||||||    
T  373562 tagcaacactctctct--aacacttactattttattggataaaatcaatgtaggacctaccctttgaaaatggaatccacataaagtgctgggacataca 373465  T
Q  187 ttgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||| ||| | | ||| |||| ||||||||||    
T  373464 ttgattttacccaataaaaaagtgggtgctagaga 373430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 6992281 - 6992383
Alignment:
Q  82 aatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggac 181  Q
    |||||||||||||||||||||| | |||||| | |||||||   | |||||||||||| |||||||||||||||||  ||| |||||||||||||| |||    
T  6992281 aatgctagcaacactctcttttaagcactcattcttttattgagtaaaatcaatgtaggacctacactttggaaatgaaactcacataaagtggtgagac 6992380  T
Q  182 ata 184  Q
    |||    
T  6992381 ata 6992383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 4595887 - 4595773
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| |||| || | | |||| ||||||| || ||||||||| |||| ||||||| | ||||||||| ||||||||||||||||||  | | ||||    
T  4595887 cactcactcttttctttggtgaaattaatgtaggacttacactttgaaaatggaacccataaaaagtggtgagacatacattgatttcactcaataaaag 4595788  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  4595787 agtgagtgctagaga 4595773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 34905445 - 34905367
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||||| | | | |||||||||||| ||||||    
T  34905445 ctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgttagaga 34905367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 445923 - 445848
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagagat 222  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||| | | | ||| ||||||||||||||||    
T  445923 actttgaaaattgaacccacacaaagtggtgtgacatacattgatttcatccaataaaaaagtgagtgctagagat 445848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 10133229 - 10133307
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| | |||||| | | | || ||||||||| ||||||    
T  10133229 ctacactttgaaaattgaacccccataaagtggtgggacatacaataatttcatccaataaatgagtgagtgttagaga 10133307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 21987401 - 21987327
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||||||||| |||| | ||||||||||||||| |||||||||||||| | | | ||| |||||||||||    
T  21987401 ctacactttggaaatagaactcgcataaagtggtgggatatacattgatttcatccaataaaatagtgagtgcta 21987327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 5106406 - 5106357
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||||    
T  5106406 tacactttgaaaattgatcccacacaaagtggtgggacatacattgattt 5106357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 10060857 - 10060889
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    |||||||||||||||||||||||||||||||||    
T  10060857 aggaatgctagcaacactctcttttgaacactc 10060889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 12780830 - 12780886
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcaccta 199  Q
    |||||||||| |||||||||| ||| ||||| ||| |||||||||||||| ||||||    
T  12780830 ctacactttgaaaattgaaccaacacaaagtagtgagacatacattgattccaccta 12780886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 12794870 - 12794938
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcac 196  Q
    |||| ||||||| ||||||| |||| ||||  ||| ||||||||||||||||| ||||||| |||||||    
T  12794870 aaattaatgtaggacctacattttgaaaatgaaactcacataaagtggtgggatatacattaatttcac 12794938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 16852044 - 16852096
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||||||||||  | |||||||||||||||||||| ||||||    
T  16852044 ctacactttgaaaattgaacccctacaaagtggtgggacatacatttatttca 16852096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 31116196 - 31116247
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||| |||||||| |||| |||| ||||| |||||||||||||||||||||    
T  31116196 tacacattggaaatagaacacacacaaagtagtgggacatacattgatttca 31116247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 32122936 - 32122852
Alignment:
Q  110 tcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||||||||||| ||| |||||| ||| |  | ||||||||| ||||||||| | || ||| |||||||||||| ||||||||||    
T  32122936 tcacttttttattggcttaaatcattgtgggtc-tacactttgaaaattgaactcccacaaaatggtgggacatatattgatttca 32122852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 6992438 - 6992406
Alignment:
Q  82 aatgctagcaacactctcttttgaacactcact 114  Q
    |||||||||||||||||||||||| ||||||||    
T  6992438 aatgctagcaacactctcttttgagcactcact 6992406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 12753942 - 12753910
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||| |||||||||||||    
T  12753942 aggaatgctagcaacactcacttttgaacactc 12753910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 32599019 - 32599063
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacat 187  Q
    ||||||||||||||| | ||||||| ||||||| |||||||||||    
T  32599019 ctacactttggaaatagcacccacacaaagtggcgggacatacat 32599063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 34882241 - 34882273
Alignment:
Q  82 aatgctagcaacactctcttttgaacactcact 114  Q
    |||||||||||||||||||||| ||||||||||    
T  34882241 aatgctagcaacactctcttttcaacactcact 34882273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 42183034 - 42182920
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||| ||| ||||||| | | |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||    
T  42183034 cactaactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaag 42182935  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  42182934 agtgagtgctagaga 42182920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 28898072 - 28898186
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | |||||||||||| | |||||||||||||||  |||||||||||||||||||||||||||||||||||||| | | ||||    
T  28898072 cactcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacataaagtggtgggacatacattgatttcacccaataaaag 28898171  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  28898172 agtgagtgctagaga 28898186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 221
Target Start/End: Complemental strand, 1110345 - 1110229
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||| ||||| ||||||| | | |||||||||||| || || ||||||||||| ||||||||||||||||||||||||||||||||||||||  | | ||    
T  1110345 aacattcactcttttattgggtgaaatcaatgtaggacatatactttggaaatggaacccacataaagtggtgggacatacattgatttcactcaataaa 1110246  T
Q  205 agagtgagtgctagaga 221  Q
    |||||||||| ||||||    
T  1110245 agagtgagtgttagaga 1110229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 37228644 - 37228529
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattga-tttcacctatttaaa 205  Q
    |||||||||||||||| | | |||||||||||| |||| ||||||| |||  |||||||||||||||||||||||||||||| | ||||||| | | |||    
T  37228644 cactcacttttttattgggtgaaatcaatgtaggacctgcactttgaaaacggaacccacataaagtggtgggacatacattaattttcacccaataaaa 37228545  T
Q  206 gagtgagtgctagaga 221  Q
    ||||||||||||||||    
T  37228544 gagtgagtgctagaga 37228529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 4964708 - 4964822
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||| ||||||| | | | |||||||||| |||||||||||| ||||  || ||||||||||||||||||||||||||||||||||| | | |||     
T  4964708 cactcactcttttattggataagatcaatgtaggacctacactttgaaaatgaaatccacataaagtggtgggacatacattgatttcacccaataaaaa 4964807  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  4964808 agtgagtgctagaga 4964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 217
Target Start/End: Original strand, 31395454 - 31395590
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgg 178  Q
    |||| ||||||||||||||||| | |  |||||| | ||||||| | | |||| ||||||| ||||||||| ||||||| ||| ||||||||||||| ||    
T  31395454 aggagtgctagcaacactctctctag--cactcaatcttttattgggtgaaataaatgtaggacctacactatggaaatggaatccacataaagtggagg 31395551  T
Q  179 gacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||||||||||||| | | || ||||||||||||    
T  31395552 gacatacattgatttcacccaataaaggagtgagtgcta 31395590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 15509038 - 15508947
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctaga 219  Q
    |||||||||||| | ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||  | | |||||||||||| ||||    
T  15509038 aaatcaatgtaggatctacactttggaaatggaacccacaaaaaatggtgggacatacattgatttcactcaataaaagagtgagtgttaga 15508947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 33746948 - 33747043
Alignment:
Q  100 ttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||| |||||||||||||||| | | ||| |||||| ||||||| ||||| ||||| ||||| | |||||||||||||||||| ||||||||||    
T  33746948 ttttgagcactcacttttttattggatgaaaacaatgtggaacctatactttagaaatggaaccaatataaagtggtgggacatatattgatttca 33747043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 9470190 - 9470112
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||||| | ||||||||||||||||||||||||||| | | | |||||||||||| ||||||    
T  9470190 ctacactttgaaaattgaacccaaacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgttagaga 9470112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 6315782 - 6315715
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||| ||||||| ||||||||||||||||| ||||| | |||||||||||| ||||||||||||||||    
T  6315782 aaattaatgtaggacctacactttggaaatggaacctatataaagtggtggaacatacattgatttca 6315715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 7919280 - 7919382
Alignment:
Q  81 gaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtggga 180  Q
    ||||||||||||||||||||||||| |||| ||| | ||||| | | |||||| ||| || | ||||||||| |||||||| ||||| ||||||||||||    
T  7919280 gaatgctagcaacactctcttttgagcacttactctcttattggtttaaatcattgtggatc-tacactttgaaaattgaatccacacaaagtggtggga 7919378  T
Q  181 cata 184  Q
    ||||    
T  7919379 cata 7919382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 26767832 - 26767910
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||| |||| ||||||||||| || ||||||||||||||||||||||||||| | | | ||||||| |||||||||||    
T  26767832 ctacaatttgaaaattgaaccctcacaaagtggtgggacatacattgatttcatccagtaaaagagtaagtgctagaga 26767910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 1107123 - 1107069
Alignment:
Q  167 ataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||||||||||||||||||||||||| | | |||||||| ||||||||||    
T  1107123 ataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagaga 1107069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 44274343 - 44274293
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||| || ||||||||||| |||||||||||||||||||||||||    
T  44274343 ctacactttgaaagttgaacccacacaaagtggtgggacatacattgattt 44274293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 18511283 - 18511351
Alignment:
Q  146 cactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtg 214  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||| | | | | ||||||||||||    
T  18511283 cactttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtg 18511351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 24895300 - 24895408
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||||||||| ||| ||| | | |||||||||| |  | |||||||||||||| |||| |||||||| |||||| | |||||||||||| | | ||| ||    
T  24895300 aacactcactctttcattgggttaaatcaatgtgggtcatacactttggaaatggaactcacataaaatggtggaatatacattgattttatccattaaa 24895399  T
Q  205 agagtgagt 213  Q
    |||||||||    
T  24895400 agagtgagt 24895408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 45554650 - 45554598
Alignment:
Q  169 aaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||||||||||||||||||||| | | | |||||||||||||||||||    
T  45554650 aaagtggtgggacatacattgatttcatccaataaaagagtgagtgctagaga 45554598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 12989300 - 12989229
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtg 214  Q
    |||||||| |||||| ||| ||| | ||||||||||||||||||||||||||| | | | ||||||||||||    
T  12989300 ctacacttcggaaatagaatccatacaaagtggtgggacatacattgatttcatccaatgaaagagtgagtg 12989229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 37652284 - 37652390
Alignment:
Q  110 tcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagt 209  Q
    ||||||||||||| | | |||||| ||| ||| |||||| |||||||||||||  ||| |||| ||||| |||||||||||||||| ||| | ||| |||    
T  37652284 tcacttttttattggtttaaatcattgt-gaatctacacgttggaaattgaacatacacaaaggggtggaacatacattgatttcatctaataaaaaagt 37652382  T
Q  210 gagtgcta 217  Q
     |||||||    
T  37652383 aagtgcta 37652390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 6980195 - 6980269
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||| ||||||||| |||| |||||||| | |||||| ||||||||| | | | |||||||||||||||||||    
T  6980195 actttgaaaattgaactcacacaaagtggtagaacataccttgatttcatccaataaaagagtgagtgctagaga 6980269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 10981627 - 10981582
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacatt 188  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||    
T  10981627 ctacacattggaaatagaacccacacaaagtggtgggacatacatt 10981582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 37719872 - 37719949
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacata 184  Q
    |||||||| ||||||| | | |||||||||||| || |||||||| ||||| ||| |||| |||| ||||||||||||    
T  37719872 cactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaatccacttaaaatggtgggacata 37719949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 38104356 - 38104307
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||| ||| ||||||| |||||||||||| ||||||||||||||    
T  38104356 tacactttgggaatggaacccaaataaagtggtggaacatacattgattt 38104307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 221
Target Start/End: Complemental strand, 10339857 - 10339797
Alignment:
Q  161 acccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||||||||||||||||| |||||||||  || | | ||| |||||||||||||||    
T  10339857 acccacataaagtggtgggacattcattgattttccccaataaaatagtgagtgctagaga 10339797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 38464272 - 38464220
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||||||||||||  |||||| || |||||||||||||||||    
T  38464272 ctacactttgaaaattgaacccacgcaaagtgatgagacatacattgatttca 38464220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 6315668 - 6315727
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgta 138  Q
    ||||||| |||||||||||||||||||  ||||||||||||| | | | |||||||||||    
T  6315668 aggaatgttagcaacactctcttttgagtactcacttttttactggatgaaatcaatgta 6315727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 37398847 - 37398938
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcac 196  Q
    |||||| ||||||||||| | | ||||| |||||| |||||||||||| ||||  ||| || ||||| |||||  ||||| |||||||||||    
T  37398847 aacacttacttttttattggatgaaatccatgtaggacctacactttgaaaataaaactcatataaaatggtgaaacatatattgatttcac 37398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 42669740 - 42669791
Alignment:
Q  82 aatgctagcaacactctcttttgaacactcacttttttattagctcaaatca 133  Q
    ||||||||||||||| |||||| |||||||||||||| ||| ||| ||||||    
T  42669740 aatgctagcaacactatcttttcaacactcactttttaattggcttaaatca 42669791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 2476643 - 2476565
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||| |||| ||||||||   ||| ||||| ||||||||||||||||||| | ||| | ||||||| |||||||||||    
T  2476643 ctacattttgaaaattgaagttacacaaagtagtgggacatacattgattttatctaataaaagagtaagtgctagaga 2476565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 16719501 - 16719567
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagt 209  Q
    ||||| |||| |||||||||| |||| || |||||||| |||||||||||||| ||| | |||||||    
T  16719501 ctacattttgaaaattgaacctacatgaaatggtgggatatacattgatttcatctaataaaagagt 16719567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 3804693 - 3804641
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtggg-acatacattgatttca 195  Q
    ||||||||| ||||| |||| |||||||||| |||| ||||||||||||||||    
T  3804693 tacactttgaaaattaaacctacataaagtgatggggacatacattgatttca 3804641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 15508912 - 15508944
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||| |||||||||||||||||||||||||    
T  15508912 aggaatgttagcaacactctcttttgaacactc 15508944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 15884538 - 15884498
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacat 183  Q
    ||||| |||| |||||||||||||| |||||||||||||||    
T  15884538 ctacattttgaaaattgaacccacacaaagtggtgggacat 15884498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 19193498 - 19193530
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||| |||||||    
T  19193498 aggaatgctagcaacactctcttttcaacactc 19193530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 20951604 - 20951636
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  20951604 aggaatgctagcaacactctcttttgagcactc 20951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 33678297 - 33678265
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||| |||||||||||||    
T  33678297 aggaatgctagcaacactcacttttgaacactc 33678265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 34142210 - 34142254
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacat 187  Q
    |||||||||| |||||||||||||| ||||| ||| |||||||||    
T  34142210 ctacactttgaaaattgaacccacacaaagtagtgagacatacat 34142254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 42183074 - 42183042
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||| |||||||||||||||||||||    
T  42183074 aggaatgctagtaacactctcttttgaacactc 42183042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 6e-30; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 54140928 - 54141042
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    ||||||||  |||||| | | ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| | | || |    
T  54140928 cactcactcatttattggatgaaatcaatgtagaacctacactttgaaaatggaacccacgtaaagtggtgggacatacattgatttcacccaataaatg 54141027  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  54141028 agtgagtgctagaga 54141042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 37600189 - 37600279
Alignment:
Q  131 tcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | | |||||||| ||||||||||    
T  37600189 tcaatgtaggacctacactttagaaatggaacccacataaagtggtgggacatacattgatttcacccaataaaagagtgggtgctagaga 37600279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 357905 - 357791
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||||||||||| | | ||||||||||||   ||||||||||||||| ||||||||||||||||||| | |||||||||||||| |  | | ||||    
T  357905 cactcacttttttattggatgaaatcaatgtaggtactacactttggaaatggaacccacataaagtggtgaggcatacattgatttccctcaataaaag 357806  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  357805 agtgagtgctagaga 357791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 221
Target Start/End: Original strand, 50661529 - 50661671
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgg 178  Q
    |||| ||||| ||||||||||||||||||||||  | ||||||| | | |||||||||| |  | |||| ||||||||| ||||||||||||||||||||    
T  50661529 aggactgctatcaacactctcttttgaacactctttcttttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgg 50661628  T
Q  179 gacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||| ||||||||| | ||| | ||||||| |||| ||||||    
T  50661629 gacatgcattgattttatctaataaaagagtaagtgttagaga 50661671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 46237102 - 46237195
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| | | | ||||||||| |||||||||    
T  46237102 aaatcaatgtaggacctacattttagaaatggaacccacataaagtggtgggacatacattgatttcatccaataaaagagtgattgctagaga 46237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 24748943 - 24749035
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    |||||||||| ||||||| | | |||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||    
T  24748943 aacactcactcttttattggatgaaatcaatgtaggacctacactttagaaatggaacccacataaaatggtgggacatacattgatatcacc 24749035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 10769760 - 10769850
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    |||| ||| ||||||| | | |||||||||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  10769760 cacttactcttttatttgatgaaatcaatgtaggacctacactttagaaatggaacccatataaagtggtgggacatacattgatttcacc 10769850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 43657065 - 43657145
Alignment:
Q  141 acctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | | | ||| |||||||||||||||    
T  43657065 acctacactttggaaatggaactcacataaagtggtgggacatacattgatttcatcaaataaaatagtgagtgctagaga 43657145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 37776774 - 37776852
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| ||| | |||||||||||||| ||||    
T  37776774 ctacactttgaaaattgaacccacacaaagtggtaggacatacattgatttcatctaataaaagagtgagtgctggaga 37776852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 27243153 - 27243076
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| | | | | |||||||||||| ||||||    
T  27243153 tacactttggaaatggaacccacataaagtggtgggacatgcattgattttatccaataaaagagtgagtgttagaga 27243076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 222
Target Start/End: Original strand, 38928042 - 38928159
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||||||||| ||||||| | | |||||||||||  ||||||||||||||||| ||||||| ||||||| | |||| |||||||||||| ||| | | ||    
T  38928042 aacactcactcttttattgggtgaaatcaatgtaagacctacactttggaaatggaacccatataaagtagagggatatacattgattttacccaataaa 38928141  T
Q  205 agagtgagtgctagagat 222  Q
    ||| ||| | ||||||||    
T  38928142 agactgaatactagagat 38928159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 222
Target Start/End: Complemental strand, 24734815 - 24734735
Alignment:
Q  142 cctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagagat 222  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||| | | | ||||||||||| ||||||||    
T  24734815 cctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagagtgagtactagagat 24734735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 28529360 - 28529284
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||||||| |  |||||||||||||||||||||||| | | | |||||||||||||||||||    
T  28529360 ctacactttgaaaattgaacccacaca--gtggtgggacatacattgatttcatccaataaaagagtgagtgctagaga 28529284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 41451966 - 41452045
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagagat 222  Q
    |||| ||||| |||||||||||||| ||||||||||||||||| ||||||||| | | | ||||||||||| ||||||||    
T  41451966 ctactctttgaaaattgaacccacacaaagtggtgggacatactttgatttcatccaataaaagagtgagtactagagat 41452045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 46450175 - 46450096
Alignment:
Q  143 ctacactttggaaattgaacccacataaa-gtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||| ||||||||| ||| ||||||||||||||||||||| || ||| | |||||||||||||||||||    
T  46450175 ctacactttgcaaatagaacccacacaaaagtggtgggacatacattgattccatctaataaaagagtgagtgctagaga 46450096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 20791405 - 20791331
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||||||||| |||| | |||||||||||||||||||||||||||||| | | | ||| |||||||||||    
T  20791405 ctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcta 20791331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 26310517 - 26310595
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||| ||| ||| ||||||||||||||||||||||| | | | ||||||| |||||||||||    
T  26310517 ctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagtaagtgctagaga 26310595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 8825054 - 8825128
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||| ||||||||||| |||||| |||||||||||| |||||||||| ||| | |||| |||||| |||||||    
T  8825054 actttgaaaattgaacccgcataaaatggtgggacatatattgatttcatctaataaaagggtgagtactagaga 8825128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 13809186 - 13809140
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  13809186 actttggaaatggaacccacataaaatggtgggacatacattgattt 13809140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 14236128 - 14236054
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||||||||| |||| | ||||||||||||||||||| |||||||||| | | | ||| |||||||||||    
T  14236128 ctacactttggaaatagaactcgcataaagtggtgggacatatattgatttcatccaataaaatagtgagtgcta 14236054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 46161056 - 46160978
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||||||||| ||||| ||| |||||||| ||||||  |||||||||| | | | |||||||||||||||||||    
T  46161056 ctacactttggaaatagaaccaacacaaagtggtcggacatgtattgatttcatccaataaaagagtgagtgctagaga 46160978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 55452025 - 55452130
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgg 178  Q
    |||||||||||||||||||||| |  || ||||||| ||| ||| | | |||||| | | ||  ||||||||||||||| ||||||||| ||||||||||    
T  55452025 aggaatgctagcaacactctctct--aatactcactctttcattggtttaaatcattat-gagtctacactttggaaatagaacccacacaaagtggtgg 55452121  T
Q  179 gacatacat 187  Q
    |||||||||    
T  55452122 gacatacat 55452130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 18427221 - 18427273
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||| ||||||||| ||| |||||||||||||||||||||||    
T  18427221 ctacactttgaaaatagaacccacacaaaatggtgggacatacattgatttca 18427273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 21232604 - 21232647
Alignment:
Q  154 aaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    |||| |||||||||||||||||||| ||||||||||||||||||    
T  21232604 aaatggaacccacataaagtggtggaacatacattgatttcacc 21232647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 29775137 - 29775243
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc----------acttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacat 168  Q
    ||||||||||||||||||||||||||| |||||          ||| ||||||| | | ||||||| |||| ||||||||||||||||| ||||||||||    
T  29775137 aggaatgctagcaacactctcttttgagcactctctctagcacactcttttattgggtgaaatcaaggtaggacctacactttggaaatggaacccacat 29775236  T
Q  169 aaagtgg 175  Q
    || ||||    
T  29775237 aatgtgg 29775243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 20493516 - 20493594
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| | ||||||||| || |||||||| |||||||||||||||||| | | | || ||||||||| ||||||    
T  20493516 ctacactttgaatattgaacccccacaaagtggtaggacatacattgatttcatccaataaatgagtgagtgttagaga 20493594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 5452131 - 5452183
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||| | |||||||| ||||| |||||||||||| ||||||||||||||    
T  5452131 ctacacttagaaaattgaatccacacaaagtggtgggaaatacattgatttca 5452183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 19345071 - 19345123
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||| |||| |||||||||||  | |||||||||||||||||||||||||||    
T  19345071 ctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttca 19345123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 44844128 - 44844040
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||||||||||| | | |||||| ||| |  | ||||||||  ||||||||| ||||| || |||||||||||||||| ||||    
T  44844128 aacactcacttttttattggattaaatcattgtgggtcatacactttaaaaattgaactcacatgaaatggtgggacatacatttattt 44844040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 40715944 - 40716011
Alignment:
Q  154 aaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||||||| |||||| || | |||||||| ||||||||   | |||||||||||||||||||    
T  40715944 aaattgaacccacacaaagtgatgagtcatacattaatttcaccatataaaagagtgagtgctagaga 40716011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 46576056 - 46576005
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||| |||| |||| ||||||||| ||||||||||||||||||||| |||||    
T  46576056 tacattttgaaaatggaacccacaaaaagtggtgggacatacattggtttca 46576005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 29588804 - 29588854
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||| ||||||||| |||||||||||   ||||||||||||||||    
T  29588804 ctacactttgaaaattgaactcacataaagtgaaaggacatacattgattt 29588854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 5452061 - 5452090
Alignment:
Q  82 aatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||||||    
T  5452061 aatgctagcaacactctcttttgaacactc 5452090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 24734886 - 24734857
Alignment:
Q  82 aatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||||||    
T  24734886 aatgctagcaacactctcttttgaacactc 24734857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 37926655 - 37926562
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||||||  ||  ||||||| |||| |  |||||||||||| || |||| ||||||||||||||||| | | | |||||||| ||||||    
T  37926655 aaatcaatgtaggtcccgcactttgaaaatgggtcccacataaagtagtaggacctacattgatttcacctaataagaaagtgagtgttagaga 37926562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 39186073 - 39186028
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacatt 188  Q
    ||||||||||||||| |||| | |||||||||||| ||||||||||    
T  39186073 ctacactttggaaatagaactcgcataaagtggtgagacatacatt 39186028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 48351544 - 48351495
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    ||||||||| |||||||||||||| ||||| ||| |||||| ||||||||    
T  48351544 tacactttgaaaattgaacccacacaaagtagtgagacatatattgattt 48351495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 52123955 - 52123984
Alignment:
Q  82 aatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||||||    
T  52123955 aatgctagcaacactctcttttgaacactc 52123984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 752501 - 752461
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacat 183  Q
    ||||||||| ||||| ||||||||| |||||||||||||||    
T  752501 ctacactttagaaatagaacccacacaaagtggtgggacat 752461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 217
Target Start/End: Complemental strand, 3314080 - 3313996
Alignment:
Q  133 aatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||| ||||||||||||| ||||| ||||| ||||||| || || || || ||||||||||| ||| | ||| ||||| |||||    
T  3314080 aatgtggaacctacacttttgaaatggaacctacataaaatgatgagaaatgcattgatttcatctaataaaatagtgaatgcta 3313996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 10769907 - 10769875
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||| |||||    
T  10769907 aggaatgctagcaacactctcttttgagcactc 10769875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 27243047 - 27243075
Alignment:
Q  83 atgctagcaacactctcttttgaacactc 111  Q
    |||||||||||||||||||||||||||||    
T  27243047 atgctagcaacactctcttttgaacactc 27243075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Complemental strand, 27243230 - 27243198
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    |||| ||||||||||||||||||||||||||||    
T  27243230 aggagtgctagcaacactctcttttgaacactc 27243198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 38414756 - 38414708
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgat 191  Q
    |||||||||  ||||| |||||||| ||| |||||||||||||||||||    
T  38414756 ctacactttaaaaattaaacccacacaaaatggtgggacatacattgat 38414708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 46160947 - 46160979
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||| |||||||||||||    
T  46160947 aggaatgctagcaacactcacttttgaacactc 46160979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 46450065 - 46450097
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||| |||||||||||||    
T  46450065 aggaatgctagcaacactcacttttgaacactc 46450097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 52124027 - 52124079
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| ||||||||||| || ||| | |||||||||||||| ||||||    
T  52124027 ctacactttgaaaattgaacccccacaaaatagtgggacatacattaatttca 52124079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 43026412 - 43026322
Alignment:
Q  131 tcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||||| ||||| | ||| |||||||||||||||    
T  43026412 tcaatgtaggacctacactttggaaatggaacccacataaagtggcaggacatacattgattttacctaataaaaaagtgagtgctagaga 43026322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 221
Target Start/End: Original strand, 7599455 - 7599571
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    ||||||||||||||||||   | |||||||||||| ||||||||||||||||  |||||||||||||||| ||||| |||||||||||||| | | | ||    
T  7599455 aacactcacttttttattgagtaaaatcaatgtaggacctacactttggaaaaggaacccacataaagtgctgggatatacattgatttcatccaataaa 7599554  T
Q  205 agagtgagtgctagaga 221  Q
    |||||  ||||||||||    
T  7599555 agagtaggtgctagaga 7599571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 91 - 217
Target Start/End: Complemental strand, 1205986 - 1205862
Alignment:
Q  91 aacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattga 190  Q
    |||||||||||| |  |||||||| |||||||   | |||||||||||  ||||||||||||||||| ||||||| ||||||||||| |||||||||| |    
T  1205986 aacactctctttag--cactcactcttttattgagtgaaatcaatgtaagacctacactttggaaatagaacccatataaagtggtgagacatacattaa 1205889  T
Q  191 tttcacctatttaaagagtgagtgcta 217  Q
    ||| ||||| | |||||||||||||||    
T  1205888 ttttacctaataaaagagtgagtgcta 1205862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 35689625 - 35689511
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaag 206  Q
    |||||||||||||||| | | ||| |||||| | || ||||||||| |||| |||| |||||||||||||||||||||||||||||||| | | | |||     
T  35689625 cactcacttttttattgggtgaaaacaatgtgggacttacactttgaaaatggaactcacataaagtggtgggacatacattgatttcatccaataaaaa 35689526  T
Q  207 agtgagtgctagaga 221  Q
    |||||||||||||||    
T  35689525 agtgagtgctagaga 35689511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 33417847 - 33417735
Alignment:
Q  85 gctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacata 184  Q
    |||||||||||||||| | |  |||||||| |||||||   | |||| ||||||| |||||||||||||||||  ||||||||||||||||||| ||||     
T  33417847 gctagcaacactctctctag--cactcactcttttattgagtgaaattaatgtaggacctacactttggaaatgaaacccacataaagtggtggaacatg 33417750  T
Q  185 cattgatttcaccta 199  Q
    |||||||||||||||    
T  33417749 cattgatttcaccta 33417735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 32072206 - 32072128
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||  |||||||||||||| |||||||||||||||||||| |||||| | | | |||||||||||||||||||    
T  32072206 ctacactttaaaaattgaacccacacaaagtggtgggacatacattcatttcatccaataaaagagtgagtgctagaga 32072128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 34861262 - 34861336
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||||||| | | | |||||||||||||||||||    
T  34861262 actttgaaaattgaacctacacaaagtggtgggacatacattgatttcatccaataaaagagtgagtgctagaga 34861336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 1977244 - 1977322
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||| | |    ||||||||||||||||||    
T  1977244 ctacactttgaaaattgaacccacacaaagtggttggacatacattgatttcatccaacagaagagtgagtgctagaga 1977322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 6387666 - 6387592
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||| | | | | |||||||||||| ||||||    
T  6387666 actttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtgagtgttagaga 6387592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 23685240 - 23685167
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgct 216  Q
    ||||||||||||||| |||| | |||||||||||||||||||||||||||||| | | | ||| ||||||||||    
T  23685240 ctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgct 23685167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 28211942 - 28212035
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||||| ||||| |||||  |||| ||||||||||||| ||||| |||||| |||||||||||| | | ||  |||||||||||||||    
T  28211942 aaatcaatgtaggacctatactttaaaaatggaacccacataaaatggtgagacatatattgatttcacccaataaataagtgagtgctagaga 28212035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 107 - 196
Target Start/End: Original strand, 34303473 - 34303562
Alignment:
Q  107 cactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcac 196  Q
    |||| ||| ||||||| | | |||||||||||  |||||||||||| |||| ||| ||||||| ||||||| ||||||||||||||||||    
T  34303473 cactaactcttttattgggtgaaatcaatgtaagacctacactttgaaaatcgaagccacatagagtggtgagacatacattgatttcac 34303562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 8903961 - 8903909
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  8903961 ctacactttgaaaattgaaccgacacaaagtggtgggacatacattgatttca 8903909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 178
Target Start/End: Original strand, 23142813 - 23142921
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcact---------tttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacata 169  Q
    ||||||||||||||||||||||||||| ||||| ||         |||||||| | | ||| |||||| ||||||| ||||||||||| |||||||||||    
T  23142813 aggaatgctagcaacactctcttttgagcactctctagcattcattttttattgggtgaaaacaatgtggaacctagactttggaaatggaacccacata 23142912  T
Q  170 aagtggtgg 178  Q
    |||||||||    
T  23142913 aagtggtgg 23142921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 5979987 - 5979941
Alignment:
Q  145 acactttggaaattgaacccacataaagtggtgggacatacattgat 191  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  5979987 acactttgaaaattgaacccacacaaagtggtgggacatacattgat 5979941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 8914880 - 8914802
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||||| ||| | | | | |||||||||||| ||||||    
T  8914880 ctacactttgaaaaatgaacccacacaaagtggtgggacatacattggttttatccaatgaaagagtgagtgttagaga 8914802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 28413944 - 28414018
Alignment:
Q  147 actttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||| ||||||||| |||| ||||||||||||||||||||||||||| | | | ||| |||||| ||||||||    
T  28413944 actttgaaaattgaactcacacaaagtggtgggacatacattgatttcatcgaataaaaaagtgagcgctagaga 28414018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 214
Target Start/End: Original strand, 902410 - 902515
Alignment:
Q  109 ctcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagag 208  Q
    |||||||||||||| | | |||||||||| || ||||| |||||||||| |  ||||||||||||||||||||  |||| |||| |||| ||  || |||    
T  902410 ctcacttttttattgggtgaaatcaatgtggatcctacgctttggaaatgggtcccacataaagtggtgggacccacatggattccaccaataaaatgag 902509  T
Q  209 tgagtg 214  Q
    ||||||    
T  902510 tgagtg 902515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 9952829 - 9952906
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||| ||||||||| |||| ||||||||||||||| ||||||||||| | | | ||| | |||||||||||||    
T  9952829 tacactttgaaaattgaactcacacaaagtggtgggacatgcattgatttcatccaataaaaaaatgagtgctagaga 9952906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 25915175 - 25915088
Alignment:
Q  108 actcacttttttattagctcaaatcaatgtagaacct--acactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    ||||||| ||||||| | | |||||||||| ||||||  |||||||| |||| ||||||| ||||||| || ||||||||||||||||    
T  25915175 actcactcttttattgggtgaaatcaatgtggaacctctacactttgaaaatggaacccaaataaagtagtaggacatacattgattt 25915088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 17499304 - 17499382
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||| |||||||||| ||| ||| |||||||||||| |||||||||| | | | |||||  ||||||||||||    
T  17499304 ctacactttgaaaattgaaccaacacaaaatggtgggacatatattgatttcatccaataaaagatagagtgctagaga 17499382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 24055996 - 24056070
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    |||||||||| |||||||||  ||| |||||||||||||||||||| |||||| ||  | |||||| ||||||||    
T  24055996 ctacactttgaaaattgaacttacacaaagtggtgggacatacattaatttcatctgataaaagagcgagtgcta 24056070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 45246543 - 45246469
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||||||||| |||| | |||||||||||| ||||||||||||||| | | | | ||| |||||||||||    
T  45246543 ctacactttggaaatagaactcgcataaagtggtgagacatacattgattttatccaataaaatagtgagtgcta 45246469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 214
Target Start/End: Original strand, 10197751 - 10197860
Alignment:
Q  105 aacactcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaa 204  Q
    |||| ||| ||||||||| | | |||||||| |||| | |||||||| ||||| || ||||||||||||| || ||| |  ||||||||||| || | ||    
T  10197751 aacattcatttttttattgggtgaaatcaatatagatcttacactttagaaatagatcccacataaagtgatgagacttgtattgatttcacataataaa 10197850  T
Q  205 agagtgagtg 214  Q
    ||||||||||    
T  10197851 agagtgagtg 10197860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 13407396 - 13407445
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    ||||||||| |||| |||||||| |||| |||||||||||||||||||||    
T  13407396 tacactttgaaaatagaacccacttaaaatggtgggacatacattgattt 13407445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 13407319 - 13407351
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    |||||||||||||||||||||||||||||||||    
T  13407319 aggaatgctagcaacactctcttttgaacactc 13407351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 17716960 - 17716908
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| ||||| |||||||||||| | |||||||||| ||||||||||    
T  17716960 ctacactttgaaaattaaacccacataaaatagtgggacatatattgatttca 17716908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 17741598 - 17741650
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||| ||||||||| | || ||| |||||||||||||||||||||||    
T  17741598 ctacactttgaaaattgaactctcacaaaatggtgggacatacattgatttca 17741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 31301224 - 31301152
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgc 215  Q
    |||||| ||| |||| |||| |||| |||||||||| |||||||||||||||| | | | |||||||||||||    
T  31301224 ctacacattgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaataaaagagtgagtgc 31301152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 9192099 - 9192060
Alignment:
Q  154 aaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  9192099 aaattgaacccacacaaagtggtgggatatacattgattt 9192060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 36804916 - 36804959
Alignment:
Q  149 tttggaaattgaacccacataaagtggtgggacatacattgatt 192  Q
    |||| |||||||||||||| ||| ||||||||||||||||||||    
T  36804916 tttgaaaattgaacccacacaaaatggtgggacatacattgatt 36804959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 193
Target Start/End: Complemental strand, 1961391 - 1961341
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||||||||| |||||||||||||  ||||||||||||| ||| |||||||    
T  1961391 ctacactttgaaaattgaacccacgcaaagtggtgggacgtaccttgattt 1961341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 1961439 - 1961410
Alignment:
Q  82 aatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||||||    
T  1961439 aatgctagcaacactctcttttgaacactc 1961410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 16983575 - 16983546
Alignment:
Q  82 aatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||||||    
T  16983575 aatgctagcaacactctcttttgaacactc 16983546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 35151728 - 35151757
Alignment:
Q  82 aatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||||||||||||||    
T  35151728 aatgctagcaacactctcttttgaacactc 35151757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 35797503 - 35797426
Alignment:
Q  144 tacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||||||  ||||||||| | || |||||||||| |||||||||||||| | | | | ||||||||| |||||||||    
T  35797503 tacactttaaaaattgaactcgcacaaagtggtggaacatacattgattttatccaataaaagagtgaatgctagaga 35797426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 35151800 - 35151852
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    |||||||||  |||||||| || || ||| |||||||||||||||||||||||    
T  35151800 ctacactttaaaaattgaatccccacaaaatggtgggacatacattgatttca 35151852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 111
Target Start/End: Original strand, 43506536 - 43506568
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactc 111  Q
    ||||||||||||||||||| |||||||||||||    
T  43506536 aggaatgctagcaacactcacttttgaacactc 43506568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 30951 - 31057
Alignment:
Q  110 tcacttttttattagctcaaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagt 209  Q
    ||||||||||||| | | | ||||||||||||||||||||||| |||  ||||||| ||||||||||  ||||||| || |||||||||| | ||| |||    
T  30951 tcacttttttattgggtgacatcaatgtagaacctacactttgaaaacggaacccatataaagtggtatgacatacgttaatttcacctaataaaaaagt 31050  T
Q  210 gagtgct 216  Q
    |||||||    
T  31051 gagtgct 31057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 27921 - 27847
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgcta 217  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||||| || | | | |||| ||||||||||    
T  27921 ctacactttggaaatagaacccacacaaagtggtgggacatacattgattccatccaataaaagcgtgagtgcta 27847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 27438 - 27368
Alignment:
Q  128 aaatcaatgtagaaccta-cactttggaaattgaacccacataaagtggtgggacatacattgatttcacc 197  Q
    |||||||||||| || || ||||||| |||| ||||| |||||||||||||||||||| ||||||||||||    
T  27438 aaatcaatgtaggacataacactttgaaaatggaacctacataaagtggtgggacatatattgatttcacc 27368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 9773 - 9695
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||  |||||||||||||| ||| |||||||| |||||||||||||| | | | ||| |||||||| ||||||    
T  9773 ctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagaga 9695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 9676 - 9733
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgta 138  Q
    |||||||||||||||||||||| |  |||||||||||||||||| | | |||||||||||    
T  9676 aggaatgctagcaacactctctct--aacactcacttttttattggatgaaatcaatgta 9733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 11319 - 11241
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    |||||||||  |||||||||||||| ||| |||||||| |||||||||||||| | | | ||| |||||||| ||||||    
T  11319 ctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtgttagaga 11241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 11222 - 11279
Alignment:
Q  79 aggaatgctagcaacactctcttttgaacactcacttttttattagctcaaatcaatgta 138  Q
    |||||||||||||||||||||| |  |||||||||||||||||| | | |||||||||||    
T  11222 aggaatgctagcaacactctctct--aacactcacttttttattggatgaaatcaatgta 11279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 193
Target Start/End: Original strand, 26933 - 26983
Alignment:
Q  143 ctacactttggaaattgaacccacataaagtggtgggacatacattgattt 193  Q
    |||| ||||| |||||||||||||| |||||||||| ||||||||||||||    
T  26933 ctacgctttgaaaattgaacccacacaaagtggtggaacatacattgattt 26983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 195
Target Start/End: Complemental strand, 35718 - 35651
Alignment:
Q  128 aaatcaatgtagaacctacactttggaaattgaacccacataaagtggtgggacatacattgatttca 195  Q
    ||||| |||| || |||||| ||||  ||| ||||||||||||| || ||||||||||||||||||||    
T  35718 aaatctatgtggatcctacattttgagaatggaacccacataaaatgatgggacatacattgatttca 35651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 2311 - 2253
Alignment:
Q  163 ccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||| ||||| ||| ||||||||||||||||| ||  | |||||||||||||||||||    
T  2311 ccacacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagaga 2253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 2342 - 2284
Alignment:
Q  163 ccacataaagtggtgggacatacattgatttcacctatttaaagagtgagtgctagaga 221  Q
    ||||| ||||| ||| ||||||||||||||||| ||  | |||||||||||||||||||    
T  2342 ccacacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctagaga 2284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University