View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20321_high_61 (Length: 293)
Name: NF20321_high_61
Description: NF20321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20321_high_61 |
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Alignment Details
Target: chr3 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 29358264 - 29358527
Alignment:
| Q |
14 |
agagggtgctgagttcactaacctttttcattagacctttcttccttttcttgaacgtcgccttcctcgcggagtcgttgattatgaatgcgagtttcac |
113 |
Q |
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| T |
29358264 |
agagggtgctgagttcactaacctttttcattagacctttcttccttttcttgaacgtcgccttcctcgcggagtcgttgattatgaatgcgagtttcac |
29358363 |
T |
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| Q |
114 |
cttttttctagtcatggtggtggtgatgaagaggaacagaaagaacaatctcttgtttatatagattgtttgagatgattgataggtaagtccttgctgg |
213 |
Q |
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| T |
29358364 |
cttttttctagtcatggtggtggtgatgaagaggaacagaaagaacaatctcttatttatatagattgtttgagatgattgataggtaagtccttgctgg |
29358463 |
T |
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| Q |
214 |
aagcattagcatgacatattcaaagccaaatatttgtgctatgaatttagagatgtcaaattta |
277 |
Q |
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| T |
29358464 |
aagcattagcatgacacattcaaagccaaatatttgtgctatgaatttagagatgtcaaattta |
29358527 |
T |
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