View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20316_low_6 (Length: 509)

Name: NF20316_low_6
Description: NF20316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20316_low_6
NF20316_low_6
[»] chr3 (39 HSPs)
chr3 (187-475)||(37516567-37516854)
chr3 (188-475)||(26370931-26371218)
chr3 (187-475)||(25391733-25392009)
chr3 (259-471)||(7500875-7501096)
chr3 (186-477)||(28311211-28311511)
chr3 (259-475)||(53651835-53652038)
chr3 (259-475)||(44047520-44047724)
chr3 (188-473)||(14461007-14461297)
chr3 (300-475)||(41218393-41218568)
chr3 (187-475)||(26278289-26278563)
chr3 (186-475)||(12909763-12910060)
chr3 (371-476)||(44625633-44625738)
chr3 (185-476)||(53987799-53988067)
chr3 (187-275)||(41218243-41218331)
chr3 (371-470)||(43700235-43700333)
chr3 (190-272)||(33178983-33179065)
chr3 (302-472)||(35077151-35077321)
chr3 (190-275)||(7501101-7501186)
chr3 (295-472)||(33179141-33179306)
chr3 (259-327)||(43700174-43700242)
chr3 (187-275)||(43700081-43700169)
chr3 (302-476)||(9600286-9600447)
chr3 (300-361)||(38239491-38239552)
chr3 (187-248)||(44047756-44047816)
chr3 (295-356)||(53068285-53068346)
chr3 (190-245)||(53652073-53652128)
chr3 (300-469)||(41358636-41358805)
chr3 (186-238)||(6929866-6929918)
chr3 (221-281)||(41358541-41358601)
chr3 (187-238)||(6891511-6891562)
chr3 (187-238)||(19269162-19269213)
chr3 (187-238)||(48757334-48757385)
chr3 (198-237)||(53710664-53710703)
chr3 (187-237)||(31989295-31989345)
chr3 (186-246)||(35077641-35077701)
chr3 (370-429)||(53068224-53068283)
chr3 (391-475)||(41199991-41200075)
chr3 (295-335)||(43447620-43447660)
chr3 (324-356)||(44625741-44625773)
[»] chr5 (60 HSPs)
chr5 (187-475)||(33006824-33007113)
chr5 (187-471)||(34846289-34846573)
chr5 (187-475)||(35468821-35469130)
chr5 (186-475)||(15675232-15675541)
chr5 (259-475)||(30248895-30249099)
chr5 (185-438)||(7161970-7162232)
chr5 (187-475)||(16567721-16568018)
chr5 (203-472)||(32953572-32953850)
chr5 (259-475)||(34443896-34444100)
chr5 (185-476)||(1672373-1672672)
chr5 (187-475)||(43228531-43228827)
chr5 (295-438)||(16667499-16667642)
chr5 (295-475)||(21068927-21069107)
chr5 (295-439)||(17192675-17192819)
chr5 (365-474)||(2476335-2476444)
chr5 (186-275)||(13942640-13942729)
chr5 (187-327)||(14832699-14832860)
chr5 (203-475)||(37779595-37779854)
chr5 (187-275)||(2476504-2476592)
chr5 (300-428)||(12267420-12267548)
chr5 (295-475)||(15503847-15504014)
chr5 (195-293)||(21069142-21069240)
chr5 (184-280)||(37552048-37552144)
chr5 (184-280)||(37654878-37654974)
chr5 (187-282)||(12267271-12267366)
chr5 (187-275)||(15504088-15504176)
chr5 (187-275)||(34444105-34444194)
chr5 (300-475)||(13942790-13942968)
chr5 (372-475)||(14832854-14832955)
chr5 (200-273)||(36234456-36234529)
chr5 (203-475)||(37607386-37607647)
chr5 (315-431)||(37654762-37654878)
chr5 (189-282)||(6900899-6900992)
chr5 (337-438)||(9738339-9738440)
chr5 (186-297)||(8214526-8214638)
chr5 (391-475)||(13694766-13694849)
chr5 (315-431)||(37551932-37552048)
chr5 (264-327)||(2476431-2476494)
chr5 (295-386)||(767293-767380)
chr5 (195-256)||(30249123-30249184)
chr5 (365-477)||(36234646-36234757)
chr5 (360-474)||(13694982-13695095)
chr5 (187-237)||(25034985-25035035)
chr5 (371-436)||(6900742-6900807)
chr5 (222-282)||(767430-767490)
chr5 (186-234)||(2985872-2985920)
chr5 (187-238)||(4306673-4306724)
chr5 (187-238)||(15497447-15497498)
chr5 (365-475)||(42989463-42989574)
chr5 (394-475)||(39605931-39606011)
chr5 (321-358)||(42989569-42989606)
chr5 (241-297)||(39605784-39605840)
chr5 (195-238)||(14317151-14317194)
chr5 (188-239)||(42989673-42989724)
chr5 (259-297)||(15504045-15504083)
chr5 (187-225)||(31649080-31649118)
chr5 (252-297)||(6900863-6900908)
chr5 (300-356)||(7159612-7159668)
chr5 (181-225)||(12448236-12448280)
chr5 (187-227)||(38397550-38397590)
[»] chr1 (43 HSPs)
chr1 (186-476)||(31844528-31844818)
chr1 (187-475)||(8239210-8239499)
chr1 (186-475)||(6331606-6331893)
chr1 (187-476)||(14727247-14727557)
chr1 (16-188)||(47626244-47626416)
chr1 (187-476)||(27460625-27460905)
chr1 (185-475)||(27583903-27584198)
chr1 (188-472)||(33468860-33469121)
chr1 (185-475)||(25007394-25007693)
chr1 (190-475)||(37153881-37154175)
chr1 (187-475)||(44305342-44305639)
chr1 (259-436)||(25011518-25011682)
chr1 (187-290)||(9527181-9527284)
chr1 (195-297)||(34459238-34459340)
chr1 (300-431)||(48940438-48940569)
chr1 (295-474)||(44238875-44239042)
chr1 (195-297)||(49898505-49898607)
chr1 (195-327)||(1428315-1428468)
chr1 (190-282)||(4641928-4642020)
chr1 (300-438)||(24745370-24745505)
chr1 (195-475)||(24645984-24646267)
chr1 (187-282)||(4774104-4774199)
chr1 (187-293)||(6801972-6802078)
chr1 (370-475)||(4773937-4774042)
chr1 (371-475)||(49898345-49898449)
chr1 (190-281)||(24745540-24745629)
chr1 (295-439)||(9527011-9527143)
chr1 (371-430)||(1428461-1428520)
chr1 (392-478)||(4163369-4163455)
chr1 (188-250)||(25011426-25011488)
chr1 (365-436)||(4642145-4642216)
chr1 (365-475)||(6802175-6802284)
chr1 (252-297)||(4642011-4642056)
chr1 (476-509)||(47626220-47626253)
chr1 (400-440)||(34459086-34459126)
chr1 (301-337)||(34459165-34459201)
chr1 (195-226)||(11647352-11647383)
chr1 (203-238)||(17875579-17875614)
chr1 (187-226)||(42817784-42817823)
chr1 (188-238)||(41753219-41753269)
chr1 (189-238)||(3830102-3830151)
chr1 (365-434)||(16640361-16640430)
chr1 (186-238)||(21973677-21973729)
[»] chr7 (39 HSPs)
chr7 (187-475)||(26722847-26723134)
chr7 (187-475)||(35300316-35300625)
chr7 (192-475)||(41759520-41759804)
chr7 (187-472)||(22206574-22206868)
chr7 (187-472)||(22227871-22228165)
chr7 (203-475)||(5991324-5991602)
chr7 (186-427)||(7873107-7873357)
chr7 (259-379)||(23704450-23704570)
chr7 (190-476)||(25688102-25688376)
chr7 (187-297)||(3012439-3012549)
chr7 (295-423)||(3012280-3012408)
chr7 (187-290)||(814861-814964)
chr7 (195-282)||(28693899-28693986)
chr7 (295-475)||(28694057-28694236)
chr7 (198-356)||(38991076-38991238)
chr7 (300-475)||(21932801-21932963)
chr7 (188-282)||(4843452-4843546)
chr7 (188-275)||(21932631-21932718)
chr7 (203-290)||(42439466-42439553)
chr7 (300-471)||(19377319-19377488)
chr7 (195-297)||(38128877-38128979)
chr7 (188-272)||(19377554-19377638)
chr7 (195-475)||(30852275-30852529)
chr7 (295-367)||(38129010-38129082)
chr7 (187-293)||(41862234-41862340)
chr7 (300-356)||(21688152-21688208)
chr7 (295-386)||(4843311-4843402)
chr7 (186-238)||(19400247-19400299)
chr7 (295-354)||(42439591-42439650)
chr7 (321-419)||(5850707-5850805)
chr7 (187-237)||(27387165-27387215)
chr7 (188-275)||(21688288-21688375)
chr7 (187-234)||(38575127-38575174)
chr7 (295-438)||(815002-815133)
chr7 (186-238)||(38826022-38826074)
chr7 (186-225)||(20965955-20965994)
chr7 (187-238)||(22937701-22937752)
chr7 (187-238)||(45197906-45197957)
chr7 (199-248)||(23704369-23704418)
[»] chr8 (30 HSPs)
chr8 (186-472)||(24964966-24965240)
chr8 (188-475)||(36406378-36406686)
chr8 (259-471)||(3384000-3384211)
chr8 (259-475)||(28927990-28928194)
chr8 (190-475)||(27321753-27322034)
chr8 (295-432)||(13243055-13243192)
chr8 (295-475)||(39431679-39431859)
chr8 (187-475)||(38214689-38214953)
chr8 (301-474)||(34282920-34283081)
chr8 (190-275)||(35384256-35384341)
chr8 (198-275)||(34282759-34282836)
chr8 (187-272)||(28928202-28928287)
chr8 (301-431)||(31500854-31500981)
chr8 (187-268)||(3383907-3383988)
chr8 (200-272)||(13243273-13243345)
chr8 (331-475)||(8968260-8968404)
chr8 (222-291)||(31500736-31500805)
chr8 (391-475)||(21138159-21138243)
chr8 (187-238)||(17839594-17839645)
chr8 (187-238)||(21958779-21958830)
chr8 (187-237)||(30791349-30791399)
chr8 (186-238)||(5637566-5637618)
chr8 (186-225)||(16594824-16594863)
chr8 (187-238)||(27046968-27047019)
chr8 (187-238)||(36409652-36409703)
chr8 (16-46)||(546000-546030)
chr8 (196-238)||(10014318-10014360)
chr8 (187-225)||(24592196-24592234)
chr8 (186-226)||(8968569-8968609)
chr8 (186-218)||(39532520-39532552)
[»] chr4 (54 HSPs)
chr4 (188-420)||(10058511-10058743)
chr4 (187-475)||(4728477-4728786)
chr4 (190-475)||(31364067-31364339)
chr4 (186-444)||(46645553-46645832)
chr4 (259-475)||(2576091-2576307)
chr4 (188-476)||(10715584-10715883)
chr4 (188-476)||(10929354-10929653)
chr4 (187-475)||(4552116-4552413)
chr4 (187-475)||(2017325-2017622)
chr4 (195-475)||(40969155-40969444)
chr4 (186-472)||(14044279-14044553)
chr4 (187-475)||(9003488-9003783)
chr4 (187-475)||(50383819-50384101)
chr4 (295-475)||(25237495-25237675)
chr4 (365-476)||(32005845-32005955)
chr4 (371-474)||(1585642-1585744)
chr4 (187-282)||(52373887-52373982)
chr4 (187-438)||(11826936-11827174)
chr4 (195-431)||(41972338-41972578)
chr4 (195-282)||(2521794-2521881)
chr4 (188-475)||(9694019-9694291)
chr4 (187-295)||(25237708-25237816)
chr4 (187-275)||(32006023-32006111)
chr4 (295-472)||(31929048-31929224)
chr4 (190-275)||(43003075-43003160)
chr4 (295-386)||(2521948-2522038)
chr4 (371-477)||(32828144-32828250)
chr4 (362-475)||(15034545-15034658)
chr4 (217-282)||(50100003-50100068)
chr4 (190-280)||(32828278-32828368)
chr4 (300-356)||(8901841-8901897)
chr4 (187-258)||(2576329-2576400)
chr4 (295-368)||(36947544-36947617)
chr4 (295-356)||(49745077-49745138)
chr4 (187-238)||(25182734-25182785)
chr4 (208-272)||(49745199-49745263)
chr4 (189-235)||(42843980-42844026)
chr4 (395-476)||(8901734-8901814)
chr4 (391-475)||(6017047-6017131)
chr4 (186-238)||(12211084-12211136)
chr4 (391-475)||(52373670-52373753)
chr4 (220-275)||(1585809-1585864)
chr4 (187-238)||(5516933-5516984)
chr4 (187-234)||(26438240-26438287)
chr4 (187-238)||(37236117-37236168)
chr4 (187-238)||(49908216-49908267)
chr4 (180-238)||(17555461-17555519)
chr4 (187-225)||(24974532-24974570)
chr4 (188-238)||(48131134-48131184)
chr4 (188-237)||(10351871-10351920)
chr4 (185-238)||(12679709-12679762)
chr4 (365-426)||(50099820-50099881)
chr4 (186-238)||(43142562-43142614)
chr4 (188-236)||(55464518-55464566)
[»] chr6 (28 HSPs)
chr6 (189-475)||(1780933-1781207)
chr6 (195-475)||(9695975-9696275)
chr6 (188-475)||(10397698-10397977)
chr6 (259-475)||(9046896-9047111)
chr6 (185-472)||(34248899-34249195)
chr6 (196-475)||(23663656-23663944)
chr6 (259-426)||(15528914-15529081)
chr6 (195-387)||(2941229-2941442)
chr6 (187-426)||(15122011-15122271)
chr6 (195-282)||(31188208-31188295)
chr6 (295-428)||(2836217-2836350)
chr6 (185-281)||(339472-339568)
chr6 (191-275)||(2836059-2836143)
chr6 (195-282)||(31200052-31200140)
chr6 (188-282)||(2960805-2960899)
chr6 (341-475)||(34188721-34188855)
chr6 (295-472)||(339271-339434)
chr6 (203-272)||(28614308-28614377)
chr6 (203-356)||(14938826-14938988)
chr6 (190-282)||(34188931-34189023)
chr6 (341-475)||(28614434-28614568)
chr6 (189-248)||(15529113-15529172)
chr6 (187-238)||(21148896-21148947)
chr6 (370-438)||(2960652-2960720)
chr6 (195-250)||(9046811-9046866)
chr6 (391-472)||(14939011-14939092)
chr6 (391-475)||(5582407-5582490)
chr6 (185-225)||(25558456-25558496)
[»] chr2 (50 HSPs)
chr2 (187-476)||(22572609-22572885)
chr2 (187-475)||(13203698-13203995)
chr2 (195-475)||(41114765-41115054)
chr2 (187-475)||(2475753-2476034)
chr2 (259-448)||(6799866-6800043)
chr2 (187-431)||(29257341-29257594)
chr2 (259-431)||(18299123-18299283)
chr2 (295-438)||(25562891-25563034)
chr2 (187-289)||(17249456-17249558)
chr2 (187-275)||(303979-304067)
chr2 (187-275)||(17148936-17149024)
chr2 (195-275)||(41010652-41010732)
chr2 (187-275)||(6799773-6799861)
chr2 (295-475)||(34756610-34756790)
chr2 (365-475)||(33909416-33909525)
chr2 (187-272)||(12000700-12000785)
chr2 (190-294)||(16220919-16221023)
chr2 (187-290)||(45444340-45444444)
chr2 (217-275)||(18299060-18299118)
chr2 (370-475)||(304202-304307)
chr2 (187-272)||(15651384-15651468)
chr2 (300-363)||(17249349-17249412)
chr2 (295-367)||(17148808-17148879)
chr2 (203-275)||(33909250-33909322)
chr2 (304-354)||(12000563-12000613)
chr2 (295-356)||(41010513-41010574)
chr2 (195-275)||(25563112-25563192)
chr2 (300-354)||(15651247-15651301)
chr2 (188-238)||(42755571-42755621)
chr2 (295-352)||(304141-304198)
chr2 (186-238)||(26161697-26161749)
chr2 (187-226)||(1542853-1542892)
chr2 (259-297)||(304072-304110)
chr2 (259-297)||(12000653-12000691)
chr2 (300-358)||(33909363-33909421)
chr2 (391-436)||(17148751-17148796)
chr2 (189-234)||(26655688-26655733)
chr2 (391-475)||(4570580-4570663)
chr2 (300-356)||(15429216-15429272)
chr2 (241-297)||(34756841-34756897)
chr2 (200-238)||(8058317-8058355)
chr2 (188-238)||(18425814-18425864)
chr2 (16-46)||(23346908-23346938)
chr2 (187-225)||(31162097-31162135)
chr2 (187-229)||(43780078-43780120)
chr2 (186-238)||(1955096-1955148)
chr2 (370-426)||(12000502-12000558)
chr2 (252-292)||(15651342-15651382)
chr2 (190-234)||(17090226-17090270)
chr2 (190-226)||(34756941-34756977)
[»] scaffold0638 (1 HSPs)
scaffold0638 (187-472)||(4032-4305)
[»] scaffold0075 (3 HSPs)
scaffold0075 (187-475)||(11456-11751)
scaffold0075 (259-473)||(6843-7045)
scaffold0075 (195-265)||(7060-7129)
[»] scaffold0618 (1 HSPs)
scaffold0618 (187-431)||(1670-1923)
[»] scaffold0021 (4 HSPs)
scaffold0021 (295-436)||(109316-109457)
scaffold0021 (203-297)||(112108-112203)
scaffold0021 (203-275)||(109207-109280)
scaffold0021 (341-386)||(112277-112322)
[»] scaffold0108 (1 HSPs)
scaffold0108 (385-476)||(21093-21184)
[»] scaffold0015 (1 HSPs)
scaffold0015 (187-238)||(214018-214069)
[»] scaffold0178 (2 HSPs)
scaffold0178 (188-238)||(21945-21995)
scaffold0178 (188-238)||(27447-27497)
[»] scaffold0168 (1 HSPs)
scaffold0168 (186-238)||(16048-16100)


Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 37516854 - 37516567
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37516854 cagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatc 37516755  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||    
T  37516754 tttcctgcggaacctagatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaattccgcaggtaaatccgcaggaaaagctaaaa 37516655  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    | | ||||||||||||| ||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  37516654 attctagtaatggttggacttgctacaaagaaagttggaaccgagcctgggcactagcccaggctagctg-ggggtggctccgcccctg 37516567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 188 - 475
Target Start/End: Original strand, 26370931 - 26371218
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatct 287  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26370931 agtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatct 26371030  T
Q  288 ttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaa 387  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||| ||||| ||| |||||||     
T  26371031 ttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcaggtaaatccgcagaaaatgctaaaat 26371130  T
Q  388 atttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
     | |||||||||||||  |||||| ||| ||||||||||| ||| || |||||||||||||||||| || ||||||||||| ||||||    
T  26371131 ttctagtaatggttggatttgctaaaaataaagttggagccgagcctaggcactagcccaggctagttggggggtggctccacccctg 26371218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 187 - 475
Target Start/End: Original strand, 25391733 - 25392009
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| | | |||||||||||||||||||||||||||||||    
T  25391733 cagtggcagagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacattacttccttcttacgaataatttcacatttcctacggatatatc 25391832  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||||||||||| |||||||||||||||||| | || |||||   |||| ||| ||||||||||||            |||| |||||||||||||||||    
T  25391833 tttcctgcggaacctaaatccttggcaaaatttgcaagaaatacatttcttgcggaatttacacaa------------aaatccgcaggaaaagctaaaa 25391920  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    | | |||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  25391921 attctagtaatggtagggcttgctacgaagaaagttggagctgagcctgggcattagcccaggctagctggggggtggctccgcccctg 25392009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 259 - 471
Target Start/End: Complemental strand, 7501096 - 7500875
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||| ||||||||||||| || |    
T  7501096 ataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaatttacacaaacatcc 7500997  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgag---------tctgggcactagcccagg 449  Q
     || |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||          |||||||||||||||||    
T  7500996 gcatgtaaatccgcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttggagccgagcctgggctacctgggcactagcccagg 7500897  T
Q  450 ctagctgaggggtggctccgcc 471  Q
    ||||||| ||||||||||||||    
T  7500896 ctagctggggggtggctccgcc 7500875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 186 - 477
Target Start/End: Complemental strand, 28311511 - 28311211
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct---------- 275  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||              
T  28311511 ccagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacattacttccttcctacgaataatttcacatttcctgcagataaat 28311412  T
Q  276 -----------acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggt 364  Q
               |||||||||||||||| |||||| |||||||||||||||||||||||||||||   |||||||| |||||||||||||||| |          
T  28311411 tcacatttcctacggatatatctttccagcggaacctaaatccttggcaaaatctacaggaaatacatttcctgcggaatttacacaaaaatcc------ 28311318  T
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
          ||||||||| ||||||| | |||||||||| ||||||| |||||||||||||||||||||| ||||||||||  |||||||||||| |||||||    
T  28311317 ------gcaggaaaaactaaaaattctagtaatggtagggcttgttacaaagaaagttggagctgagcctgggcactattccaggctagctggggggtgg 28311224  T
Q  465 ctccgcccctgtg 477  Q
    |||||||||||||    
T  28311223 ctccgcccctgtg 28311211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 259 - 475
Target Start/End: Complemental strand, 53652038 - 53651835
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||  |||||||| |||||||||||||||| |    
T  53652038 ataaattcacatttcctacggatatatctttcctgcagaacctaaatccttggcaaaatctgcaggaaatgcatttcctgcggaatttacacaaaaatcc 53651939  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgag 458  Q
                ||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  53651938 ------------gcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttggagctgagcctgggcactagcccaggctagctg-g 53651852  T
Q  459 gggtggctccgcccctg 475  Q
    |||||||||||||||||    
T  53651851 gggtggctccgcccctg 53651835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 259 - 475
Target Start/End: Complemental strand, 44047724 - 44047520
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||   |||||||| |||||||||||||||| |    
T  44047724 ataaattcacatttcctacggatatatctttcttgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatcc 44047625  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgag 458  Q
                ||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |    
T  44047624 ------------gcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttggagctgagcctgggtactagcccaggctagctggg 44047537  T
Q  459 gggtggctccgcccctg 475  Q
    |||||||||||||||||    
T  44047536 gggtggctccgcccctg 44047520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 188 - 473
Target Start/End: Complemental strand, 14461297 - 14461007
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataat---------------------ttc 266  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||                     |||    
T  14461297 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcacaaaacgttacttccttcctacgaataattttacatttcctgcagataaattc 14461198  T
Q  267 acatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaa 366  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||   |||||||| ||||||||| ||            ||    
T  14461197 acatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggacatacatttcctgcggaatttacataa------------aa 14461110  T
Q  367 attcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggct 466  Q
    || ||||||||||| |||||| | |||||||||| |||||||||||||||||| ||||||||||| ||||||   |||||||||| |||| |||| ||||    
T  14461109 atccgcaggaaaagttaaaaattctagtaatggtagggcttgctacaaagaaaattggagctgagcctgggc---agcccaggctcgctg-ggggaggct 14461014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 300 - 475
Target Start/End: Original strand, 41218393 - 41218568
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatgg 399  Q
    |||||| ||||||||||||  ||||||||||||||||||| ||||||| |||||||| | || |||||| |||||||||||||||||  | |||||||||    
T  41218393 ctaaattcttggcaaaatcggcaggaaatgtgtttcctgcggaatttagacaaaaatgcgcaagtaaatccgcaggaaaagctaaaagttctagtaatgg 41218492  T
Q  400 ttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
     |||||||||||||| |||||| ||||||||| ||||||    || ||||||||||| ||||||||||||||||||    
T  41218493 ctgggcttgctacaaggaaagtcggagctgagcctgggctagtgctcaggctagctggggggtggctccgcccctg 41218568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 26278563 - 26278289
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| |||| || ||||||||||||  | ||||||||| ||||||||||| | |||||||| | ||||||||||||||||||||||||| |   |||    
T  26278563 cagtggcggagcaagaaattttatagagtttaggcaaaaaaattatcgcaaaatgatacttccttcttgcgaataatttcacatttcctacgaa---atc 26278467  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |     || | ||    ||||| |||||||||| ||||||||||||||||| | ||||||||| |||||| |  |||||||| |||| ||||||||||||    
T  26278466 t-----gcaggaa----atcctaggcaaaatctgcaggaaatgtgtttcctccggaatttacataaaaatccgtaggtaaatccgcatgaaaagctaaaa 26278376  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    | | ||||||||| | |||||||| |||||||| ||||||||||| ||||||    |||||||||||||  ||||||||||||||||||    
T  26278375 attctagtaatggctaggcttgctccaaagaaaattggagctgagcctgggctagtgcccaggctagct--ggggtggctccgcccctg 26278289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 186 - 475
Target Start/End: Complemental strand, 12910060 - 12909763
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataat---------------------t 264  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||||||                     |    
T  12910060 ccagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaatcgttacttccttcc--cgaataatttcacatttcctgtagataaat 12909963  T
Q  265 tcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtg--------tttcctgcagaatttacacaaaaat 356  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||  |        |||||||| ||||||||||||        
T  12909962 tcacatttcctacggatatatctttcctgcggaacctaaatctttggcaaaatctgcaggaaatcagaaaatacatttcctgcggaatttacacaa---- 12909867  T
Q  357 tcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctg 456  Q
            |||| |||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| |||       ||||||||||||||    
T  12909866 --------aaatccgcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttggagctgagcctg-------gcccaggctagctg 12909782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 371 - 476
Target Start/End: Complemental strand, 44625738 - 44625633
Alignment:
Q  371 gcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgc 470  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  44625738 gcaggaaaagctaaaaattctagtaatagttgggcttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctggggggtggctccgc 44625639  T
Q  471 ccctgt 476  Q
    ||||||    
T  44625638 ccctgt 44625633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 476
Target Start/End: Complemental strand, 53988067 - 53987799
Alignment:
Q  185 tccagtggcagagccaggaattttatagagcctgggcaaaaaa-tttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatat 283  Q
    ||||||||| ||||||| |||||||||||| | |||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||| |||| ||    
T  53988067 tccagtggcggagccagaaattttatagagtccgggcaaaaaaatttattgcaaaatgttacttccttcctgcgaataatttcacatttcctgcgga-at 53987969  T
Q  284 atctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagcta 383  Q
           ||||    |  ||||||| |||||||||| ||||||||||||||||||| ||||||||| ||            |||| ||||||||||||||    
T  53987968 -------ctgc----aggaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataa------------aaatccgcaggaaaagcta 53987892  T
Q  384 aaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctgt 476  Q
    |||  | |||||||||||| |||  ||||||||||| ||| ||||||| |||| |    ||||| ||||||||||||||||||||||||||||    
T  53987891 aaagttctagtaatggttgagctgactacaaagaaaattgaagctgagcctggactagtgcccaagctagctgaggggtggctccgcccctgt 53987799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 41218243 - 41218331
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||| ||| |||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41218243 cagtggcggagtcaggaattttatagagtctaggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 41218331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 43700235 - 43700333
Alignment:
Q  371 gcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgc 470  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||||||| ||| |||||||||||||    
T  43700235 gcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttggagccgagcctgagcactagtccaggctaactg-ggggtggctccgc 43700333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 33178983 - 33179065
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt 272  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  33178983 tggcggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacattt 33179065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 302 - 472
Target Start/End: Complemental strand, 35077321 - 35077151
Alignment:
Q  302 aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggtt 401  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||| |||||||||||  | | | ||||| |    
T  35077321 aaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaattcccaggtaaatccgcagaaaaagctaaaagttctggcaatggct 35077222  T
Q  402 gggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
      |||||||||||||||| ||||| |||||  | |||    ||||| |||||||| | |||||||||||||    
T  35077221 acgcttgctacaaagaaaattggaactgagcttaggctagtgcccaagctagctgggtggtggctccgccc 35077151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 190 - 275
Target Start/End: Complemental strand, 7501186 - 7501101
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||| ||||||||||||||||||||||| |  |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  7501186 tggcggagccaggaattttatagagcctcgataaaaaatttatcgcaaaacgttacttacttcctgcgaataatttcacatttcct 7501101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 472
Target Start/End: Original strand, 33179141 - 33179306
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||            ||||||||||||||||||||||  | ||||    
T  33179141 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaattcgcaggaaaagctaaaagttctagt 33179228  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
    ||||| ||| ||||||||||| ||||||||||||||| ||  ||    ||||||||||| || ||| |||||||||||    
T  33179229 aatggctggacttgctacaaaaaaagttggagctgagcctaagctagtgcccaggctagttgggggatggctccgccc 33179306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 43700174 - 43700242
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaa 327  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  43700174 ataatttcacatttccaacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaa 43700242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 43700081 - 43700169
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||| ||| ||| ||||||||||||| |||| ||||||| ||||||||||||||||||| |  |||||||||||||||||||||||    
T  43700081 cagtggcggagtcagaaattttatagagcttgggtaaaaaatatatcgcaaaacgttacttcttttctgcgaataatttcacatttcct 43700169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 302 - 476
Target Start/End: Complemental strand, 9600447 - 9600286
Alignment:
Q  302 aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggtt 401  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||| |||||| |            ||||||||||| ||||  | ||||||||| |    
T  9600447 aaatcctaagcaaaatctgcaggaaatgtgtttcctgcagaatttacataaaaatcc------------gcaggaaaagccaaaagttctagtaatggct 9600360  T
Q  402 gggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctgt 476  Q
    ||| || ||||||||||| | |||||||||  |||||    |||||||||||||| |||||||||||||||||||    
T  9600359 gggattactacaaagaaaataggagctgagcttgggctagtgcccaggctagctg-ggggtggctccgcccctgt 9600286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 361
Target Start/End: Complemental strand, 38239552 - 38239491
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcaca 361  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||||||| ||||| ||||    
T  38239552 ctaaatccttggcaaaatccgcagaaaatgtgtttcctgcagaatttacactaaaatccaca 38239491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 248
Target Start/End: Complemental strand, 44047816 - 44047756
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttc 248  Q
    ||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  44047816 cagtggcggagccaggaatttt-tagagtctggacaaaaaatttatcgcaaaacgttacttc 44047756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 53068346 - 53068285
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaat 356  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  53068346 ggaacctaaattcttggcaaaatctgcaggaaatgtgtttcctgtggaatttacacaaaaat 53068285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 53652128 - 53652073
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttac 245  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||| ||||    
T  53652128 tggcggagccaggaattttatagagtctggacaaaaaatttatcgcaaaacattac 53652073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 469
Target Start/End: Original strand, 41358636 - 41358805
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaattt-acacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatg 398  Q
    ||||||| |||||||||||  ||||||||||||||   |  |||||| ||||||| || | || |||||| || ||||||||| | ||  | || |||||    
T  41358636 ctaaatcattggcaaaatccgcaggaaatgtgtttttggaggaattttacacaaatatccgcaagtaaatccgtaggaaaagcgagaagttctaataatg 41358735  T
Q  399 gttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccg 469  Q
    |||| | |||||||||||||||| | |||||||||||| |    |||||||||||||| ||||||||||||    
T  41358736 gttgagtttgctacaaagaaagtagaagctgagtctggactagcgcccaggctagctg-ggggtggctccg 41358805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 6929866 - 6929918
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| |||||||||| ||||| |||||||||| ||||||||||||||||    
T  6929866 ccagtggcggagccaggaaatttatggagcctgggcgaaaaatttatcgcaaa 6929918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 41358541 - 41358601
Alignment:
Q  221 caaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat 281  Q
    ||||||| |||||||||||||||| ||||| |||||| |||||| |||||||||| |||||    
T  41358541 caaaaaaattatcgcaaaacgttatttccttcctgcggataattgcacatttcctgcggat 41358601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 6891562 - 6891511
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  6891562 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaa 6891511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 19269162 - 19269213
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  19269162 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaa 19269213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 48757334 - 48757385
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  48757334 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaa 48757385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 53710703 - 53710664
Alignment:
Q  198 ccaggaattttatagagcctgggcaaaaaatttatcgcaa 237  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  53710703 ccaggaatttcatagagcctgggcaaaaaatttatcgcaa 53710664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 31989345 - 31989295
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaa 237  Q
    |||||||  |||||| ||||| |||||||||||||||||||||||||||||    
T  31989345 cagtggcgaagccagaaatttcatagagcctgggcaaaaaatttatcgcaa 31989295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 35077701 - 35077641
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttact 246  Q
    |||||||| |||  || ||||||||||||||||||||||||| | ||||||||| ||||||    
T  35077701 ccagtggcggagttagaaattttatagagcctgggcaaaaaaataatcgcaaaatgttact 35077641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 429
Target Start/End: Complemental strand, 53068283 - 53068224
Alignment:
Q  370 cgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctg 429  Q
    ||||||||||| |||||  | ||||||||| ||| |||| ||||||||||||||||||||    
T  53068283 cgcaggaaaagttaaaacttctagtaatggctggacttgttacaaagaaagttggagctg 53068224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 475
Target Start/End: Original strand, 41199991 - 41200075
Alignment:
Q  391 tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||| | ||||||| ||||||| ||||| | ||||||| ||||||    || ||||||| ||| ||||||||||||||||||    
T  41199991 tagtaattgctgggcttactacaaaaaaagtagaagctgagcctgggctagtgctcaggctaactggggggtggctccgcccctg 41200075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 43447660 - 43447620
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttc 335  Q
    |||| |||||||||||||||||||| ||||||| |||||||    
T  43447660 ggaagctaaatccttggcaaaatctgcaggaaacgtgtttc 43447620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 324 - 356
Target Start/End: Complemental strand, 44625773 - 44625741
Alignment:
Q  324 gaaatgtgtttcctgcagaatttacacaaaaat 356  Q
    |||||||||||||| ||||||||||||||||||    
T  44625773 gaaatgtgtttcctccagaatttacacaaaaat 44625741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 218; Significance: 1e-119; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 33007113 - 33006824
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33007113 cagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatc 33007014  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||| | ||||||||| |||||||||||||||||    
T  33007013 tttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctacggaatttacacaaaaatccgcaggtaaatccgcaggaaaagctaaaa 33006914  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagct-gaggggtggctccgcccctg 475  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||||||||||||| | ||||||||||| ||||||    
T  33006913 aatttagtaatggttgggtttgctacaaagaaagttggagccgagcctgggcattagcccaggctagctgggggggtggctcctcccctg 33006824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 187 - 471
Target Start/End: Complemental strand, 34846573 - 34846289
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34846573 cagtggcggagccaggaattttatagagcctggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatc 34846474  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||| ||||||| ||||||||||||||||||||  ||||||||||||| |||| |||||||||||||||| |  |||||||| ||||||| |||||||||    
T  34846473 tttcatgcggaacctaaatccttggcaaaatctgtaggaaatgtgtttactgcggaatttacacaaaaatccggaggtaaatccgcaggataagctaaaa 34846374  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcc 471  Q
    | | ||||||||||| | ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  34846373 attctagtaatggtttgacttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctggggggtggctccgcc 34846289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 35469130 - 35468821
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct----------- 275  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||               
T  35469130 cagtggctgagccaggaattttatagagcctgggcaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcagataattt 35469031  T
Q  276 ----------acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
              ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | |||  |    
T  35469030 cacattttctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcagaaa 35468931  T
Q  366 aattcgcaggaaaagctaaaaaatt-tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
    ||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  35468930 aatccgcagaaaaagctaaaaaattctagcaatggttgggcttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctg-ggggtgg 35468832  T
Q  465 ctccgcccctg 475  Q
    |||||||||||    
T  35468831 ctccgcccctg 35468821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 186 - 475
Target Start/End: Complemental strand, 15675541 - 15675232
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttccta--------- 276  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||              
T  15675541 ccagtggcggagctaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtagataatt 15675442  T
Q  277 ------------cggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggt 364  Q
                ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | | |||||    
T  15675441 tcacatttccttcggatatatctttcctgcggaacttaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaactccgcaggt 15675342  T
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
    |||| ||||| ||||| |||||| | |||||||||||||| |||| |||||||||||| |||| ||| |||||||||||||||||||||||| |||||||    
T  15675341 aaatccgcagaaaaagttaaaaattctagtaatggttgggtttgcaacaaagaaagttagagccgagcctgggcactagcccaggctagctg-ggggtgg 15675243  T
Q  465 ctccgcccctg 475  Q
    |||||||||||    
T  15675242 ctccgcccctg 15675232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 259 - 475
Target Start/End: Complemental strand, 30249099 - 30248895
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||          
T  30249099 ataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------ 30249006  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgag 458  Q
          |||| ||||| |||||||||||| | ||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |    
T  30249005 ------aaatccgcagaaaaagctaaaaattctagtaatagttgggcttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctggg 30248912  T
Q  459 gggtggctccgcccctg 475  Q
    |||||||||||||||||    
T  30248911 gggtggctccgcccctg 30248895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 185 - 438
Target Start/End: Original strand, 7161970 - 7162232
Alignment:
Q  185 tccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-t 283  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||  ||||| |    
T  7161970 tccagtggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcaaataatttcacatttcctgtggataat 7162069  T
Q  284 atc---tttcctgcggaaact-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcagg 375  Q
     ||   |||||||||||| ||     ||||||| |||||||||| ||||||||||||||||||  ||||||||| |||||| | ||||||||| ||||||    
T  7162070 ttcacatttcctgcggaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgtggaatttacataaaaatcctcaggtaaatccgcagg 7162169  T
Q  376 aaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggc 438  Q
    |||||||||||  ||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  7162170 aaaagctaaaatttttagtaatggctgggcttgctacaaagaaaattggagctgagcctgggc 7162232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 16568018 - 16567721
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-tat 285  Q
    ||||||| ||| ||| ||||||||||||| ||||||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||| |||||| | |    
T  16568018 cagtggcggagtcagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttacttccttcctgggaataatttcacatttcctgcggataattt 16567919  T
Q  286 c---tttcctgcggaaact-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaa 377  Q
    |   |||||||||||| ||     ||||||| ||||||||||  ||||||||||||||||||  |||||||| || ||||| ||||||||| |||| |||    
T  16567918 cacatttcctgcggaatctgcaggaaatcctaggcaaaatctgtaggaaatgtgtttcctgcgaaatttacataacaattcgcaggtaaatccgcaagaa 16567819  T
Q  378 aagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    |||||||||  | ||||||||| ||| ||||||||||||||| ||||||||||| ||||||    |||||||||||||| ||||||||||||||||||    
T  16567818 aagctaaaagttctagtaatggctggacttgctacaaagaaaattggagctgagcctgggctagtgcccaggctagctggggggtggctccgcccctg 16567721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 203 - 472
Target Start/End: Original strand, 32953572 - 32953850
Alignment:
Q  203 aattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-tatc---tttcctgcggaa 298  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||||| ||| |||||||||||||||||||| | |||| | ||   ||||||||||||    
T  32953572 aattttatagagcctgtgcaaaaaagttatcgcaaaatgttacttccttcctacgaataatttcacatttcctgcagataatttcacatttcctgcggaa 32953671  T
Q  299 act-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttag 393  Q
     ||     ||||||| |||||||||| ||||||||||||||||| | ||||||||| |||||||  ||||||||| || ||||||||||||||  | |||    
T  32953672 tctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctacggaatttacataaaaatttgcaggtaaatccgtaggaaaagctaaaagttctag 32953771  T
Q  394 taatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
    |||||| ||||||||||||||||||| ||||||||||| || |||    |||||||||||||| |||||||||||||||    
T  32953772 taatggctgggcttgctacaaagaaaattggagctgagcctcggctagtgcccaggctagctggggggtggctccgccc 32953850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 259 - 475
Target Start/End: Complemental strand, 34444100 - 34443896
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||  |||| ||| ||||||| |||||||| |    
T  34444100 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgcatttcttgcggaatttagacaaaaatcc 34444001  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgag 458  Q
                ||||||||||||| ||| | |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  34444000 ------------gcaggaaaagctacaaattctagtaatggtagggcttgctacaaagaaagttggagctgagcctgggcactagcccaggctagctggg 34443913  T
Q  459 gggtggctccgcccctg 475  Q
    |||||||||||||||||    
T  34443912 gggtggctccgcccctg 34443896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 185 - 476
Target Start/End: Original strand, 1672373 - 1672672
Alignment:
Q  185 tccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-t 283  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| || | |||| |    
T  1672373 tccagtggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgcagataat 1672472  T
Q  284 atc---tttcctgcggaaact-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcagg 375  Q
     ||   ||||||  |||| ||     ||||||| |||||||||| ||| |||| |||||||||| |||| |||| |||||||| ||||||||| ||||||    
T  1672473 ttcacatttcctatggaatctgtaggaaatcctaggcaaaatctgcagaaaatatgtttcctgcggaatgtacataaaaattcgcaggtaaatccgcagg 1672572  T
Q  376 aaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||| | |||||  | |||||||||||||| |||||||||||||| ||||||||||| ||| ||    |||||||||||||| ||||||||||||||||||    
T  1672573 aaaggataaaagttctagtaatggttgggattgctacaaagaaaattggagctgagcctgagctagtgcccaggctagctg-ggggtggctccgcccctg 1672671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 187 - 475
Target Start/End: Original strand, 43228531 - 43228827
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-tat 285  Q
    ||||||| ||||||| ||||||||||||||||||||||||| | ||||||||| |||||| | | |||||||||||||||| ||||| | | |||| | |    
T  43228531 cagtggcggagccagaaattttatagagcctgggcaaaaaactaatcgcaaaatgttactcctttcctgcgaataatttcatatttcttgcagataattt 43228630  T
Q  286 c---tttcctgcggaaact-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaa 377  Q
    |   |||||||||||| ||     ||||||| |||||||||| ||||||||||||||||||| ||||||||| ||| || | ||||||||| || |||||    
T  43228631 cacatttcctgcggaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaacatccgcaggtaaatccgtaggaa 43228730  T
Q  378 aagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    |||||||||  | ||||||||| ||||||||||||||||||| |||||| |||| || |||    |||||||||||||| ||||||||||||||||||    
T  43228731 aagctaaaagttctagtaatggctgggcttgctacaaagaaaattggagttgagccttggctagtgcccaggctagctg-ggggtggctccgcccctg 43228827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 295 - 438
Target Start/End: Original strand, 16667499 - 16667642
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||  | ||||    
T  16667499 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcaggtaaatccgcaggaaaagctaaaagttctagt 16667598  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggc 438  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||    
T  16667599 aatggctggacttgctacaaagaaagttggagctgagtctgggc 16667642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 295 - 475
Target Start/End: Complemental strand, 21069107 - 21068927
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| ||||||| |||||||||||| ||||||||||||||| ||| |||| ||||||||||| | ||||||||| ||||||||| |||||||| | ||||    
T  21069107 ggaacctaaatctttggcaaaatctgcaggaaatgtgtttcttgcggaatatacacaaaaatgcgcaggtaaatccgcaggaaaggctaaaaattctagt 21069008  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||||||||| |||||||||||||| ||| |||| ||| ||    |||||||||||||| || |||||||||||||||    
T  21069007 aatggttgggcttactacaaagaaagttagagttgagcctgagctagtgcccaggctagctggggtgtggctccgcccctg 21068927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 295 - 439
Target Start/End: Original strand, 17192675 - 17192819
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| ||||||||||| |||||||| |||||||||| |||||||| ||||| |||||||||| | | ||||||| |||||||| ||||||||  | ||||    
T  17192675 ggaacctaaatccttgacaaaatctgcaggaaatgtatttcctgcggaattgacacaaaaatccgccggtaaatccgcaggaagagctaaaagttctagt 17192774  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggca 439  Q
    ||||| || |||||||||||||||||||||||||||| |||||||    
T  17192775 aatggctgagcttgctacaaagaaagttggagctgagcctgggca 17192819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 365 - 474
Target Start/End: Complemental strand, 2476444 - 2476335
Alignment:
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
    |||| |||||||||||||||||| | |||||||||| || ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| ||    
T  2476444 aaatccgcaggaaaagctaaaaattctagtaatggtaggacttgctacaaagaaaattggagctgagcctgggcactagcccaggctagctggggggagg 2476345  T
Q  465 ctccgcccct 474  Q
    ||||||||||    
T  2476344 ctccgcccct 2476335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 275
Target Start/End: Original strand, 13942640 - 13942729
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||||||| ||||||| |||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  13942640 ccagtggcggagccagaaattttatagagcctgggtaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 13942729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 327
Target Start/End: Original strand, 14832699 - 14832860
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcga---------------------ataattt 265  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||                     |||||||    
T  14832699 cagtggcggagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 14832798  T
Q  266 cacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaa 327  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14832799 cacatttcctacggatatatctttcctgcggaatctaaatccttggcaaaatctacaggaaa 14832860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 475
Target Start/End: Complemental strand, 37779854 - 37779595
Alignment:
Q  203 aattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttcctgcggaaacta 302  Q
    ||||||||||||| || |||||||| |||||| |||| |||||||||| || ||||||||||||||||||||| ||||   ||||     || | ||       
T  37779854 aattttatagagcttgtgcaaaaaaattatcgtaaaatgttacttccttccagcgaataatttcacatttcctgcgga---atct-----gcaggaa--- 37779766  T
Q  303 aatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttg 402  Q
     ||||| | |||||||| ||||||||||||||| | | ||||||||| ||| |||| ||||||||| ||||| |||| ||||||  | ||||||||| ||    
T  37779765 -atcctagacaaaatctgcaggaaatgtgtttcatacggaatttacataaatattcgcaggtaaatccgcagaaaaaactaaaagttctagtaatggctg 37779667  T
Q  403 ggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
      ||||||||||||||| |||||| |||| |||| |    |||||||||||||| ||||||||||||||||||    
T  37779666 aacttgctacaaagaaaattggagttgagcctggactagtgcccaggctagctg-ggggtggctccgcccctg 37779595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 2476592 - 2476504
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  2476592 cagtggcggagccagaaattatatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcct 2476504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 428
Target Start/End: Original strand, 12267420 - 12267548
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatgg 399  Q
    |||||| | ||||||||||||||||||||||||||| ||| ||||||||| |||||| | ||||||||| | |||||||||||||||  | ||||||| |    
T  12267420 ctaaattcgtggcaaaatctacaggaaatgtgtttcttgcggaatttacataaaaatccgcaggtaaatccacaggaaaagctaaaagttctagtaattg 12267519  T
Q  400 ttgggcttgctacaaagaaagttggagct 428  Q
     | ||||||||||||||||||||||||||    
T  12267520 ctaggcttgctacaaagaaagttggagct 12267548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 475
Target Start/End: Complemental strand, 15504014 - 15503847
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||            |||| |||||||||||||||||| | ||||    
T  15504014 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaa------------aaatccgcaggaaaagctaaaaattctagt 15503927  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||| ||||||||||||||||| ||| || |||| ||||||    |||||| ||||||  ||||||||||||||||||    
T  15503926 aatggttaggcttgctacaaagaaatttgaaggtgagcctgggctagtgcccagactagct-tggggtggctccgcccctg 15503847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 21069240 - 21069142
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttcctg 293  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||| | |||||||||||||||    
T  21069240 gagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacgttatttccttcctggaaataatttcacatttcctgcagatatatctttcctg 21069142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 37552144 - 37552048
Alignment:
Q  184 ctccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacgga 280  Q
    |||||||||  ||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||||||||||||||||||| ||||    
T  37552144 ctccagtggtggagccagaaattttatagagcctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttcctgcgga 37552048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 37654974 - 37654878
Alignment:
Q  184 ctccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacgga 280  Q
    |||||||||  ||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||||||||||||||||||| ||||    
T  37654974 ctccagtggtggagccagaaattttatagagcctgggcaaaaaaattattgcaaaatgttacttccttcctgcgaataatttcacatttcctgcgga 37654878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 187 - 282
Target Start/End: Original strand, 12267271 - 12267366
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    ||||||| |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||| || ||||||    
T  12267271 cagtggcggagccagacattttatagagcctgggcaaaaagtttatcgcaaaacgttacttccttcctgtgaataatttcacattttctgcggata 12267366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 15504176 - 15504088
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||| ||||||| |||| |||||||||| | ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  15504176 cagtggcggagccagaaattatatagagcctcgacaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcct 15504088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 34444194 - 34444105
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaat-ttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||| |||| |||||||||| |||||||||||||||||  |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  34444194 cagtggcggagctaggaattttagagagcctgggcaaaaaaaattatcgcaaaacgttacttccttcctacgaataatttcacatttcct 34444105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 475
Target Start/End: Original strand, 13942790 - 13942968
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtg---tttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaa 396  Q
    |||||||||||||||||||| |||||||||||   |||  ||  |||| |||||||||||   |||||||||  | |||||||||| |||  | ||||||    
T  13942790 ctaaatccttggcaaaatctgcaggaaatgtggtgtttattgtggaatctacacaaaaatctgcaggtaaatcggtaggaaaagctcaaagttctagtaa 13942889  T
Q  397 tggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
     || |||| |||||||||||||||||||| ||||| ||||||    ||||||||||| || | ||||||||||||||||    
T  13942890 aggctgggtttgctacaaagaaagttggacctgagcctgggctagtgcccaggctagttgggaggtggctccgcccctg 13942968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 372 - 475
Target Start/End: Original strand, 14832854 - 14832955
Alignment:
Q  372 caggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcc 471  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||  |||||| |||||| |||||||    
T  14832854 caggaaaagataaaaattttagtaatggttggacttgctacaaa-aaagttggagccgagcctgggtactagcccagcttagctg-ggggtgactccgcc 14832951  T
Q  472 cctg 475  Q
    ||||    
T  14832952 cctg 14832955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 36234456 - 36234529
Alignment:
Q  200 aggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttc 273  Q
    |||||||||||||||  ||| ||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  36234456 aggaattttatagagtttggacaaaaaatttatcgcaaaatgttacttccttcttgcgaataatttcacatttc 36234529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 203 - 475
Target Start/End: Complemental strand, 37607647 - 37607386
Alignment:
Q  203 aattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttcctgcggaaacta 302  Q
    ||||||||||||| || |||||||| |||||| |||| |||||||||| || || |||||||||||||||||| |||| ||       ||||    |  |    
T  37607647 aattttatagagcttgtgcaaaaaaattatcgtaaaatgttacttccttccagcaaataatttcacatttcctgcgga-at-------ctgc----agga 37607560  T
Q  303 aatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa--aatttagtaatggt 400  Q
    |||||| | |||||||| ||||||||||||||| | | ||||||||| ||| |||  ||||||||| ||||| |||| ||||||    | | |||||||     
T  37607559 aatcctagacaaaatctgcaggaaatgtgtttcatacggaatttacataaatatttgcaggtaaatccgcagaaaaaactaaaagttctctcgtaatggc 37607460  T
Q  401 tgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||  ||||||||||||||| |||||| |||| |||| |    |||||||||||||| ||||||||||||||||||    
T  37607459 tgaacttgctacaaagaaaattggagttgagcctggactagtgcccaggctagctg-ggggtggctccgcccctg 37607386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 315 - 431
Target Start/End: Complemental strand, 37654878 - 37654762
Alignment:
Q  315 aatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaa 414  Q
    ||||| |||||||||||||||||   ||||||||| || ||||| ||||||||| ||||||||||| |||||  | ||||||| | ||| ||||||| ||    
T  37654878 aatctgcaggaaatgtgtttcctatggaatttacataacaattcgcaggtaaatccgcaggaaaagataaaagttctagtaatagctggacttgctagaa 37654779  T
Q  415 agaaagttggagctgag 431  Q
    ||||| |||||||||||    
T  37654778 agaaaattggagctgag 37654762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 6900992 - 6900899
Alignment:
Q  189 gtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    ||||| ||| ||| ||||| ||||||  || | |||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  6900992 gtggcggagacagaaatttaatagagtatgagtaaaaaatttatcgcaaaatgttacttccttcatgcgaataatttcacatttcctgcggata 6900899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 337 - 438
Target Start/End: Complemental strand, 9738440 - 9738339
Alignment:
Q  337 tgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgg 436  Q
    ||||||||||||||||||||   ||||||||| ||||||||| || | ||  | |||||||||||||||||||| |||||||||| | ||||||||| ||    
T  9738440 tgcagaatttacacaaaaatctgcaggtaaatccgcaggaaatgcgagaagttctagtaatggttgggcttgcttcaaagaaagtagaagctgagtcagg 9738341  T
Q  437 gc 438  Q
    ||    
T  9738340 gc 9738339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 297
Target Start/End: Original strand, 8214526 - 8214638
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt-cctacggatata 284  Q
    |||||||| || ||||||||| || ||||||| || |||||| |||||| |||| ||||| | || |||||||||||||||| ||||  || ||||||||    
T  8214526 ccagtggcggaaccaggaattataaagagccttggtaaaaaaattatcgtaaaatgttacgtacttcctgcgaataatttcatatttgtctgcggatata 8214625  T
Q  285 tctttcctgcgga 297  Q
    |||||||||||||    
T  8214626 tctttcctgcgga 8214638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 391 - 475
Target Start/End: Complemental strand, 13694849 - 13694766
Alignment:
Q  391 tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||||| ||||||||||||||||||||||| || |||| ||||||    |||||||||||||| ||||||||||||||||||    
T  13694849 tagtaatggatgggcttgctacaaagaaagttgaagttgagcctgggctagtgcccaggctagctg-ggggtggctccgcccctg 13694766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 431
Target Start/End: Complemental strand, 37552048 - 37551932
Alignment:
Q  315 aatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaa 414  Q
    |||||||||||||||||||||||    |||||||| || ||||| ||||||| | ||||||||||| |||||  | ||||||| | ||| ||||||| ||    
T  37552048 aatctacaggaaatgtgtttcctatgaaatttacataacaattcgcaggtaactccgcaggaaaagataaaagttctagtaatagctggacttgctagaa 37551949  T
Q  415 agaaagttggagctgag 431  Q
    ||||| |||||||||||    
T  37551948 agaaaattggagctgag 37551932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 2476494 - 2476431
Alignment:
Q  264 ttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaa 327  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  ||||||  |||||||    
T  2476494 ttcacatttcctacggatatatctttcctgcggaacctaaatccttgataaaatccgcaggaaa 2476431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 767380 - 767293
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||| ||||||||||||||||| ||  |||||||||||||||||| ||||||| |||||||| |    |||||| |||||||||||||||||    
T  767380 ggaatctaaatccttggcaaaacctgtaggaaatgtgtttcctgcggaatttatacaaaaatcc----gtaaatccgcaggaaaagctaaaa 767293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 30249184 - 30249123
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgc 256  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||| ||| || |||||    
T  30249184 gagccaggaattttacagagtctgggcaaaaaatttatcgcaaaacgttgctttcttcctgc 30249123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 365 - 477
Target Start/End: Original strand, 36234646 - 36234757
Alignment:
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
    |||| |||| |||||| |||||  | || |||||| ||||||||||||||||||| ||||||||||||||||||    | |||||||| ||| |||||||    
T  36234646 aaatccgcatgaaaagttaaaagttctaataatggctgggcttgctacaaagaaaattggagctgagtctgggctagtgtccaggctaactg-ggggtgg 36234744  T
Q  465 ctccgcccctgtg 477  Q
    |||||||| ||||    
T  36234745 ctccgcccatgtg 36234757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 474
Target Start/End: Complemental strand, 13695095 - 13694982
Alignment:
Q  360 caggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgagg 459  Q
    ||||||||| | |||||||||| | ||  | ||||||||| ||  ||||||||||||||||||| ||||||| ||| ||    ||||||||||||| |||    
T  13695095 caggtaaatccacaggaaaagcgagaagttctagtaatggatgaacttgctacaaagaaagttgaagctgagcctgagctagtgcccaggctagct-agg 13694997  T
Q  460 ggtggctccgcccct 474  Q
    |||||||||||||||    
T  13694996 ggtggctccgcccct 13694982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 25035035 - 25034985
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaa 237  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  25035035 cagtggcggagtcaggaatttcatagagcctgggcaaaaaatttatcgcaa 25034985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 436
Target Start/End: Complemental strand, 6900807 - 6900742
Alignment:
Q  371 gcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgg 436  Q
    ||||||||||||||||  | ||||||||| || ||||||||||||||||||||||| |||| ||||    
T  6900807 gcaggaaaagctaaaagttctagtaatggctgagcttgctacaaagaaagttggagttgaggctgg 6900742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 767490 - 767430
Alignment:
Q  222 aaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    ||||||||||| |||||||||||||| || ||||||||||||||| ||||| || ||||||    
T  767490 aaaaaatttattgcaaaacgttactttcttcctgcgaataatttctcattttctgcggata 767430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 2985920 - 2985872
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcg 234  Q
    |||||||| |||||||||||| |||||||||||||| ||||||||||||    
T  2985920 ccagtggcggagccaggaattatatagagcctgggcgaaaaatttatcg 2985872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 4306673 - 4306724
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  4306673 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaa 4306724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 15497447 - 15497498
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  15497447 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaa 15497498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 475
Target Start/End: Complemental strand, 42989574 - 42989463
Alignment:
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggc-actagcccaggctagctgaggggtg 463  Q
    |||||||||| |||||| | ||  | ||||||||| |||||||||  |||||||||| | ||||||  |||||| | |  ||||||||||||| ||||||    
T  42989574 aaattcgcagaaaaagcgagaagttctagtaatggctgggcttgcctcaaagaaagtagaagctgatcctgggctagtgccccaggctagctggggggtg 42989475  T
Q  464 gctccgcccctg 475  Q
    ||||||||||||    
T  42989474 gctccgcccctg 42989463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 39605931 - 39606011
Alignment:
Q  394 taatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    |||||| ||| |||| |||||||||||| | ||||||||||||||    || ||||||||||| ||||||||||||||||||    
T  39605931 taatggatggacttgttacaaagaaagtagaagctgagtctgggctagtgctcaggctagctg-ggggtggctccgcccctg 39606011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 42989606 - 42989569
Alignment:
Q  321 caggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  42989606 caggaaatgtgtttcctgcggaatttacacaaaaattc 42989569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 297
Target Start/End: Original strand, 39605784 - 39605840
Alignment:
Q  241 gttacttcctacctgcgaataatttcacatttcctacggatatatctttcctgcgga 297  Q
    |||||||| | | |||| |||||| |||||||||| |||||||||||||||||||||    
T  39605784 gttacttcattcatgcggataattgcacatttcctgcggatatatctttcctgcgga 39605840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 14317194 - 14317151
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||||||| |||||||||||| | ||||||||||||||||    
T  14317194 gagccaggaattatatagagcctggacgaaaaatttatcgcaaa 14317151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 42989724 - 42989673
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaa 239  Q
    |||||| ||| |||||||||||||||| |||| |||||||||||| ||||||    
T  42989724 agtggcggagtcaggaattttatagagtctggacaaaaaatttattgcaaaa 42989673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 15504083 - 15504045
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcgga 297  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  15504083 ataatttcacatttcctgcggatatatctttcccgcgga 15504045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 31649080 - 31649118
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaa 225  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  31649080 cagtggcggagccaggaaatttatagagcctgggcaaaa 31649118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 297
Target Start/End: Complemental strand, 6900908 - 6900863
Alignment:
Q  252 cctgcgaataatttcacatttcctacggatatatctttcctgcgga 297  Q
    |||||| ||||||||||||||| | ||||||||||||||| |||||    
T  6900908 cctgcggataatttcacatttcttgcggatatatctttcccgcgga 6900863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 356
Target Start/End: Original strand, 7159612 - 7159668
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaat 356  Q
    |||||| ||||||||||||  ||||||| ||||||||||| |||| ||||| |||||    
T  7159612 ctaaattcttggcaaaatccgcaggaaacgtgtttcctgcggaatgtacaccaaaat 7159668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 225
Target Start/End: Complemental strand, 12448280 - 12448236
Alignment:
Q  181 tgactccagtggcagagccaggaattttatagagcctgggcaaaa 225  Q
    ||||| ||||||| |||||||||| ||||||||||||||| ||||    
T  12448280 tgacttcagtggcggagccaggaaatttatagagcctgggtaaaa 12448236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 38397550 - 38397590
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaa 227  Q
    ||||||| ||||||||||| ||||| |||||||||||||||    
T  38397550 cagtggcggagccaggaatattataaagcctgggcaaaaaa 38397590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 203; Significance: 1e-110; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 186 - 476
Target Start/End: Original strand, 31844528 - 31844818
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatat 285  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  31844528 ccagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttccttcctgcgaataatttcacatttcctacggatatat 31844627  T
Q  286 ctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaa 385  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||   ||||||||| || |||||||||||||    
T  31844628 ctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatctgcaggtaaatccgtaggaaaagctaaa 31844727  T
Q  386 aaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctgt 476  Q
    |  | |||||||||||||| |||||| |||||||||||||| |||| |||||||||||  ||||||||||| |||||||||||||||||||    
T  31844728 atttctagtaatggttgggtttgctagaaagaaagttggagttgagcctgggcactagatcaggctagctggggggtggctccgcccctgt 31844818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 8239499 - 8239210
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  8239499 cagtggcggagccaggaattttatagaacctaggcaaaaaatttatcgcaaaacgttacttccttcctatgaataatttcacatttcctacggatatatc 8239400  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaa--atgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaa 384  Q
    |||||||||||| |||||||||||||||||||| ||||||  || | |||||||| |||||||||||||||| | |||||||||  ||||||||||||||    
T  8239399 tttcctgcggaacctaaatccttggcaaaatctgcaggaaatatatatttcctgcggaatttacacaaaaatccgcaggtaaatctgcaggaaaagctaa 8239300  T
Q  385 aaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||| | |||||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  8239299 aaattctagtaatggtagggattactacaaagaaagttggagctgagcctgggcactagcccaggctagctg-ggggtggctccgcccctg 8239210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 186 - 475
Target Start/End: Complemental strand, 6331893 - 6331606
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatat 285  Q
    |||||||| || |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  6331893 ccagtggcggaaccaggaattttatagagcatgagcaaaaaatttatcgcaaaacgttacttccttccttcaaataatttcacatttcctacggatatat 6331794  T
Q  286 ctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaa 385  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| |  |||||||  ||||||||||||||||    
T  6331793 ctttcctgcggaacctaaatccttggcaaaatctgtaggaaatgtgtttcctgcggaatttacacaaaaatccggaggtaaacccgcaggaaaagctaaa 6331694  T
Q  386 aaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    |  | |||||||||||| | |||||||| ||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||||    
T  6331693 atttctagtaatggttgagtttgctacatagaaagttggagccgagcctgggcactagcccaggctagct--ggggtggctccgcccctg 6331606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 187 - 476
Target Start/End: Complemental strand, 14727557 - 14727247
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct----------- 275  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||               
T  14727557 cagtggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataattt 14727458  T
Q  276 ----------acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
              || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | | ||||||    
T  14727457 cacatttcctacagatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaactccgcaggta 14727358  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggc 465  Q
    ||| |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  14727357 aatccgcaggaaaagctaaaaattctagtaatggttggacttgctacaaagaaagttggagctgagcctgggcactagcccaggctagcttgggggtggc 14727258  T
Q  466 tccgcccctgt 476  Q
    |||||||||||    
T  14727257 tccgcccctgt 14727247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 47626416 - 47626244
Alignment:
Q  16 caaaatcacggccaaaatgacaaccaaaacaacaatgattgcaaccacattggttggaatatttctccctcctgtcaaacattatcatattgacattaat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47626416 caaaatcacggccaaaatgacaaccaaaacaacaatgattgcaaccacattggttggaatatttctccctcctgtcaaacattatcatattgacattaat 47626317  T
Q  116 tccagacagttaaaagttcttaataaataattttggatgtaatcacaaggtttttaaagtgtatgtgactcca 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  47626316 tccagacagttaaaagttcttaataaataattttggatgtaatcacaaggttttcaaagtctatgtgactcca 47626244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 187 - 476
Target Start/End: Complemental strand, 27460905 - 27460625
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-tat 285  Q
    ||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| | |||| | |    
T  27460905 cagtggcggagccaagaattttatagagcctggg-aaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataattt 27460807  T
Q  286 c---tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagct 382  Q
    |   |||||| ||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||| |            ||| ||||||||    
T  27460806 cacatttcctacggaacctaaatccttggcaaaatctgcaggaaatgtgtttccttcggaatttacacaaaaatcc------------gcaagaaaagct 27460719  T
Q  383 aaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctgt 476  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||||||||||||||    
T  27460718 aaaaattctagtaatggttgggcttgctacaaagaaagttggagctgagcctgggcactagcccatgctagctagggggtggctccgcccctgt 27460625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 185 - 475
Target Start/End: Original strand, 27583903 - 27584198
Alignment:
Q  185 tccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctac-----------------ctgcgaataatttca 267  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |                 ||||  |||||||||    
T  27583903 tccagtggcggagccaggaattttatagagcctgagcaaaaaatttatcgcaaaacgttacttcctgcgaataatttcacatttcctgcagataatttca 27584002  T
Q  268 catttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaa 367  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||            |||    
T  27584003 catttcctacggatatatctttcctggggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaa 27584090  T
Q  368 ttcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctc 467  Q
    | |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||    
T  27584091 tccgcaggaaaagctaaaaattctagtaatggtttggcttgctacaaagaaagttggagccgagcctgggcgctagcccaggctagctggggggtggctc 27584190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 188 - 472
Target Start/End: Original strand, 33468860 - 33469121
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatct 287  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  33468860 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacagatatatct 33468959  T
Q  288 ttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaa 387  Q
    ||||||||||| ||||||||||| |||||| | |||||||||||||||||                     || ||||||| |||||||||||||||||     
T  33468960 ttcctgcggaacctaaatccttgacaaaatttgcaggaaatgtgtttcct---------------------acgggtaaatccgcaggaaaagctaaaat 33469038  T
Q  388 atttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
     | ||||||||||||   |||||| ||||||||||||||||||| || ||||||||||||||||||||  |||||||||||||||    
T  33469039 ttctagtaatggttgaatttgctataaagaaagttggagctgagcctaggcactagcccaggctagct--ggggtggctccgccc 33469121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 185 - 475
Target Start/End: Complemental strand, 25007693 - 25007394
Alignment:
Q  185 tccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct--------- 275  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||             
T  25007693 tccagtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaa 25007594  T
Q  276 ------------acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacagg 363  Q
                ||||||||||||||||||| ||| |||||||||||||||||||| ||||||||   |||| ||| |||||||||||||||| |         
T  25007593 ttcacatttcctacggatatatctttcctgcagaacctaaatccttggcaaaatctgcaggaaatacatttcttgcggaatttacacaaaaatcc----- 25007499  T
Q  364 taaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtg 463  Q
           ||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||    
T  25007498 -------gcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttggagctgagcctgggcattagcccaggctagctggggggtg 25007406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 190 - 475
Target Start/End: Original strand, 37153881 - 37154175
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct-------------- 275  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||                  
T  37153881 tggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaattcac 37153980  T
Q  276 -------acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaat 368  Q
           |||||||||||||||||| |||| |||||||||||||||||||| ||||||||   |||||||| |||||||||||||||| |              
T  37153981 atttcctacggatatatctttcctgtggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatcc---------- 37154070  T
Q  369 tcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctcc 468  Q
      ||||||||||||||||| | |||||||||| | |||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  37154071 --gcaggaaaagctaaaaattctagtaatggtagagcttcctacaaagaaagttggagctgagcctgggcactagcccaggctagctggggggtggctcc 37154168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 44305639 - 44305342
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct----------- 275  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||               
T  44305639 cagtggcggagccaggaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaatt 44305540  T
Q  276 ----------acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
              |||||||||||||||||| |||| |||||||||||||||||||| ||||||||   |||||||| |||||||||||||||| |           
T  44305539 cacatttcctacggatatatctttcctgtggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatcc------- 44305447  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggc 465  Q
         ||||||||||||||||| | ||||||| || |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  44305446 -----gcaggaaaagctaaaaattctagtaattgtagggcttcctacaaagaaagttggagctgagcctgggcactagcccaggctagctggggggtggc 44305352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 259 - 436
Target Start/End: Original strand, 25011518 - 25011682
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||| ||||||||||||          
T  25011518 ataatttcacatttcctacggatatatctttc-tgcggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcggaatttacacaa------ 25011610  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgg 436  Q
          |||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||    
T  25011611 ------aaatccgcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttggagctgagcctgg 25011682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 9527284 - 9527181
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||||||||    
T  9527284 cagtggcagagccagaaattttatagagtatgggcaaaaaatttatcgcaaaacgttactgtcttcctgcgaataatttcacatttcctatggatatatc 9527185  T
Q  287 tttc 290  Q
    ||||    
T  9527184 tttc 9527181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 34459340 - 34459238
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttcctgc 294  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||  |||||||||||||||||||||| |||||||||||| |||    
T  34459340 gagccaggaattttatagagtctgggcaaaaaatttatcacaaaacgttacttccttcccacgaataatttcacatttcctacagatatatctttcttgc 34459241  T
Q  295 gga 297  Q
    |||    
T  34459240 gga 34459238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 300 - 431
Target Start/End: Original strand, 48940438 - 48940569
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatgg 399  Q
    ||||||||||| |||||||| || |||||||||||||||| |||||||||||||||| | ||  ||||| |||||||||||||||||  | |||||||||    
T  48940438 ctaaatccttgacaaaatctgcatgaaatgtgtttcctgcggaatttacacaaaaatccgcaaataaatccgcaggaaaagctaaaagttctagtaatgg 48940537  T
Q  400 ttgggcttgctacaaagaaagttggagctgag 431  Q
     | |||||||||||||||| ||||||||||||    
T  48940538 cttggcttgctacaaagaatgttggagctgag 48940569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 295 - 474
Target Start/End: Original strand, 44238875 - 44239042
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||           |||| ||||||||||||  | ||||    
T  44238875 ggaacctaaatccttggcaaaatctacaagaaatgtgtttcctgcagaatttacaaaaaaaatc-----------cgcaagaaaagctaaaatttctagt 44238963  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccct 474  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||    |||||| ||||||| |||||||||||||||||    
T  44238964 aatggctgggctttctacaaagaaagttggagctgagcctgggctagtgcccagactagctg-ggggtggctccgcccct 44239042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 49898607 - 49898505
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttcctgc 294  Q
    ||||||| |||| ||||||| |||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||  ||||||||||||| |||    
T  49898607 gagccagaaattatatagagtctgggcaaaaaatttatcgcaaaatgttacgtccttcctgcgaataatttcacatttcctgtggatatatctttcttgc 49898508  T
Q  295 gga 297  Q
    |||    
T  49898507 gga 49898505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 195 - 327
Target Start/End: Original strand, 1428315 - 1428468
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttca---------------------catttc 273  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||                     ||||||    
T  1428315 gagccaggaattttatagagcctgggcaaaaaatttaccgcaaaacgttacttccttcctacgaataatttcacattttctgcagatagattcacatttc 1428414  T
Q  274 ctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaa 327  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  1428415 ctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaa 1428468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 190 - 282
Target Start/End: Original strand, 4641928 - 4642020
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    |||||||| |||||||||||||||||| | |||||||||  |||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4641928 tggcagagtcaggaattttatagagcccgtgcaaaaaatcaatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcggata 4642020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 300 - 438
Target Start/End: Complemental strand, 24745505 - 24745370
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatgg 399  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||  ||||||||||| || ||  ||||||||||| | ||||||| |    
T  24745505 ctaaatccttggcaaaatctgcagaaaatgtgtttcctgcagaatttacacaaaaaaccacaggtaaatccgtag--aaagctaaaaattctagtaatag 24745408  T
Q  400 ttgggcttgctacaaagaaagttggagctgagtctgggc 438  Q
     |  || || |||||||||||||||||||||| ||||||    
T  24745407 ctcagc-tgttacaaagaaagttggagctgagactgggc 24745370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 195 - 475
Target Start/End: Complemental strand, 24646267 - 24645984
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat----atatc---- 286  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| | |||||||||||||| ||||||| |||||    | |||        
T  24646267 gagccaggaattttatagagcctgggcaaaaaaattatctcaaaatgttacttccttcatgcgaataatttcaaatttcctgcggatccaaaaatccaaa 24646168  T
Q  287 ----tttcct----gcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaa 378  Q
        || |||      |||| |||||||||||||||||||| ||||||||||||||||| | |||| ||||||||||| ||            |||||||    
T  24646167 ggtattacctcacctgggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctacggaatgtacacaaaaatcca------------caggaaa 24646080  T
Q  379 agctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||||  | |||||||||||| | ||||||||||||||||||||| |||| ||| ||    | ||| |||||||| ||||||||||||||||||    
T  24646079 agctaaaagttctagtaatggttgag-ttgctacaaagaaagttggagttgagcctgagctagtgtccatgctagctggggggtggctccgcccctg 24645984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 4774199 - 4774104
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    ||||||| ||||||| |||||||||||| |||||||||||| ||||||||||| ||||||| || |||||||||||||||||||||| | ||||||    
T  4774199 cagtggcggagccagaaattttatagagtctgggcaaaaaaattatcgcaaaatgttactttcttcctgcgaataatttcacatttcttgcggata 4774104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 6801972 - 6802078
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    |||||||||||| || ||||||||||||  ||| |||||||||||||||||||||||| ||||||| |||| |||||| |||||||||| | |||||| |    
T  6801972 cagtggcagagcaagaaattttatagagtttggacaaaaaatttatcgcaaaacgttatttcctacatgcggataattgcacatttcctgcagatatacc 6802071  T
Q  287 tttcctg 293  Q
    |||||||    
T  6802072 tttcctg 6802078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 370 - 475
Target Start/End: Complemental strand, 4774042 - 4773937
Alignment:
Q  370 cgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccg 469  Q
    |||||||||||||||||  | ||||||||| ||||||||||||||| ||| |||||| |||||||||||    |||||||||||||| ||||||||||||    
T  4774042 cgcaggaaaagctaaaagttctagtaatggctgggcttgctacaaaaaaaattggagttgagtctgggctagtgcccaggctagctggggggtggctccg 4773943  T
Q  470 cccctg 475  Q
    ||||||    
T  4773942 cccctg 4773937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 371 - 475
Target Start/End: Complemental strand, 49898449 - 49898345
Alignment:
Q  371 gcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgc 470  Q
    ||||||||||||||||  | ||||||||| ||  |||| |||||||||||||||||||||| ||||||    |||||||||||||| |||||||||||||    
T  49898449 gcaggaaaagctaaaacttctagtaatggctgaacttgttacaaagaaagttggagctgagcctgggctagtgcccaggctagctggggggtggctccgc 49898350  T
Q  471 ccctg 475  Q
    |||||    
T  49898349 ccctg 49898345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 190 - 281
Target Start/End: Complemental strand, 24745629 - 24745540
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat 281  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||  || ||||||| || | |||||||||||||||||||||| |||||    
T  24745629 tggcggagccaggaattttatagagtctgggcaaaaaaattatcgc--aatgttactttcttcatgcgaataatttcacatttcctgcggat 24745540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 439
Target Start/End: Complemental strand, 9527143 - 9527011
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||||||||||||||||| ||||| ||||||||||||   ||||||||| ||||| |            ||||||||||||||||  | ||||    
T  9527143 ggaacctaaatccttggcaaaatctgcaggagatgtgtttcctgtgaaatttacaccaaaatcc------------gcaggaaaagctaaaagttctagt 9527056  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggca 439  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||    
T  9527055 aatggctgggcttgctacaaagaaagttggagctgggcctgggca 9527011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 371 - 430
Target Start/End: Original strand, 1428461 - 1428520
Alignment:
Q  371 gcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctga 430  Q
    ||||||||| ||||||| | |||||||||| |||||||||||||||||||||||||||||    
T  1428461 gcaggaaaaactaaaaattctagtaatggtagggcttgctacaaagaaagttggagctga 1428520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 478
Target Start/End: Complemental strand, 4163455 - 4163369
Alignment:
Q  392 agtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctgtgt 478  Q
    |||||| | ||||||||||| |||||||||||||||| |  ||||||    |||||||||||||| |||||||||||| ||||||||    
T  4163455 agtaatagctgggcttgctataaagaaagttggagctaaacctgggctagtgcccaggctagctggggggtggctccgtccctgtgt 4163369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 25011426 - 25011488
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcct 250  Q
    |||||| | ||||| |||||||||||  |||||||||||| ||||||||||||||||||||||    
T  25011426 agtggcggcgccagaaattttatagaatctgggcaaaaaaattatcgcaaaacgttacttcct 25011488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 436
Target Start/End: Original strand, 4642145 - 4642216
Alignment:
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgg 436  Q
    |||| |||||||||||||||||  | ||||||||| ||  ||||||||||||||||| ||||||||| ||||    
T  4642145 aaatccgcaggaaaagctaaaagttctagtaatggctgaacttgctacaaagaaagtcggagctgagcctgg 4642216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 475
Target Start/End: Original strand, 6802175 - 6802284
Alignment:
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
    |||| |||||||||||| | ||  | ||||||||| || |||||||||||||||||| | || |||| ||||||    |||||||||||||| |||||||    
T  6802175 aaatccgcaggaaaagcgagaagttctagtaatggctgagcttgctacaaagaaagtagaagttgagcctgggctagtgcccaggctagctg-ggggtgg 6802273  T
Q  465 ctccgcccctg 475  Q
    ||| |||||||    
T  6802274 ctctgcccctg 6802284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 4642011 - 4642056
Alignment:
Q  252 cctgcgaataatttcacatttcctacggatatatctttcctgcgga 297  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||    
T  4642011 cctgcggataatttcatatttcctgcggatatatctttcctgcgga 4642056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 476 - 509
Target Start/End: Complemental strand, 47626253 - 47626220
Alignment:
Q  476 tgtgactccaatgcaacatcaattgcacttgatc 509  Q
    ||||||||||||||||||||||||||||||||||    
T  47626253 tgtgactccaatgcaacatcaattgcacttgatc 47626220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 34459126 - 34459086
Alignment:
Q  400 ttgggcttgctacaaagaaagttggagctgagtctgggcac 440  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  34459126 ttgggcctgctacaaagaaagttggagctgagcctgggcac 34459086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 34459201 - 34459165
Alignment:
Q  301 taaatccttggcaaaatctacaggaaatgtgtttcct 337  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34459201 taaatccttggcaaaatctgcaggaaatgtgtttcct 34459165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 226
Target Start/End: Complemental strand, 11647383 - 11647352
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaa 226  Q
    ||||||||||||||||||||||||||||||||    
T  11647383 gagccaggaattttatagagcctgggcaaaaa 11647352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 238
Target Start/End: Complemental strand, 17875614 - 17875579
Alignment:
Q  203 aattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||||||| |||||||||||||||||||||||    
T  17875614 aattttatagagtctgggcaaaaaatttatcgcaaa 17875579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 42817823 - 42817784
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaa 226  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  42817823 cagtggcggagccaggaattttatagagtctgggcaaaaa 42817784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 41753269 - 41753219
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||| ||||    
T  41753269 agtgccagagccaggaattctatagagtttgggcaaaaaatttatcacaaa 41753219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 3830151 - 3830102
Alignment:
Q  189 gtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||| |||||||||| ||||| ||||  |||||||||||||||||||||    
T  3830151 gtggcggagccaggaaatttatggagctcgggcaaaaaatttatcgcaaa 3830102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 434
Target Start/End: Original strand, 16640361 - 16640430
Alignment:
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtct 434  Q
    ||||||||||||||||| | | | | | ||||||||||| ||||||||||||||||| | | ||||||||    
T  16640361 aaattcgcaggaaaagcgagagattcttgtaatggttggtcttgctacaaagaaagtagaaactgagtct 16640430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 21973677 - 21973729
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| ||||||||||||| |||||||||||||  ||||| |||| ||||    
T  21973677 ccagtggcggagccaggaatttcatagagcctgggcggaaaatatatcacaaa 21973729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 187 - 475
Target Start/End: Original strand, 26722847 - 26723134
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  26722847 cagtggcagagtcaggaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcttacggatatatc 26722946  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||||||| |||||| | ||||||||| || ||||||||||||||    
T  26722947 tttcctgcggaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaatccgcaggtaaatccgtaggaaaagctaaaa 26723046  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
      | |||||||||||||  |||||||||| ||||||||||| ||| ||||  |||||||||||||||||| ||||||||||||||||||    
T  26723047 tttctagtaatggttggatttgctacaaaaaaagttggagccgagcctggaaactagcccaggctagctg-ggggtggctccgcccctg 26723134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 187 - 475
Target Start/End: Original strand, 35300316 - 35300625
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttca------------------- 267  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| | | ||||||||||||                       
T  35300316 cagtggcggagccaggaattttatagagcttgggaaaaaaatttatcgtaaaacgttacttccttcttacgaataatttcacatttcctgcagataaatt 35300415  T
Q  268 --catttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
      ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||   |||||||| |||||||||||||||| | ||||||    
T  35300416 cacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaaaatccgcaggta 35300515  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggc 465  Q
    ||| |||||||||||||||| | | |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  35300516 aatccgcaggaaaagctaaacattctagtaatggtagggcttgctacaaagaaagttggagctgagcctgggcactagcccaggctagctggggggtggc 35300615  T
Q  466 tccgcccctg 475  Q
    ||||||||||    
T  35300616 tccgcccctg 35300625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 192 - 475
Target Start/End: Original strand, 41759520 - 41759804
Alignment:
Q  192 gcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatt---tcctacggatatatctt 288  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |    ||||| ||   || ||     
T  41759520 gcagagccaagaattttatagagtctgggcaaaaaatttatcgcacaacgttacttccttcctgcgaataatttcacctcggatcctatggtgttacctc 41759619  T
Q  289 tcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaa 388  Q
      || ||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||| |||| ||||||  ||| ||||||||||||      
T  41759620 aact-cggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacaccaaaatccacaagtaaatctgcaagaaaagctaaaagt 41759718  T
Q  389 tttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    | ||||||||| ||||||||||||||||||||||||||||||| ||||||    |||||||||||||| ||||||||||||||||||    
T  41759719 tctagtaatggctgggcttgctacaaagaaagttggagctgagcctgggctagtgcccaggctagctg-ggggtggctccgcccctg 41759804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 187 - 472
Target Start/End: Original strand, 22206574 - 22206868
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-tat 285  Q
    ||||||| |||| || ||||||||||||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||| | |    
T  22206574 cagtggcggagcaagaaattttatagagcctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggataatct 22206673  T
Q  286 c---tttcctgcggaaact-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaa 377  Q
    |   |||||||||||| ||     |||||||  | ||||||| ||||||||||||||||||| ||||||||| ||| | ||  |||||||| ||||||||    
T  22206674 cacatttcctgcggaatctgcaggaaatcctaagtaaaatctgcaggaaatgtgtttcctgcggaatttacataaacactcgtaggtaaatccgcaggaa 22206773  T
Q  378 aagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
    |||||||||| | ||||||||  ||||||||||||||||||| ||||||||||| ||||||    |||||||||||||| | |||||||||||||    
T  22206774 aagctaaaaattatagtaatgcctgggcttgctacaaagaaaattggagctgagcctgggctagtgcccaggctagctgggtggtggctccgccc 22206868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 187 - 472
Target Start/End: Complemental strand, 22228165 - 22227871
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-tat 285  Q
    ||||||| |||| || ||||||||||||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||| | |    
T  22228165 cagtggcggagcaagaaattttatagagcctgggcaagaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctgcggataatct 22228066  T
Q  286 c---tttcctgcggaaact-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaa 377  Q
    |   |||||||||||| ||     |||||||  | ||||||| ||||||||||||||||||| ||||||||| ||| | ||  |||||||| ||||||||    
T  22228065 cacatttcctgcggaatctgcaggaaatcctaagtaaaatctgcaggaaatgtgtttcctgcggaatttacataaacactcgtaggtaaatccgcaggaa 22227966  T
Q  378 aagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
    |||||||||| | ||||||||  ||||||||||||||||||| ||||||||||| ||||||    |||||||||||||| | |||||||||||||    
T  22227965 aagctaaaaattatagtaatgcctgggcttgctacaaagaaaattggagctgagcctgggctagtgcccaggctagctgggtggtggctccgccc 22227871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 203 - 475
Target Start/End: Original strand, 5991324 - 5991602
Alignment:
Q  203 aattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-tatc---tttcctgcggaa 298  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| ||||||| | |||||| | ||   |||||||| |||    
T  5991324 aattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataattttacatttcttgcggataatttcacatttcctgcagaa 5991423  T
Q  299 act-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttag 393  Q
     ||     ||||||| |||||||||| ||||||||||||||||||| ||||||||| |||    | ||||||||| |||||||||| ||||||  | |||    
T  5991424 tctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaac---cgcaggtaaatccgcaggaaaaactaaaagttctag 5991520  T
Q  394 taatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    |||||| ||||||||||||||||||| |||||| |||| ||||||    |||||||||||||| ||||||||||||||||||    
T  5991521 taatggctgggcttgctacaaagaaaattggagttgagcctgggctagtgcccaggctagctggggggtggctccgcccctg 5991602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 186 - 427
Target Start/End: Original strand, 7873107 - 7873357
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-ta 284  Q
    |||| ||| ||||| | |||||||||||| |||||||||||| ||||||||||| |||||||||| || || |||||||||||||||||| |||||| |     
T  7873107 ccagcggcggagcctgaaattttatagagtctgggcaaaaaaattatcgcaaaatgttacttccttcccgctaataatttcacatttcctgcggataatt 7873206  T
Q  285 tc---tttcctgcggaaact-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcagga 376  Q
    ||   |||| || |||| ||     ||||||| |||||||||| ||||||||||||||||||| ||||||||| |||||  | ||||||||| ||||| |    
T  7873207 tcacatttcatgtggaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaacccgcaggtaaatccgcagaa 7873306  T
Q  377 aaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagc 427  Q
    ||||||||||  | ||||||||||||||||||||||||||||| |||||||    
T  7873307 aaagctaaaagttctagtaatggttgggcttgctacaaagaaaattggagc 7873357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 259 - 379
Target Start/End: Original strand, 23704450 - 23704570
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | || |||||||||||||||| |    
T  23704450 ataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgttttcggcggaatttacacaaaaatcc 23704549  T
Q  359 acaggtaaattcgcaggaaaa 379  Q
    |||||||||| ||||||||||    
T  23704550 acaggtaaatccgcaggaaaa 23704570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 190 - 476
Target Start/End: Original strand, 25688102 - 25688376
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatcttt 289  Q
    |||| ||||||| |||||||||||||||||| |||||| |||||| |||| ||||||||||  ||| ||||||||||||||||||| ||||   ||||      
T  25688102 tggcggagccagaaattttatagagcctgggtaaaaaaattatcgtaaaatgttacttcctttctgtgaataatttcacatttcctgcgga---atct-- 25688196  T
Q  290 cctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaat 389  Q
       || | ||    ||||| |||||||||| |||||||| |||||||||| ||||||||| ||| |||  |||||||||  ||||||||||||||||  |    
T  25688197 ---gcaggaa----atcctaggcaaaatctgcaggaaatatgtttcctgcggaatttacataaacatttgcaggtaaatctgcaggaaaagctaaaagtt 25688289  T
Q  390 ttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggc-actagcccaggctagctgaggggtggctccgcccctgt 476  Q
    |||||||||| || |||||||||||||||| |||||||||||||||||| | || ||||| ||| ||| | |||||||||||||||||    
T  25688290 ttagtaatggctgagcttgctacaaagaaaattggagctgagtctgggctagta-cccagactaactgggtggtggctccgcccctgt 25688376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 187 - 297
Target Start/End: Complemental strand, 3012549 - 3012439
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| ||||||| |||||||||||| |||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  3012549 cagtggcggagccagaaattttatagagtctgggcaaaaaaattattgcaaaacgttacttccttcctgtgaataatttcacatttcctgcggatatatc 3012450  T
Q  287 tttcctgcgga 297  Q
    |||||||||||    
T  3012449 tttcctgcgga 3012439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 295 - 423
Target Start/End: Complemental strand, 3012408 - 3012280
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| ||| |||||||||||||||| |||||| |||||||||||| |||| |||||||||||   ||||||||| |||||||||||||||||  | ||||    
T  3012408 ggaacctatatccttggcaaaatctgcaggaagtgtgtttcctgcggaatgtacacaaaaatcggcaggtaaatccgcaggaaaagctaaaagttctagt 3012309  T
Q  395 aatggttgggcttgctacaaagaaagttg 423  Q
    |||||||||||||||||||||||||||||    
T  3012308 aatggttgggcttgctacaaagaaagttg 3012280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 814861 - 814964
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||| | ||||| ||||||||||||||| || ||||||||||    
T  814861 cagtggcggagccaggaattatatagagtctgggcaaaaaaattatcgcaaaacgttacttcattcctgctaataatttcacattttctgcggatatatc 814960  T
Q  287 tttc 290  Q
    ||||    
T  814961 tttc 814964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 28693899 - 28693986
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||||||||| ||||||    
T  28693899 gagccaggaattttatagagcctgggcaaaaaaattatcgcaaaactttacttcctttctgcgaataatttcacatttcctccggata 28693986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 295 - 475
Target Start/End: Original strand, 28694057 - 28694236
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||||| || ||| |||| | |||  | ||||    
T  28694057 ggaacctaaatcctgggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaaatccgcagctaaatccg-aggcaaagtttaaagttctagt 28694155  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    |||||  |  ||||||||||||||||||||||||||| |||||     | |||||||||||| ||| ||||| ||||||||    
T  28694156 aatggcggaacttgctacaaagaaagttggagctgagcctgggttagtgtccaggctagctgggggatggctacgcccctg 28694236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 198 - 356
Target Start/End: Original strand, 38991076 - 38991238
Alignment:
Q  198 ccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat-atatc---tttcctg 293  Q
    ||||||||||||||||| | || ||||||| ||||||||||||||||  | || |||||||||||||||| |||||||||| || || ||   ||| |||    
T  38991076 ccaggaattttatagagtccggacaaaaaagttatcgcaaaacgttatcttcttcctgcgaataatttcatatttcctacgaataatttcacattttctg 38991175  T
Q  294 cggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaat 356  Q
    ||||  |||||||||||||||||||| ||||||||||||||||  | ||||||| ||||||||    
T  38991176 cggatcctaaatccttggcaaaatctgcaggaaatgtgtttccaacggaatttatacaaaaat 38991238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 300 - 475
Target Start/End: Original strand, 21932801 - 21932963
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatgg 399  Q
    ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| ||             ||||||||||| |||||  |||||||||||    
T  21932801 ctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatttacacaaatat-------------cgcaggaaaagttaaaagttttagtaatgg 21932887  T
Q  400 ttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||||||||||||||||||||||| |||| ||||||    ||||||||||  || ||||||||||| ||||||    
T  21932888 ttgggcttgctacaaagaaagttggagttgagcctgggctagtgcccaggctaattggggggtggctccacccctg 21932963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 4843546 - 4843452
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    |||||| ||| || |||||||||||||| || ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  4843546 agtggcggagacaagaattttatagagcttgagcaaaaaatttatcgcaaaacgttacttctttcctgcgaataatttcacatttcctgcggata 4843452  T

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Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 188 - 275
Target Start/End: Original strand, 21932631 - 21932718
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||    
T  21932631 agtggcggagtcaggaattttatagagtctgggcaaaaaatttatcgcaaaatgttacttctttcctgcgaataatttcatatttcct 21932718  T

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Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 290
Target Start/End: Original strand, 42439466 - 42439553
Alignment:
Q  203 aattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttc 290  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| |  || ||||||||||||||||| |||||||||||||||||    
T  42439466 aattttatagggtctgggcaaaaaatttatcgcaaaacgttacttcttttctacgaataatttcacattttctacggatatatctttc 42439553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 300 - 471
Target Start/End: Complemental strand, 19377488 - 19377319
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatgg 399  Q
    |||||||||||||||||||| |||||||||| |||||| | |||||| |||||| || | |||||||||  ||| |||||| |||||    |||||||||    
T  19377488 ctaaatccttggcaaaatctgcaggaaatgtatttccttcggaatttccacaaacatccgcaggtaaatctgcaagaaaagttaaaactactagtaatgg 19377389  T
Q  400 ttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcc 471  Q
     |||  ||| |||||||||||||||||||||| ||||||    ||||| |||||||  ||||||||||||||    
T  19377388 ctggagttgttacaaagaaagttggagctgagcctgggctagtgcccaagctagct--ggggtggctccgcc 19377319  T

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Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 38128877 - 38128979
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttcctgc 294  Q
    ||||||| ||||||||| |  || |||||||| ||||||||||||||||| ||||| |||||  ||||||||||||||||| |  |||||||||||||||    
T  38128877 gagccagaaattttataaaatctaggcaaaaattttatcgcaaaacgttatttccttcctgcagataatttcacatttcctgcacatatatctttcctgc 38128976  T
Q  295 gga 297  Q
    |||    
T  38128977 gga 38128979  T

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Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 19377638 - 19377554
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt 272  Q
    ||||||||||||| ||||| ||||||| |||||||||||| ||||||||||| ||||  || | |||||||||||||||||||||    
T  19377638 agtggcagagccaagaattatatagagtctgggcaaaaaaattatcgcaaaatgttatgtctttcctgcgaataatttcacattt 19377554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 475
Target Start/End: Complemental strand, 30852529 - 30852275
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttcctgc 294  Q
    ||||||| |||||| ||||  ||||| |||||| ||||||||||| ||| |||||| |||||||||||||||||||||||| |||| ||       ||||    
T  30852529 gagccagaaattttttagaatctggggaaaaaaattatcgcaaaatgttgcttccttcctgcgaataatttcacatttcctgcgga-at-------ctgc 30852438  T
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
        |  ||||||| ||||||||||  |||||||||||||||||| |||||||||  |||||||           ||||||||||| |||||  | ||||    
T  30852437 ----aggaaatcctaggcaaaatctgaaggaaatgtgtttcctgcggaatttaca-taaaattc-----------cgcaggaaaagttaaaagttctagt 30852354  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||| || |||| ||||||||||| ||||||||||| ||||||    |||||||||||||  |||||||||| |||||||    
T  30852353 aatggctgagcttactacaaagaaaattggagctgagcctgggctagtgcccaggctagct--ggggtggctctgcccctg 30852275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 38129010 - 38129082
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaa 367  Q
    |||| |||||||||||||||||| | ||||||||||||||||| |||||||||||||||||| | ||||||||    
T  38129010 ggaacctaaatccttggcaaaatatgcaggaaatgtgtttccttcagaatttacacaaaaatccgcaggtaaa 38129082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 41862234 - 41862340
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| |||||||||||||||||||  ||| | |||||||||||||||||||  |||||| |  ||||| ||||||  ||||||||| |||||||| |    
T  41862234 cagtggcggagccaggaattttatagaatctgagtaaaaaatttatcgcaaaacaatacttcatttctgcggataattatacatttcctgcggatatacc 41862333  T
Q  287 tttcctg 293  Q
    |||||||    
T  41862334 tttcctg 41862340  T

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Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 21688208 - 21688152
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaat 356  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  21688208 ctaaatccttcgcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaat 21688152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 4843402 - 4843311
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||| |||||||||||||||||||| || |||||||||||| ||| |||| |||||||| || |  |||||||| || ||||||||||||||    
T  4843402 ggaacctaaatccttggcaaaatctgcatgaaatgtgtttcatgcggaatgtacacaaatatccgtaggtaaatccgaaggaaaagctaaaa 4843311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 19400299 - 19400247
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  19400299 ccagtggcggagccagaaattttatagagcctgggcaaaaagtttatcgcaaa 19400247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 354
Target Start/End: Original strand, 42439591 - 42439650
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaa 354  Q
    |||| |||||||||||||||||||| ||| |||||||||||||||  |||||||||||||    
T  42439591 ggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctgcgaaatttacacaaaa 42439650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 321 - 419
Target Start/End: Complemental strand, 5850805 - 5850707
Alignment:
Q  321 caggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaa 419  Q
    |||||||||||||| ||||||||||||||||| | |   ||| ||||| ||||||||||| |||||  | ||||||||| ||| |||| ||||||||||    
T  5850805 caggaaatgtgttttctgcagaatttacacaacattctgcagataaatccgcaggaaaagttaaaacttctagtaatggctggacttgttacaaagaaa 5850707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 27387165 - 27387215
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaa 237  Q
    ||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  27387165 cagtggcggagccagaaatttcatagagcctgggcaaaaaatttatcgcaa 27387215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 275
Target Start/End: Complemental strand, 21688375 - 21688288
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||||| ||| |||||||||||||||  || ||||||||||||||| ||||| |||||| |    ||| |||||||||||||||||||    
T  21688375 agtggcggagtcaggaattttatagaatctaggcaaaaaatttatcacaaaatgttactgctattctgtgaataatttcacatttcct 21688288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 38575127 - 38575174
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcg 234  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  38575127 cagtggcggagccaggaatttcatagagcctgagcaaaaaatttatcg 38575174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 438
Target Start/End: Original strand, 815002 - 815133
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||| ||||||||||||| || ||||||| ||| |||| ||||||||||||            |||| || ||||||||||||||  | ||||    
T  815002 ggaacctaaattcttggcaaaatctgcaagaaatgtattttctgcggaatttacacaa------------aaatccgtaggaaaagctaaaagttctagt 815089  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggc 438  Q
    ||||| | |  |||||||||||||||||||||||||| ||||||    
T  815090 aatggctagatttgctacaaagaaagttggagctgagcctgggc 815133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 38826022 - 38826074
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| ||||||||||||  |||||| |||||| ||||||||||||||||    
T  38826022 ccagtggcggagccaggaattacatagagtctgggcgaaaaatttatcgcaaa 38826074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 20965994 - 20965955
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaa 225  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  20965994 ccagtggcggagccaggaaatttatagagcctgggcaaaa 20965955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 22937701 - 22937752
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| ||||||||||||  |||||||||| || ||||||||||||||||    
T  22937701 cagtggcggagccaggaattacatagagcctgagcgaaaaatttatcgcaaa 22937752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 45197957 - 45197906
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| ||||||| |||| |||||||  ||||||||||||||||||||||    
T  45197957 cagtggcggagccagaaattctatagagtgtgggcaaaaaatttatcgcaaa 45197906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 23704369 - 23704418
Alignment:
Q  199 caggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttc 248  Q
    ||||||||||||||||  |||  ||||||||||||| |||||||||||||    
T  23704369 caggaattttatagagtttggataaaaaatttatcgtaaaacgttacttc 23704418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 2e-93; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 186 - 472
Target Start/End: Complemental strand, 24965240 - 24964966
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatat 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  ||||||||||||||||||||||| |  ||||||    
T  24965240 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaaccttactttctttctgcgaataatttcacatttcctgcaaatatat 24965141  T
Q  286 ctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaa 385  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||            |||| ||||||||||||||||    
T  24965140 ctttcctgcggaacctaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaatccgcaggaaaagctaaa 24965053  T
Q  386 aaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
    || | ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||||||    
T  24965052 aattctagtaatggttgggcttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctgggtggtggctccgccc 24964966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 188 - 475
Target Start/End: Original strand, 36406378 - 36406686
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataa---------------------tttc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||                     ||||    
T  36406378 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcttgcagataatttc 36406477  T
Q  267 acatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaa 366  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| | ||||||||||||| || | |||||||    
T  36406478 acatttcctacggatatatctttcctgcggaacctcaatccttggcaaaatctgcaggaaatgtgtttcctacggaatttacacaaatatccgcaggtaa 36406577  T
Q  367 attcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggct 466  Q
    || | |||||||||||||||| | |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  36406578 atccacaggaaaagctaaaaattatagtaatgtttgggcttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctggggggtggct 36406677  T
Q  467 ccgcccctg 475  Q
    |||||||||    
T  36406678 ccgcccctg 36406686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 259 - 471
Target Start/End: Original strand, 3384000 - 3384211
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||   |||  |||||||||||||||||||| |    
T  3384000 ataaattcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctacatgaaatacattttttgcagaatttacacaaaaatcc 3384099  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgag 458  Q
     ||||||||| ||||| |||||||||||| | || ||||||| || ||||||||||||||||||||||||||| |||||||||| ||||||||||||| |    
T  3384100 gcaggtaaatccgcagaaaaagctaaaaattctaataatggtaggacttgctacaaagaaagttggagctgagcctgggcactaacccaggctagctg-g 3384198  T
Q  459 gggtggctccgcc 471  Q
     ||||||||||||    
T  3384199 aggtggctccgcc 3384211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 259 - 475
Target Start/End: Complemental strand, 28928194 - 28927990
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctaca-ggaaatgtgtttcctgcagaatttacacaaaaatt 357  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| ||||||||||||         
T  28928194 ataatttcacatttcctacagatatatctttcctgcggaacctaaatccttggcaaaatctgcagggaaatgtgtttcctgcggaatttacacaa----- 28928100  T
Q  358 cacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctga 457  Q
           || | |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||  ||||||     
T  28928099 -------aactccgcaggaaaagctaaaaattctagtaatggttaggcttgctacaaagaaagttggagccgagcctgggcactagcccagaatagctg- 28928008  T
Q  458 ggggtggctccgcccctg 475  Q
    ||||||||||||||||||    
T  28928007 ggggtggctccgcccctg 28927990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 190 - 475
Target Start/End: Original strand, 27321753 - 27322034
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat-atatc-- 286  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| || | ||| || ||      
T  27321753 tggcagagccagaaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattttctgcagataatttcac 27321852  T
Q  287 -tttcctgcggaaact-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaag 380  Q
     | |||||| ||| ||     |||| || |||||||| | ||||||||||||||||||| ||||||||| ||            |||| ||||||||||     
T  27321853 atatcctgcagaatctgcaggaaattctaggcaaaatttgcaggaaatgtgtttcctgcggaatttacataa------------aaatccgcaggaaaaa 27321940  T
Q  381 ctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||  ||||||||||| ||||||||||||||||||| ||||||||||| |||||||   |||||||||||||| ||||||||||||||||||    
T  27321941 ctaaaagttttagtaatggctgggcttgctacaaagaaaattggagctgagcctgggcaagtgcccaggctagctg-ggggtggctccgcccctg 27322034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 295 - 432
Target Start/End: Complemental strand, 13243192 - 13243055
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| | | ||| |||||  ||||||||||||||||  | || |    
T  13243192 ggaacctaaatccttggcaaaatctacaggaaatgtgtttcctgcggaatttacacaaaactccgcagataaatctgcaggaaaagctaaaagttctaat 13243093  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagt 432  Q
    ||||| ||||||||||||||| |||||||||| |||||    
T  13243092 aatggctgggcttgctacaaaaaaagttggaggtgagt 13243055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 295 - 475
Target Start/End: Original strand, 39431679 - 39431859
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| ||||||| |||||||||||| || |||||||||||||| | |||||||||||||| | | ||||||||| |||| ||||||||||||  |  |||    
T  39431679 ggaacctaaatctttggcaaaatctgcacgaaatgtgtttcctacggaatttacacaaaactccgcaggtaaatccgcaagaaaagctaaaagttcaagt 39431778  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||| |  ||| |||||||||||||||||||||||||| | ||||    |||||||||||||| |||||||||| |||||||    
T  39431779 aattgaagggtttgctacaaagaaagttggagctgagcccgggctagtgcccaggctagctggggggtggctctgcccctg 39431859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 38214953 - 38214689
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||| |||||||| | |||||||||||||||||||||||| ||||          
T  38214953 cagtggcggagccagaaattttatagagcttgggcaaaaaaattatcgcaaaatgttacttcattcctgcgaataatttcacatttcctgcgga-----a 38214859  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    ||| |       |  ||||||| | |||||||| ||||||||||||||  ||||||||||||| ||            |||| |||||||||||||||||    
T  38214858 tttgc-------aggaaatcctagacaaaatctgcaggaaatgtgttttatgcagaatttacataa------------aaatccgcaggaaaagctaaaa 38214778  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
      | ||||| ||| ||| ||||||||||||||| ||||||||||| | ||||    |||||||||||||| ||||||||||||||||||    
T  38214777 gttctagtattggctggacttgctacaaagaaaattggagctgagcccgggctagtgcccaggctagctggggggtggctccgcccctg 38214689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 301 - 474
Target Start/End: Original strand, 34282920 - 34283081
Alignment:
Q  301 taaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggt 400  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |            ||| ||||||||||||  | ||||||||      
T  34282920 taaatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacactaaaatcc------------gcaagaaaagctaaaagttctagtaatgac 34283007  T
Q  401 tgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccct 474  Q
    ||| ||||||||||||||||||||||||||| ||||||    |||||||||||||| |||||||||||||||||    
T  34283008 tggacttgctacaaagaaagttggagctgagcctgggctagtgcccaggctagctggggggtggctccgcccct 34283081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 35384256 - 35384341
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  35384256 tggcggagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacggtacttccttcctacgaataatttcacatttcct 35384341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 198 - 275
Target Start/End: Original strand, 34282759 - 34282836
Alignment:
Q  198 ccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  34282759 ccagaaattttatagagcctggacaaaaaatttatcgcacaacgttacttccttcctgcgaataatttcacatttcct 34282836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 28928287 - 28928202
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt 272  Q
    ||||||| ||||||||||||||| |||| ||||| ||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  28928287 cagtggcggagccaggaattttaaagagtctgggtaaaaaatttatcgtaaaaagttacttccttcctgcgaataatttcacattt 28928202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 431
Target Start/End: Original strand, 31500854 - 31500981
Alignment:
Q  301 taaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggt 400  Q
    ||||||||||||||||||   |||||||||||||||||||||||||  ||| |||| | || |||||| | ||| |||||||||||| |||||||||||     
T  31500854 taaatccttggcaaaatccgtaggaaatgtgtttcctgcagaattt--acataaatccgcaagtaaatcctcagaaaaagctaaaaattttagtaatggc 31500951  T
Q  401 tgggcttgctacaaagaaagttggagctgag 431  Q
     | || |||||||||||||||||||||||||    
T  31500952 ggagc-tgctacaaagaaagttggagctgag 31500981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 268
Target Start/End: Original strand, 3383907 - 3383988
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcac 268  Q
    ||||||| ||||||| ||||||||||| | || ||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  3383907 cagtggcggagccagaaattttatagaacatgagcaaaaattttatcgcaaaacgttacttccttcctacgaataatttcac 3383988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 13243345 - 13243273
Alignment:
Q  200 aggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt 272  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||  | | ||| |||||||||||||||    
T  13243345 aggaattttatagagcctgagcaaaaaatttatcgtaaaacgttacttttttcttgccaataatttcacattt 13243273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 331 - 475
Target Start/End: Complemental strand, 8968404 - 8968260
Alignment:
Q  331 gtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctga 430  Q
    ||||||||| |||||||||| || || | ||||||||| ||||| |||||  | |   | ||||||||| ||| |||||||||||| |||| | ||||||    
T  8968404 gtttcctgcggaatttacaccaatatccgcaggtaaatccgcagaaaaagtgataggttctagtaatggctggacttgctacaaaggaagtagaagctga 8968305  T
Q  431 gtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||||    ||| |||||||||| |||||||||||| |||||    
T  8968304 gtctgggctagtgcctaggctagctggggggtggctccgtccctg 8968260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 291
Target Start/End: Original strand, 31500736 - 31500805
Alignment:
Q  222 aaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttcc 291  Q
    ||||||||||| ||||||  ||||||||| | | |||||||||| |||||||||||| ||||||||||||    
T  31500736 aaaaaatttattgcaaaatattacttccttcatacgaataattttacatttcctacgtatatatctttcc 31500805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 475
Target Start/End: Original strand, 21138159 - 21138243
Alignment:
Q  391 tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||||||| ||||||||||||||||||| | ||||||| |||| |    ||| | |||||||| ||||||||||||||||||    
T  21138159 tagtaatggttaggcttgctacaaagaaagtagaagctgagcctggactaatgcctatgctagctggggggtggctccgcccctg 21138243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 17839645 - 17839594
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  17839645 cagtggcggagccaggaattacatagagcctgggcgaaaaatttatcgcaaa 17839594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 21958830 - 21958779
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| |||| |||||||||||||||| |||||||||| |||||||||||    
T  21958830 cagtggcggagctaggaattttatagagcttgggcaaaaagtttatcgcaaa 21958779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 30791349 - 30791399
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaa 237  Q
    |||||||| |||||||||||| ||||||  |||||||||||||||||||||    
T  30791349 cagtggcaaagccaggaatttcatagagtttgggcaaaaaatttatcgcaa 30791399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 5637566 - 5637618
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| ||||||||||||  ||||||| ||||| ||||||||||||||||    
T  5637566 ccagtggcggagccaggaattacatagagcttgggcgaaaaatttatcgcaaa 5637618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 16594863 - 16594824
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaa 225  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  16594863 ccagtggcggagccaggaaatttatagagcctgggcaaaa 16594824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 27047019 - 27046968
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| |||||||||| | ||| ||||| |||||||||||||||||||||    
T  27047019 cagtggcggagccaggaaatatatggagcccgggcaaaaaatttatcgcaaa 27046968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 36409703 - 36409652
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| |||| ||||| ||||||||||| |||| ||||||||||||||||    
T  36409703 cagtggcggagctaggaaatttatagagcccgggcgaaaaatttatcgcaaa 36409652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 546030 - 546000
Alignment:
Q  16 caaaatcacggccaaaatgacaaccaaaaca 46  Q
    |||||||||||||||||||||||||||||||    
T  546030 caaaatcacggccaaaatgacaaccaaaaca 546000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 10014318 - 10014360
Alignment:
Q  196 agccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||| |||| |||||||||||||| ||||||||||||||||    
T  10014318 agccagaaattatatagagcctgggcgaaaaatttatcgcaaa 10014360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 24592196 - 24592234
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaa 225  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  24592196 cagtggcggagccaggaattttatagagcctgagcaaaa 24592234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 8968609 - 8968569
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaa 226  Q
    |||||||| |||| |||||||||||||||||| ||||||||    
T  8968609 ccagtggcggagctaggaattttatagagcctaggcaaaaa 8968569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 218
Target Start/End: Complemental strand, 39532552 - 39532520
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctg 218  Q
    |||||||| ||||||||||||||||||||||||    
T  39532552 ccagtggcggagccaggaattttatagagcctg 39532520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 8e-93; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 188 - 420
Target Start/End: Complemental strand, 10058743 - 10058511
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatct 287  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10058743 agtggcggagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatct 10058644  T
Q  288 ttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaa 387  Q
    ||||||||||| |||||||||||| ||||||| | ||||||||||||||||| |||||||||||||| | | ||||||||| ||| ||||||||||||||    
T  10058643 ttcctgcggaacctaaatccttggtaaaatctgctggaaatgtgtttcctgcggaatttacacaaaattccccaggtaaatccgcgggaaaagctaaaaa 10058544  T
Q  388 atttagtaatggttgggcttgctacaaagaaag 420  Q
     | | ||||||||||||||||||||||||||||    
T  10058543 ttctcgtaatggttgggcttgctacaaagaaag 10058511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 4728786 - 4728477
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt-------------- 272  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||                  
T  4728786 cagtggcggagctaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcaaataatttcacattttctgcagataattt 4728687  T
Q  273 -------cctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
           ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| | ||||||    
T  4728686 cacatttcctacagatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttactcaaaaatccgcaggta 4728587  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggc 465  Q
    ||| |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  4728586 aatccgcaggaaaagctaaaaattctagtaatggtttggcttgctacaaagaaagttggagccgagtctgggcactagcccaagctagctggggggtggc 4728487  T
Q  466 tccgcccctg 475  Q
    ||||||||||    
T  4728486 tccgcccctg 4728477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 190 - 475
Target Start/End: Complemental strand, 31364339 - 31364067
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatcttt 289  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31364339 tggcggagccagaaattttatagagcatgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatcttt 31364240  T
Q  290 cctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaat 389  Q
     |||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||            |||| |||||||||| ||||||  |    
T  31364239 tctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaatccgcaggaaaaactaaaattt 31364152  T
Q  390 ttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
     |||||||||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  31364151 ctagtaatggttggatttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctg-ggggtggctccgcccctg 31364067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 186 - 444
Target Start/End: Complemental strand, 46645832 - 46645553
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct---------- 275  Q
    |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||              
T  46645832 ccagtggcggagccaggaattttatagagtctgggaaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgtatataatt 46645733  T
Q  276 -----------acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggt 364  Q
               ||||||||||||||||||||||| |||||  ||||||||||||| || ||||||||||||||||||||||||||||||||| | |||||    
T  46645732 tcatattttctacggatatatctttcctgcggaacctaaactcttggcaaaatctgcatgaaatgtgtttcctgcagaatttacacaaaaatccgcaggt 46645633  T
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagc 444  Q
    |||| ||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  46645632 aaatccgcagaaaaagctaaaaattctagtaatggttgggcttgctacaaaggaagttggagctgagcctgggcactagc 46645553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 259 - 475
Target Start/End: Complemental strand, 2576307 - 2576091
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaa-tctacaggaaatgtgtttcctgcagaatttacacaaaaatt 357  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||    
T  2576307 ataattttacatttcctacggatatatatttcctgcggaacctacatccttggcaaaaatctgcaggaaatgtgtttcctgcggaatttatacaaaaatt 2576208  T
Q  358 cacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctga 457  Q
    | || |||||||||||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||     
T  2576207 cgcaagtaaattcgcagaaaaagctaaaaattcttgtaatggttgggcttgctacaaagaaagttggagctgagcctgggcactagcccagactagctg- 2576109  T
Q  458 ggggtggctccgcccctg 475  Q
    ||| ||||||||||||||    
T  2576108 gggttggctccgcccctg 2576091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 188 - 476
Target Start/End: Complemental strand, 10715883 - 10715584
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct------------ 275  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||                
T  10715883 agtggcggagccaggtattttatagagcctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 10715784  T
Q  276 ---------acggatatatctttcctgcggaaactaaatccttggcaaaatctacagga-aatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
             ||||||||||||||||||||||| |||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||| |           
T  10715783 acatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcagggcaatgtgtttcctgcggaatttacacaaaaatcc------- 10715691  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgct-acaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
         ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  10715690 -----gcaggaaaagctaaaaattctagtaatggttgggcttgcttacaaagaaagttggagccgagcctgggcactagcccaggctagctggggggtgg 10715596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 188 - 476
Target Start/End: Complemental strand, 10929653 - 10929354
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct------------ 275  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||                
T  10929653 agtggcggagccaggtattttatagagcctgggcaaaaaatttatcgcaaaacattacttccttcctgcgaataatttcacatttcctgcagataatttc 10929554  T
Q  276 ---------acggatatatctttcctgcggaaactaaatccttggcaaaatctacagga-aatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
             ||||||||||||||||||||||| |||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||| |           
T  10929553 acatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcagggcaatgtgtttcctgcggaatttacacaaaaatcc------- 10929461  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgct-acaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
         ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  10929460 -----gcaggaaaagctaaaaattctagtaatggttgggcttgcttacaaagaaagttggagccgagcctgggcactagcccaggctagctggggggtgg 10929366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 4552413 - 4552116
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct----------- 275  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||               
T  4552413 cagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacaaataatttcacatttcctgcagataaatt 4552314  T
Q  276 ----------acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
              ||||||||||||||||||||||| |||||||||||||||||||| ||||||||   |||||||| ||||||||||| |||| |           
T  4552313 cacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacacaaatcc------- 4552221  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggc 465  Q
         ||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||    
T  4552220 -----gcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttggagctgagcctgggcactagcccaggctagctgggggggggc 4552126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 187 - 475
Target Start/End: Original strand, 2017325 - 2017622
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctac--------- 277  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||             
T  2017325 cagtggcggagccaggaattttataaagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctacagataaatt 2017424  T
Q  278 ------------ggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
                ||||||||||||||||||||| |||||| ||||||||||||| | ||||||   |||||||| |||||||||||||||| |           
T  2017425 cacatttcctacggatatatctttcctgcggaacctaaatacttggcaaaatctgcgggaaatacatttcctgcggaatttacacaaaaatcc------- 2017517  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggc 465  Q
         ||||||||||||||||| | |||||||||| | ||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||    
T  2017518 -----gcaggaaaagctaaaaattctagtaatggtagagcttgctacaaagaaagttggagctaagcctgggcactagcccaggctagctggggggtggc 2017612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 195 - 475
Target Start/End: Complemental strand, 40969444 - 40969155
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttca---------------------catttc 273  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||                     ||||||    
T  40969444 gagccagcaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcatattttctgcagataatttcacatttc 40969345  T
Q  274 ctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgca 373  Q
    ||||||||||||||||||||||||| ||||||| ||| |||||||| ||| ||||||||||||||||||||||||||||            |||| ||||    
T  40969344 ctacggatatatctttcctgcggaacctaaatcattgacaaaatctgcagaaaatgtgtttcctgcagaatttacacaa------------aaatccgca 40969257  T
Q  374 ggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccc 473  Q
    |||||||||||||| | |  |||||||||| ||||||||||||||||||| ||||||| ||| |||||||||||||||||||| ||| | ||||||||||    
T  40969256 ggaaaagctaaaaattctcataatggttggacttgctacaaagaaagttgaagctgagcctgagcactagcccaggctagctgggggatagctccgcccc 40969157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 186 - 472
Target Start/End: Complemental strand, 14044553 - 14044279
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatat 285  Q
    |||||||| ||||||| ||||||||||||  ||||||||||| ||||||||||| ||||| |||| |||| ||||||||||||||||||| |||| ||||    
T  14044553 ccagtggcggagccagaaattttatagagtatgggcaaaaaaattatcgcaaaatgttacctccttcctgagaataatttcacatttcctgcgga-atat 14044455  T
Q  286 ctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaa 385  Q
           || | ||    ||||| |||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||||    
T  14044454 -------gcaggaa----atcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaattcgcaggtaaatccgcaggaaaagctaaa 14044366  T
Q  386 aaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
    || ||| ||||||| | ||||||||||||||||| ||||||||||| ||| ||    |||||  ||||||| |||||||||||||||    
T  14044365 aattttcgtaatggcttggcttgctacaaagaaaattggagctgagactgagctagtgcccaaactagctggggggtggctccgccc 14044279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 9003783 - 9003488
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat-atat 285  Q
    ||||||| ||| ||| ||||||||||||||||| ||||||| ||||||||||| |||||||||| | ||||||||||||||||||||||| |||| || |    
T  9003783 cagtggcggagtcagaaattttatagagcctggacaaaaaaattatcgcaaaatgttacttccttcttgcgaataatttcacatttcctatggataattt 9003684  T
Q  286 c---tttcctgcggaaact-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaa 377  Q
    |   |||||||||||| ||     ||||||| |||||||||| ||||||||||||||||||| |||||||||  ||||| | ||||||||| || || ||    
T  9003683 cacatttcctgcggaatctgcaggaaatcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttaca-taaaatccgcaggtaaatccgaagaaa 9003585  T
Q  378 aagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||| |||||  | | ||||||  ||||||||||||||||||| ||||||||||| |||| |    ||| |||||||||| ||||||||| ||||||||    
T  9003584 aagttaaaagttcttgtaatgactgggcttgctacaaagaaaattggagctgagcctggactagtgcctaggctagctg-ggggtggctacgcccctg 9003488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 50384101 - 50383819
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat-atat 285  Q
    ||||||| |||||| ||||||||||||||||||||||||||   || ||||||||||||||||| |||||||||||||| | | ||||| ||||| || |    
T  50384101 cagtggcggagccaagaattttatagagcctgggcaaaaaaaa-attgcaaaacgttacttccttcctgcgaataattttataattcctgcggattattt 50384003  T
Q  286 c---tttcctgcggaaactaaa---tccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaa 379  Q
    |   |||||| ||||  |||||   ||||||||||||||| |||||||||||||||||||| ||||||| |||| || |            |||||||||    
T  50384002 cacatttcctacggatcctaaaatatccttggcaaaatctgcaggaaatgtgtttcctgcaaaatttacgcaaacatcc------------gcaggaaaa 50383915  T
Q  380 gctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    |||||||  | ||||||||| ||||||||||||||||||||||||||||||| ||||||    |||||||||||||| ||||||||||||||||||    
T  50383914 gctaaaagttctagtaatggctgggcttgctacaaagaaagttggagctgagcctgggccagtgcccaggctagctggggggtggctccgcccctg 50383819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 295 - 475
Target Start/End: Complemental strand, 25237675 - 25237495
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | | ||||||||| ||||| ||| |||||||  | ||||    
T  25237675 ggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaattccgcaggtaaatccgcagaaaacgctaaaagttctagt 25237576  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||  ||| ||| ||||||||||||||||||||||| ||||||    || ||||||||||| ||||||||||||||||||    
T  25237575 aatgactggacttactacaaagaaagttggagctgagcctgggctagtgctcaggctagctggggggtggctccgcccctg 25237495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 365 - 476
Target Start/End: Complemental strand, 32005955 - 32005845
Alignment:
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
    |||| |||||||||||||||||| | || ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  32005955 aaatccgcaggaaaagctaaaaattctaataatggtagggcttgctacaaagaaagttggagctgagcctgggcactagcccaggctagctg-ggggtgg 32005857  T
Q  465 ctccgcccctgt 476  Q
    ||||||||||||    
T  32005856 ctccgcccctgt 32005845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 371 - 474
Target Start/End: Complemental strand, 1585744 - 1585642
Alignment:
Q  371 gcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgc 470  Q
    ||||||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||    
T  1585744 gcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttgaagctgagcctgggcactagcccaggctagctg-ggggtggctccgc 1585646  T
Q  471 ccct 474  Q
    ||||    
T  1585645 ccct 1585642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 187 - 282
Target Start/End: Complemental strand, 52373982 - 52373887
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  52373982 cagtggcggagccaggaattttatagagtctgtgcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcggata 52373887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 187 - 438
Target Start/End: Original strand, 11826936 - 11827174
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    |||||||  |||||| ||||||||||||||| ||||||||| |||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||       
T  11826936 cagtggcgaagccagaaattttatagagcctaggcaaaaaaattatcgtaaaatgttacttccttcctgcgaataatttcacatttcctacgga-at--- 11827031  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
        ||||    |  ||||||| ||||||||||||||||||||| ||| ||||  |||||||| ||||||   || |||||| ||||| |||||||||||    
T  11827032 ----ctgc----aggaaatcctaggcaaaatctacaggaaatgtattt-ctgcgaaatttacataaaaatctgcaagtaaatccgcagaaaaagctaaaa 11827122  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggc 438  Q
      | ||||||||| | | ||| ||||||||||| ||||||||||| ||||||    
T  11827123 gttctagtaatggctagacttactacaaagaaaattggagctgagcctgggc 11827174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 195 - 431
Target Start/End: Original strand, 41972338 - 41972578
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat------------- 281  Q
    ||||||||||||||||| |  |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||                 
T  41972338 gagccaggaattttataaaatctggtcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacattttctgcggatcctaaaatcttaa 41972437  T
Q  282 -atat---ctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaa 377  Q
     ||||   ||  |||| |||| || ||||||||||||||||| ||||||||||||||||||| ||||||||||||            |||| ||||||||    
T  41972438 gatattacctcacctg-ggaaccttaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------------aaatccgcaggaa 41972524  T
Q  378 aagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgag 431  Q
    |||||||||  | ||||||||||| |||||||||||||||||||||||||||||    
T  41972525 aagctaaaagttctagtaatggttcggcttgctacaaagaaagttggagctgag 41972578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 2521794 - 2521881
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  2521794 gagccaggaattttatagaacatgggcaaaaaatttatcgtaaaacgttacttccttcctgcgaataatttcacatttcctgcggata 2521881  T

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Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 188 - 475
Target Start/End: Complemental strand, 9694291 - 9694019
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatct 287  Q
    |||||| ||||||| |||||| |||||||||||||||||||| ||||||||| |||| ||||| | |||||||||||| ||||||||| ||||   ||||    
T  9694291 agtggcggagccagaaatttt-tagagcctgggcaaaaaatt-atcgcaaaatgttatttccttcttgcgaataatttgacatttcctgcgga---atct 9694197  T
Q  288 ttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaa 387  Q
         || | ||    ||||| |||||||||| ||||||||||||||||||| ||||||||| |||| | | ||  ||||| ||||| ||||| |||||     
T  9694196 -----gcaggaa----atcctaggcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaattccgcaaataaatccgcagaaaaagttaaaag 9694106  T
Q  388 atttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
     | ||||||||| || |||| ||||||||||| ||||||||||| ||||||    || ||||||||||| | |||| |||||||||||    
T  9694105 ttctagtaatggctgagcttactacaaagaaaattggagctgagcctgggctagtgcacaggctagctg-gaggtgactccgcccctg 9694019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 25237816 - 25237708
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| |||| ||||||| |||||||| ||||||||   |||||| |||||||||||||||| |||||||||||||||||||||||| |||||| |||    
T  25237816 cagtggcggagctaggaattatatagagcatgggcaaattttttatcacaaaacgttacttccttcctgcgaataatttcacatttcctgcggatacatc 25237717  T
Q  287 tttcctgcg 295  Q
    |||||||||    
T  25237716 tttcctgcg 25237708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 32006111 - 32006023
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||| ||| || ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  32006111 cagtggcggagtcatgaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcct 32006023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 295 - 472
Target Start/End: Original strand, 31929048 - 31929224
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||||||||||||||| | ||||||||||||||| |||||||||||||  ||||| | ||  ||||| |||||||||||| |   | | ||||    
T  31929048 ggaacctaaatccttggcaaaatttgcaggaaatgtgtttcttgcagaatttacaataaaatccgcaaataaatccgcaggaaaagcgagggattctagt 31929147  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
    |||| ||||||||||||||||||||||   |||| ||||| |||    |||||||||||||| ||||||| |||||||    
T  31929148 aatgattgggcttgctacaaagaaagtaaaagctaagtcttggctagcgcccaggctagctg-ggggtggttccgccc 31929224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 190 - 275
Target Start/End: Original strand, 43003075 - 43003160
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||| ||||||| |||||||||||| |||| |||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||    
T  43003075 tggcggagccagaaattttatagagtctggacaaaaaatttattgcagaacgttacttctttcctgcgaataatttcacatttcct 43003160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 386
Target Start/End: Original strand, 2521948 - 2522038
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||| |||||||||||  ||||||||||||||||||||||||||| || ||||||||||||| | |||||||| || |||||||||||||||    
T  2521948 ggaacctaaatccttgataaaatctacaggaaatgtgtttcctgcggactttacacaaaaatccgcaggtaaa-tcccaggaaaagctaaaa 2522038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 371 - 477
Target Start/End: Complemental strand, 32828250 - 32828144
Alignment:
Q  371 gcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgc 470  Q
    ||||||||||||||||  | |||||||||||||| || ||||||||||| ||||||||||| ||||||    |||||||||||||| ||  |||||||||    
T  32828250 gcaggaaaagctaaaagttctagtaatggttgggattactacaaagaaaattggagctgagcctgggctagtgcccaggctagctggggtttggctccgc 32828151  T
Q  471 ccctgtg 477  Q
    |||||||    
T  32828150 ccctgtg 32828144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 362 - 475
Target Start/End: Original strand, 15034545 - 15034658
Alignment:
Q  362 ggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgagggg 461  Q
    |||||||  ||||||||||| ||||  | |||||||||||||||||| |||||||||||||| |||||||  |||||    ||||||||||| || ||||    
T  15034545 ggtaaatctgcaggaaaagcgaaaagttctagtaatggttgggcttgttacaaagaaagttgaagctgagcttgggctagtgcccaggctagttgggggg 15034644  T
Q  462 tggctccgcccctg 475  Q
    ||||||||||||||    
T  15034645 tggctccgcccctg 15034658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 282
Target Start/End: Complemental strand, 50100068 - 50100003
Alignment:
Q  217 tgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  50100068 tgggtaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcggata 50100003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 190 - 280
Target Start/End: Complemental strand, 32828368 - 32828278
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacgga 280  Q
    |||| ||||||| |||||||||| |||||||||||||| ||||| |||||  ||||||||| ||||| |||||||| ||||||||| ||||    
T  32828368 tggcggagccagaaattttatagggcctgggcaaaaaaattatcacaaaatattacttccttcctgcaaataattttacatttcctgcgga 32828278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 8901897 - 8901841
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaat 356  Q
    |||||||||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  8901897 ctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggagtttacacaaaaat 8901841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 2576400 - 2576329
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcga 258  Q
    ||||||| |||||| |||||||||| || |||||||||||| ||||||||||||||||||||||  ||||||    
T  2576400 cagtggcggagccaagaattttataaagtctgggcaaaaaaattatcgcaaaacgttacttcctttctgcga 2576329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 36947617 - 36947544
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaat 368  Q
    |||| |||||| ||||||||||||  |||||||| |||||||||||||||||| |||||||| | |||||||||    
T  36947617 ggaacctaaattcttggcaaaatccgcaggaaatatgtttcctgcagaatttatacaaaaatccgcaggtaaat 36947544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 49745138 - 49745077
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaat 356  Q
    |||| |||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||    
T  49745138 ggaacctaaatccttggcaaaatctgcagaaaatgtgtttcctacggaatttacacaaaaat 49745077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 25182734 - 25182785
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25182734 cagtagcagagccaggaattttatagagcctaggcaaaaaaattatcgcaaa 25182785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 49745263 - 49745199
Alignment:
Q  208 tatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt 272  Q
    ||||||| ||||| ||||||||||||| |||| ||||| |||| |||||||||||||| ||||||    
T  49745263 tatagagtctggggaaaaaatttatcgtaaaatgttacgtccttcctgcgaataattttacattt 49745199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 42844026 - 42843980
Alignment:
Q  189 gtggcagagccaggaattttatagagcctgggcaaaaaatttatcgc 235  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||    
T  42844026 gtggcggagccaggaattctatagagcctgggcgaaaaatttatcgc 42843980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 8901814 - 8901734
Alignment:
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctgt 476  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||    |||||| | ||||| | |||||||||||||||||    
T  8901814 aatggctgggctttctacaaagaaagttggagctgagcctgggctagtgcccagacaagctg-gcggtggctccgcccctgt 8901734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 475
Target Start/End: Complemental strand, 6017131 - 6017047
Alignment:
Q  391 tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||| || |||||||||||||||||||| | || |||| ||||||    ||||| |||||||  ||||||||||||||||||    
T  6017131 tagtaatagtcgggcttgctacaaagaaagtagaagttgagcctgggctagtgcccatgctagctagggggtggctccgcccctg 6017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 12211084 - 12211136
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| |||||| |||||||| ||||  ||||||||||||||||||||||    
T  12211084 ccagtggcggagccatgaattttacagagtttgggcaaaaaatttatcgcaaa 12211136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 475
Target Start/End: Complemental strand, 52373753 - 52373670
Alignment:
Q  391 tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||||  || |||| ||| ||||||||||||||||||| ||||||    |||||| ||||||| ||||||||||||||||||    
T  52373753 tagtaatgactgagcttactataaagaaagttggagctgagcctgggctagtgcccagactagctg-ggggtggctccgcccctg 52373670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 1585864 - 1585809
Alignment:
Q  220 gcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||||||| ||||||||||||||| ||| || | | ||||||||||||||||||||    
T  1585864 gcaaaaaaattatcgcaaaacgttgctttcttcgtacgaataatttcacatttcct 1585809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 5516933 - 5516984
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| |||||||||| |  ||||||||||||| ||||||||||||||||    
T  5516933 cagtggcggagccaggaactacatagagcctgggcgaaaaatttatcgcaaa 5516984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 26438240 - 26438287
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcg 234  Q
    ||||||| |||||||||| ||||| |||||||||||||||||| ||||    
T  26438240 cagtggcggagccaggaaatttatggagcctgggcaaaaaattaatcg 26438287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 37236117 - 37236168
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| ||||||| ||||  ||||||||||||| ||||||||||||||||    
T  37236117 cagtggcggagccagaaattacatagagcctgggcgaaaaatttatcgcaaa 37236168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 49908216 - 49908267
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| || |||||||||  ||||||||||||| ||||||||||||||||    
T  49908216 cagtggcggaaccaggaattacatagagcctgggcgaaaaatttatcgcaaa 49908267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 17555519 - 17555461
Alignment:
Q  180 gtgactccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||| ||||||||| ||||||| ||||  |||||||||| || ||||||||||||||||    
T  17555519 gtgagtccagtggcggagccagaaattacatagagcctgagcgaaaaatttatcgcaaa 17555461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 24974532 - 24974570
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaa 225  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  24974532 cagtggcggagccaggaaatttatagagcctgggcaaaa 24974570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 48131184 - 48131134
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||| |||||||||| ||||| ||| |||||||||||| ||||||||||    
T  48131184 agtggcggagccaggaaatttatggagtctgggcaaaaaaattatcgcaaa 48131134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 10351871 - 10351920
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaa 237  Q
    |||||| |||||||||| ||||| ||||| |||| |||||||||||||||    
T  10351871 agtggcggagccaggaaatttatggagcccgggcgaaaaatttatcgcaa 10351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 12679709 - 12679762
Alignment:
Q  185 tccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||||| ||||||||||||  ||||||| ||||  ||||||||||||||||    
T  12679709 tccagtggcggagccaggaattacatagagcttgggtgaaaaatttatcgcaaa 12679762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Complemental strand, 50099881 - 50099820
Alignment:
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggag 426  Q
    |||| ||||| |||||||||||  | ||||||||||||  ||| ||||||||||||||||||    
T  50099881 aaatccgcagaaaaagctaaaagctctagtaatggttgaacttactacaaagaaagttggag 50099820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 43142562 - 43142614
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| |||||||||| ||||| ||||| |||| ||||||||||| ||||    
T  43142562 ccagtggcggagccaggaaatttatggagcccgggcgaaaaatttatcccaaa 43142614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 55464518 - 55464566
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgca 236  Q
    |||||| |||||| |||||||||| |||||| ||||| |||||||||||    
T  55464518 agtggcggagccatgaattttatatagcctgagcaaacaatttatcgca 55464566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 5e-91; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 189 - 475
Target Start/End: Original strand, 1780933 - 1781207
Alignment:
Q  189 gtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctt 288  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1780933 gtggcagagccaggaattttatagagtctgggcataaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctacggatatatctt 1781032  T
Q  289 tcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaa 388  Q
    |  ||||||| |||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||            |||||||||||||||      
T  1781033 ttatgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgaggaatttacacaaaaatcca------------caggaaaagctaaaatt 1781120  T
Q  389 tttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    | |||||||||||||| |||||||||||||||||||||| ||  |||||||||||||||| ||||||| ||||||||||||||||||    
T  1781121 tatagtaatggttgggtttgctacaaagaaagttggagccgaacctgggcactagcccagactagctggggggtggctccgcccctg 1781207  T

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Target: chr6; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 195 - 475
Target Start/End: Complemental strand, 9696275 - 9695975
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct------------------- 275  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||                       
T  9696275 gagccagaaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcagataatttcacatttc 9696176  T
Q  276 --acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgca 373  Q
      ||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||   ||||||||| ||||    
T  9696175 ctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatatgtttcctgcggaatttacacaaaaatctgcaggtaaatccgca 9696076  T
Q  374 ggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccc 473  Q
    |||||| ||||||| | || ||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| |||||||||    
T  9696075 ggaaaatctaaaaattctaataatgattgggcttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctg-ggggtgactccgcccc 9695977  T
Q  474 tg 475  Q
    ||    
T  9695976 tg 9695975  T

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Target: chr6; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 188 - 475
Target Start/End: Original strand, 10397698 - 10397977
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata-tatc 286  Q
    |||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | ||    
T  10397698 agtggcggaaccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttccaacagataatttc 10397797  T
Q  287 ---tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagcta 383  Q
       |||||| ||||| |||||||||||||||||| | ||||||||||||||||||| |||||||||||| ||| |            |||||||||||||    
T  10397798 acatttcctacggaacctaaatccttggcaaaatatgcaggaaatgtgtttcctgcggaatttacacaacaatcc------------gcaggaaaagcta 10397885  T
Q  384 aaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    |||| | | |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  10397886 aaaattctcgtaatggttgggtttgctacaaagaaagttggagctgagcctgggcactagcccaggctagctggggggtggctccgcccctg 10397977  T

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Target: chr6; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 259 - 475
Target Start/End: Original strand, 9046896 - 9047111
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    ||||||||||||||||||| ||||||| |||| ||||||| ||||||||||| |||||||| ||||||||||||||||||| |||| |||||||||||      
T  9046896 ataatttcacatttcctacagatatatatttcttgcggaacctaaatccttgacaaaatctgcaggaaatgtgtttcctgcggaatctacacaaaaatct 9046995  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgag 458  Q
    |||||||||| |||||||||||||||||| | ||||||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||||||| |    
T  9046996 acaggtaaatccgcaggaaaagctaaaaattctagtaatggttggacttactacaaagaaagttgaagctgagtctggacactagcccaggctagctg-g 9047094  T
Q  459 gggtggctccgcccctg 475  Q
    |||||||||||||||||    
T  9047095 gggtggctccgcccctg 9047111  T

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Target: chr6; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 185 - 472
Target Start/End: Original strand, 34248899 - 34249195
Alignment:
Q  185 tccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct--------- 275  Q
    ||||||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||             
T  34248899 tccagtggtggagtcaagaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctgcggataatttcacatttcctgcagataat 34248998  T
Q  276 ------------acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacagg 363  Q
                |||||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |         
T  34248999 ttcatattttctacggatatatctttcctgtggaacctaaacccttggcaaaatctgcaggaaatgtgtttcctgcagaatttacacaaaaatcc----- 34249093  T
Q  364 taaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtg 463  Q
           ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  34249094 -------gcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttggagttgagtctgggcactagcccaagctagctggggggtg 34249186  T

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Target: chr6; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 196 - 475
Target Start/End: Original strand, 23663656 - 23663944
Alignment:
Q  196 agccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct-------------------- 275  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||||||||||||||||                        
T  23663656 agccaggaattttatagagcctggataaaaaatttatcgcaaaacgttacttcattcctgcgaataatttcacatttcctgcagataatttcacattttc 23663755  T
Q  276 -acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcag 374  Q
     ||||||||||||||| | |||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| |            ||||    
T  23663756 tacggatatatctttcttacggaacataaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatcc------------gcag 23663843  T
Q  375 gaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccct 474  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||    
T  23663844 gaaaagctaaaaattatagcaatggttgggcttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctggggggtggctcctcccct 23663943  T

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Target: chr6; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 259 - 426
Target Start/End: Complemental strand, 15529081 - 15528914
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||   |||||||| ||||||||||||| || |    
T  15529081 ataaattcacatttcctacagatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatacatttcctgcggaatttacacaaacatcc 15528982  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggag 426  Q
     ||||||||| |||||||||||||||||| | || ||||||| |||||||||||||||||||||||||    
T  15528981 gcaggtaaatccgcaggaaaagctaaaaattctaataatggtagggcttgctacaaagaaagttggag 15528914  T

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Target: chr6; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 195 - 387
Target Start/End: Complemental strand, 2941442 - 2941229
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct------------------- 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||                       
T  2941442 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataatttcacatttc 2941343  T
Q  276 --acggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgca 373  Q
      ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||| | ||||||||| ||||    
T  2941342 ctacggatatatctttcatgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcgaaatttacactaaaatccgcaggtaaatccgca 2941243  T
Q  374 ggaaaagctaaaaa 387  Q
    ||||||| ||||||    
T  2941242 ggaaaagataaaaa 2941229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 187 - 426
Target Start/End: Complemental strand, 15122271 - 15122011
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt-------------- 272  Q
    ||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||                  
T  15122271 cagtggcggagtcaggaattttatagagtttgggcaaaaaatttatcgcaaaacgttactttctttctgcgaataatttcacattttctgcagataattt 15122172  T
Q  273 -------cctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
           ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| | ||||||    
T  15122171 tacatttcctacggatatatctttcctgcggaacgtaaatccttggcaaaatctgcaggaaatgtgtttcctgcagaatttagacacaaatccgcaggta 15122072  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggag 426  Q
    ||| ||||| |||||||||||| | || ||||| | ||| || ||||||||||| ||||||    
T  15122071 aatccgcagaaaaagctaaaaattctaataatgatagggttttctacaaagaaaattggag 15122011  T

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Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 31188208 - 31188295
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  31188208 gagccatgaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgtgaataatttcacattttctacggata 31188295  T

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Target: chr6; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 295 - 428
Target Start/End: Original strand, 2836217 - 2836350
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| ||||||||||| |||||||| |||||||||| |||||||| |||||||||| ||||| | ||| | ||| ||||| |||||||||||  | |||     
T  2836217 ggaacctaaatccttgacaaaatctgcaggaaatgtatttcctgcggaatttacacgaaaatccgcagatcaatccgcagaaaaagctaaaagttctagg 2836316  T
Q  395 aatggttgggcttgctacaaagaaagttggagct 428  Q
    |||||||||| |||||||||||||||||||||||    
T  2836317 aatggttgggtttgctacaaagaaagttggagct 2836350  T

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Target: chr6; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 339568 - 339472
Alignment:
Q  185 tccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat 281  Q
    ||||||||| |||| || ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||| | |||||||||||||||| |||||    
T  339568 tccagtggcggagctagaaattttatagagcttgggcaaaaaatttatcgcaaaatgttacttccttcctgcaattaatttcacatttcctgcggat 339472  T

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Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 191 - 275
Target Start/End: Original strand, 2836059 - 2836143
Alignment:
Q  191 ggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||||| ||||||||||||||||| ||| |||||||||||||  ||| |||||||||||| ||||||||||||||||||||||||    
T  2836059 ggcagatccaggaattttatagagtctgagcaaaaaatttattacaagacgttacttccttcctgcgaataatttcacatttcct 2836143  T

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Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 31200052 - 31200140
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgc-aaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    |||||| |||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| | |||||||    
T  31200052 gagccatgaattttatagagcatgggcaaaaaaattatcgctaaaacgttacttccttcctgcgaataatttcacattttccacggata 31200140  T

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Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 282
Target Start/End: Complemental strand, 2960899 - 2960805
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    |||||| ||||||| |||||||||||||||| || ||||| |||| |||||| |||||||||| | |||||||||||||||||||||| ||||||    
T  2960899 agtggcggagccagaaattttatagagcctgagcgaaaaaattattgcaaaatgttacttccttcttgcgaataatttcacatttcctgcggata 2960805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 341 - 475
Target Start/End: Complemental strand, 34188855 - 34188721
Alignment:
Q  341 gaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcac 440  Q
    ||||||| ||||| ||||  |||||||| ||||||||||| | |||  | ||||||||| ||||||||||||||||||||||||||||||| || |||      
T  34188855 gaatttatacaaacattcgtaggtaaatccgcaggaaaagttgaaagttctagtaatggctgggcttgctacaaagaaagttggagctgagcctcggcta 34188756  T
Q  441 tagcccaggctagctgaggggtggctccgcccctg 475  Q
      |||||||||||||| | |||| |||||||||||    
T  34188755 gtgcccaggctagctgggaggtgactccgcccctg 34188721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 295 - 472
Target Start/End: Complemental strand, 339434 - 339271
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||||||||| ||||||| |||||||||| |||||| | |||||||||||||||| ||||||            |||||||||||  ||||||    
T  339434 ggaacctaaatccttggtaaaatctgcaggaaatgtatttcctacggaatttacacaaaaatccacagg------------aaaagctaaaagttttagt 339347  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
    ||||| || | ||||||||||||||||| ||||||| |||||||    |||||||||||||  |||||||||||||||    
T  339346 aatggctgagtttgctacaaagaaagttagagctgaatctgggctaatgcccaggctagct--ggggtggctccgccc 339271  T

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Target: chr6; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 28614308 - 28614377
Alignment:
Q  203 aattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt 272  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  28614308 aattttatagagcctgtgcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacattt 28614377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 356
Target Start/End: Original strand, 14938826 - 14938988
Alignment:
Q  203 aattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggat-atatc---tttcctgcggaa 298  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||| || |||| ||||||||||||||||||| | ||| || ||   |||||| | |||    
T  14938826 aattttatagagcttgggcaaaaaaattatcgcaaaatgttactttcttcctgggaataatttcacatttcctgcagataatttcacatttcctacagaa 14938925  T
Q  299 act-----aaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaat 356  Q
     ||     |||||||  ||||||||| ||||||||||||||||||| ||||||||| ||||||    
T  14938926 tctgcaggaaatcctaagcaaaatctgcaggaaatgtgtttcctgcggaatttacataaaaat 14938988  T

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Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 282
Target Start/End: Complemental strand, 34189023 - 34188931
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggata 282  Q
    |||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||| ||   | |||||||||||||||||||||| ||||||    
T  34189023 tggcggagccaggaattttctagagcctgagcaaaaaatttgtcgcaaaacgttacctctctcttgcgaataatttcacatttcctgcggata 34188931  T

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Target: chr6; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 475
Target Start/End: Original strand, 28614434 - 28614568
Alignment:
Q  341 gaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcac 440  Q
    ||||||||| |||||| | ||||||||| || |||||||| |||||  | ||||||||| | ||||||||||||||| | ||||||||||| ||||||      
T  28614434 gaatttacataaaaatccgcaggtaaatccgtaggaaaagttaaaagttctagtaatggctaggcttgctacaaagataattggagctgagcctgggcta 28614533  T
Q  441 tagcccaggctagctgaggggtggctccgcccctg 475  Q
      ||||| |||||||| ||||||||||| ||||||    
T  28614534 gtgcccacgctagctggggggtggctccacccctg 28614568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 15529172 - 15529113
Alignment:
Q  189 gtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttc 248  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  15529172 gtggcggagtcaggaattttatagagcctaggcaaaaaatttatcgcaaaacattacttc 15529113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 21148896 - 21148947
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  21148896 cagtggcagagccaggaattacatagagcctgggcgaaaaatttatcgcaaa 21148947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 438
Target Start/End: Complemental strand, 2960720 - 2960652
Alignment:
Q  370 cgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggc 438  Q
    |||||||||||||||||  | ||||| ||| ||| ||||||||||||||| ||||||||||| ||||||    
T  2960720 cgcaggaaaagctaaaagttctagtattggctggacttgctacaaagaaaattggagctgagcctgggc 2960652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 9046811 - 9046866
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcct 250  Q
    ||||||| ||||||||||||  |||||||||||||||||| ||||||||| |||||    
T  9046811 gagccagaaattttatagagtttgggcaaaaaatttatcggaaaacgttatttcct 9046866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 472
Target Start/End: Original strand, 14939011 - 14939092
Alignment:
Q  391 tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
    ||||||||| | || |||||||||||||| ||||||||||| ||| ||    | |||||||||||| |||||||||||||||    
T  14939011 tagtaatggctaggtttgctacaaagaaaattggagctgagcctgagctagtgtccaggctagctggggggtggctccgccc 14939092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 475
Target Start/End: Complemental strand, 5582490 - 5582407
Alignment:
Q  391 tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||| | || |||||||||||||||||| | || |||| ||||||    |||||||||||||| ||||||||||||||||||    
T  5582490 tagtaatagctgtgcttgctacaaagaaagtagaagttgagcctgggctagtgcccaggctagctg-ggggtggctccgcccctg 5582407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 25558456 - 25558496
Alignment:
Q  185 tccagtggcagagccaggaattttatagagcctgggcaaaa 225  Q
    ||||||||| |||||||||| |||||||| |||||||||||    
T  25558456 tccagtggcggagccaggaaatttatagaacctgggcaaaa 25558496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 1e-85; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 187 - 476
Target Start/End: Original strand, 22572609 - 22572885
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| | |||||||    
T  22572609 cagtggcggagccaggaattttataaagcctggacaaaaaatttatcgcaaaacgttactttcttcctgcgaataatttcacatttcctatgaatatatc 22572708  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||| ||||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||||||            |||||||||||||||||||||     
T  22572709 tttcttgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctggggaatttacacaa------------aaattcgcaggaaaagctaaat 22572796  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctgt 476  Q
    | | ||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||||||||||||| ||||    
T  22572797 attctagtaatggttaggcttgctacaaagaaagttggagctgagcctggacactagcccaggctagccg-ggggtggctccgccgctgt 22572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 13203995 - 13203698
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt-------------- 272  Q
    ||||||| ||||||||||||||||||||| || |||||||||||||||||||| |||||||||| || ||||||||||||||||||                  
T  13203995 cagtggcggagccaggaattttatagagcatgagcaaaaaatttatcgcaaaatgttacttccttccagcgaataatttcacattttccgcagataattt 13203896  T
Q  273 -------cctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
           ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||| |           
T  13203895 cacatttcctacggatatctctttcctgcggaacctaaatccttggcaaaatctgcaggaaacgtgtttcctgcggaatttacacaaaaatcc------- 13203803  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggc 465  Q
         ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  13203802 -----gcaggaaaagctaaaaattctagtaatggttgggcttgctacaaagaaagttggagctgagcctgggcactagcccaggctagctggggggtggc 13203708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 195 - 475
Target Start/End: Original strand, 41114765 - 41115054
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataa---------------------tttcacatttc 273  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||                     |||||||||||    
T  41114765 gagccaggaattttatagagcttgggcaaaaaatttatcgcaaaacgttacttccttcatgcgaataatttcacatttcctgcagataatttcacatttc 41114864  T
Q  274 ctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgca 373  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||            | |||| ||||    
T  41114865 ctacggatatatctttcttgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacac------------gaaaatccgca 41114952  T
Q  374 ggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccc 473  Q
    |||||| ||||||| | |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||    
T  41114953 ggaaaaactaaaaattctagtaatggttgagcttgctacaaagaaagttggagccgagcctgggcactagcccaggctagctgggggatggctccgcccc 41115052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 2476034 - 2475753
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| || |||||||    
T  2476034 cagtggcagagtcaggaattttatagagcctgggcaaaaaaattatcgcaaaacgttacttccttcctgcgaataatttcacatttcctgcgaatatatc 2475935  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttc-----ctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagc 381  Q
    |||||||||||| ||| ||| |||||||||||| || |||||| |||||      ||| ||||||||||||            |||| |||| || ||||    
T  2475934 tttcctgcggaacctatatcattggcaaaatctgcaagaaatgagtttcatgttgtgcggaatttacacaa------------aaatccgcaagacaagc 2475847  T
Q  382 taaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    |||||  | ||||||||| ||||||| |||||||||||||||||||||||||||| |    |||||  ||||||| |||||||||||| |||||    
T  2475846 taaaagttctagtaatggctgggcttcctacaaagaaagttggagctgagtctggactagtgcccaaactagctggggggtggctccgtccctg 2475753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 259 - 448
Target Start/End: Original strand, 6799866 - 6800043
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||          
T  6799866 ataatttcacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------ 6799959  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccag 448  Q
          |||| ||||||||||| |||||| | |||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  6799960 ------aaatccgcaggaaaagttaaaaattctagtaatggttgagcttgctacaaagaaagttggagccgagcctgggcactagcccag 6800043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 187 - 431
Target Start/End: Complemental strand, 29257594 - 29257341
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatt--------------- 271  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||                   
T  29257594 cagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgcagataagtt 29257495  T
Q  272 ------tcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
          |||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||  |||||||||||            |    
T  29257494 cacatttcctacggatatatctttcctgcggaacgtaaattcttggcaaaatctgcaggaaatgtgtttcctgcgaaatttacacaa------------a 29257407  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgag 431  Q
    ||| || |||||||| |||||| |||| ||||| |||||||| |||||||||||||||||||||||    
T  29257406 aatccgaaggaaaaggtaaaaattttaataatgattgggctttctacaaagaaagttggagctgag 29257341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 259 - 431
Target Start/End: Original strand, 18299123 - 18299283
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||          
T  18299123 ataatttcacatttcctacagatatatctttcttgcggaacctaaatccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaa------ 18299216  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgag 431  Q
          |||| |||| |||||| |||||| | |||||||||||||||||||||||||||||||||||| ||||    
T  18299217 ------aaatccgcaagaaaagttaaaaattctagtaatggttgggcttgctacaaagaaagttggaggtgag 18299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 295 - 438
Target Start/End: Complemental strand, 25563034 - 25562891
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||||||||||||||||| |||||||||| |||||||| ||||||||| || ||| | ||| ||||| |||||||||||||||||  | ||||    
T  25563034 ggaacctaaatccttggcaaaatctgcaggaaatgtatttcctgcggaatttacaaaacaatccgcagataaatccgcaggaaaagctaaaagttctagt 25562935  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggc 438  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  25562934 aatggttgggcttgctacaaagaaagttggagctgagcctgggc 25562891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 187 - 289
Target Start/End: Complemental strand, 17249558 - 17249456
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| ||| |||||||||||||||| |||||||||| |||||| |||||||||||||| || |||||||||||||||||||||||| ||||||||||    
T  17249558 cagtggcggagtcaggaattttatagagtctgggcaaaatatttatagcaaaacgttactttcttcctgcgaataatttcacatttcctgcggatatatc 17249459  T
Q  287 ttt 289  Q
    |||    
T  17249458 ttt 17249456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 303979 - 304067
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||| ||||||| ||||||||||||  ||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||    
T  303979 cagtggcggagccagaaattttatagagtttgggcaaaaaaattatcgcaaaacgttacttcttatctgcgaataatttcacatttcct 304067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 187 - 275
Target Start/End: Complemental strand, 17149024 - 17148936
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||| |||| || |||||||| |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  17149024 cagtggcggagctagaaattttattgagcttgggcaaaaaatttatctcaaaacgttacttccttcctgcgaataatttcacatttcct 17148936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 41010732 - 41010652
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||| |||||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41010732 gagctaggaattttatagagtgtggacaaaaaatttatcgcaaaacgttacttccttcctgcgaataatttcacatttcct 41010652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 275
Target Start/End: Original strand, 6799773 - 6799861
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||| |||| |||||||||||||||||||||||||   |||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  6799773 cagtggcggagctaggaattttatagagcctgggcaaattttttatcacaaaacgttagttccttcctgcgaataatttcacatttcct 6799861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 475
Target Start/End: Complemental strand, 34756790 - 34756610
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| ||||||||||||||||||| |||||||| ||| ||||| | |||||||||| |||||   ||||||||| |||||||||||  | |   | ||||    
T  34756790 ggaacctaaatccttggcaaaatccacaggaaacgtgattcctacggaatttacaccaaaatctgcaggtaaatccgcaggaaaagtgagaggttctagt 34756691  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    || ||  || ||||||||||||||||| | ||||||| ||||||    |||||||||||||| |||||||||||| |||||    
T  34756690 aacggccggacttgctacaaagaaagtagaagctgagcctgggctagtgcccaggctagctggggggtggctccgtccctg 34756610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 365 - 475
Target Start/End: Original strand, 33909416 - 33909525
Alignment:
Q  365 aaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
    ||||||||||||||| ||||||| | ||||||||  || ||||||||||||||||||||||||| |||||||||    ||||||| ||||||| ||||||    
T  33909416 aaattcgcaggaaaaactaaaaattctagtaatgactgagcttgctacaaagaaagttggagctaagtctgggctagtgcccaggttagctga-gggtgg 33909514  T
Q  465 ctccgcccctg 475  Q
    |||||||||||    
T  33909515 ctccgcccctg 33909525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 12000785 - 12000700
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt 272  Q
    ||||||| |||||||||||| |||||||||| ||||||||| ||||||||||| ||||| |||| |||||||||||||| ||||||    
T  12000785 cagtggcggagccaggaattatatagagcctaggcaaaaaaattatcgcaaaatgttacgtccttcctgcgaataattttacattt 12000700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 190 - 294
Target Start/End: Original strand, 16220919 - 16221023
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatcttt 289  Q
    |||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||  ||||  |||||| ||||||| ||  ||||||| ||||    
T  16220919 tggcggagccagaaattttatagagcctgggcaaaaaaattatcgcaaaacgttatttcctttctgcatataattgcacattttctgtggatataccttt 16221018  T
Q  290 cctgc 294  Q
    |||||    
T  16221019 cctgc 16221023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 45444340 - 45444444
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaa-aatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatat 285  Q
    ||||||||||| ||| ||||| |||||| |||| ||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||   |||||||    
T  45444340 cagtggcagagtcagaaatttcatagagtctggacaaaaaaatttattgcaaaacattacttccttcctgcgaataatttcacatttcctgtagatatat 45444439  T
Q  286 ctttc 290  Q
    |||||    
T  45444440 ctttc 45444444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 18299060 - 18299118
Alignment:
Q  217 tgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  18299060 tgggcaaaaaatttatcgtaaaacgttacttccttcctgcgaataatttcacatttcct 18299118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 475
Target Start/End: Original strand, 304202 - 304307
Alignment:
Q  370 cgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccg 469  Q
    |||||||||||||||||  | ||||||||| || ||||||||||||||||||||||||||||  |||||    ||||| |||||||| |||||||| |||    
T  304202 cgcaggaaaagctaaaagttctagtaatggctgagcttgctacaaagaaagttggagctgagcttgggctagtgcccaagctagctggggggtggcaccg 304301  T
Q  470 cccctg 475  Q
    ||||||    
T  304302 cccctg 304307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 15651468 - 15651384
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacattt 272  Q
    |||||||||||||| ||||| |||||||||| |||||||| |||||||||||| ||||| |||| |||||||||||||| ||||||    
T  15651468 cagtggcagagccaagaattatatagagcctcggcaaaaa-tttatcgcaaaatgttacgtccttcctgcgaataattttacattt 15651384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 363
Target Start/End: Complemental strand, 17249412 - 17249349
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacagg 363  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||||    
T  17249412 ctaaatccttggcaaaatctacaagaaatgtgtttcctgtggaatttacacaaaaatccacagg 17249349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 17148879 - 17148808
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaa 367  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||    
T  17148879 ggaacctaaatccttg-caaaatctgcaggaaatgtgtttcctgcggaatttacacaaaaatccgcaggtaaa 17148808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 33909250 - 33909322
Alignment:
Q  203 aattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    |||||||||||| ||||||||||| |||||||||||| ||||| |||| | ||| ||||||||||||||||||    
T  33909250 aattttatagagtctgggcaaaaactttatcgcaaaatgttacatccttcatgcaaataatttcacatttcct 33909322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 354
Target Start/End: Complemental strand, 12000613 - 12000563
Alignment:
Q  304 atccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaa 354  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  12000613 atccttggcaaaatctgcaggaaatgtgtttcctgcggaatttacacaaaa 12000563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 356
Target Start/End: Complemental strand, 41010574 - 41010513
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaat 356  Q
    |||| |||||||||| | ||||||| ||||||||||||||||||||||||||| ||||||||    
T  41010574 ggaacctaaatccttagtaaaatctgcaggaaatgtgtttcctgcagaatttatacaaaaat 41010513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 25563192 - 25563112
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||||||||||||||||||| |||| ||    |||||||||||||||||||||||  |||| |||||||||| |||||||    
T  25563192 gagccaggaattttatagagcttgggaaatttttttatcgcaaaacgttacttcctttctgcaaataatttcatatttcct 25563112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 300 - 354
Target Start/End: Complemental strand, 15651301 - 15651247
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaa 354  Q
    ||||||||||||||||||   ||||||||||||||||||| ||||||||||||||    
T  15651301 ctaaatccttggcaaaatacgcaggaaatgtgtttcctgcggaatttacacaaaa 15651247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 42755571 - 42755621
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  42755571 agtggcggagccaggaattatatagagcctgggcgaaaaatttatcgcaaa 42755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 304141 - 304198
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaa 352  Q
    |||| |||||||||||||||||||| || ||||||||||||||||  |||||||||||    
T  304141 ggaacctaaatccttggcaaaatctgcaagaaatgtgtttcctgcgaaatttacacaa 304198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 26161697 - 26161749
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| |||||||||| ||||| ||||| |||||||||||||||||||||    
T  26161697 ccagtggcggagccaggaaatttatggagcccgggcaaaaaatttatcgcaaa 26161749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 1542892 - 1542853
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaa 226  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  1542892 cagtggcggagccaggaattttatagagcctgggcaaaaa 1542853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 304072 - 304110
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcgga 297  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  304072 ataatttcacatttcctgcggatatatctttcctgcgga 304110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 12000691 - 12000653
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcgga 297  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12000691 ataatttcacatttcctgcggatatatctttcctgcgga 12000653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 300 - 358
Target Start/End: Original strand, 33909363 - 33909421
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    ||||||| |||| ||||||| |||||||||| | ||||||||||||| |||||||||||    
T  33909363 ctaaatctttggaaaaatctgcaggaaatgtttctcctgcagaattttcacaaaaattc 33909421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 436
Target Start/End: Complemental strand, 17148796 - 17148751
Alignment:
Q  391 tagtaatggttgggcttgctacaaagaaagttggagctgagtctgg 436  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||    
T  17148796 tagtaatggctgagcttgctacaaagaaagttggagctgagcctgg 17148751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 26655688 - 26655733
Alignment:
Q  189 gtggcagagccaggaattttatagagcctgggcaaaaaatttatcg 234  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||||    
T  26655688 gtggcggagccaaaaattttatagagcctgggcaaaaaatttatcg 26655733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 391 - 475
Target Start/End: Original strand, 4570580 - 4570663
Alignment:
Q  391 tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctg 475  Q
    ||||||||| ||||||| ||||||||||||| | |||| || ||||||    ||||| |||||||| ||||||||||||||||||    
T  4570580 tagtaatggctgggcttactacaaagaaagtagaagctcagcctgggctagtgcccatgctagctg-ggggtggctccgcccctg 4570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 15429272 - 15429216
Alignment:
Q  300 ctaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaat 356  Q
    ||||||||||| ||||||| ||||||||  |||||||||| |||||||||| |||||    
T  15429272 ctaaatccttgacaaaatccacaggaaacatgtttcctgcggaatttacaccaaaat 15429216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 34756897 - 34756841
Alignment:
Q  241 gttacttcctacctgcgaataatttcacatttcctacggatatatctttcctgcgga 297  Q
    |||||||||| |||||| ||||||  ||||||||| |||||||| ||||||||||||    
T  34756897 gttacttccttcctgcggataattgtacatttcctgcggatatacctttcctgcgga 34756841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 238
Target Start/End: Original strand, 8058317 - 8058355
Alignment:
Q  200 aggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  8058317 aggaaatttatggagcctgggcaaaaaatttatcgcaaa 8058355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 18425814 - 18425864
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||| ||| ||||||||||||||| | ||||||||||| ||||||||||    
T  18425814 agtggcggagtcaggaattttatagaacttgggcaaaaaaattatcgcaaa 18425864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 23346938 - 23346908
Alignment:
Q  16 caaaatcacggccaaaatgacaaccaaaaca 46  Q
    |||||||||||||||||||||||||||||||    
T  23346938 caaaatcacggccaaaatgacaaccaaaaca 23346908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 31162097 - 31162135
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaa 225  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  31162097 cagtggcggagccaggaaatttatagagcctgggcaaaa 31162135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 43780120 - 43780078
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatt 229  Q
    |||||||||||||||||||| ||||||| |||||| |||||||    
T  43780120 cagtggcagagccaggaattatatagagtctgggcgaaaaatt 43780078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 1955148 - 1955096
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| ||||||| |||||| |||||  ||| ||||||||||||||||||    
T  1955148 ccagtggcggagccagaaattttttagagtatggacaaaaaatttatcgcaaa 1955096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 12000558 - 12000502
Alignment:
Q  370 cgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggag 426  Q
    |||||||||||||||||  | || |||||| ||| |||| |||||||||||||||||    
T  12000558 cgcaggaaaagctaaaacttctactaatggctggacttgttacaaagaaagttggag 12000502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 15651382 - 15651342
Alignment:
Q  252 cctgcgaataatttcacatttcctacggatatatctttcct 292  Q
    |||||| |||||||||||||||||  |||||||||||||||    
T  15651382 cctgcggataatttcacatttcctggggatatatctttcct 15651342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 17090226 - 17090270
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaaatttatcg 234  Q
    ||||||||||||||| ||||| ||| | |||||||||||||||||    
T  17090226 tggcagagccaggaaatttatggagtccgggcaaaaaatttatcg 17090270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 34756977 - 34756941
Alignment:
Q  190 tggcagagccaggaattttatagagcctgggcaaaaa 226  Q
    |||| |||||| |||||||||||||||||||||||||    
T  34756977 tggcggagccaagaattttatagagcctgggcaaaaa 34756941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 187 - 472
Target Start/End: Complemental strand, 4305 - 4032
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatc 286  Q
    ||||||| ||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||   |||    
T  4305 cagtggcggagccataaattttatagagcctgggcaaaaaaattatcgcaaaatgttacttccttcctgcgaataatttcacatttcctacgga---atc 4209  T
Q  287 tttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |     || | ||    ||||| |||||||||| ||||||||||||||||| | ||||||||| ||| || | |||||||||||||||||||||||||||    
T  4208 t-----gcaggaa----atcctgggcaaaatctgcaggaaatgtgtttcctacggaatttacataaacatccgcaggtaaattcgcaggaaaagctaaaa 4118  T
Q  387 aatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgccc 472  Q
      | ||||||||| ||||||||||||||||||| ||||||||||| ||||||    |||||||||| ||| ||||||| |||||||    
T  4117 gttctagtaatggctgggcttgctacaaagaaaattggagctgagcctgggctagtgcccaggctaactggggggtggatccgccc 4032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 115; Significance: 3e-58; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 187 - 475
Target Start/End: Complemental strand, 11751 - 11456
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatt--------------- 271  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||                   
T  11751 cagtggcggagccaggaattttatagaacctgggcaaaaaatttatcgcaaaacgttacttccttcctacgaataatttcacatttcctgcagataaatt 11652  T
Q  272 ------tcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
          ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||| |||| ||||||||||||                 
T  11651 cacatttcctacggatatatctttcctgcggaacctaaatccttggcaaaatctgcaggaaatgcattttctgcggaatttacacaa------------t 11564  T
Q  366 aattcgcaggaaaagctaaaaaatt-tagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtgg 464  Q
    ||| |||||||||||  |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  11563 aatccgcaggaaaag--aaaaaattctagtaatggtagggcttgctacaaagaaagttggagctgagcctgggcactagtccaggctagctg-ggggtgg 11467  T

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Target: scaffold0075; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 259 - 473
Target Start/End: Complemental strand, 7045 - 6843
Alignment:
Q  259 ataatttcacatttcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattc 358  Q
    |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||  |||||| | ||||||||||||          
T  7045 ataaattcacatttcctacggatatatccttcctgcggaacctaaatccttggcaaaatctgcaggaaatgcatttccttcggaatttacacaa------ 6952  T
Q  359 acaggtaaattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgag 458  Q
           ||| |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||| |||||||||    |||||||||||||  |    
T  6951 ------taatccgcaggaaaagctaaaaattctagtaatggtagggcttgctacaaagaaagttggagctaagtctgggctagtgcccaggctagcttgg 6858  T
Q  459 gggtggctccgcccc 473  Q
    ||| |||||||||||    
T  6857 gggaggctccgcccc 6843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 7129 - 7060
Alignment:
Q  195 gagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataattt 265  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  7129 gagctaggaattttatagaacctgggcaaaaaatttatcgc-aaacgttacttccttcctacgaataattt 7060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 187 - 431
Target Start/End: Complemental strand, 1923 - 1670
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaaacgttacttcctacctgcgaataatttcacatt--------------- 271  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||                   
T  1923 cagtggcggagccaggaattttatagagtctgggcaaaaaatttatcgcaaaacgttacttcctttctgcgaataatttcacatttcctgcagataagtt 1824  T
Q  272 ------tcctacggatatatctttcctgcggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggta 365  Q
          |||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||  |||||||||||            |    
T  1823 cacatttcctacggatatatctttcctgcggaacgtaaattcttggcaaaatctgcaggaaatgtgtttcctgcgaaatttacacaa------------a 1736  T
Q  366 aattcgcaggaaaagctaaaaaatttagtaatggttgggcttgctacaaagaaagttggagctgag 431  Q
    ||| || |||||||| |||||| |||| ||||| |||||||| |||||||||||||||||||||||    
T  1735 aatccgaaggaaaaggtaaaaattttaataatgattgggctttctacaaagaaagttggagctgag 1670  T

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Target: scaffold0021 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 295 - 436
Target Start/End: Original strand, 109316 - 109457
Alignment:
Q  295 ggaaactaaatccttggcaaaatctacaggaaatgtgtttcctgcagaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaaaatttagt 394  Q
    |||| |||||| ||| ||||||||| ||| | |||||||| |||| |||||||||||||||||| ||||||||| | ||||||||| |||||  | ||||    
T  109316 ggaacctaaattcttagcaaaatctgcagaacatgtgttttctgcggaatttacacaaaaattcgcaggtaaatccacaggaaaagttaaaagttctagt 109415  T
Q  395 aatggttgggcttgctacaaagaaagttggagctgagtctgg 436  Q
    |||   |||| |||||||||||||||||||||||||| ||||    
T  109416 aataactggggttgctacaaagaaagttggagctgagcctgg 109457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 203 - 297
Target Start/End: Original strand, 112108 - 112203
Alignment:
Q  203 aattttatagagcctgggcaaaaa-atttatcgcaaaacgttacttcctacctgcgaataatttcacatttcctacggatatatctttcctgcgga 297  Q
    ||||| || ||||||||||||||| |||||| ||||||| ||||||||| ||||| ||||||||||| |||| |  ||||||||||||||||||||    
T  112108 aatttcattgagcctgggcaaaaatatttattgcaaaacattacttccttcctgcaaataatttcacgtttcatgtggatatatctttcctgcgga 112203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 275
Target Start/End: Original strand, 109207 - 109280
Alignment:
Q  203 aattttatagagcctgggcaaaaa-atttatcgcaaaacgttacttcctacctgcgaataatttcacatttcct 275  Q
    ||||| ||||||||||| |||||| |||||| ||||||| ||||||||| ||||||||||||||||| ||||||    
T  109207 aatttcatagagcctggacaaaaatatttattgcaaaacattacttccttcctgcgaataatttcacgtttcct 109280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 112277 - 112322
Alignment:
Q  341 gaatttacacaaaaattcacaggtaaattcgcaggaaaagctaaaa 386  Q
    |||||||||||||||||| ||||||||| || |||||||| |||||    
T  112277 gaatttacacaaaaattcgcaggtaaatccgtaggaaaagttaaaa 112322  T

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Target: scaffold0108 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 385 - 476
Target Start/End: Original strand, 21093 - 21184
Alignment:
Q  385 aaaatttagtaatggttgggcttgctacaaagaaagttggagctgagtctgggcactagcccaggctagctgaggggtggctccgcccctgt 476  Q
    |||| |||||||||| ||||||||  ||||||||||||| ||||||| ||||||    |||||||||||||| ||  |||||||||||||||    
T  21093 aaaagttagtaatggctgggcttgtaacaaagaaagttgaagctgagcctgggctagtgcccaggctagctggggattggctccgcccctgt 21184  T

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Target: scaffold0015 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 238
Target Start/End: Original strand, 214018 - 214069
Alignment:
Q  187 cagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    ||||||| |||| |||||||||||||||| |||||||||| |||||||||||    
T  214018 cagtggcggagctaggaattttatagagcttgggcaaaaagtttatcgcaaa 214069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 21945 - 21995
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||| |||||||||| ||||| |||||  ||||||||||||||||||||    
T  21945 agtggcggagccaggaaatttatggagcccaggcaaaaaatttatcgcaaa 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 27447 - 27497
Alignment:
Q  188 agtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||| |||||||||| ||||| |||||  ||||||||||||||||||||    
T  27447 agtggcggagccaggaaatttatggagcccaggcaaaaaatttatcgcaaa 27497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 16100 - 16048
Alignment:
Q  186 ccagtggcagagccaggaattttatagagcctgggcaaaaaatttatcgcaaa 238  Q
    |||||||| ||||||||||||| |||||||||||||  ||||| |||| ||||    
T  16100 ccagtggcggagccaggaatttcatagagcctgggcggaaaatatatcacaaa 16048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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