View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20315_low_21 (Length: 271)

Name: NF20315_low_21
Description: NF20315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20315_low_21
NF20315_low_21
[»] chr6 (23 HSPs)
chr6 (1-267)||(4507020-4507286)
chr6 (1-265)||(4513732-4513999)
chr6 (32-109)||(4483576-4483653)
chr6 (1-181)||(4558320-4558500)
chr6 (1-181)||(4586827-4587007)
chr6 (141-265)||(4483654-4483768)
chr6 (32-109)||(4496104-4496181)
chr6 (144-238)||(4627288-4627382)
chr6 (2-238)||(4599302-4599537)
chr6 (144-238)||(4298394-4298488)
chr6 (161-241)||(4255552-4255632)
chr6 (101-181)||(4572161-4572241)
chr6 (1-181)||(4581209-4581389)
chr6 (1-60)||(3173319-3173378)
chr6 (1-46)||(4561992-4562037)
chr6 (144-235)||(4259072-4259163)
chr6 (1-48)||(4575783-4575830)
chr6 (144-235)||(4623448-4623539)
chr6 (9-60)||(4503054-4503105)
chr6 (11-50)||(4618627-4618666)
chr6 (11-58)||(4623625-4623672)
chr6 (1-50)||(4488950-4488999)
chr6 (9-50)||(4594336-4594377)
[»] chr8 (1 HSPs)
chr8 (103-265)||(20862659-20862821)
[»] scaffold0288 (1 HSPs)
scaffold0288 (104-231)||(2310-2437)
[»] scaffold0475 (1 HSPs)
scaffold0475 (104-184)||(2013-2093)
[»] scaffold0477 (1 HSPs)
scaffold0477 (144-238)||(3418-3512)
[»] chr7 (1 HSPs)
chr7 (13-61)||(3088060-3088108)


Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 4507286 - 4507020
Alignment:
Q  1 tgagactctaccagatggtttaactccaatggatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaataaattcatttac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  4507286 tgagactctaccagatggtttaactccaatggatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaagaaatttatttac 4507187  T
Q  101 ccttttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttacca 200  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  4507186 ccttttcgcgaacttctagctagacttgatgactctgcgaaatctggtcttgtgcctcctgttacttgcttagtttctgattgtctcttgtcatttacca 4507087  T
Q  201 taaaagttgccgaagaacttgcacttccaattgttctccttgtcccatttagtgcttgttctttcat 267  Q
    ||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4507086 taagagttgctgaagaatttgcacttccaattgttctccttgtcccatttagtgcttgttctttcat 4507020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 4513732 - 4513999
Alignment:
Q  1 tgagactctaccagatggtttaactccaatggatggtgatggtg---atgttaatccagacttgaaatctattcgtgaatcgattagaaataaattcatt 97  Q
    ||||||| | || ||||||||||||||||||||||| |||||||   ||| || || |||||||| |||| |||| ||||| || ||||| || | |||     
T  4513732 tgagactattcctgatggtttaactccaatggatggcgatggtggtgatgctactcaagacttgatatctcttcgcgaatcaatcagaaagaattgcatc 4513831  T
Q  98 tacccttttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcattta 197  Q
     | ||||||||||||||| |||||| |||| |||| ||||||||| | |||||| | |||  ||||||||||||||||||||||||| |  || ||||||    
T  4513832 gaaccttttcgcgaacttttagctaaacttaatgactctgcaaaagccggtcttataccttttgttacttgcttagtttctgattgtattatgccattta 4513931  T
Q  198 ccataaaagttgccgaagaacttgcacttccaattgttctccttgtcccatttagtgcttgttctttc 265  Q
    | | | ||||||| |||||||||||||| ||||| ||  || || |||| |  |||||||||||||||    
T  4513932 ctacacaagttgctgaagaacttgcactcccaatagtgatctttttcccgtcaagtgcttgttctttc 4513999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 4483576 - 4483653
Alignment:
Q  32 gatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaataaattcatttacccttttcgc 109  Q
    ||||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||||||||||| ||||||||    
T  4483576 gatggtgatggtgatattaatccagacttgcaatctcgtcgtgaatcgattagaaataaattcatttacacttttcgc 4483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 4558500 - 4558320
Alignment:
Q  1 tgagactctaccagatggtttaactccaatggatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaataaattcatttac 100  Q
    ||||||| | || |||||||||||||||| |||||||||||| ||||||| || |||| |  |  || || || |||| || ||||| || ||| |  |     
T  4558500 tgagactattccggatggtttaactccaacggatggtgatggcgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaa 4558401  T
Q  101 ccttttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgat 181  Q
    ||||| ||||||||||| ||||||||  |||| ||||||| |||||||||||| ||||| ||||||||| |||||||||||    
T  4558400 cctttccgcgaacttcttgctagactaaatgactctgcaacatctggtcttgtccctccagttacttgcatagtttctgat 4558320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 4587007 - 4586827
Alignment:
Q  1 tgagactctaccagatggtttaactccaatggatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaataaattcatttac 100  Q
    ||||||| | ||||||||||||||||||| |||||||||||||||||||| || |||| |  |  || || || |||| || ||||| || ||| |  |     
T  4587007 tgagactattccagatggtttaactccaacggatggtgatggtgatgttagtcaagacatttacgctctttgtaaatcaatcagaaagaacttcctacaa 4586908  T
Q  101 ccttttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgat 181  Q
    ||||| ||||||||||| ||||||||| |||| ||||||| |||||||||| | ||||| || |||||  |||||||||||    
T  4586907 cctttccgcgaacttcttgctagacttaatgactctgcaacatctggtcttatccctccagtcacttgtatagtttctgat 4586827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 265
Target Start/End: Original strand, 4483654 - 4483768
Alignment:
Q  141 aatctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttaccataaaagttgccgaagaacttgcacttccaattgttctcct 240  Q
    ||||||||||||| |||||||||||||||||||||||           |||||||||||||| ||||||  |||||||||||||||||||  ||||||||    
T  4483654 aatctggtcttgtgcctcctgttacttgcttagtttca----------tgtcatttaccatacaagttgttgaagaacttgcacttccaacggttctcct 4483743  T
Q  241 tgtcccatttagtgcttgttctttc 265  Q
    ||||| ||||||||  |||||||||    
T  4483744 tgtcctatttagtgtatgttctttc 4483768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 4496181 - 4496104
Alignment:
Q  32 gatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaataaattcatttacccttttcgc 109  Q
    ||||||||||||||| |||||||||||||| |||||  |||||||||||||||||||  ||| |||||||||||||||    
T  4496181 gatggtgatggtgatattaatccagacttgcaatctcgtcgtgaatcgattagaaatttatttatttacccttttcgc 4496104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 4627382 - 4627288
Alignment:
Q  144 ctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttaccataaaagttgccgaagaacttgcacttccaattgttctc 238  Q
    ||||||||||| | || ||||||||||||||||| |||||| || |||||||||||||| ||| ||| ||||||| |||||| ||||||| ||||    
T  4627382 ctggtcttgttgcaccagttacttgcttagtttcagattgtttaatgtcatttaccatacaagctgctgaagaacatgcactcccaattgctctc 4627288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 238
Target Start/End: Complemental strand, 4599537 - 4599302
Alignment:
Q  2 gagactctaccagatggtttaactccaatggatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaataaattcatttacc 101  Q
    |||||| | |||||||||||||||||||| |||||||||||||||||||  |  ||| | || ||| |  || |||| || |||||||| ||| |  | |    
T  4599537 gagactattccagatggtttaactccaatagatggtgatggtgatgttacacaggacataaattctctctgtaaatcaatcagaaataacttcctccaac 4599438  T
Q  102 cttttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttaccat 201  Q
    | |||||||||||||| ||||||||  |||| ||| | |   |||||||| | ||||| ||||||||||||| || ||||||     |||| ||||| ||    
T  4599437 catttcgcgaacttcttgctagactctatgagtcttctactgctggtcttatccctccagttacttgcttag-ttatgattggaacatgtcctttactat 4599339  T
Q  202 aaaagttgccgaagaacttgcacttccaattgttctc 238  Q
    | ||||||| ||||||||| ||||||| |||||||||    
T  4599338 acaagttgctgaagaactttcacttcctattgttctc 4599302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 4298394 - 4298488
Alignment:
Q  144 ctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttaccataaaagttgccgaagaacttgcacttccaattgttctc 238  Q
    |||||||||| || || ||||||||||||||| |||||| | || |||||||||||||| ||| ||| ||||||| |||||| |||||| |||||    
T  4298394 ctggtcttgtaccaccagttacttgcttagttgctgattttttaatgtcatttaccatacaagctgcggaagaacatgcactcccaattattctc 4298488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 4255552 - 4255632
Alignment:
Q  161 gttacttgcttagtttctgattgtctattgtcatttaccataaaagttgccgaagaacttgcacttccaattgttctcctt 241  Q
    ||||||||||||||||||||||||    |||||||||||||| ||| ||| ||||| | |||||| |||||||||||||||    
T  4255552 gttacttgcttagtttctgattgttacatgtcatttaccatacaagctgctgaagagcatgcactcccaattgttctcctt 4255632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 4572241 - 4572161
Alignment:
Q  101 ccttttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgat 181  Q
    ||||| ||||||||||| ||||||||| |||| ||||||| |||||||||||| | ||| |||| |||| |||||||||||    
T  4572241 cctttccgcgaacttcttgctagacttaatgactctgcaacatctggtcttgtccgtccagttagttgcatagtttctgat 4572161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 4581389 - 4581209
Alignment:
Q  1 tgagactctaccagatggtttaactccaatggatggtgatggtgatgttaatccagacttgaaatctattcgtgaatcgattagaaataaattcatttac 100  Q
    ||||||| | ||||||||||||||||| || || || ||| |||||||||||| |||| |  |  || |  ||||||| || ||||| || ||| |  |     
T  4581389 tgagactattccagatggtttaactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcctacaa 4581290  T
Q  101 ccttttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgat 181  Q
    |||||| | |||||||| ||||||||| |||| ||||| |  ||||||||||| ||||| ||||||||| |||||||||||    
T  4581289 cctttttgtgaacttcttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat 4581209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3173378 - 3173319
Alignment:
Q  1 tgagactctaccagatggtttaactccaatggatggtgatggtgatgttaatccagactt 60  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||||||| || ||||||    
T  3173378 tgagactataccagatggtttaacttcaatggaaggtgatggtgatgttagtcaagactt 3173319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4562037 - 4561992
Alignment:
Q  1 tgagactctaccagatggtttaactccaatggatggtgatggtgat 46  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  4562037 tgagactataccagatggtttaactccaaaggatggtgatggtgat 4561992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 4259072 - 4259163
Alignment:
Q  144 ctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttaccataaaagttgccgaagaacttgcacttccaattgtt 235  Q
    ||||| ||||||| |||||||||||||||||||||||||||    |||||||||  ||| ||| ||| ||||| | |||||| |||||||||    
T  4259072 ctggtattgttccacctgttacttgcttagtttctgattgttacatgtcatttagtatacaagctgctgaagagcatgcactcccaattgtt 4259163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4575830 - 4575783
Alignment:
Q  1 tgagactctaccagatggtttaactccaatggatggtgatggtgatgt 48  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  4575830 tgagactataccagatggtttaactccaaaggatggtaatggtgatgt 4575783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 4623539 - 4623448
Alignment:
Q  144 ctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttaccataaaagttgccgaagaacttgcacttccaattgtt 235  Q
    ||||||||||||| || ||||||||||||||||| ||||||    |||||||||| ||| ||| ||| ||||| | |||||| |||||||||    
T  4623539 ctggtcttgttccaccagttacttgcttagtttccgattgttacatgtcatttacaatacaagctgctgaagagcatgcactcccaattgtt 4623448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 4503054 - 4503105
Alignment:
Q  9 taccagatggtttaactccaatggatggtgatggtgatgttaatccagactt 60  Q
    |||||||||||||||||||  |||| |||||||||||||||| || ||||||    
T  4503054 taccagatggtttaactccggtggaaggtgatggtgatgttagtcaagactt 4503105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 4618666 - 4618627
Alignment:
Q  11 ccagatggtttaactccaatggatggtgatggtgatgtta 50  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  4618666 ccagatggtttaacaccaatggaaggtgatggtgatgtta 4618627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 4623672 - 4623625
Alignment:
Q  11 ccagatggtttaactccaatggatggtgatggtgatgttaatccagac 58  Q
    |||||||||||||| |||||||| |||||||||||||||| || ||||    
T  4623672 ccagatggtttaacaccaatggaaggtgatggtgatgttagtcaagac 4623625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4488950 - 4488999
Alignment:
Q  1 tgagactctaccagatggtttaactccaatggatggtgatggtgatgtta 50  Q
    ||||||| | |||||||||||||||||||  ||||||||||| |||||||    
T  4488950 tgagactattccagatggtttaactccaacagatggtgatggcgatgtta 4488999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 4594377 - 4594336
Alignment:
Q  9 taccagatggtttaactccaatggatggtgatggtgatgtta 50  Q
    ||||||||||| |||| |||||||| ||||||||||||||||    
T  4594377 taccagatggtctaacaccaatggaaggtgatggtgatgtta 4594336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 103 - 265
Target Start/End: Original strand, 20862659 - 20862821
Alignment:
Q  103 ttttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttaccata 202  Q
    |||||| |||||||| || | |||| |||| ||| | |||||||||||| | ||||||||||||||||||||||||||| || |  ||||| ||||||||    
T  20862659 ttttcgtgaacttcttgccaaacttcatgactcttccaaatctggtcttatacctcctgttacttgcttagtttctgatagtttcatgtcagttaccata 20862758  T
Q  203 aaagttgccgaagaacttgcacttccaattgttctccttgtcccatttagtgcttgttctttc 265  Q
     ||||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||||||    
T  20862759 caagttgctgaagaacttgcactcccaattgttctccttatcccatctagtgcttgttctttc 20862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 231
Target Start/End: Original strand, 2310 - 2437
Alignment:
Q  104 tttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttaccataa 203  Q
    |||||||||||||| ||||||||||| || ||||| || ||||||||| | ||||| || ||| |||||||||||||||||    ||||||||||||||     
T  2310 tttcgcgaacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcatttaccatac 2409  T
Q  204 aagttgccgaagaacttgcacttccaat 231  Q
    ||| ||| ||||||  |||||| |||||    
T  2410 aagctgctgaagaatatgcactcccaat 2437  T

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Target: scaffold0475 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 2093 - 2013
Alignment:
Q  104 tttcgcgaacttctagctagacttgatgaatctgcaaaatctggtcttgttcctcctgttacttgcttagtttctgattgt 184  Q
    |||||||||||||| ||||||||||| || ||||| || ||||||||| | ||||| || ||| |||||||||||||||||    
T  2093 tttcgcgaacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgt 2013  T

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Target: scaffold0477 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 3418 - 3512
Alignment:
Q  144 ctggtcttgttcctcctgttacttgcttagtttctgattgtctattgtcatttaccataaaagttgccgaagaacttgcacttccaattgttctc 238  Q
    ||||||||||||| |  ||||||||| ||||  ||||||||    || ||||||||||| ||| ||| ||||||| |||||| ||||||||||||    
T  3418 ctggtcttgttccacaagttacttgcatagtcgctgattgttacatgccatttaccatacaagctgctgaagaacatgcactcccaattgttctc 3512  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 3088108 - 3088060
Alignment:
Q  13 agatggtttaactccaatggatggtgatggtgatgttaatccagacttg 61  Q
    ||||||| ||||||||||||| ||| |||||||||||| || |||||||    
T  3088108 agatggtctaactccaatggaaggtaatggtgatgttagtcaagacttg 3088060  T

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