View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20317_low_3 (Length: 395)

Name: NF20317_low_3
Description: NF20317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20317_low_3
NF20317_low_3
[»] chr1 (29 HSPs)
chr1 (6-302)||(35033878-35034178)
chr1 (358-395)||(2059277-2059314)
chr1 (358-395)||(4646841-4646878)
chr1 (358-395)||(5330591-5330628)
chr1 (358-395)||(5348306-5348343)
chr1 (358-395)||(27794441-27794478)
chr1 (358-395)||(28724466-28724503)
chr1 (358-395)||(36343239-36343276)
chr1 (361-395)||(35167948-35167982)
chr1 (358-395)||(5330503-5330540)
chr1 (358-395)||(6540802-6540839)
chr1 (358-395)||(27794530-27794567)
chr1 (358-395)||(28411084-28411121)
chr1 (358-395)||(28724379-28724416)
chr1 (358-395)||(31532427-31532464)
chr1 (358-395)||(36343323-36343360)
chr1 (358-395)||(42736759-42736796)
chr1 (358-388)||(18458741-18458771)
chr1 (358-388)||(22604542-22604572)
chr1 (361-395)||(29018536-29018570)
chr1 (358-388)||(33573815-33573845)
chr1 (358-395)||(2059364-2059400)
chr1 (358-395)||(4646930-4646967)
chr1 (358-395)||(7112577-7112614)
chr1 (358-395)||(13154663-13154699)
chr1 (358-395)||(16699042-16699078)
chr1 (358-387)||(31955426-31955455)
chr1 (358-395)||(42736672-42736709)
chr1 (358-391)||(51904066-51904099)
[»] chr6 (16 HSPs)
chr6 (81-314)||(32571284-32571517)
chr6 (358-395)||(24062333-24062370)
chr6 (358-395)||(33561808-33561845)
chr6 (358-395)||(33561895-33561932)
chr6 (358-393)||(13357440-13357475)
chr6 (362-395)||(5334726-5334759)
chr6 (358-395)||(12321118-12321155)
chr6 (358-395)||(13357524-13357561)
chr6 (358-395)||(29942383-29942420)
chr6 (360-395)||(3593423-3593458)
chr6 (358-393)||(3593510-3593545)
chr6 (361-395)||(4840767-4840801)
chr6 (358-395)||(30245918-30245956)
chr6 (362-395)||(12321032-12321065)
chr6 (358-395)||(30246001-30246038)
chr6 (358-386)||(19325702-19325730)
[»] scaffold0450 (2 HSPs)
scaffold0450 (358-395)||(8032-8069)
scaffold0450 (360-395)||(7944-7979)
[»] scaffold0010 (1 HSPs)
scaffold0010 (358-395)||(26472-26509)
[»] chr8 (20 HSPs)
chr8 (358-395)||(7988960-7988997)
chr8 (358-395)||(8307946-8307983)
chr8 (358-395)||(14329537-14329574)
chr8 (358-395)||(25601797-25601834)
chr8 (358-395)||(43945337-43945374)
chr8 (358-395)||(8388200-8388237)
chr8 (362-395)||(25601889-25601922)
chr8 (362-395)||(27198316-27198349)
chr8 (358-395)||(29726187-29726224)
chr8 (358-395)||(43121162-43121199)
chr8 (358-388)||(25277564-25277594)
chr8 (358-388)||(27198235-27198265)
chr8 (358-388)||(27543483-27543513)
chr8 (358-388)||(27543561-27543591)
chr8 (358-388)||(41565363-41565393)
chr8 (358-395)||(960354-960390)
chr8 (358-395)||(4105131-4105167)
chr8 (358-395)||(12330416-12330452)
chr8 (358-395)||(34019062-34019098)
chr8 (358-395)||(38500450-38500487)
[»] chr7 (32 HSPs)
chr7 (358-395)||(1693301-1693338)
chr7 (358-395)||(15037311-15037348)
chr7 (358-395)||(19410594-19410631)
chr7 (358-395)||(24205288-24205325)
chr7 (358-395)||(24206806-24206843)
chr7 (358-395)||(31186752-31186789)
chr7 (359-395)||(13286802-13286838)
chr7 (358-394)||(45163997-45164033)
chr7 (361-395)||(31186844-31186878)
chr7 (358-395)||(13279268-13279305)
chr7 (358-395)||(13279354-13279391)
chr7 (358-395)||(19272387-19272424)
chr7 (358-395)||(35913220-35913257)
chr7 (358-395)||(38193044-38193081)
chr7 (358-394)||(4518037-4518073)
chr7 (358-388)||(20040991-20041021)
chr7 (361-395)||(23784665-23784699)
chr7 (358-395)||(12814675-12814712)
chr7 (358-395)||(13286713-13286750)
chr7 (358-395)||(19272301-19272338)
chr7 (358-395)||(23371618-23371654)
chr7 (358-395)||(24555788-24555824)
chr7 (358-395)||(26050342-26050379)
chr7 (358-395)||(26059701-26059738)
chr7 (358-395)||(26930717-26930753)
chr7 (358-395)||(38193132-38193168)
chr7 (358-395)||(39118960-39118997)
chr7 (358-395)||(48104585-48104621)
chr7 (358-395)||(48104666-48104702)
chr7 (367-395)||(19410698-19410726)
chr7 (359-395)||(26050256-26050291)
chr7 (359-395)||(26059615-26059650)
[»] chr5 (28 HSPs)
chr5 (358-395)||(12330937-12330974)
chr5 (358-395)||(20688878-20688915)
chr5 (358-395)||(31861574-31861611)
chr5 (359-395)||(31861664-31861700)
chr5 (358-395)||(9226933-9226970)
chr5 (358-395)||(12382909-12382946)
chr5 (358-395)||(21149037-21149074)
chr5 (358-395)||(39153471-39153508)
chr5 (358-395)||(39153561-39153598)
chr5 (358-393)||(711324-711359)
chr5 (360-395)||(9227023-9227058)
chr5 (360-395)||(41797676-41797711)
chr5 (358-388)||(5718317-5718347)
chr5 (358-388)||(26034938-26034968)
chr5 (358-388)||(33658962-33658992)
chr5 (358-395)||(37204833-37204871)
chr5 (358-395)||(2870822-2870859)
chr5 (359-388)||(16304968-16304997)
chr5 (358-395)||(18229804-18229840)
chr5 (358-395)||(26035020-26035056)
chr5 (358-391)||(29754135-29754168)
chr5 (358-395)||(33052900-33052936)
chr5 (358-395)||(36354721-36354758)
chr5 (358-395)||(37204918-37204954)
chr5 (358-395)||(39418889-39418925)
chr5 (358-395)||(40339414-40339450)
chr5 (358-395)||(42119227-42119263)
chr5 (360-388)||(10976686-10976714)
[»] chr4 (32 HSPs)
chr4 (358-395)||(18454277-18454314)
chr4 (358-395)||(45900722-45900759)
chr4 (360-395)||(6439268-6439303)
chr4 (358-393)||(11563377-11563412)
chr4 (358-395)||(1386175-1386212)
chr4 (358-395)||(16493601-16493638)
chr4 (358-395)||(17289913-17289950)
chr4 (358-395)||(18320633-18320670)
chr4 (358-395)||(51965453-51965490)
chr4 (359-395)||(53231857-53231893)
chr4 (360-395)||(10682765-10682800)
chr4 (360-395)||(10717992-10718027)
chr4 (360-395)||(10896405-10896440)
chr4 (360-395)||(10931761-10931796)
chr4 (360-395)||(16482226-16482261)
chr4 (360-395)||(16493660-16493695)
chr4 (358-388)||(5401853-5401883)
chr4 (361-391)||(16482142-16482172)
chr4 (358-395)||(9791582-9791618)
chr4 (358-395)||(11563464-11563501)
chr4 (358-395)||(13334907-13334943)
chr4 (358-395)||(15157012-15157049)
chr4 (358-395)||(17289826-17289862)
chr4 (358-395)||(18320545-18320582)
chr4 (358-395)||(21798416-21798452)
chr4 (358-395)||(21798504-21798540)
chr4 (358-395)||(43751217-43751253)
chr4 (358-395)||(44519631-44519667)
chr4 (358-395)||(56216882-56216918)
chr4 (358-395)||(56467497-56467533)
chr4 (358-395)||(56467585-56467621)
chr4 (367-395)||(9001527-9001555)
[»] chr3 (31 HSPs)
chr3 (358-395)||(3548205-3548242)
chr3 (358-395)||(3548292-3548329)
chr3 (358-395)||(8355503-8355540)
chr3 (358-395)||(27432756-27432793)
chr3 (358-395)||(30271627-30271664)
chr3 (358-395)||(49872886-49872923)
chr3 (358-395)||(51252132-51252169)
chr3 (361-395)||(30586247-30586281)
chr3 (358-395)||(19623947-19623984)
chr3 (358-395)||(25109999-25110036)
chr3 (358-395)||(29313869-29313906)
chr3 (358-395)||(30271715-30271752)
chr3 (358-395)||(30586334-30586371)
chr3 (358-395)||(51252220-51252257)
chr3 (360-395)||(22949330-22949365)
chr3 (360-395)||(32012013-32012048)
chr3 (360-395)||(36867719-36867754)
chr3 (360-395)||(43767831-43767866)
chr3 (358-388)||(5205290-5205320)
chr3 (358-388)||(27521613-27521643)
chr3 (358-388)||(49880594-49880624)
chr3 (358-395)||(5416144-5416180)
chr3 (358-395)||(7584330-7584366)
chr3 (358-395)||(10979929-10979965)
chr3 (358-395)||(12767105-12767141)
chr3 (358-387)||(20957039-20957068)
chr3 (358-395)||(27760372-27760409)
chr3 (358-395)||(27760459-27760495)
chr3 (358-395)||(46902040-46902077)
chr3 (367-395)||(22949428-22949456)
chr3 (359-395)||(49872799-49872834)
[»] chr2 (27 HSPs)
chr2 (358-395)||(25227908-25227945)
chr2 (358-395)||(28149517-28149554)
chr2 (358-395)||(28484442-28484479)
chr2 (358-395)||(37147634-37147671)
chr2 (360-395)||(16577198-16577233)
chr2 (358-395)||(3364498-3364535)
chr2 (358-395)||(9011921-9011958)
chr2 (358-395)||(12693658-12693695)
chr2 (358-395)||(22535620-22535657)
chr2 (358-395)||(25227995-25228032)
chr2 (362-395)||(30371468-30371501)
chr2 (358-395)||(37147722-37147759)
chr2 (358-395)||(38386099-38386136)
chr2 (358-388)||(18555668-18555698)
chr2 (365-395)||(23260402-23260432)
chr2 (358-388)||(34635797-34635827)
chr2 (358-388)||(34635878-34635908)
chr2 (358-395)||(1498969-1499005)
chr2 (358-395)||(3364409-3364446)
chr2 (358-395)||(17328262-17328299)
chr2 (358-395)||(25926967-25927003)
chr2 (358-395)||(29098186-29098223)
chr2 (358-391)||(30371549-30371582)
chr2 (358-395)||(39227877-39227913)
chr2 (358-395)||(39227964-39228001)
chr2 (359-387)||(34428729-34428757)
chr2 (358-386)||(43302051-43302079)
[»] scaffold0031 (1 HSPs)
scaffold0031 (359-395)||(1996-2032)
[»] scaffold0740 (1 HSPs)
scaffold0740 (358-395)||(3729-3766)
[»] scaffold0384 (1 HSPs)
scaffold0384 (358-395)||(4367-4404)
[»] scaffold0079 (1 HSPs)
scaffold0079 (358-395)||(6915-6952)
[»] scaffold0769 (2 HSPs)
scaffold0769 (358-388)||(4006-4036)
scaffold0769 (358-388)||(4087-4117)
[»] scaffold0809 (2 HSPs)
scaffold0809 (358-395)||(3849-3886)
scaffold0809 (358-395)||(3936-3972)
[»] scaffold0727 (1 HSPs)
scaffold0727 (358-395)||(915-951)
[»] scaffold0041 (1 HSPs)
scaffold0041 (359-395)||(38132-38167)


Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 302
Target Start/End: Original strand, 35033878 - 35034178
Alignment:
Q  6 atagacacacgagcgcacacacatacaca----gttgctgataaataaaggttaacnnnnnnnnnnnnctcaattgttttgcaatgcaggaagagaaaga 101  Q
    |||||||||||||||||||||||||||||    |||||||||||||||||||||||            ||||||||||||||||||||||||||||||||    
T  35033878 atagacacacgagcgcacacacatacacacattgttgctgataaataaaggttaactttttttttttgctcaattgttttgcaatgcaggaagagaaaga 35033977  T
Q  102 gggacttctctgaatgctataaaccaccttgccccatgacagatgtcgggcaaaaaatagtgatccgagttgaaagcgatgaagacattttggatgatgg 201  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35033978 gggacttctctgaatgctataaaacaccttgccccatgacagatgccgggcaaaaaatagtgatccgagttgaaagcgatgaagacattttggatgatgg 35034077  T
Q  202 ttattgttggcgcaagtacggatgcaaagagatcaaaggaaatcctaacaatcctaggtaactatttacctattttatatgtgtcaatgcaagtatgtgt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35034078 ttattgttggcgcaagtacggatgcaaagagatcaaaggaaatcctaacaatcctaggtaactatttacctattttatatgtgtcaatgcaagtatgtgt 35034177  T
Q  302 a 302  Q
    |    
T  35034178 a 35034178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 2059314 - 2059277
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2059314 ggcctattaggggggtaaatcaaaacaaaaatatttta 2059277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 4646878 - 4646841
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4646878 ggcctattaggggggtaaatcaaaacaaaaatatttta 4646841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 5330591 - 5330628
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5330591 ggcctattaggggggtaaatcaaaacaaaaatatttta 5330628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 5348306 - 5348343
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5348306 ggcctattaggggggtaaatcaaaacaaaaatatttta 5348343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 27794478 - 27794441
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27794478 ggcctattaggggggtaaatcaaaacaaaaatatttta 27794441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 28724466 - 28724503
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28724466 ggcctattaggggggtaaatcaaaacaaaaatatttta 28724503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 36343276 - 36343239
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36343276 ggcctattaggggggtaaatcaaaacaaaaatatttta 36343239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 361 - 395
Target Start/End: Original strand, 35167948 - 35167982
Alignment:
Q  361 ctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||||||||    
T  35167948 ctattaggggggtaaatcaaaacaaaaatatttta 35167982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 5330540 - 5330503
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  5330540 ggcctattagggggataaatcaaaacaaaaatatttta 5330503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 6540839 - 6540802
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| |||||||||||||||||||||||||||    
T  6540839 ggcctattagaggggtaaatcaaaacaaaaatatttta 6540802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 27794530 - 27794567
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  27794530 ggcctattaggggggtaaagcaaaacaaaaatatttta 27794567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 28411084 - 28411121
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| |||||||||||||||||||||||||||    
T  28411084 ggcctattagaggggtaaatcaaaacaaaaatatttta 28411121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 28724416 - 28724379
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  28724416 ggcctattaggagggtaaatcaaaacaaaaatatttta 28724379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 31532427 - 31532464
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||||||||    
T  31532427 ggcctattagggaggtaaatcaaaacaaaaatatttta 31532464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 36343323 - 36343360
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36343323 ggcctattaagggggtaaatcaaaacaaaaatatttta 36343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 42736759 - 42736796
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  42736759 ggcctattaggggggtaaatcaagacaaaaatatttta 42736796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 18458741 - 18458771
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  18458741 ggcctattaggggggtaaatcaaaacaaaaa 18458771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 22604572 - 22604542
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  22604572 ggcctattaggggggtaaatcaaaacaaaaa 22604542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 361 - 395
Target Start/End: Original strand, 29018536 - 29018570
Alignment:
Q  361 ctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| |||||||||||||||||||||||||||    
T  29018536 ctattagaggggtaaatcaaaacaaaaatatttta 29018570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 33573815 - 33573845
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  33573815 ggcctattaggggggtaaatcaaaacaaaaa 33573845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 2059364 - 2059400
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2059364 ggcctattagggg-gtaaatcaaaacaaaaatatttta 2059400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 4646930 - 4646967
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  4646930 ggcctattaggagggtaaatcaaaacaaaaacatttta 4646967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 7112614 - 7112577
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  7112614 ggcctattagggggataaatcaaaacaaaaatgtttta 7112577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 13154699 - 13154663
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  13154699 ggcctattaggggg-taaatcaaaacaaaaatatttta 13154663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 16699042 - 16699078
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  16699042 ggcctattagggg-gtaaatcaaaacaaaaatatttta 16699078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 387
Target Start/End: Original strand, 31955426 - 31955455
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaa 387  Q
    ||||||||||||||||||||||||||||||    
T  31955426 ggcctattaggggggtaaatcaaaacaaaa 31955455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 42736709 - 42736672
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  42736709 ggcctattaggagagtaaatcaaaacaaaaatatttta 42736672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 391
Target Start/End: Complemental strand, 51904099 - 51904066
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatat 391  Q
    |||||||||||| |||||||||||||||||||||    
T  51904099 ggcctattagggaggtaaatcaaaacaaaaatat 51904066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 314
Target Start/End: Original strand, 32571284 - 32571517
Alignment:
Q  81 tgcaatgcaggaagagaaagagggacttctctgaatgctataaaccaccttgccccatgacagatgtcgggcaaaaaatagtgatccgagttgaaagcga 180  Q
    |||||||||||||||| || |  ||||||||||||  ||||||||  |||||| |||||| | |||| |  | |||| ||||| || || |||||| | |    
T  32571284 tgcaatgcaggaagaggaaaattgacttctctgaacactataaactcccttgcaccatgataaatgttgcaccaaaagtagtgttcagaattgaaatcaa 32571383  T
Q  181 tgaagacattttggatgatggttattgttggcgcaagtacggatgcaaagagatcaaaggaaatcctaacaatcctaggtaactatttacctattttata 280  Q
    ||||||||   || ||||||||||| | ||||  ||||| ||| |||| ||||||||||||||| ||||  | ||||||||| ||||||||| |||        
T  32571384 tgaagacaaagtgaatgatggttatcgctggcataagtatggacgcaaggagatcaaaggaaatgctaattaccctaggtaattatttacctttttccct 32571483  T
Q  281 tgtgtcaatgcaagtatgtgtatattgataaatg 314  Q
     ||| |||||||||||| |||||||| |||||||    
T  32571484 ggtgccaatgcaagtatatgtatatttataaatg 32571517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 24062333 - 24062370
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24062333 ggcctattaggggggtaaatcaaaacaaaaatatttta 24062370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 33561845 - 33561808
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33561845 ggcctattaggggggtaaatcaaaacaaaaatatttta 33561808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 33561895 - 33561932
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33561895 ggcctattaggggggtaaatcaaaacaaaaatatttta 33561932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 393
Target Start/End: Complemental strand, 13357475 - 13357440
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatattt 393  Q
    ||||||||||||||||||||||||||||||||||||    
T  13357475 ggcctattaggggggtaaatcaaaacaaaaatattt 13357440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 395
Target Start/End: Complemental strand, 5334759 - 5334726
Alignment:
Q  362 tattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||    
T  5334759 tattaggggggtaaatcaaaacaaaaatatttta 5334726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 12321118 - 12321155
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||| |||||||||||||||||||||||||||||||||    
T  12321118 ggccaattaggggggtaaatcaaaacaaaaatatttta 12321155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 13357524 - 13357561
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  13357524 ggcctattaggggcgtaaatcaaaacaaaaatatttta 13357561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 29942383 - 29942420
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  29942383 ggcctattaggggggtaaatcaaaataaaaatatttta 29942420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 3593458 - 3593423
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| |||||||||||||||||||||||||    
T  3593458 cctattagggaggtaaatcaaaacaaaaatatttta 3593423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 393
Target Start/End: Original strand, 3593510 - 3593545
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatattt 393  Q
    |||| |||||||||||||||||||||||||||||||    
T  3593510 ggccgattaggggggtaaatcaaaacaaaaatattt 3593545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 361 - 395
Target Start/End: Complemental strand, 4840801 - 4840767
Alignment:
Q  361 ctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||| ||||||||||||||||||||||||||||    
T  4840801 ctattaagggggtaaatcaaaacaaaaatatttta 4840767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 30245956 - 30245918
Alignment:
Q  358 ggcctattagggggg-taaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  30245956 ggcctattagggggggtaaatcaaaacaaaaatatttta 30245918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 395
Target Start/End: Complemental strand, 12321065 - 12321032
Alignment:
Q  362 tattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||| |||||||||||||||||||||||||||    
T  12321065 tattagaggggtaaatcaaaacaaaaatatttta 12321032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 30246001 - 30246038
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  30246001 ggcctattatgggggtaaatcaaaactaaaatatttta 30246038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 358 - 386
Target Start/End: Complemental strand, 19325730 - 19325702
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaa 386  Q
    |||||||||||||||||||||||||||||    
T  19325730 ggcctattaggggggtaaatcaaaacaaa 19325702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 8032 - 8069
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8032 ggcctattaggggggtaaatcaaaacaaaaatatttta 8069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 7979 - 7944
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7979 cctattatgggggtaaatcaaaacaaaaatatttta 7944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 26472 - 26509
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26472 ggcctattaggggggtaaatcaaaacaaaaatatttta 26509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 7988960 - 7988997
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7988960 ggcctattaggggggtaaatcaaaacaaaaatatttta 7988997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 8307983 - 8307946
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8307983 ggcctattaggggggtaaatcaaaacaaaaatatttta 8307946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 14329537 - 14329574
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14329537 ggcctattaggggggtaaatcaaaacaaaaatatttta 14329574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 25601834 - 25601797
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25601834 ggcctattaggggggtaaatcaaaacaaaaatatttta 25601797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 43945337 - 43945374
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43945337 ggcctattaggggggtaaatcaaaacaaaaatatttta 43945374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 8388237 - 8388200
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| |||||||||||||||||||||||||||    
T  8388237 ggcctattagaggggtaaatcaaaacaaaaatatttta 8388200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 395
Target Start/End: Original strand, 25601889 - 25601922
Alignment:
Q  362 tattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||    
T  25601889 tattaggggggtaaatcaaaacaaaaatatttta 25601922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 395
Target Start/End: Original strand, 27198316 - 27198349
Alignment:
Q  362 tattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||    
T  27198316 tattaggggggtaaatcaaaacaaaaatatttta 27198349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 29726224 - 29726187
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||| |||||||||||||    
T  29726224 ggcctattaggggggtaaatcaaaccaaaaatatttta 29726187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 43121199 - 43121162
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  43121199 ggcctattaggggagtaaatcaaaacaaaaatatttta 43121162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 25277594 - 25277564
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  25277594 ggcctattaggggggtaaatcaaaacaaaaa 25277564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 27198265 - 27198235
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  27198265 ggcctattaggggggtaaatcaaaacaaaaa 27198235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 27543513 - 27543483
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  27543513 ggcctattaggggggtaaatcaaaacaaaaa 27543483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 27543561 - 27543591
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  27543561 ggcctattaggggggtaaatcaaaacaaaaa 27543591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 41565393 - 41565363
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  41565393 ggcctattaggggggtaaatcaaaacaaaaa 41565363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 960390 - 960354
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  960390 ggcctattaggggg-taaatcaaaacaaaaatatttta 960354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 4105167 - 4105131
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  4105167 ggcctattaggggg-taaatcaaaacaaaaatatttta 4105131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 12330452 - 12330416
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12330452 ggcctattaggggg-taaatcaaaacaaaaatatttta 12330416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 34019062 - 34019098
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  34019062 ggcctattagggg-gtaaatcaaaacaaaaatatttta 34019098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 38500450 - 38500487
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  38500450 ggcctattagaggggtaattcaaaacaaaaatatttta 38500487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 1693338 - 1693301
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1693338 ggcctattaggggggtaaatcaaaacaaaaatatttta 1693301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 15037348 - 15037311
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15037348 ggcctattaggggggtaaatcaaaacaaaaatatttta 15037311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 19410631 - 19410594
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19410631 ggcctattaggggggtaaatcaaaacaaaaatatttta 19410594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 24205288 - 24205325
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24205288 ggcctattaggggggtaaatcaaaacaaaaatatttta 24205325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 24206806 - 24206843
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24206806 ggcctattaggggggtaaatcaaaacaaaaatatttta 24206843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 31186789 - 31186752
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31186789 ggcctattaggggggtaaatcaaaacaaaaatatttta 31186752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 395
Target Start/End: Original strand, 13286802 - 13286838
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||||||||||    
T  13286802 gcctattaggggggtaaatcaaaacaaaaatatttta 13286838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 358 - 394
Target Start/End: Complemental strand, 45164033 - 45163997
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttt 394  Q
    |||||||||||||||||||||||||||||||||||||    
T  45164033 ggcctattaggggggtaaatcaaaacaaaaatatttt 45163997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 361 - 395
Target Start/End: Original strand, 31186844 - 31186878
Alignment:
Q  361 ctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||||||||    
T  31186844 ctattaggggggtaaatcaaaacaaaaatatttta 31186878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 13279305 - 13279268
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  13279305 ggcctattaagggggtaaatcaaaacaaaaatatttta 13279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 13279354 - 13279391
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||||||||    
T  13279354 ggcctattagggcggtaaatcaaaacaaaaatatttta 13279391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 19272387 - 19272424
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  19272387 ggcctattaggggggtaaatcaaaataaaaatatttta 19272424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 35913220 - 35913257
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  35913220 ggcctattaagggggtaaatcaaaacaaaaatatttta 35913257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 38193081 - 38193044
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| |||||||||||||||||||||||||||    
T  38193081 ggcctattagaggggtaaatcaaaacaaaaatatttta 38193044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 394
Target Start/End: Original strand, 4518037 - 4518073
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttt 394  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4518037 ggcctattaggtgggtaaatcaaaacaaaaatatttt 4518073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 20041021 - 20040991
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  20041021 ggcctattaggggggtaaatcaaaacaaaaa 20040991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 361 - 395
Target Start/End: Complemental strand, 23784699 - 23784665
Alignment:
Q  361 ctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||| |||||||||||||||||    
T  23784699 ctattaggggggtaaattaaaacaaaaatatttta 23784665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 12814712 - 12814675
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  12814712 ggcctattaagggggtaaatcaaaacaaaaacatttta 12814675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 13286750 - 13286713
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  13286750 ggcctattatgggggtaaatcaaaagaaaaatatttta 13286713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 19272338 - 19272301
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  19272338 ggcctattaggggggtaaattaaaacaaaaaaatttta 19272301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 23371618 - 23371654
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  23371618 ggcctattagggg-gtaaatcaaaacaaaaatatttta 23371654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 24555824 - 24555788
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24555824 ggcctattaggggg-taaatcaaaacaaaaatatttta 24555788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 26050342 - 26050379
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  26050342 ggcctattaggggggtaattcaaaacaaaagtatttta 26050379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 26059701 - 26059738
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  26059701 ggcctattaggggggtaattcaaaacaaaagtatttta 26059738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 26930753 - 26930717
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26930753 ggcctattaggggg-taaatcaaaacaaaaatatttta 26930717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 38193132 - 38193168
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  38193132 ggcctattagggg-gtaaatcaaaacaaaaatatttta 38193168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 39118997 - 39118960
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||| || |||||||||||||||||||||||    
T  39118997 ggcctattaggcggataaatcaaaacaaaaatatttta 39118960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 48104621 - 48104585
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  48104621 ggcctattaggggg-taaatcaaaacaaaaatatttta 48104585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 48104666 - 48104702
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  48104666 ggcctattagggg-gtaaatcaaaacaaaaatatttta 48104702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 367 - 395
Target Start/End: Original strand, 19410698 - 19410726
Alignment:
Q  367 ggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||    
T  19410698 ggggggtaaatcaaaacaaaaatatttta 19410726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 26050291 - 26050256
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26050291 gcctattaggggg-taaatcaaaacaaaaatatttta 26050256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 26059650 - 26059615
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26059650 gcctattaggggg-taaatcaaaacaaaaatatttta 26059615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 12330974 - 12330937
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12330974 ggcctattaggggggtaaatcaaaacaaaaatatttta 12330937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 20688915 - 20688878
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20688915 ggcctattaggggggtaaatcaaaacaaaaatatttta 20688878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 31861611 - 31861574
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31861611 ggcctattaggggggtaaatcaaaacaaaaatatttta 31861574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 395
Target Start/End: Original strand, 31861664 - 31861700
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||||||||||    
T  31861664 gcctattaggggggtaaatcaaaacaaaaatatttta 31861700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 9226970 - 9226933
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||||||||    
T  9226970 ggcctattagggaggtaaatcaaaacaaaaatatttta 9226933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 12382946 - 12382909
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||||||||    
T  12382946 ggcctattagggaggtaaatcaaaacaaaaatatttta 12382909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 21149037 - 21149074
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  21149037 ggcctattaggggagtaaatcaaaacaaaaatatttta 21149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 39153508 - 39153471
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  39153508 ggcctattagggggataaatcaaaacaaaaatatttta 39153471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 39153561 - 39153598
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  39153561 ggcctattaggggagtaaatcaaaacaaaaatatttta 39153598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 393
Target Start/End: Complemental strand, 711359 - 711324
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatattt 393  Q
    |||||||||| |||||||||||||||||||||||||    
T  711359 ggcctattagaggggtaaatcaaaacaaaaatattt 711324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 9227023 - 9227058
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| ||||||||||||||||||||||||||||    
T  9227023 cctattaagggggtaaatcaaaacaaaaatatttta 9227058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 41797676 - 41797711
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| |||||||||||||||||||||||||    
T  41797676 cctattagggaggtaaatcaaaacaaaaatatttta 41797711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 5718347 - 5718317
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  5718347 ggcctattaggggggtaaatcaaaacaaaaa 5718317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 26034968 - 26034938
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  26034968 ggcctattaggggggtaaatcaaaacaaaaa 26034938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 33658992 - 33658962
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  33658992 ggcctattaggggggtaaatcaaaacaaaaa 33658962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 37204871 - 37204833
Alignment:
Q  358 ggcctatta-ggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  37204871 ggcctattanggggggtaaatcaaaacaaaaatatttta 37204833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 2870822 - 2870859
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||| || ||||||    
T  2870822 ggcctattaggggggtaaatcaaaacaataaaatttta 2870859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 359 - 388
Target Start/End: Complemental strand, 16304997 - 16304968
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaaa 388  Q
    ||||||||||||||||||||||||||||||    
T  16304997 gcctattaggggggtaaatcaaaacaaaaa 16304968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 18229840 - 18229804
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  18229840 ggcctattaggggg-taaatcaaaacaaaaatatttta 18229804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 26035020 - 26035056
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26035020 ggcctattagggg-gtaaatcaaaacaaaaatatttta 26035056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 391
Target Start/End: Complemental strand, 29754168 - 29754135
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatat 391  Q
    ||||||||||||||||||||||||| ||||||||    
T  29754168 ggcctattaggggggtaaatcaaaataaaaatat 29754135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 33052936 - 33052900
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  33052936 ggcctattaggggg-taaatcaaaacaaaaatatttta 33052900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 36354721 - 36354758
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| || |||||||||||||||||||||||||    
T  36354721 ggcctattaaggaggtaaatcaaaacaaaaatatttta 36354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 37204918 - 37204954
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||| |||||||||||||||||||||||||||||    
T  37204918 ggcctatt-ggggggtaaatcaaaacaaaaatatttta 37204954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 39418889 - 39418925
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  39418889 ggcctattagggg-gtaaatcaaaacaaaaatatttta 39418925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 40339450 - 40339414
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  40339450 ggcctattaggggg-taaatcaaaacaaaaatatttta 40339414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 42119227 - 42119263
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  42119227 ggcctattagggg-gtaaatcaaaacaaaaatatttta 42119263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 360 - 388
Target Start/End: Original strand, 10976686 - 10976714
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||    
T  10976686 cctattaggggggtaaatcaaaacaaaaa 10976714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 18454314 - 18454277
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18454314 ggcctattaggggggtaaatcaaaacaaaaatatttta 18454277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 45900722 - 45900759
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  45900722 ggcctattaggggggtaaatcaaaacaaaaatatttta 45900759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 6439303 - 6439268
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||    
T  6439303 cctattaggggggtaaatcaaaacaaaaatatttta 6439268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 393
Target Start/End: Complemental strand, 11563412 - 11563377
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatattt 393  Q
    ||||||||||||||||||||||||||||||||||||    
T  11563412 ggcctattaggggggtaaatcaaaacaaaaatattt 11563377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 1386175 - 1386212
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||| |||||||||||||||||    
T  1386175 ggcctattaggggggtaaattaaaacaaaaatatttta 1386212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 16493638 - 16493601
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  16493638 ggcctattaagggggtaaatcaaaacaaaaatatttta 16493601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 17289913 - 17289950
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  17289913 ggcctattaggggcgtaaatcaaaacaaaaatatttta 17289950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 18320633 - 18320670
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  18320633 ggcctattaggggggtaaatcaagacaaaaatatttta 18320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 51965490 - 51965453
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||||||||    
T  51965490 ggcctattagggaggtaaatcaaaacaaaaatatttta 51965453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 53231893 - 53231857
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||| |||||||||||||||||    
T  53231893 gcctattaggggggtaaatgaaaacaaaaatatttta 53231857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 10682800 - 10682765
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10682800 cctattaagggggtaaatcaaaacaaaaatatttta 10682765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 10718027 - 10717992
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10718027 cctattaagggggtaaatcaaaacaaaaatatttta 10717992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 10896440 - 10896405
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10896440 cctattaagggggtaaatcaaaacaaaaatatttta 10896405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 10931796 - 10931761
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| ||||||||||||||||||||||||||||    
T  10931796 cctattaagggggtaaatcaaaacaaaaatatttta 10931761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 16482226 - 16482261
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16482226 cctattatgggggtaaatcaaaacaaaaatatttta 16482261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 16493660 - 16493695
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16493660 cctattaagggggtaaatcaaaacaaaaatatttta 16493695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 5401883 - 5401853
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  5401883 ggcctattaggggggtaaatcaaaacaaaaa 5401853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 361 - 391
Target Start/End: Complemental strand, 16482172 - 16482142
Alignment:
Q  361 ctattaggggggtaaatcaaaacaaaaatat 391  Q
    |||||||||||||||||||||||||||||||    
T  16482172 ctattaggggggtaaatcaaaacaaaaatat 16482142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 9791582 - 9791618
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  9791582 ggcctattagggg-gtaaatcaaaacaaaaatatttta 9791618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 11563464 - 11563501
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  11563464 ggcctaataggagggtaaatcaaaacaaaaatatttta 11563501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 13334943 - 13334907
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  13334943 ggcctattaggggg-taaatcaaaacaaaaatatttta 13334907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 15157012 - 15157049
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  15157012 ggcctattaaggggttaaatcaaaacaaaaatatttta 15157049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 17289862 - 17289826
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  17289862 ggcctattaggggg-taaatcaaaacaaaaatatttta 17289826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 18320582 - 18320545
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  18320582 ggcctattaggagagtaaatcaaaacaaaaatatttta 18320545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 21798452 - 21798416
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  21798452 ggcctattaggggg-taaatcaaaacaaaaatatttta 21798416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 21798504 - 21798540
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||| |||||||||||||||||||    
T  21798504 ggcctattaggggggtaa-tcaaaacaaaaatatttta 21798540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 43751217 - 43751253
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  43751217 ggcctattagggg-gtaaatcaaaacaaaaatatttta 43751253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 44519631 - 44519667
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  44519631 ggcctattagggg-gtaaatcaaaacaaaaatatttta 44519667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 56216882 - 56216918
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  56216882 ggcctattagggg-gtaaatcaaaacaaaaatatttta 56216918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 56467533 - 56467497
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  56467533 ggcctattaggggg-taaatcaaaacaaaaatatttta 56467497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 56467585 - 56467621
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  56467585 ggcctattagggg-gtaaatcaaaacaaaaatatttta 56467621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 367 - 395
Target Start/End: Complemental strand, 9001555 - 9001527
Alignment:
Q  367 ggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||    
T  9001555 ggggggtaaatcaaaacaaaaatatttta 9001527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 3548242 - 3548205
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3548242 ggcctattaggggggtaaatcaaaacaaaaatatttta 3548205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 3548292 - 3548329
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3548292 ggcctattaggggggtaaatcaaaacaaaaatatttta 3548329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 8355503 - 8355540
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8355503 ggcctattaggggggtaaatcaaaacaaaaatatttta 8355540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 27432756 - 27432793
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27432756 ggcctattaggggggtaaatcaaaacaaaaatatttta 27432793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 30271664 - 30271627
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30271664 ggcctattaggggggtaaatcaaaacaaaaatatttta 30271627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 49872886 - 49872923
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49872886 ggcctattaggggggtaaatcaaaacaaaaatatttta 49872923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 51252169 - 51252132
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51252169 ggcctattaggggggtaaatcaaaacaaaaatatttta 51252132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 361 - 395
Target Start/End: Complemental strand, 30586281 - 30586247
Alignment:
Q  361 ctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||||||||    
T  30586281 ctattaggggggtaaatcaaaacaaaaatatttta 30586247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 19623947 - 19623984
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  19623947 ggcctattaggcgggtaaatcaaaacaaaaatatttta 19623984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 25109999 - 25110036
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  25109999 ggcctattaggagggtaaatcaaaacaaaaatatttta 25110036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 29313906 - 29313869
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||||| |||||    
T  29313906 ggcctattaggggggtaaatcaaaacaaaaatgtttta 29313869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 30271715 - 30271752
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  30271715 ggcctcttaggggggtaaatcaaaacaaaaatatttta 30271752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 30586334 - 30586371
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30586334 ggcctattaggagggtaaatcaaaacaaaaatatttta 30586371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 51252220 - 51252257
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||||||||    
T  51252220 ggcctattagggaggtaaatcaaaacaaaaatatttta 51252257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 22949365 - 22949330
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||| |||||||||||||||||||||||||||    
T  22949365 cctattagcggggtaaatcaaaacaaaaatatttta 22949330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 32012013 - 32012048
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||| ||||||||||||||||||||||||||||    
T  32012013 cctattatgggggtaaatcaaaacaaaaatatttta 32012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 36867754 - 36867719
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||| |||||||||||||||||    
T  36867754 cctattaggggggtaaatgaaaacaaaaatatttta 36867719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 360 - 395
Target Start/End: Original strand, 43767831 - 43767866
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||| |||||||||||||||||||||||||||    
T  43767831 cctattagaggggtaaatcaaaacaaaaatatttta 43767866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 5205290 - 5205320
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  5205290 ggcctattaggggggtaaatcaaaacaaaaa 5205320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 27521643 - 27521613
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  27521643 ggcctattaggggggtaaatcaaaacaaaaa 27521613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 49880624 - 49880594
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  49880624 ggcctattaggggggtaaatcaaaacaaaaa 49880594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 5416180 - 5416144
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  5416180 ggcctattaggggg-taaatcaaaacaaaaatatttta 5416144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 7584366 - 7584330
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  7584366 ggcctattaggggg-taaatcaaaacaaaaatatttta 7584330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 10979965 - 10979929
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  10979965 ggcctattaggggg-taaatcaaaacaaaaatatttta 10979929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 12767105 - 12767141
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12767105 ggcctattagggg-gtaaatcaaaacaaaaatatttta 12767141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 387
Target Start/End: Complemental strand, 20957068 - 20957039
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaa 387  Q
    ||||||||||||||||||||||||||||||    
T  20957068 ggcctattaggggggtaaatcaaaacaaaa 20957039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 27760409 - 27760372
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  27760409 ggcctattaagagggtaaatcaaaacaaaaatatttta 27760372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 27760459 - 27760495
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27760459 ggcctattagggg-gtaaatcaaaacaaaaatatttta 27760495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 46902040 - 46902077
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| || |||||||||||||||||||||||||    
T  46902040 ggcctattacggtggtaaatcaaaacaaaaatatttta 46902077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 367 - 395
Target Start/End: Original strand, 22949428 - 22949456
Alignment:
Q  367 ggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||    
T  22949428 ggggggtaaatcaaaacaaaaatatttta 22949456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 49872834 - 49872799
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| |||||||||||||||||||||||    
T  49872834 gcctattaggggg-taaatcaaaacaaaaatatttta 49872799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 25227945 - 25227908
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25227945 ggcctattaggggggtaaatcaaaacaaaaatatttta 25227908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 28149554 - 28149517
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28149554 ggcctattaggggggtaaatcaaaacaaaaatatttta 28149517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 28484479 - 28484442
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28484479 ggcctattaggggggtaaatcaaaacaaaaatatttta 28484442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 37147671 - 37147634
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37147671 ggcctattaggggggtaaatcaaaacaaaaatatttta 37147634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 395
Target Start/End: Complemental strand, 16577233 - 16577198
Alignment:
Q  360 cctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||||    
T  16577233 cctattaggggggtaaatcaaaacaaaaatatttta 16577198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 3364498 - 3364535
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||||||||    
T  3364498 ggcctattagggaggtaaatcaaaacaaaaatatttta 3364535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 9011921 - 9011958
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  9011921 ggcctattaggggggtaaaccaaaacaaaaatatttta 9011958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 12693695 - 12693658
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12693695 ggcctattaggggggtaaatcaaaacaaaaatacttta 12693658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 22535620 - 22535657
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||||| |||||    
T  22535620 ggcctattaggggggtaaatcaaaacaaaaatgtttta 22535657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 25227995 - 25228032
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25227995 ggcctattaggggggtaattcaaaacaaaaatatttta 25228032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 362 - 395
Target Start/End: Complemental strand, 30371501 - 30371468
Alignment:
Q  362 tattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||||||||||||||||||||||||    
T  30371501 tattaggggggtaaatcaaaacaaaaatatttta 30371468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 37147722 - 37147759
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||||||||    
T  37147722 ggcctattagggaggtaaatcaaaacaaaaatatttta 37147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 38386099 - 38386136
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||||||||    
T  38386099 ggcctattagggaggtaaatcaaaacaaaaatatttta 38386136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 18555698 - 18555668
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  18555698 ggcctattaggggggtaaatcaaaacaaaaa 18555668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 365 - 395
Target Start/End: Complemental strand, 23260432 - 23260402
Alignment:
Q  365 taggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||||    
T  23260432 taggggggtaaatcaaaacaaaaatatttta 23260402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 34635827 - 34635797
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  34635827 ggcctattaggggggtaaatcaaaacaaaaa 34635797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 34635878 - 34635908
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  34635878 ggcctattaggggggtaaatcaaaacaaaaa 34635908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 1499005 - 1498969
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  1499005 ggcctattaggggg-taaatcaaaacaaaaatatttta 1498969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 3364446 - 3364409
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  3364446 ggcctattagggtggtaaatcaaaacaaaaatacttta 3364409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 17328262 - 17328299
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| | |||||||||||||||||||||||||    
T  17328262 ggcctattagagaggtaaatcaaaacaaaaatatttta 17328299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 25927003 - 25926967
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  25927003 ggcctattaggggg-taaatcaaaacaaaaatatttta 25926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 29098186 - 29098223
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  29098186 ggcctattagggaggtaaatgaaaacaaaaatatttta 29098223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 391
Target Start/End: Original strand, 30371549 - 30371582
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatat 391  Q
    ||||||||||||||||||||| ||||||||||||    
T  30371549 ggcctattaggggggtaaatcgaaacaaaaatat 30371582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 39227913 - 39227877
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  39227913 ggcctattaggggg-taaatcaaaacaaaaatatttta 39227877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 39227964 - 39228001
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| || ||||||||||||||||||||||||    
T  39227964 ggcctattagaggagtaaatcaaaacaaaaatatttta 39228001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 387
Target Start/End: Complemental strand, 34428757 - 34428729
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaa 387  Q
    |||||||||||||||||||||||||||||    
T  34428757 gcctattaggggggtaaatcaaaacaaaa 34428729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 358 - 386
Target Start/End: Original strand, 43302051 - 43302079
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaa 386  Q
    |||||||||||||||||||||||||||||    
T  43302051 ggcctattaggggggtaaatcaaaacaaa 43302079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 359 - 395
Target Start/End: Original strand, 1996 - 2032
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||||||||||    
T  1996 gcctattaggggggtaaatcaaaacaaaaatatttta 2032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 3766 - 3729
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3766 ggcctattagaggggtaaatcaaaacaaaaatatttta 3729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 4367 - 4404
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||||||||||||||||||| |||||||    
T  4367 ggcctattaggggggtaaatcaaaacaaaattatttta 4404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 6915 - 6952
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  6915 ggcctattaagggggtaaatcaaaacaaaaatatttta 6952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Complemental strand, 4036 - 4006
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  4036 ggcctattaggggggtaaatcaaaacaaaaa 4006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 358 - 388
Target Start/End: Original strand, 4087 - 4117
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaa 388  Q
    |||||||||||||||||||||||||||||||    
T  4087 ggcctattaggggggtaaatcaaaacaaaaa 4117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 3886 - 3849
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||| || |||||||||||||||||||||||||    
T  3886 ggcctattatggaggtaaatcaaaacaaaaatatttta 3849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Original strand, 3936 - 3972
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  3936 ggcctattagggg-gtaaatcaaaacaaaaatatttta 3972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 395
Target Start/End: Complemental strand, 951 - 915
Alignment:
Q  358 ggcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    |||||||||||||| |||||||||||||||||||||||    
T  951 ggcctattaggggg-taaatcaaaacaaaaatatttta 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 359 - 395
Target Start/End: Complemental strand, 38167 - 38132
Alignment:
Q  359 gcctattaggggggtaaatcaaaacaaaaatatttta 395  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38167 gcctattaggggg-taaatcaaaacaaaaatatttta 38132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University