View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20321_low_2 (Length: 756)

Name: NF20321_low_2
Description: NF20321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20321_low_2
NF20321_low_2
[»] chr3 (95 HSPs)
chr3 (15-415)||(49074511-49074911)
chr3 (452-593)||(12838079-12838220)
chr3 (455-594)||(21969188-21969327)
chr3 (455-594)||(21991624-21991763)
chr3 (455-594)||(25488372-25488511)
chr3 (455-594)||(25561012-25561151)
chr3 (455-594)||(26906455-26906594)
chr3 (455-594)||(36278787-36278926)
chr3 (455-594)||(45487800-45487939)
chr3 (455-594)||(3970522-3970661)
chr3 (455-593)||(43639112-43639251)
chr3 (452-594)||(32237422-32237564)
chr3 (455-594)||(4072304-4072444)
chr3 (455-594)||(13078194-13078333)
chr3 (452-594)||(39850372-39850515)
chr3 (456-594)||(43150481-43150619)
chr3 (455-591)||(8831744-8831881)
chr3 (455-598)||(10254565-10254709)
chr3 (455-599)||(12789602-12789746)
chr3 (455-594)||(10441289-10441428)
chr3 (619-730)||(49074930-49075041)
chr3 (466-592)||(45712945-45713071)
chr3 (455-594)||(25446252-25446390)
chr3 (455-594)||(36657464-36657603)
chr3 (455-594)||(36822791-36822930)
chr3 (452-594)||(55340321-55340464)
chr3 (466-588)||(44611423-44611545)
chr3 (476-598)||(10017111-10017233)
chr3 (459-594)||(404045-404181)
chr3 (455-598)||(10117512-10117651)
chr3 (455-566)||(22101193-22101305)
chr3 (455-582)||(50099445-50099574)
chr3 (455-591)||(1476582-1476718)
chr3 (455-594)||(5529892-5530032)
chr3 (489-594)||(36329245-36329350)
chr3 (455-566)||(22176137-22176249)
chr3 (455-594)||(13724019-13724158)
chr3 (455-591)||(42105414-42105550)
chr3 (495-594)||(38125250-38125349)
chr3 (455-594)||(44920677-44920815)
chr3 (466-594)||(157010-157139)
chr3 (455-591)||(26976873-26977009)
chr3 (452-591)||(37506155-37506293)
chr3 (452-533)||(35368795-35368876)
chr3 (487-594)||(46664177-46664284)
chr3 (455-564)||(26977721-26977830)
chr3 (452-591)||(46222056-46222196)
chr3 (466-528)||(46679328-46679390)
chr3 (537-594)||(36657434-36657491)
chr3 (455-576)||(37536889-37537010)
chr3 (542-598)||(10254687-10254743)
chr3 (542-594)||(21969158-21969210)
chr3 (542-594)||(21991594-21991646)
chr3 (542-594)||(22176227-22176279)
chr3 (538-594)||(35368550-35368606)
chr3 (538-594)||(36822761-36822817)
chr3 (542-594)||(45487917-45487969)
chr3 (542-594)||(50099552-50099604)
chr3 (537-594)||(10441259-10441316)
chr3 (542-594)||(3970492-3970544)
chr3 (542-594)||(4072274-4072326)
chr3 (542-598)||(8831859-8831915)
chr3 (542-594)||(10117629-10117681)
chr3 (542-594)||(13078164-13078216)
chr3 (548-596)||(13723987-13724035)
chr3 (466-550)||(39677316-39677400)
chr3 (538-594)||(39850345-39850401)
chr3 (547-598)||(10017232-10017283)
chr3 (542-593)||(32237396-32237447)
chr3 (455-525)||(49984001-49984071)
chr3 (455-591)||(297568-297702)
chr3 (542-594)||(12789724-12789776)
chr3 (542-594)||(22101283-22101335)
chr3 (542-594)||(25446368-25446419)
chr3 (542-594)||(26906572-26906624)
chr3 (542-594)||(36278757-36278809)
chr3 (528-594)||(32362862-32362928)
chr3 (542-591)||(297541-297590)
chr3 (550-591)||(1476555-1476596)
chr3 (542-594)||(25488342-25488394)
chr3 (542-594)||(25561129-25561181)
chr3 (542-594)||(26976843-26976895)
chr3 (542-594)||(44611383-44611434)
chr3 (542-594)||(45712904-45712956)
chr3 (502-564)||(24435620-24435682)
chr3 (538-591)||(5530006-5530059)
chr3 (542-594)||(26977808-26977860)
chr3 (469-533)||(32363116-32363180)
chr3 (542-594)||(35368851-35368903)
chr3 (542-594)||(36329189-36329241)
chr3 (546-594)||(43639082-43639130)
chr3 (542-594)||(46679379-46679431)
chr3 (466-568)||(19953873-19953975)
chr3 (455-532)||(4567244-4567321)
chr3 (542-591)||(42105387-42105436)
[»] scaffold0122 (2 HSPs)
scaffold0122 (455-594)||(45835-45974)
scaffold0122 (542-594)||(45952-46004)
[»] chr6 (43 HSPs)
chr6 (455-594)||(885386-885525)
chr6 (455-594)||(21379972-21380111)
chr6 (455-598)||(8091059-8091202)
chr6 (455-594)||(15546633-15546772)
chr6 (452-594)||(13439696-13439839)
chr6 (455-594)||(3368986-3369125)
chr6 (452-594)||(4890508-4890651)
chr6 (455-594)||(11687174-11687313)
chr6 (455-597)||(7808607-7808749)
chr6 (455-594)||(20501707-20501846)
chr6 (455-582)||(14393574-14393704)
chr6 (452-593)||(18998145-18998286)
chr6 (455-591)||(29609005-29609141)
chr6 (451-592)||(13172601-13172742)
chr6 (452-591)||(31764353-31764492)
chr6 (455-594)||(4238853-4238994)
chr6 (457-593)||(17279526-17279665)
chr6 (538-596)||(7808723-7808781)
chr6 (537-594)||(11687144-11687201)
chr6 (542-594)||(14393682-14393734)
chr6 (542-594)||(21379942-21379994)
chr6 (542-594)||(8091180-8091232)
chr6 (542-594)||(15546750-15546802)
chr6 (542-594)||(885503-885555)
chr6 (542-594)||(4890481-4890533)
chr6 (542-594)||(6433691-6433743)
chr6 (455-500)||(6433752-6433797)
chr6 (538-591)||(20501820-20501872)
chr6 (542-590)||(4238972-4239020)
chr6 (502-591)||(34522338-34522426)
chr6 (544-594)||(17367065-17367115)
chr6 (504-597)||(4076631-4076723)
chr6 (542-591)||(29609119-29609168)
chr6 (542-594)||(13172575-13172627)
chr6 (542-594)||(13439814-13439866)
chr6 (542-594)||(18998118-18998169)
chr6 (504-562)||(7441753-7441809)
chr6 (502-591)||(1681140-1681230)
chr6 (455-525)||(2599087-2599156)
chr6 (526-591)||(4179128-4179192)
chr6 (565-594)||(5416655-5416684)
chr6 (469-565)||(7187594-7187688)
chr6 (484-525)||(17367117-17367158)
[»] chr4 (59 HSPs)
chr4 (455-594)||(1298913-1299052)
chr4 (455-594)||(18417658-18417797)
chr4 (455-595)||(42274523-42274664)
chr4 (455-594)||(530700-530839)
chr4 (452-594)||(23928595-23928737)
chr4 (455-594)||(20435171-20435310)
chr4 (455-594)||(13204378-13204517)
chr4 (460-594)||(4552786-4552920)
chr4 (455-594)||(24969572-24969714)
chr4 (455-594)||(27434611-27434750)
chr4 (455-594)||(32318751-32318890)
chr4 (455-594)||(55107525-55107664)
chr4 (452-594)||(35360678-35360819)
chr4 (455-596)||(4688278-4688420)
chr4 (455-594)||(24915825-24915968)
chr4 (487-594)||(52824240-52824347)
chr4 (469-594)||(28809891-28810017)
chr4 (466-594)||(4894970-4895101)
chr4 (452-569)||(24294493-24294610)
chr4 (455-565)||(21048736-21048845)
chr4 (458-592)||(56552064-56552198)
chr4 (455-591)||(2272371-2272506)
chr4 (455-591)||(3422460-3422596)
chr4 (452-591)||(16995582-16995721)
chr4 (491-594)||(52587382-52587480)
chr4 (455-591)||(47465016-47465151)
chr4 (455-532)||(55049431-55049508)
chr4 (542-594)||(530670-530722)
chr4 (542-598)||(4688244-4688300)
chr4 (542-594)||(18417775-18417827)
chr4 (542-594)||(24915795-24915847)
chr4 (542-594)||(55107642-55107694)
chr4 (455-533)||(9355584-9355662)
chr4 (542-595)||(32318720-32318773)
chr4 (542-594)||(1299030-1299082)
chr4 (542-594)||(27434728-27434780)
chr4 (542-594)||(42274493-42274545)
chr4 (542-593)||(24969543-24969594)
chr4 (540-593)||(37525059-37525112)
chr4 (542-594)||(4552903-4552955)
chr4 (542-594)||(21048706-21048758)
chr4 (542-594)||(43486201-43486253)
chr4 (542-594)||(55049401-55049453)
chr4 (469-591)||(19600985-19601107)
chr4 (450-550)||(1051198-1051296)
chr4 (538-591)||(42020204-42020257)
chr4 (542-594)||(3422430-3422482)
chr4 (542-594)||(13204495-13204547)
chr4 (542-594)||(20435141-20435193)
chr4 (538-594)||(28573948-28574004)
chr4 (542-594)||(28809847-28809899)
chr4 (542-593)||(36030941-36030992)
chr4 (542-591)||(9355557-9355606)
chr4 (542-594)||(23928569-23928620)
chr4 (502-557)||(23481999-23482054)
chr4 (491-525)||(36030997-36031031)
chr4 (455-497)||(43486231-43486273)
chr4 (542-590)||(24294585-24294636)
chr4 (514-591)||(36860661-36860738)
[»] chr1 (89 HSPs)
chr1 (455-594)||(5189470-5189609)
chr1 (455-594)||(19954942-19955081)
chr1 (455-594)||(42561326-42561465)
chr1 (455-594)||(9978082-9978222)
chr1 (455-594)||(2854563-2854702)
chr1 (455-594)||(23698533-23698672)
chr1 (455-594)||(27240955-27241094)
chr1 (456-594)||(14387047-14387185)
chr1 (455-594)||(3607760-3607899)
chr1 (455-594)||(48954245-48954384)
chr1 (455-594)||(15324627-15324767)
chr1 (455-594)||(47940601-47940741)
chr1 (455-594)||(6079385-6079524)
chr1 (455-594)||(19797012-19797151)
chr1 (455-594)||(50627132-50627271)
chr1 (455-594)||(4299423-4299565)
chr1 (455-598)||(51276726-51276869)
chr1 (455-594)||(27926282-27926422)
chr1 (455-594)||(40647117-40647258)
chr1 (454-593)||(50162568-50162708)
chr1 (455-594)||(27928329-27928468)
chr1 (455-594)||(2125101-2125240)
chr1 (455-599)||(51789628-51789770)
chr1 (455-594)||(1387781-1387918)
chr1 (452-566)||(957617-957732)
chr1 (455-573)||(26208446-26208565)
chr1 (455-594)||(48645045-48645183)
chr1 (481-594)||(9895254-9895367)
chr1 (452-594)||(21930381-21930521)
chr1 (455-563)||(27670175-27670283)
chr1 (466-591)||(22339026-22339151)
chr1 (451-591)||(28243957-28244096)
chr1 (454-591)||(28431732-28431871)
chr1 (468-564)||(29598354-29598450)
chr1 (455-533)||(50856352-50856430)
chr1 (452-533)||(49284322-49284403)
chr1 (527-594)||(49285078-49285145)
chr1 (466-559)||(2302439-2302532)
chr1 (505-590)||(16755229-16755315)
chr1 (542-594)||(27240925-27240977)
chr1 (538-594)||(36880625-36880681)
chr1 (455-522)||(36880584-36880651)
chr1 (451-562)||(39015220-39015331)
chr1 (538-596)||(19796980-19797038)
chr1 (461-591)||(35547737-35547867)
chr1 (521-594)||(36880290-36880363)
chr1 (537-594)||(50627244-50627301)
chr1 (542-594)||(1387896-1387948)
chr1 (542-598)||(3607726-3607782)
chr1 (455-591)||(16518329-16518468)
chr1 (542-594)||(29598455-29598507)
chr1 (542-594)||(47940571-47940623)
chr1 (543-594)||(25297966-25298017)
chr1 (504-591)||(28447953-28448040)
chr1 (542-591)||(27928302-27928351)
chr1 (542-594)||(2854533-2854585)
chr1 (542-594)||(19954912-19954964)
chr1 (542-594)||(23698503-23698555)
chr1 (542-594)||(27926252-27926304)
chr1 (452-524)||(36007848-36007920)
chr1 (542-594)||(40647236-40647288)
chr1 (542-594)||(42561296-42561348)
chr1 (542-594)||(48954215-48954267)
chr1 (542-594)||(51789598-51789650)
chr1 (465-591)||(5059603-5059727)
chr1 (542-593)||(5189587-5189638)
chr1 (542-593)||(14387017-14387068)
chr1 (484-554)||(18651310-18651380)
chr1 (452-533)||(48958235-48958315)
chr1 (542-591)||(49284298-49284347)
chr1 (542-594)||(362475-362527)
chr1 (542-594)||(9978052-9978104)
chr1 (542-594)||(21930496-21930548)
chr1 (542-594)||(26208543-26208595)
chr1 (542-594)||(50162539-50162591)
chr1 (542-593)||(15324745-15324796)
chr1 (536-591)||(28823217-28823272)
chr1 (486-591)||(32029579-32029685)
chr1 (542-591)||(16518302-16518351)
chr1 (455-491)||(362461-362497)
chr1 (542-594)||(2125071-2125123)
chr1 (460-564)||(10262411-10262515)
chr1 (542-594)||(51276696-51276748)
chr1 (454-564)||(3767687-3767796)
chr1 (548-594)||(25297923-25297968)
chr1 (542-591)||(957707-957756)
chr1 (542-594)||(27670261-27670314)
chr1 (539-591)||(46691208-46691261)
chr1 (542-591)||(50856325-50856374)
[»] chr7 (68 HSPs)
chr7 (455-594)||(24836021-24836160)
chr7 (455-594)||(30259097-30259236)
chr7 (455-594)||(30594694-30594833)
chr7 (455-594)||(20184269-20184409)
chr7 (455-594)||(34052280-34052419)
chr7 (455-594)||(31231645-31231786)
chr7 (455-594)||(3953073-3953212)
chr7 (455-594)||(10936501-10936640)
chr7 (455-600)||(35339309-35339454)
chr7 (452-594)||(12142193-12142336)
chr7 (455-594)||(38883222-38883361)
chr7 (455-594)||(45997539-45997678)
chr7 (451-594)||(39617868-39618011)
chr7 (455-594)||(37093769-37093908)
chr7 (455-594)||(9285745-9285884)
chr7 (455-594)||(9289812-9289951)
chr7 (454-594)||(29277839-29277978)
chr7 (455-599)||(48103364-48103505)
chr7 (452-594)||(25742463-25742601)
chr7 (455-564)||(40358146-40358255)
chr7 (504-595)||(35665696-35665787)
chr7 (478-594)||(38528464-38528582)
chr7 (455-594)||(39143743-39143876)
chr7 (455-594)||(31521556-31521690)
chr7 (454-591)||(16876486-16876623)
chr7 (487-594)||(47237488-47237598)
chr7 (454-591)||(33749648-33749785)
chr7 (455-565)||(24123786-24123898)
chr7 (460-576)||(7955000-7955116)
chr7 (542-594)||(31231615-31231667)
chr7 (528-598)||(38528387-38528457)
chr7 (537-594)||(38883334-38883391)
chr7 (542-594)||(24836138-24836190)
chr7 (542-594)||(35339279-35339331)
chr7 (538-594)||(35665634-35665690)
chr7 (452-591)||(22723254-22723396)
chr7 (543-594)||(33721828-33721879)
chr7 (484-591)||(40596746-40596852)
chr7 (542-594)||(20184239-20184291)
chr7 (542-594)||(34052397-34052449)
chr7 (455-533)||(10398381-10398459)
chr7 (542-591)||(30259070-30259119)
chr7 (542-594)||(9285715-9285767)
chr7 (542-594)||(9289782-9289834)
chr7 (542-594)||(10936471-10936523)
chr7 (538-594)||(24123756-24123812)
chr7 (542-594)||(45997509-45997561)
chr7 (542-594)||(48103483-48103535)
chr7 (542-592)||(30594811-30594861)
chr7 (542-594)||(3953043-3953095)
chr7 (550-594)||(17101655-17101699)
chr7 (550-594)||(17101700-17101744)
chr7 (471-558)||(1072271-1072358)
chr7 (482-576)||(1402937-1403032)
chr7 (454-553)||(32482244-32482343)
chr7 (466-520)||(44148722-44148776)
chr7 (542-591)||(10398437-10398486)
chr7 (547-596)||(11486863-11486912)
chr7 (454-591)||(38989101-38989241)
chr7 (542-595)||(39143712-39143765)
chr7 (542-594)||(25742436-25742488)
chr7 (542-594)||(39617842-39617894)
chr7 (542-594)||(47237434-47237485)
chr7 (516-572)||(4453188-4453246)
chr7 (482-524)||(25572883-25572925)
chr7 (505-554)||(28723567-28723616)
chr7 (542-595)||(31521526-31521578)
chr7 (542-594)||(40358233-40358288)
[»] chr8 (46 HSPs)
chr8 (451-594)||(8210324-8210467)
chr8 (455-594)||(15882201-15882341)
chr8 (455-594)||(23940835-23940975)
chr8 (451-595)||(37114238-37114382)
chr8 (455-599)||(38520014-38520158)
chr8 (455-594)||(29780990-29781129)
chr8 (455-594)||(17426659-17426800)
chr8 (452-594)||(38629475-38629617)
chr8 (455-572)||(40891036-40891153)
chr8 (455-594)||(12234467-12234607)
chr8 (455-594)||(24211309-24211448)
chr8 (455-598)||(33100676-33100819)
chr8 (452-594)||(11828624-11828773)
chr8 (455-591)||(35467175-35467310)
chr8 (455-558)||(4262007-4262110)
chr8 (452-591)||(38405142-38405282)
chr8 (504-594)||(4035742-4035832)
chr8 (455-583)||(24741854-24741982)
chr8 (455-591)||(14834703-14834838)
chr8 (461-558)||(40393760-40393856)
chr8 (542-594)||(15882319-15882371)
chr8 (538-594)||(33100646-33100702)
chr8 (542-593)||(40891131-40891182)
chr8 (484-566)||(10778686-10778768)
chr8 (455-595)||(5356154-5356295)
chr8 (542-591)||(24741827-24741876)
chr8 (542-594)||(17426629-17426681)
chr8 (542-594)||(38629592-38629644)
chr8 (542-594)||(24211279-24211331)
chr8 (542-591)||(14834676-14834725)
chr8 (542-591)||(29780963-29781012)
chr8 (542-591)||(35467288-35467337)
chr8 (542-594)||(12234585-12234637)
chr8 (542-598)||(37114356-37114412)
chr8 (542-594)||(38520136-38520188)
chr8 (474-525)||(25264277-25264328)
chr8 (486-591)||(33390652-33390755)
chr8 (466-573)||(32996461-32996570)
chr8 (542-582)||(4261989-4262029)
chr8 (546-594)||(8210445-8210493)
chr8 (542-594)||(23940805-23940857)
chr8 (538-594)||(38515618-38515674)
chr8 (461-564)||(7959857-7959962)
chr8 (565-594)||(4036570-4036599)
chr8 (455-521)||(9775229-9775297)
chr8 (542-591)||(38405257-38405305)
[»] chr2 (53 HSPs)
chr2 (455-594)||(45408626-45408765)
chr2 (452-590)||(2818671-2818809)
chr2 (455-594)||(9281378-9281517)
chr2 (455-594)||(24101863-24102002)
chr2 (455-594)||(1924011-1924151)
chr2 (455-596)||(7737063-7737205)
chr2 (455-594)||(3116877-3117016)
chr2 (455-594)||(16705734-16705873)
chr2 (452-594)||(34455886-34456028)
chr2 (455-594)||(23835877-23836017)
chr2 (455-594)||(9933600-9933739)
chr2 (455-594)||(12850573-12850712)
chr2 (455-594)||(27920574-27920712)
chr2 (455-594)||(34490457-34490596)
chr2 (452-599)||(42713805-42713953)
chr2 (455-594)||(22269723-22269862)
chr2 (455-594)||(20892885-20893025)
chr2 (452-593)||(43475946-43476089)
chr2 (454-594)||(29229393-29229533)
chr2 (454-594)||(29342693-29342833)
chr2 (455-594)||(6605739-6605874)
chr2 (455-594)||(9850789-9850923)
chr2 (451-591)||(7116374-7116514)
chr2 (454-591)||(39243013-39243150)
chr2 (451-545)||(40362533-40362626)
chr2 (538-594)||(34490570-34490626)
chr2 (502-583)||(17434758-17434840)
chr2 (542-594)||(24101833-24101885)
chr2 (542-594)||(1923981-1924033)
chr2 (542-594)||(7737183-7737235)
chr2 (542-594)||(45408743-45408795)
chr2 (548-594)||(6605858-6605904)
chr2 (540-594)||(22269838-22269892)
chr2 (542-594)||(2818784-2818836)
chr2 (542-594)||(3116994-3117046)
chr2 (542-594)||(10552999-10553051)
chr2 (542-594)||(16705851-16705903)
chr2 (452-540)||(17500034-17500122)
chr2 (542-594)||(43858552-43858604)
chr2 (543-594)||(8111692-8111743)
chr2 (452-490)||(10552986-10553024)
chr2 (482-591)||(22346432-22346542)
chr2 (542-591)||(12850546-12850595)
chr2 (542-594)||(9281348-9281400)
chr2 (538-594)||(20892999-20893054)
chr2 (542-594)||(27920690-27920742)
chr2 (542-594)||(43476064-43476116)
chr2 (536-591)||(37340970-37341025)
chr2 (542-594)||(9933571-9933622)
chr2 (542-594)||(42713778-42713830)
chr2 (452-525)||(25095801-25095875)
chr2 (544-594)||(29229362-29229414)
chr2 (544-594)||(29342662-29342714)
[»] scaffold0188 (2 HSPs)
scaffold0188 (455-594)||(7087-7226)
scaffold0188 (542-594)||(7204-7256)
[»] scaffold0107 (2 HSPs)
scaffold0107 (455-594)||(51064-51203)
scaffold0107 (542-594)||(51181-51233)
[»] chr5 (65 HSPs)
chr5 (455-594)||(1138560-1138699)
chr5 (452-594)||(4265983-4266125)
chr5 (460-593)||(24397282-24397415)
chr5 (455-594)||(15855844-15855983)
chr5 (455-594)||(35420643-35420782)
chr5 (452-594)||(13754319-13754461)
chr5 (455-591)||(16472959-16473095)
chr5 (455-594)||(20476432-20476571)
chr5 (455-594)||(21259761-21259900)
chr5 (452-572)||(12744849-12744969)
chr5 (452-594)||(12807913-12808054)
chr5 (455-594)||(33629376-33629517)
chr5 (466-591)||(8364672-8364797)
chr5 (455-568)||(21261970-21262083)
chr5 (452-594)||(43539109-43539250)
chr5 (466-594)||(37552350-37552472)
chr5 (466-594)||(37655194-37655315)
chr5 (455-591)||(35806939-35807075)
chr5 (455-591)||(780825-780959)
chr5 (450-591)||(18236470-18236613)
chr5 (461-559)||(1456059-1456157)
chr5 (474-594)||(1164845-1164966)
chr5 (474-594)||(19976262-19976383)
chr5 (452-538)||(32623243-32623329)
chr5 (470-591)||(35276338-35276460)
chr5 (461-589)||(2538402-2538530)
chr5 (537-594)||(15855956-15856013)
chr5 (537-594)||(16473068-16473125)
chr5 (537-594)||(35420613-35420670)
chr5 (542-594)||(20476549-20476601)
chr5 (504-591)||(42522900-42522987)
chr5 (452-564)||(5144459-5144570)
chr5 (542-594)||(33629346-33629398)
chr5 (505-564)||(12191423-12191482)
chr5 (486-564)||(735307-735385)
chr5 (540-593)||(2255578-2255631)
chr5 (542-591)||(32623219-32623268)
chr5 (542-594)||(1138677-1138729)
chr5 (542-594)||(2268723-2268775)
chr5 (542-594)||(4266100-4266152)
chr5 (455-511)||(21591244-21591300)
chr5 (455-511)||(21595361-21595417)
chr5 (520-591)||(10132286-10132357)
chr5 (541-580)||(20464014-20464053)
chr5 (542-596)||(4913267-4913321)
chr5 (541-594)||(2268173-2268226)
chr5 (542-591)||(10132372-10132421)
chr5 (542-594)||(13754292-13754344)
chr5 (542-594)||(21591214-21591266)
chr5 (542-594)||(21595331-21595383)
chr5 (542-594)||(37552309-37552361)
chr5 (542-594)||(43539225-43539277)
chr5 (455-510)||(2529066-2529121)
chr5 (454-573)||(10500099-10500218)
chr5 (552-594)||(17583367-17583409)
chr5 (543-592)||(25751570-25751619)
chr5 (483-591)||(10304715-10304823)
chr5 (542-581)||(21262061-21262100)
chr5 (547-594)||(29141806-29141853)
chr5 (542-592)||(12744944-12744994)
chr5 (542-592)||(12808029-12808079)
chr5 (548-594)||(21259731-21259777)
chr5 (504-545)||(2268672-2268713)
chr5 (542-583)||(2529099-2529140)
chr5 (549-594)||(37655139-37655184)
[»] scaffold0163 (2 HSPs)
scaffold0163 (455-594)||(1970-2110)
scaffold0163 (542-594)||(1940-1992)
[»] scaffold0137 (1 HSPs)
scaffold0137 (455-593)||(10118-10255)
[»] scaffold0086 (2 HSPs)
scaffold0086 (455-591)||(48130-48266)
scaffold0086 (542-596)||(48244-48298)
[»] scaffold0653 (2 HSPs)
scaffold0653 (455-594)||(3424-3563)
scaffold0653 (542-594)||(3394-3446)
[»] scaffold0118 (2 HSPs)
scaffold0118 (455-594)||(14443-14582)
scaffold0118 (542-596)||(14560-14614)
[»] scaffold0595 (2 HSPs)
scaffold0595 (455-594)||(5702-5845)
scaffold0595 (542-594)||(5823-5877)
[»] scaffold0006 (2 HSPs)
scaffold0006 (502-594)||(72349-72440)
scaffold0006 (542-594)||(72289-72341)
[»] scaffold0069 (1 HSPs)
scaffold0069 (538-594)||(26406-26462)
[»] scaffold0013 (1 HSPs)
scaffold0013 (461-558)||(94207-94306)
[»] scaffold0018 (2 HSPs)
scaffold0018 (455-542)||(138308-138395)
scaffold0018 (542-585)||(138287-138330)
[»] scaffold0391 (1 HSPs)
scaffold0391 (502-591)||(3663-3753)


Alignment Details
Target: chr3 (Bit Score: 385; Significance: 0; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 15 - 415
Target Start/End: Original strand, 49074511 - 49074911
Alignment:
Q  15 aaaatatgtacacaaacaactaagtatttgatttatcaatgttgtaactcctcaaagggctaaattgtctttaagaagacaatgtgacttagttaagtct 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49074511 aaaatatgtacacaaacaactaagtatttgatttatcaatgttgtaactcctcaaagggctaaattgtctttaagaagacaatgtgacttagttaagtct 49074610  T
Q  115 gatctttatagtaatatatctaaggtattttctgaaagatatgcatataccttagtgcttgtaatcggttggaagtatcgtggactccttgactttacta 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  49074611 gatctttatagtaatatatctaaggtattttctgaaagatatgcatataccttagtgcttgtaatcggttagaagtatcgtggactcgttgactttacta 49074710  T
Q  215 aggaaatactctttgtaaaaggaggattgggcataactgtctaagtttggagataaatcagtataaaactcaacatgtctttatctctatccatgtttct 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49074711 aggaaatactctttgtaaaaggaggattgggcataactgtctaagtttggagataaatcagtataaaactcaacgtgtctttatctctatccatgtttct 49074810  T
Q  315 ctttacttgacgttctatttaaataactctctttcaaagaagaaaaaggaaaacattttaaaatttatcatcattcaaacattcttttctcatgattttc 414  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49074811 ctttacttaacgttctatttaaataactctctttcaaagaagaaaaaggaaaacattttaaaatttatcatcattcaaacattcttttctcatgattttc 49074910  T
Q  415 t 415  Q
    |    
T  49074911 t 49074911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 452 - 593
Target Start/End: Complemental strand, 12838220 - 12838079
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12838220 tgtttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaag 12838121  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  12838120 aaccatacaaaaagcacctaaggaattgtacataagttttct 12838079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 21969188 - 21969327
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21969188 ttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 21969287  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  21969288 catacgaaaagcacctaaggaattgtacctaagttttctc 21969327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 21991624 - 21991763
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21991624 ttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 21991723  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  21991724 catacgaaaagcacctaaggaattgtacctaagttttctc 21991763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 25488372 - 25488511
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||  |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25488372 ttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 25488471  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25488472 catacaaaaagcacctaaggaattgtacctaagttttctc 25488511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 25561151 - 25561012
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||  |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25561151 ttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 25561052  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25561051 catacaaaaagcacctaaggaattgtacctaagttttctc 25561012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 26906594 - 26906455
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26906594 ttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 26906495  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  26906494 catacgaaaaggacctaaggaattgtacctaagttttctc 26906455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 36278787 - 36278926
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36278787 ttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 36278886  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  36278887 catacgaaaaggacctaaggaattgtacctaagttttctc 36278926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 45487939 - 45487800
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  45487939 ttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttatatccaaaaaatatgtatttttagttaagaac 45487840  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  45487839 catacgaaaagcacctaaggaattgtacctaagttttctc 45487800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 3970522 - 3970661
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3970522 ttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 3970621  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| ||||||| ||||||||||||||||||||    
T  3970622 catacgaaaagtacctaagaaattgtacctaagttttctc 3970661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 593
Target Start/End: Original strand, 43639112 - 43639251
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaa 553  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43639112 ttttcgtatgattcttaaccaaattcaccatgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaa 43639211  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
     ||||| |||||||||||||||||||||||||||||||||    
T  43639212 tcatacgaaaagcacctaaggaattgtacctaagttttct 43639251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 32237422 - 32237564
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| |||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  32237422 tgtttttcgtatggttcttaactaaatttaccatgattttctcagatccataattttctcaaagtttgttatatccaaaaaatatgtatttttaattaag 32237521  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  32237522 aaccatacgaaaagcacctaaggaattgtacctaagttttctc 32237564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 4072304 - 4072444
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaa 553  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  4072304 ttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 4072403  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  4072404 ccatacgaaaaacacctaaggaattgtacctaagttttctc 4072444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 13078194 - 13078333
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  13078194 ttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaat 13078293  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| ||||||| ||||||||||||||||||||    
T  13078294 catacgaaaagtacctaagaaattgtacctaagttttctc 13078333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 39850372 - 39850515
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctca-aagtttgttatatccaaaaaatatatatttttagttaa 550  Q
    ||||||||||||| ||||||||||||   |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39850372 tgtttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcacaagtttgttatatccaaaaaatatatatttttagttaa 39850471  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||    
T  39850472 gaatcatacgaaaagcacctaaggaattgtacctaagttttctc 39850515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 456 - 594
Target Start/End: Complemental strand, 43150619 - 43150481
Alignment:
Q  456 tttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 555  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  43150619 tttcgtatgattcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaacc 43150520  T
Q  556 atacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| |||||||||| |||||||| ||||||||||||||    
T  43150519 atacgaaaagcacctgaggaattgcacctaagttttctc 43150481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 455 - 591
Target Start/End: Complemental strand, 8831881 - 8831744
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaa 553  Q
    |||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  8831881 ttttcgtatggttcttaactaaattcaccatgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagtttagaa 8831782  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||| |||||||||||||||||||||||||||||||    
T  8831781 ccatacgaaaagcacctaaggaattgtacctaagtttt 8831744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 455 - 598
Target Start/End: Complemental strand, 10254709 - 10254565
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaa 553  Q
    |||||||||| |||||||||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||||||||||||    
T  10254709 ttttcgtatggttcttaactaaattcatcatgattttctcaaatccataattttttcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 10254610  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    |||||  ||||||||||||||||||||||||||||||||||||||    
T  10254609 ccatatgaaaagcacctaaggaattgtacctaagttttctctttt 10254565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 455 - 599
Target Start/End: Complemental strand, 12789746 - 12789602
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  12789746 tttttgtatggttcttaattaaattcaccatgatttcctcaaattcataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 12789647  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctcttttc 599  Q
    ||||| |||| ||||||||||||||||||||||||||||| ||||    
T  12789646 catacgaaaaacacctaaggaattgtacctaagttttctcctttc 12789602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 10441289 - 10441428
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||||||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10441289 ttttggtatgattcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 10441388  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    | ||| ||||||||||||||||||||||||||||||||||    
T  10441389 cgtaccaaaagcacctaaggaattgtacctaagttttctc 10441428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 619 - 730
Target Start/End: Original strand, 49074930 - 49075041
Alignment:
Q  619 aataatcgtgtatttttgtaaatgagacttatacaaaagggggaactaaagaatagaaagtcaaatgaaacttattgaaagcattgacctcgatgaaaag 718  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49074930 aataatcgtgtatttttgtaagtgagacttatacaagagggggaactaaagaatagaaagtcaaatgaaacttattgaaagcattgacctcgatgaaaag 49075029  T
Q  719 actttaaaattg 730  Q
    ||||||||||||    
T  49075030 actttaaaattg 49075041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 466 - 592
Target Start/End: Original strand, 45712945 - 45713071
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaag 565  Q
    |||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  45712945 ttcttaactaaattcaccatgatttcctcaaagccataattttatcaaagtttgttatatccaaaaaatatgtatttttagtttagaaccatacgaaaag 45713044  T
Q  566 cacctaaggaattgtacctaagttttc 592  Q
    |||||||||||||||||||||||||||    
T  45713045 cacctaaggaattgtacctaagttttc 45713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 25446390 - 25446252
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaa 553  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  25446390 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 25446291  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||||| ||||||||||||| ||||||||||||    
T  25446290 ccatacgaaaagca-ctaaggaattgta-ctaagttttctc 25446252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 36657464 - 36657603
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  36657464 ttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaac 36657563  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  36657564 catacgaaaagcatctaaggaattgtacctaagttttctc 36657603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 36822791 - 36822930
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36822791 ttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 36822890  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||  ||||||||||||||||||||    
T  36822891 catacgaaaagcacctaaaaaattgtacctaagttttctc 36822930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 55340321 - 55340464
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaa 550  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  55340321 tgtttttcgtatgattcttaactatattcaccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaa 55340420  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||  ||||  ||||||||||||||| ||||||||||||    
T  55340421 gaaccatatgaaaaatacctaaggaattgtatctaagttttctc 55340464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 466 - 588
Target Start/End: Original strand, 44611423 - 44611545
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaag 565  Q
    |||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||     
T  44611423 ttcttaactaaattcaccatgatttcttcaaattcataattttctcaaagtttgttatatcaaaaaaatatatatttttagttaaaaaccatacaaaaaa 44611522  T
Q  566 cacctaaggaattgtacctaagt 588  Q
    |||||||||||||||||||||||    
T  44611523 cacctaaggaattgtacctaagt 44611545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 476 - 598
Target Start/End: Complemental strand, 10017233 - 10017111
Alignment:
Q  476 aattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaagga 575  Q
    |||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||    
T  10017233 aattcatcatgattttctcaaatccataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatatgaaaagcacctaagga 10017134  T
Q  576 attgtacctaagttttctctttt 598  Q
    |||||||||||||||||||||||    
T  10017133 attgtacctaagttttctctttt 10017111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 459 - 594
Target Start/End: Complemental strand, 404181 - 404045
Alignment:
Q  459 cgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaaccat 557  Q
    |||||| ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| ||||||| ||||||||||||| || |||    
T  404181 cgtatggttcttaactaaattcaccatgatttcctcaagtctataattttctcaaagtttgttatatccaaaaaaatatttatttttagttaaaaatcat 404082  T
Q  558 acaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    || ||||||||||||| |||||||| |||||||||||    
T  404081 acgaaaagcacctaagaaattgtacgtaagttttctc 404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 455 - 598
Target Start/End: Complemental strand, 10117651 - 10117512
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaa 553  Q
    |||||||||| ||||||||||||||||     |||| ||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  10117651 ttttcgtatggttcttaactaaattca-----attttctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 10117557  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    |||||  |||||||||||||||| |||||||||||||||||||||    
T  10117556 ccatatgaaaagcacctaaggaactgtacctaagttttctctttt 10117512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 455 - 566
Target Start/End: Complemental strand, 22101305 - 22101193
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaa 553  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22101305 ttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatccaacaaaatatgtatttttagttaagaa 22101206  T
Q  554 ccatacaaaaagc 566  Q
    |||||| ||||||    
T  22101205 ccatacgaaaagc 22101193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 455 - 582
Target Start/End: Complemental strand, 50099574 - 50099445
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa--aaaatatatatttttagttaaga 552  Q
    |||||||||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||  ||||||| |||||||| |||| |    
T  50099574 ttttcgtatggttcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattaaaa 50099475  T
Q  553 accatacaaaaagcacctaaggaattgtac 582  Q
    ||||||| |||||||||||| |||||||||    
T  50099474 accatacgaaaagcacctaacgaattgtac 50099445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 1476582 - 1476718
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| |||| | ||||||||||||||||||||| |||||| ||||| |||||||||||||||| || ||||||  | |||||||||||||||||    
T  1476582 ttttggtatggttctaacctaaattcaccatgatttccttaaatccataattctctcaaagtttgttatctctaaaaaaattgtatttttagttaagaac 1476681  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||  |||||||||||||||||||||||||||||||    
T  1476682 catatgaaaagcacctaaggaattgtacctaagtttt 1476718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 5530032 - 5529892
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaa 553  Q
    |||||||||| || |||||||||   ||||||||||| | |||||  |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  5530032 ttttcgtatggttattaactaaaaataccatgatttctttaaatctataattttctcaaagtttgatatatccaaaaaaatatgtatttttagttaagaa 5529933  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  5529932 ccatacgaaaagcacctaagaaattgtacctaagttttctc 5529892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 489 - 594
Target Start/End: Original strand, 36329245 - 36329350
Alignment:
Q  489 ttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagt 588  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||| |||  |    
T  36329245 ttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaagaattgtagctacct 36329344  T
Q  589 tttctc 594  Q
    ||||||    
T  36329345 tttctc 36329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 566
Target Start/End: Complemental strand, 22176249 - 22176137
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaa 553  Q
    |||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  22176249 tttttgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgtaatatccaacaaaatatgtatttttagttaagaa 22176150  T
Q  554 ccatacaaaaagc 566  Q
    |||||| ||||||    
T  22176149 ccatacgaaaagc 22176137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 13724019 - 13724158
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaa 553  Q
    |||| ||||| |||||| ||||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||||| ||||||||||||| ||    
T  13724019 tttttgtatggttctta-ctaaattcaccatgatttcttcaaattcataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaaaaa 13724117  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
      |||| |||| || ||||||||||||||||||| ||||||    
T  13724118 ttatacgaaaaacatctaaggaattgtacctaagatttctc 13724158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 42105414 - 42105550
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| |||||||||||||||||| |||||| || |||||| ||||| |||||||||||||||| || ||||||  | |||||||||||||||||    
T  42105414 ttttcttatggttcttaactaaattcaccgtgattttcttaaatccataattctctcaaagtttgttatctctaaaaaaattgtatttttagttaagaac 42105513  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||| |||||| | |||||||| ||||||||    
T  42105514 catacaaaaaacacctacgaaattgtacttaagtttt 42105550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 495 - 594
Target Start/End: Original strand, 38125250 - 38125349
Alignment:
Q  495 aaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  38125250 aaatccataattttcttaaagtttgttatatacaaaaaatatgtatttttagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttctc 38125349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 44920677 - 44920815
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| |||||||||||||| || ||||||| |||||||   ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  44920677 ttttcttatggttcttaactaaatttacaatgattttctcaaatttataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaac 44920776  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
     ||| ||||| ||  |||| ||||||||||||||||||||    
T  44920777 tata-aaaaaacatataagaaattgtacctaagttttctc 44920815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 466 - 594
Target Start/End: Original strand, 157010 - 157139
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatat-ccaaaaaatatatatttttagttaagaaccatacaaaaa 564  Q
    |||||||||||||| | ||| |||||||||||||| ||||||||||||||||||||||||   ||||||||| ||||||||| ||||||| |||| ||||    
T  157010 ttcttaactaaatttatcataatttcctcaaatccataattttctcaaagtttgttatataaaaaaaaatatgtatttttagctaagaactataccaaaa 157109  T
Q  565 gcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||||||  |||||||||||    
T  157110 gcacctaagaaattgtatataagttttctc 157139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 26976873 - 26977009
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||  ||||||| |||||| |  ||||||| ||||||||| ||||||||||||||||| || ||||  ||||| |||||||||||||||| |||    
T  26976873 ttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagtttattgtatcgtaaaaagatatatttttagttaaaaac 26976972  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||| |||| ||||||| ||||||||||||||||||    
T  26976973 catacgaaaaacacctaaagaattgtacctaagtttt 26977009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 452 - 591
Target Start/End: Original strand, 37506155 - 37506293
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    |||||||  |||| |||||||||||||| || ||||||| || |||| | |||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  37506155 tgttttttctatggttcttaactaaatttac-atgattttcttaaattcataattttctcaaagtttgttatctccaaaaaaaatgtatttttagttaag 37506253  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||| || |||| ||||||| ||||||||| ||||||||    
T  37506254 aaccacacgaaaaacacctaaagaattgtacataagtttt 37506293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 533
Target Start/End: Complemental strand, 35368876 - 35368795
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa 533  Q
    ||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  35368876 tgtttttcgtatggtttttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaa 35368795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 487 - 594
Target Start/End: Complemental strand, 46664284 - 46664177
Alignment:
Q  487 atttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaa 586  Q
    |||||||||||| | ||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||| ||||  ||||||| ||||||||||||    
T  46664284 atttcctcaaattcataattttctcaaagtttgttatattaaaaaaatatgtatttttagttaagaactatacgaaaaatacctaagaaattgtacctaa 46664185  T
Q  587 gttttctc 594  Q
     |||||||    
T  46664184 attttctc 46664177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 455 - 564
Target Start/End: Complemental strand, 26977830 - 26977721
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| |||||||||||||| |  ||||||||||||||||| ||||||||||||||||| || ||||  ||||| || ||||||||||||| |||    
T  26977830 ttttcatatggttcttaactaaatttagtatgatttcctcaaatccataattttctcaaagtttattgtatcataaaaagatgtatttttagttaaaaac 26977731  T
Q  555 catacaaaaa 564  Q
    ||||| ||||    
T  26977730 catacgaaaa 26977721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 452 - 591
Target Start/End: Original strand, 46222056 - 46222196
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagtt--a 549  Q
    ||||||||||||| || |||||||||||||||||||||| || |||| | ||||||||||  |||||| |||| ||||||||  | | |||||||||  |    
T  46222056 tgtttttcgtatggtttttaactaaattcaccatgattttcttaaattcataattttctcttagtttg-tataaccaaaaaaggtgtgtttttagttaaa 46222154  T
Q  550 agaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    | ||| ||||||||| ||||||| ||||||||||||| ||||    
T  46222155 aaaacgatacaaaaaacacctaaagaattgtacctaactttt 46222196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 466 - 528
Target Start/End: Complemental strand, 46679390 - 46679328
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcca 528  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||    
T  46679390 ttcttaactaaattcaccataatttcctcaaatccataattttctcaaagtttgttaaatcca 46679328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 36657491 - 36657434
Alignment:
Q  537 atatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  36657491 atatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctc 36657434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 455 - 576
Target Start/End: Complemental strand, 37537010 - 37536889
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| ||||||||||||||    || |||||||| ||||| ||||||||||||||||||||||| | ||||||||| || |||||| |||||||    
T  37537010 tttttgtatggttcttaactaaattatttataatttcctctaatccataattttctcaaagtttgttataacaaaaaaatatgtaattttagataagaac 37536911  T
Q  555 catacaaaaagcacctaaggaa 576  Q
    ||||  ||||||| | ||||||    
T  37536910 catatgaaaagcatcaaaggaa 37536889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 598
Target Start/End: Original strand, 10254687 - 10254743
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  10254687 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctctttt 10254743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 21969210 - 21969158
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21969210 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 21969158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 21991646 - 21991594
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21991646 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 21991594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 22176227 - 22176279
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  22176227 tttagttaagaaccatacaaaaagcacataaggaattgtacctaagttttctc 22176279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 35368606 - 35368550
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  35368606 tatttttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctc 35368550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 36822817 - 36822761
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  36822817 tatttttagttaagaaccatacgaaaagcagctaaggaattgtacctaagttttctc 36822761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 45487917 - 45487969
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45487917 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 45487969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 50099552 - 50099604
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  50099552 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 50099604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 10441316 - 10441259
Alignment:
Q  537 atatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  10441316 atatttttagttaagaatcataccaaaagcacctaaggaattgtacttaagttttctc 10441259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 3970544 - 3970492
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  3970544 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctc 3970492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 4072326 - 4072274
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4072326 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 4072274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 598
Target Start/End: Original strand, 8831859 - 8831915
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  8831859 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttctctttt 8831915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 10117629 - 10117681
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  10117629 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 10117681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 13078216 - 13078164
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  13078216 tttagttaagaaccatacgaaaagcacctaaggaattgcacctaagttttctc 13078164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 548 - 596
Target Start/End: Complemental strand, 13724035 - 13723987
Alignment:
Q  548 taagaaccatacaaaaagcacctaaggaattgtacctaagttttctctt 596  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13724035 taagaaccatacaaaaagcacctaagaaattgtacctaagttttctctt 13723987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 466 - 550
Target Start/End: Original strand, 39677316 - 39677400
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaa 550  Q
    ||||||| ||||||||| ||||||| ||||||| | ||||||| ||||||||||||||   ||||||||||||||||||| ||||    
T  39677316 ttcttaattaaattcactatgattttctcaaattcataattttttcaaagtttgttatgcacaaaaaatatatatttttaattaa 39677400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 39850401 - 39850345
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||    
T  39850401 tatttttagttaagaaccatacgaaaaacacctaaggaatagtacctaagttttctc 39850345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 547 - 598
Target Start/End: Original strand, 10017232 - 10017283
Alignment:
Q  547 ttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  10017232 ttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctctttt 10017283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 593
Target Start/End: Complemental strand, 32237447 - 32237396
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  32237447 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 32237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 455 - 525
Target Start/End: Complemental strand, 49984071 - 49984001
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatat 525  Q
    |||||||| ||||||||||||||||||||||||||| || |||||| ||||||| ||||| ||| ||||||    
T  49984071 ttttcgtacgattcttaactaaattcaccatgattttcttaaatccataattttttcaaaatttattatat 49984001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 297568 - 297702
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||| ||||||| || |  |||| || |||||| ||||||||||| |||||||||||| ||||||   ||| ||||||||||||||     
T  297568 ttttcgtatggttcttagctaaatttactacaattttctgaaatccataattttctcatagtttgttatattcaaaaa--ttatgtttttagttaagaat 297665  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||  ||||||| ||||  |||| |||||| |||||    
T  297666 catatgaaaagcatctaaaaaattttacctaggtttt 297702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 12789724 - 12789776
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||||||||    
T  12789724 tttaattaagaaccatacaaaaagcacctaaggaattctaccaaagttttctc 12789776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 22101283 - 22101335
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||||||||    
T  22101283 tttagttaagaaccatacgaaaagctcataaggaattgtacctaagttttctc 22101335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 25446368 - 25446419
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  25446368 tttagttaagaaccatacgaaaagcacctaaggaattgta-ctaagttttctc 25446419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 26906572 - 26906624
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  26906572 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctc 26906624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 36278809 - 36278757
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  36278809 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctc 36278757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 528 - 594
Target Start/End: Complemental strand, 32362928 - 32362862
Alignment:
Q  528 aaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| |||| |||||||||||||||||||||| |||| ||||||| ||||||||  |||||||||||    
T  32362928 aaaatatatgtatttttagttaagaaccatacgaaaaacacctaaagaattgtagttaagttttctc 32362862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 297590 - 297541
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  297590 tttagctaagaaccatacgaaaagcaccaaaggaattgtacctaagtttt 297541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 550 - 591
Target Start/End: Complemental strand, 1476596 - 1476555
Alignment:
Q  550 agaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  1476596 agaaccataccaaaagcacctaaggaattgtacctaagtttt 1476555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 25488394 - 25488342
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||| ||||||    
T  25488394 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctc 25488342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 25561129 - 25561181
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||| ||||||    
T  25561129 tttagttaagaactatacgaaaagcacctaaggaattgtacttaagatttctc 25561181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 26976895 - 26976843
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| |||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  26976895 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctc 26976843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 44611434 - 44611383
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  44611434 tttagttaagaactatacaaaaagtacctaaggaattgta-ctaagttttctc 44611383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 45712956 - 45712904
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||  | | |||||||||||||||||||||||||||||||||||    
T  45712956 tttagttaagaaaaaaaaaaaaagcacctaaggaattgtacctaagttttctc 45712904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 564
Target Start/End: Complemental strand, 24435682 - 24435620
Alignment:
Q  502 taattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaa 564  Q
    ||||||||||||||||| | | |   |||||||||||||||| ||||||||||||||||||||    
T  24435682 taattttctcaaagtttatcacaaataaaaaatatatattttaagttaagaaccatacaaaaa 24435620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 591
Target Start/End: Original strand, 5530006 - 5530059
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||| |||||||| |||||||| |||| |||||||||||| ||||    
T  5530006 tatttttagttaataaccatacgaaaagcacttaagaaattgtacctaaatttt 5530059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 26977808 - 26977860
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  ||||| | ||||| ||||||||||||||||||||    
T  26977808 tttagttaagaaccatatgaaaagtatctaagaaattgtacctaagttttctc 26977860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 469 - 533
Target Start/End: Complemental strand, 32363180 - 32363116
Alignment:
Q  469 ttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa 533  Q
    ||||||||||| || || |||| ||||||||| ||||||| | ||| ||||||||||||||||||    
T  32363180 ttaactaaatttacaataattttctcaaatccataattttttaaaaatttgttatatccaaaaaa 32363116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 35368851 - 35368903
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||||||| |||| ||| |||| ||||||||||||||||||||    
T  35368851 tttagttaaaaaccatacgaaaaacacataagaaattgtacctaagttttctc 35368903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 36329241 - 36329189
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| |||||||| |||||||||| | ||||| ||||||||||||||||||||    
T  36329241 tttatttaagaacaatacaaaaagtatctaagaaattgtacctaagttttctc 36329189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 594
Target Start/End: Complemental strand, 43639130 - 43639082
Alignment:
Q  546 gttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| ||||| |||||||||||||||||| || ||||||||||||    
T  43639130 gttaagaatcatacgaaaagcacctaaggaattataactaagttttctc 43639082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 46679379 - 46679431
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||| || |||||||| | |||||||||||| |||||||||||    
T  46679379 tttagttaagaaccgtataaaaagcatccaaggaattgtacttaagttttctc 46679431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 466 - 568
Target Start/End: Complemental strand, 19953975 - 19953873
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaag 565  Q
    |||||||||||| |  | ||||||||||||||| | ||||||  | ||||||||||||| | ||||||| |  ||||||| ||| ||||||||  |||||    
T  19953975 ttcttaactaaaatatctatgatttcctcaaattcataatttgtttaaagtttgttataacaaaaaaatgtgcatttttaattatgaaccatatgaaaag 19953876  T
Q  566 cac 568  Q
    |||    
T  19953875 cac 19953873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 532
Target Start/End: Complemental strand, 4567321 - 4567244
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaa 532  Q
    |||||||||| |||||| ||||||| | || | ||||||||||| | |  ||||||||| |||||||||||| |||||    
T  4567321 ttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatctaaaaa 4567244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 42105436 - 42105387
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||  ||||| ||||| | |||||||||||||||||    
T  42105436 tttagttaagaaccataagaaaagtacctatgaaattgtacctaagtttt 42105387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 120; Significance: 5e-61; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 45974 - 45835
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45974 ttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 45875  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45874 catacaaaaagcacctaaggaattgtacctaagttttctc 45835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 45952 - 46004
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  45952 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctc 46004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 5e-61; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 885525 - 885386
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  885525 ttttcctatgattcttaactaaattcatcatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 885426  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  885425 catacaaaaagcacctaaggaattgtacctaagttttctc 885386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 21379972 - 21380111
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  21379972 ttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttatatccaaaaaatatgtatttttagttaagaac 21380071  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  21380072 catacgaaaagcacctaaggaattgtacctaagttttctc 21380111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 598
Target Start/End: Complemental strand, 8091202 - 8091059
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8091202 ttttcgtatggttcttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 8091103  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||    
T  8091102 catacgaaaagcacctaaggaattgtatctaaattttctctttt 8091059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 15546772 - 15546633
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15546772 ttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 15546673  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  15546672 catacaaaaaacaactaaggaattgtacctaagttttctc 15546633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 13439839 - 13439696
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaa 550  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  13439839 tgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagctaa 13439740  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| ||||| || |||||||||||||||||||||||||    
T  13439739 gaaccatacgaaaagtacttaaggaattgtacctaagttttctc 13439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 3369125 - 3368986
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||  ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  3369125 ttttcgtatcgttcctaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaac 3369026  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||  ||||||||||    
T  3369025 catacgaaaagcacctaaggaattgtactcaagttttctc 3368986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 4890508 - 4890651
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaa 550  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||| |||||||||   |||||||||||    
T  4890508 tgtttttcgtatggttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaatatgcgtttttagttaa 4890607  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  4890608 gaaccatacgaaaagcacctaaggaattgtacctaaattttctc 4890651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 11687174 - 11687313
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  11687174 ttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaac 11687273  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  11687274 catacgaaaagcatctaaggaattgtacctaagttttctc 11687313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 455 - 597
Target Start/End: Complemental strand, 7808749 - 7808607
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  7808749 ttttcgtatggttcttaactaaaaataccatgatttcctcaaatctataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaac 7808650  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctcttt 597  Q
    || || |||| ||||||||||||||||||||||||||||||||    
T  7808649 caaacgaaaaacacctaaggaattgtacctaagttttctcttt 7808607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 20501846 - 20501707
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  20501846 ttttcgtatggttcttaactaaaaataccatgatttcttcaaatccataattttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaac 20501747  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||| |||||||||||||||| ||||||||||||    
T  20501746 catacgaaaaacacctaaggaattgtaactaagttttctc 20501707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 455 - 582
Target Start/End: Complemental strand, 14393704 - 14393574
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaa---aaatatatatttttagttaag 551  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   |||||| ||||||||||||||    
T  14393704 tttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaagaaatatgtatttttagttaag 14393605  T
Q  552 aaccatacaaaaagcacctaaggaattgtac 582  Q
    || ||||| ||||||||||||||||||||||    
T  14393604 aatcatacgaaaagcacctaaggaattgtac 14393574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 452 - 593
Target Start/End: Original strand, 18998145 - 18998286
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatc-caaaaaatatatatttttagttaa 550  Q
    ||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||  ||||||||| |||||||| ||||    
T  18998145 tgtttttcgtacg-ttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatcaaaaaaaatatgtatttttaattaa 18998243  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||    
T  18998244 gaaccatacgaaaagcacctaaggaattgtagctaaattttct 18998286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 455 - 591
Target Start/End: Complemental strand, 29609141 - 29609005
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| ||||||||| || |||||||||||||||||    
T  29609141 ttttcgtatggtttttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttatctccaaaaaagatgtatttttagttaagaac 29609042  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    || || |||||||| ||| ||||||||||||||||||    
T  29609041 cacacgaaaagcacttaaagaattgtacctaagtttt 29609005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 451 - 592
Target Start/End: Original strand, 13172601 - 13172742
Alignment:
Q  451 atgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaa 550  Q
    |||||||||||||| ||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  13172601 atgtttttcgtatggttcttaactaaattcat-atcatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttacttaa 13172699  T
Q  551 gaaccatacaaaaagcacctaaggaa-ttgtacctaagttttc 592  Q
    ||||||||| |||| ||| ||||||| |||||| |||||||||    
T  13172700 gaaccatacgaaaaacacttaaggaatttgtacttaagttttc 13172742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 452 - 591
Target Start/End: Original strand, 31764353 - 31764492
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||| ||||| |||||||||||||||||||| |||| ||||||| | |||||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  31764353 tgttttttgtatggttcttaactaaattcaccattattttctcaaattcataattttctcaaagtttgttgtatccaaaaaatatgtatctttagttaag 31764452  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||| |||| ||||| | ||||| |||||||||||||||||    
T  31764453 aactatacgaaaagtatctaagaaattgtacctaagtttt 31764492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 4238994 - 4238853
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa--aaaatatatatttttagttaaga 552  Q
    |||| ||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||| |||||||| || |||    
T  4238994 tttttgtatggttcttaattaaattcaccatgattttctcaaatccttaattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattgaga 4238895  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||| ||| |||||||| |||| |||||||    
T  4238894 accatacaaaaagcacataaagaattgtatctaaattttctc 4238853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 457 - 593
Target Start/End: Complemental strand, 17279665 - 17279526
Alignment:
Q  457 ttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgtt---atatccaaaaaatatatatttttagttaagaa 553  Q
    |||||||  |||||||||||||||| ||||||||| |||||| | ||||||| ||||||||||||   |||| |||||||||| |||||||| |||||||    
T  17279665 ttcgtatagttcttaactaaattcatcatgatttcttcaaattcataattttatcaaagtttgttgttatattcaaaaaatatgtatttttaattaagaa 17279566  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||| ||||  ||||||| |||||||  ||||||||||    
T  17279565 ccatacgaaaaatacctaagaaattgtagataagttttct 17279526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 538 - 596
Target Start/End: Original strand, 7808723 - 7808781
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctt 596  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7808723 tatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctctt 7808781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 11687201 - 11687144
Alignment:
Q  537 atatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  11687201 atatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctc 11687144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 14393682 - 14393734
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14393682 tttagttaagaaccatacaaaaagcacctaaggaattatacctaagttttctc 14393734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 21379994 - 21379942
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21379994 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 21379942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 8091180 - 8091232
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  8091180 tttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctc 8091232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 15546750 - 15546802
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15546750 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 15546802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 885503 - 885555
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  885503 tttagttaagaatcataggaaaagcacctaaggaattgtacctaagttttctc 885555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 4890533 - 4890481
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  4890533 tttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttctc 4890481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 6433743 - 6433691
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  6433743 tttagttaagaaccatacgaaaagcacctaagaaattatacctaagttttctc 6433691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 455 - 500
Target Start/End: Complemental strand, 6433797 - 6433752
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatcc 500  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||    
T  6433797 ttttcgtatggttcttaactaaattcactatgatttcctcaaatcc 6433752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 538 - 591
Target Start/End: Original strand, 20501820 - 20501872
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  20501820 tatttttagttaagaaccatacgaaaagcacctaagaaattgta-ctaagtttt 20501872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 590
Target Start/End: Original strand, 4238972 - 4239020
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttt 590  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  4238972 tttaattaagaaccatacaaaaagcacagaaggaattgtacctaagttt 4239020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 502 - 591
Target Start/End: Original strand, 34522338 - 34522426
Alignment:
Q  502 taattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||| |||||||||||||||| ||||||| | || ||||||||||||||   | ||||||| ||||| |||||| |||||||||||    
T  34522338 taattttcttaaagtttgttatatccaaaaaaatctttaattttagttaagaac--aaaaaaaagcgcctaaagaattgcacctaagtttt 34522426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 594
Target Start/End: Complemental strand, 17367115 - 17367065
Alignment:
Q  544 tagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||| ||||| ||||| || |||||||||||||||||||||||||    
T  17367115 tagttaagaatcatacgaaaagaacataaggaattgtacctaagttttctc 17367065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 597
Target Start/End: Complemental strand, 4076723 - 4076631
Alignment:
Q  504 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctcttt 597  Q
    ||||||||| ||||||||||  | ||||||||| || ||||| ||||||||||||| |||| ||  ||| |||||||| ||||||||| |||||    
T  4076723 attttctcatagtttgttatgccaaaaaaatatgtagttttaattaagaaccatacgaaaaacatttaaagaattgta-ctaagttttatcttt 4076631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 29609119 - 29609168
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||| |||||||| ||||||| |||||||||||||| ||||||||    
T  29609119 tttagttaaaaaccatacgaaaagcatctaaggaattgtacgtaagtttt 29609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 13172627 - 13172575
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||| || |||  |||||||||||||||||||||    
T  13172627 tttagttaagaaccatacgaaaaacatctagagaattgtacctaagttttctc 13172575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 13439814 - 13439866
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||| |||||  | ||||||||||||||||||||    
T  13439814 tttagttaagaaccatacgaaaaacacctgcgtaattgtacctaagttttctc 13439866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 18998169 - 18998118
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||  ||| |||| |||||||||||||||||||||||||||||    
T  18998169 tttagttaagaacg-tacgaaaaacacctaaggaattgtacctaagttttctc 18998118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 562
Target Start/End: Complemental strand, 7441809 - 7441753
Alignment:
Q  504 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaa 562  Q
    ||||||||||||||| ||||| |  |||||| |||||||| ||||||||||||||||||    
T  7441809 attttctcaaagtttattataac--aaaaatctatattttgagttaagaaccatacaaa 7441753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 502 - 591
Target Start/End: Original strand, 1681140 - 1681230
Alignment:
Q  502 taattttctcaaagtttgtta-tatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||| ||||  ||||| || | |||| ||||||||| ||||| |||| ||||||  ||| || |||||||||||    
T  1681140 taattttctcaaagtttgttattatcacaaaaaaatgtcttttaagttaagaatcatacgaaaaacacctacagaaatgcacctaagtttt 1681230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 525
Target Start/End: Original strand, 2599087 - 2599156
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatat 525  Q
    |||| |||| ||||||||||||||| ||||||||||  |||||| | ||||||| |||||| |||||||||    
T  2599087 tttttgtatcattcttaactaaattaaccatgatttgttcaaattcataatttt-tcaaagcttgttatat 2599156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 591
Target Start/End: Original strand, 4179128 - 4179192
Alignment:
Q  526 ccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||| || ||||||||||||||||||| |||| ||  ||| |||||||| |||||||||    
T  4179128 ccaaaaaatatgtagttttagttaagaaccatacgaaaaacatttaaagaattgta-ctaagtttt 4179192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 594
Target Start/End: Original strand, 5416655 - 5416684
Alignment:
Q  565 gcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||    
T  5416655 gcacctaaggaattgtacctaagttttctc 5416684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 469 - 565
Target Start/End: Complemental strand, 7187688 - 7187594
Alignment:
Q  469 ttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaag 565  Q
    ||||||||||  |||||||||| ||||||| | || |||||||||||||| ||||| |  ||||| |  ||||||||||| |||| ||||| |||||    
T  7187688 ttaactaaataaaccatgatttactcaaattcatatttttctcaaagtttattataac--aaaaaaaagtatttttagtttagaatcatacgaaaag 7187594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 17367117 - 17367158
Alignment:
Q  484 atgatttcctcaaatccgtaattttctcaaagtttgttatat 525  Q
    |||||||| |||||| | ||||||||||||||||||||||||    
T  17367117 atgatttcatcaaattcataattttctcaaagtttgttatat 17367158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 5e-61; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 1299052 - 1298913
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1299052 ttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 1298953  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1298952 catacaaaaagcacctaaggaattgtacctaagttttctc 1298913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 18417797 - 18417658
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18417797 tttttgtatggttcttaattaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 18417698  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  18417697 catacgaaaagcacctaaggaattgtacctaagttttctc 18417658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 455 - 595
Target Start/End: Original strand, 42274523 - 42274664
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaa 553  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42274523 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaa 42274622  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctct 595  Q
    |||||| |||| ||||||||||||||||||||||||||||||    
T  42274623 ccatacgaaaaacacctaaggaattgtacctaagttttctct 42274664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 530700 - 530839
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  530700 tttttgtatggttcttaactaaattcaccatcatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 530799  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  530800 catacgaaaagcacctaaggaattgtacctaagttttctc 530839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 23928595 - 23928737
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  23928595 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaaatttgttatatccaaaaaaaatatatttttagttaag 23928694  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    || |||||  ||||||||||||||||||||| |||||||||||    
T  23928695 aatcatacgcaaagcacctaaggaattgtacataagttttctc 23928737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 20435171 - 20435310
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  20435171 ttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaac 20435270  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  20435271 catacgaaaagcacctaaagaattgtacctaagttttctc 20435310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 13204517 - 13204378
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  13204517 ttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttatatccaaaaaatatgtatttttagttaagaac 13204418  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||| ||||||| ||||||| ||||||||||||    
T  13204417 catacaaaaagtacctaagtaattgtatctaagttttctc 13204378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 460 - 594
Target Start/End: Complemental strand, 4552920 - 4552786
Alignment:
Q  460 gtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatac 559  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||     
T  4552920 gtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatttatttttagttaaaaaccatat 4552821  T
Q  560 aaaaagcacctaaggaattgtacctaagttttctc 594  Q
     |||||||| |||||||||||||||||||||||||    
T  4552820 gaaaagcacttaaggaattgtacctaagttttctc 4552786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 24969572 - 24969714
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc---aaaaaatatatatttttagttaag 551  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||   |||||| || ||||||||||||||    
T  24969572 ttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaaaaatgtatttttagttaag 24969671  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||| |||| ||||||||||||||||||||||||||||||||||    
T  24969672 aactatacgaaaagcacctaaggaattgtacctaagttttctc 24969714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 27434750 - 27434611
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  27434750 ttttcgtatggttcttaactaaatttaccataatttcctcaaattcataattttctcaaagtttgttatatccaaaaaaaatgtatttttagttaagaac 27434651  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
     ||||||||||||| |||| ||||||||||||||||||||    
T  27434650 tatacaaaaagcacataagaaattgtacctaagttttctc 27434611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 32318751 - 32318890
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  32318751 ttttcgtatggttcttaactaaattcaccatgatttcctcagatccataattttctcaaagtttgttatatccaaaaaatatatatttttaattaagaat 32318850  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||  |||||||||||| ||||||||| ||| |||||||    
T  32318851 catatgaaaagcacctaaagaattgtacttaaattttctc 32318890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 55107664 - 55107525
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| ||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  55107664 tttttgtatggttctttactaaatttaccatgatttcctcaaatgcataattttctcaaagtttgttatatccaaataatatgtatttttagttaagaac 55107565  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||  |||||||| |||||||||||||||||||||||||    
T  55107564 catatgaaaagcacataaggaattgtacctaagttttctc 55107525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 35360819 - 35360678
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  35360819 tgtttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatctaaaaaatatgtatttttagttaag 35360720  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| ||||  ||||||  ||||||| ||||||||||||    
T  35360719 aaccatacgaaaaatacctaataaattgta-ctaagttttctc 35360678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 455 - 596
Target Start/End: Original strand, 4688278 - 4688420
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaa 553  Q
    |||||||||| |||||||||||||||||  |||||||||||||| |  ||||||||||||||||||||||||| ||||||||| |||||||| |||||||    
T  4688278 ttttcgtatggttcttaactaaattcactgtgatttcctcaaattcacaattttctcaaagtttgttatatccaaaaaaatatgtatttttaattaagaa 4688377  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctctt 596  Q
    |||||| |||| || ||||||||||||||||||||||||||||    
T  4688378 ccatacgaaaatcatctaaggaattgtacctaagttttctctt 4688420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 24915825 - 24915968
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaa-----aatatatatttttagtta 549  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||     ||||| ||||||||||||    
T  24915825 ttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaaaataatatgtatttttagtta 24915924  T
Q  550 agaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| ||||||| || |||| ||||||||||||||||||||    
T  24915925 agaaccat-caaaaagtacataagaaattgtacctaagttttctc 24915968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 487 - 594
Target Start/End: Complemental strand, 52824347 - 52824240
Alignment:
Q  487 atttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaa 586  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52824347 atttcctcaaatccataattttctcaaagtttattatatctaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaa 52824248  T
Q  587 gttttctc 594  Q
    ||||||||    
T  52824247 gttttctc 52824240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 469 - 594
Target Start/End: Original strand, 28809891 - 28810017
Alignment:
Q  469 ttaactaaatt-caccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagca 567  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  28809891 ttaactaaatttcaccatgattttctcaaatccataattttctcaaaatttgttatatccaaaaaatatgtatttctagttaagaaccataccaaaagca 28809990  T
Q  568 cctaaggaattgtacctaagttttctc 594  Q
     ||||| ||||||||||||||||||||    
T  28809991 gctaagaaattgtacctaagttttctc 28810017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 466 - 594
Target Start/End: Complemental strand, 4895101 - 4894970
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaa-- 563  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||      
T  4895101 ttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaactatacaaaaaa 4895002  T
Q  564 -agcacctaaggaattgtacctaagttttctc 594  Q
     || || |||||||||||||||||||||||||    
T  4895001 cagtacataaggaattgtacctaagttttctc 4894970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 24294610 - 24294493
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  24294610 tgtttttcgtatggttcttaactaaattcaccataatttcctcaaattcgtaattttctcaaagtttgttatatcaaaaaaatatgtatttttaattaag 24294511  T
Q  552 aaccatacaaaaagcacc 569  Q
    || ||||| |||||||||    
T  24294510 aatcatacgaaaagcacc 24294493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 455 - 565
Target Start/End: Original strand, 21048736 - 21048845
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| |||||||||||||||||    
T  21048736 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcgaagtttgttatat-caaaaaatatgtatttttagttaagaac 21048834  T
Q  555 catacaaaaag 565  Q
    ||||| |||||    
T  21048835 catacgaaaag 21048845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 458 - 592
Target Start/End: Complemental strand, 56552198 - 56552064
Alignment:
Q  458 tcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccat 557  Q
    ||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||  ||  | ||||||||||| ||||||||    
T  56552198 tcgtatggttcttaaataaattaaccatgatttcctcaaatccataattttctcaaagtttgttataaccaaggaaagtgtatttttagttgagaaccat 56552099  T
Q  558 acaaaaagcacctaaggaattgtacctaagttttc 592  Q
    ||||||||||||||||||| ||||||| |||||||    
T  56552098 acaaaaagcacctaaggaaatgtacctgagttttc 56552064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 591
Target Start/End: Complemental strand, 2272506 - 2272371
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||| |||||||||||  | || ||||||||||||||    
T  2272506 ttttcgtatggttcttagctaaattcaccatgatttccttaaatccataattttatcaaagtttgttctatccaaaaaaattgta-ttttagttaagaac 2272408  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||| |||||||||||||  ||||||| |||||||||    
T  2272407 catataaaaagcacctaaaaaattgtaactaagtttt 2272371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 3422460 - 3422596
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||  ||||||| |||||| |  ||||||| ||||||||| ||||||||||||||||| || ||||  ||||| |||||||||||||||| |||    
T  3422460 ttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagtttattgtatcgtaaaaagatatatttttagttaaaaac 3422559  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||| |||| ||||||| ||||||||||||||||||    
T  3422560 catacgaaaaacacctaaagaattgtacctaagtttt 3422596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 591
Target Start/End: Original strand, 16995582 - 16995721
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| || |||| |||||||| |||||||| |||||| || | ||||| ||| ||||||||||||| |||||| || |||| ||||||||     
T  16995582 tgtttttcgtatggtttttaattaaattcaacatgattttctcaaacccatcattttttcagagtttgttatatctaaaaaagatgtattgttagttaaa 16995681  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||| |||| ||| ||| |||||||| |||||||||    
T  16995682 aaccatacgaaaatcacttaaagaattgtatctaagtttt 16995721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 491 - 594
Target Start/End: Original strand, 52587382 - 52587480
Alignment:
Q  491 cctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttt 590  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||| ||||||||||||| ||   |||||||||||    
T  52587382 cctcaaatccataattttctcaaagtttgttatatcaaaaaattatata--tttagttaagaaccatacgaaaagcacctaagtaa---tacctaagttt 52587476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 47465016 - 47465151
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||||||| ||| ||||||||||||| | ||||||| | |||| | ||||||| | |||||||||||| || ||| || |||||||||||||||| ||     
T  47465016 ttttcgtataatttttaactaaattcatcgtgatttctt-aaattcataatttttttaaagtttgttatctctaaacaagatatatttttagttaaaaat 47465114  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||  |||||||||||| ||||||||||||||||||    
T  47465115 catatgaaaagcacctaaagaattgtacctaagtttt 47465151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 455 - 532
Target Start/End: Original strand, 55049431 - 55049508
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaa 532  Q
    |||||||||  ||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||    
T  55049431 ttttcgtatagttcttaactaaattcactatgatttcctcaaacccataattttttcaaagtttgttatatccaaaaa 55049508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 530722 - 530670
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  530722 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 530670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 598
Target Start/End: Complemental strand, 4688300 - 4688244
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  4688300 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctctttt 4688244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 18417775 - 18417827
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18417775 tttaattaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 18417827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 24915847 - 24915795
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24915847 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 24915795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 55107642 - 55107694
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  55107642 tttagtaaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 55107694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 455 - 533
Target Start/End: Original strand, 9355584 - 9355662
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa 533  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||| || ||||||    
T  9355584 ttttcatatggttcttaactaaattcaccatgatttccttaaatccataattttctcagaatttgttatctcaaaaaaa 9355662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 542 - 595
Target Start/End: Complemental strand, 32318773 - 32318720
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctct 595  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  32318773 tttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttctct 32318720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 1299030 - 1299082
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  1299030 tttagttaagaaccataagaaaagcacctaaggaattgtacctaagttttctc 1299082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 27434728 - 27434780
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  27434728 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttctc 27434780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 42274545 - 42274493
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  42274545 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctc 42274493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 593
Target Start/End: Complemental strand, 24969594 - 24969543
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  24969594 tttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttct 24969543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 593
Target Start/End: Original strand, 37525059 - 37525112
Alignment:
Q  540 tttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    ||||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  37525059 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 37525112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 4552903 - 4552955
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  4552903 tttagttaagaaccatacagaaagcatataaggaattgtacctaagttttctc 4552955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 21048758 - 21048706
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  21048758 tttagttaagaaccatacgaaaagcatctaacgaattgtacctaagttttctc 21048706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 43486253 - 43486201
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  43486253 tttagttaagaaccataggaaaagtacctaaggaattgtacctaagttttctc 43486201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 55049453 - 55049401
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  55049453 tttagttaagaactatacgaaaagcacctaaggaattgtacataagttttctc 55049401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 591
Target Start/End: Original strand, 19600985 - 19601107
Alignment:
Q  469 ttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcac 568  Q
    |||| ||||||| |||||||||  | |||||| |||| || |||||||||||||| |  ||||||| | |||||||| ||||||| ||||||||| ||||    
T  19600985 ttaattaaattcgccatgattttgttaaatccataatattttcaaagtttgttatttaaaaaaaatgtgtatttttaattaagaatcatacaaaatgcac 19601084  T
Q  569 ctaaggaattgtacctaagtttt 591  Q
     |||   ||| ||||||||||||    
T  19601085 ttaaaatattatacctaagtttt 19601107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 450 - 550
Target Start/End: Original strand, 1051198 - 1051296
Alignment:
Q  450 catgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagtta 549  Q
    |||| ||||||||| |||||||| |||||| |  |||||||| ||||||   ||||||||| ||||||||| |||||||||| ||||  |||||||||||    
T  1051198 catgattttcgtataattcttaattaaatttattatgatttcttcaaatttataattttcttaaagtttgtaatatccaaaagatat--atttttagtta 1051295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 538 - 591
Target Start/End: Original strand, 42020204 - 42020257
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||||||||||||| | |||  ||||||||||||||||||    
T  42020204 tatttttagttaagaaccatacaaaaagtatctagagaattgtacctaagtttt 42020257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 3422482 - 3422430
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| |||||||| |||| ||||||||||||| ||||||||||||||||||||    
T  3422482 tttaattaagaactatacgaaaagcacctaagaaattgtacctaagttttctc 3422430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 13204495 - 13204547
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||||||| ||||| || |||||||||||||||||||||||||    
T  13204495 tttagttaaaaaccatacgaaaagtacataaggaattgtacctaagttttctc 13204547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 20435193 - 20435141
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||| |||||||||||||  |||||||||||    
T  20435193 tttagttaagaaccatacgaaaagcatctaaggaattgtatataagttttctc 20435141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 28574004 - 28573948
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| || |||||||||| | ||||||||||||| ||||||||||||||||||||    
T  28574004 tattttaaggtaagaaccatgcgaaaagcacctaagtaattgtacctaagttttctc 28573948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 28809899 - 28809847
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| ||| |||| ||||||||||||| ||||||||||||||||||||    
T  28809899 tttagttaaaaacaataccaaaagcacctaagaaattgtacctaagttttctc 28809847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 542 - 593
Target Start/End: Complemental strand, 36030992 - 36030941
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||| ||||||    
T  36030992 tttagttaagaaacatacgaaaagcacgtaaggaattgtacctaacttttct 36030941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 9355606 - 9355557
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||  ||||||||||||||||||||||  |||||||    
T  9355606 tttagttaagaaccatatgaaaagcacctaaggaattgtacggaagtttt 9355557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 23928620 - 23928569
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||| |||| ||| |||||||||||||||||||||||||    
T  23928620 tttagttaagaatcatacgaaaaacac-taaggaattgtacctaagttttctc 23928569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 502 - 557
Target Start/End: Original strand, 23481999 - 23482054
Alignment:
Q  502 taattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccat 557  Q
    ||||||||||||| ||||||||||  |||||| || ||| ||||||||||||||||    
T  23481999 taattttctcaaaatttgttatatataaaaaagatgtatatttagttaagaaccat 23482054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 491 - 525
Target Start/End: Original strand, 36030997 - 36031031
Alignment:
Q  491 cctcaaatccgtaattttctcaaagtttgttatat 525  Q
    |||||||||| ||||||||||||||||||||||||    
T  36030997 cctcaaatccataattttctcaaagtttgttatat 36031031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 455 - 497
Target Start/End: Original strand, 43486231 - 43486273
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaa 497  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||    
T  43486231 ttttcctatggttcttaactaaattcaccatgattttctcaaa 43486273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 590
Target Start/End: Original strand, 24294585 - 24294636
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacc---taaggaattgtacctaagttt 590  Q
    |||||||||||||||||| |||| ||||   |||||||||||||||||||||    
T  24294585 tttagttaagaaccatacgaaaaacaccacctaaggaattgtacctaagttt 24294636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 591
Target Start/End: Complemental strand, 36860738 - 36860661
Alignment:
Q  514 agtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||| ||||| ||||||||||  |||| || |||| | ||||||| |||  |||||||||||| ||||    
T  36860738 agtttgttatatcctaaaaagatatatttttcattaataatcatatacaaagcacttaaaaaattgtacctaaatttt 36860661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 5e-61; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 5189609 - 5189470
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5189609 ttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 5189510  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  5189509 catacgaaaagcacctaaggaattgtacctaagttttctc 5189470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 19954942 - 19955081
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19954942 ttttcgtatagttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 19955041  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  19955042 catacaaaaagtacctaaggaattgtacctaagttttctc 19955081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 42561326 - 42561465
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42561326 ttttcgtatggttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 42561425  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42561426 catacaaaaagcacctaaggaattgtacctaagttttctc 42561465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 9978082 - 9978222
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaa 553  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  9978082 ttttcgtatgattcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 9978181  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  9978182 ccatacgaaaagcacctaaggaattgtacctaagttttctc 9978222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 2854563 - 2854702
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2854563 ttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 2854662  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  2854663 catacgaaaaggacctaaggaattgtacctaagttttctc 2854702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 23698533 - 23698672
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23698533 ttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 23698632  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  23698633 catacgaaaaggacctaaggaattgtacctaagttttctc 23698672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 27240955 - 27241094
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27240955 ttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 27241054  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||  ||||||||||| |||||||||||||||||||||    
T  27241055 catacgcaaagcacctaacgaattgtacctaagttttctc 27241094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 456 - 594
Target Start/End: Original strand, 14387047 - 14387185
Alignment:
Q  456 tttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 555  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  14387047 tttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaacc 14387146  T
Q  556 atacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  14387147 atacgaaaaacacctaaggaattgtacctaagttttctc 14387185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 3607760 - 3607899
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3607760 tttttgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 3607859  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  3607860 catacgaaaagcacctaagaaattgtacctaagttttctc 3607899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 48954245 - 48954384
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48954245 ttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 48954344  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  48954345 catacgaaaaggacctaaggaattgtacctaagttttctc 48954384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 15324767 - 15324627
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaa 553  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  15324767 ttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 15324668  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  15324667 ccatacgaaaagcacctaagaaattgtacctaagttttctc 15324627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 47940601 - 47940741
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaa 553  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  47940601 ttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 47940700  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  47940701 ccatacgaaaaacacctaaggaattgtacctaagttttctc 47940741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 6079524 - 6079385
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  6079524 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagtgaagaac 6079425  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    | ||| |||| || |||||||||||||||| |||||||||    
T  6079424 cgtacgaaaaacatctaaggaattgtacctgagttttctc 6079385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 19797012 - 19797151
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || |||||||||   |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  19797012 ttttcgtatggtttttaactaaaaataccatgatttcctcaaatccataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 19797111  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  19797112 catacgaaaagcacctaaggaattgtacctaagttttctc 19797151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 50627271 - 50627132
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50627271 ttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 50627172  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  50627171 catacgaaaagcatctaaggaattgtacctaagttttctc 50627132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 4299423 - 4299565
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc---aaaaaatatatatttttagttaag 551  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||   ||||||||| ||||||||||||||    
T  4299423 ttttcgtatggctcttaactaaattcaccattatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaaatatgtatttttagttaag 4299522  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  4299523 aaccatacgaaaaacacctaaggaattgtacctaagttttctc 4299565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 455 - 598
Target Start/End: Original strand, 51276726 - 51276869
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||||| ||||||  |||||| || ||||||||| |||||||    
T  51276726 ttttcgtatggttcttaactaaattcattatgatttcctcaaatccataattttctcaaagtttattatataaaaaaaaaatgtatttttagctaagaac 51276825  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  51276826 catacgaaaagcacctaagaaattgtacctaagttttctctttt 51276869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 27926282 - 27926422
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatat--atttttagttaaga 552  Q
    |||||||||| |||||||||||||||||  |||||||||||| ||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  27926282 ttttcgtatggttcttaactaaattcactgtgatttcctcaa-tccataattttctcaaagtttgttatatccaaaaaaaatatgtatttttagttaaga 27926380  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  27926381 accatacgaaaagcacctaaggaattgtacataagttttctc 27926422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 40647258 - 40647117
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatat--ccaaaaaatatatatttttagttaaga 552  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    ||||||||| |||||||||||||||    
T  40647258 ttttcgtatgatttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaaga 40647159  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| || ||||||| ||||||||||||| ||||||||||||    
T  40647158 accacacgaaaagcagctaaggaattgtaactaagttttctc 40647117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 454 - 593
Target Start/End: Original strand, 50162568 - 50162708
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaaga 552  Q
    ||||| ||||| || |||| |||||||||| |||||| ||||||||  |||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  50162568 ttttttgtatggtttttaattaaattcaccgtgattttctcaaatctataattttctcaaagtttgttatatccaaaaaaatatgtaattttagttaaga 50162667  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  50162668 accatacaaaaagcacctaaggaattgtacctaagttttct 50162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 27928329 - 27928468
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaa 553  Q
    |||| ||||| |||||||||||||||||  |||||||||||| ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  27928329 tttttgtatggttcttaactaaattcactgtgatttcctcaa-tccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 27928427  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| |||| ||||||||||||||||| |||||||||||    
T  27928428 ccatacgaaaaacacctaaggaattgtacataagttttctc 27928468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 2125101 - 2125240
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||||||||||||  | ||||   ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  2125101 ttttcgtatggttcttaactaaattcaccatgatttttttaaatttataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaac 2125200  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
     |||| ||||||||||||| |||||||||||| |||||||    
T  2125201 tatacgaaaagcacctaagaaattgtacctaaattttctc 2125240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 455 - 599
Target Start/End: Original strand, 51789628 - 51789770
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || |||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||  || | |||||||||||||||    
T  51789628 ttttcgtatggtttttaactaaattcaccatgatttcctcaattccataattttctcaaagtatgttatatctaaaaa--atgtgtttttagttaagaac 51789725  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctcttttc 599  Q
    ||||| |||||||  ||||||||||||||||||||||||| ||||    
T  51789726 catacgaaaagcatttaaggaattgtacctaagttttctcctttc 51789770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 1387918 - 1387781
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  1387918 ttttcgtatggttcttaactaaagataccatgatttcctcaaattcataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaac 1387819  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| |||||||||||||  |||||||||||    
T  1387818 catacgaaaagca-ctaaggaattgta-gtaagttttctc 1387781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 452 - 566
Target Start/End: Complemental strand, 957732 - 957617
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatc-caaaaaatatatatttttagttaa 550  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||  ||||||||| || ||||||||||    
T  957732 tgtttttcgtatgattcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcaaaaaaaatatgtaattttagttaa 957633  T
Q  551 gaaccatacaaaaagc 566  Q
    ||| ||||| ||||||    
T  957632 gaatcatacgaaaagc 957617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 455 - 573
Target Start/End: Complemental strand, 26208565 - 26208446
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaa 553  Q
    |||||||||| |||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  26208565 ttttcgtatggttctgaactaaattcaccataatttcttcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttgagaa 26208466  T
Q  554 ccatacaaaaagcacctaag 573  Q
    |||||| |||||||||||||    
T  26208465 ccatacgaaaagcacctaag 26208446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 48645045 - 48645183
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  48645045 ttttcgtatgcttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatctaaaaaatatgtatttttagttaagaac 48645144  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    | ||| ||||||||||||  |||||  ||||| |||||||    
T  48645145 c-tacgaaaagcacctaaaaaattgcccctaaattttctc 48645183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 481 - 594
Target Start/End: Complemental strand, 9895367 - 9895254
Alignment:
Q  481 accatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgt 580  Q
    |||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||  |||| |    
T  9895367 accatgatttcctcaaatacataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaaccatacgaaaagtacctaaaaaattat 9895268  T
Q  581 acctaagttttctc 594  Q
    |||||| |||||||    
T  9895267 acctaaattttctc 9895254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 21930521 - 21930381
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaa 550  Q
    ||||||||||||| ||||||||||||||||||||   ||| | |||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  21930521 tgtttttcgtatggttcttaactaaattcaccat---ttctttaaatccataattttcttaaagtttgttatatccaaaaaaatatgtatttttagttaa 21930425  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||| || ||||||||||||| || || ||||||    
T  21930424 gaaccatacgaaaaacaactaaggaattgtaactgaggtttctc 21930381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 455 - 563
Target Start/End: Complemental strand, 27670283 - 27670175
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || ||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||||| |||||||||| ||||||||||||||||     
T  27670283 ttttcgtatggtttttaactaaattcatcatgatttccttaaatccataattttctcaaagttttttatattcaaaaaatatgtatttttagttaagaat 27670184  T
Q  555 catacaaaa 563  Q
    |||||||||    
T  27670183 catacaaaa 27670175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 466 - 591
Target Start/End: Original strand, 22339026 - 22339151
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaag 565  Q
    |||||||||||| ||||||||||||| |||||||| | ||||||||||||| |||| ||||||| |||  | |||||||||||||||||||||  |||||    
T  22339026 ttcttaactaaactcaccatgatttcatcaaatccatcattttctcaaagtctgttctatccaacaaaggtgtatttttagttaagaaccatatgaaaag 22339125  T
Q  566 cacctaaggaattgtacctaagtttt 591  Q
    ||||||| |||||| |||||||||||    
T  22339126 cacctaaagaattgcacctaagtttt 22339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 451 - 591
Target Start/End: Complemental strand, 28244096 - 28243957
Alignment:
Q  451 atgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaa 550  Q
    |||||||| |||| |||||||||||||||||      |||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||    
T  28244096 atgttttttgtataattcttaactaaattca------tttccttaaatccataattttctcaaagtttgttatatccaaaaaagatgtatttttagttaa 28244003  T
Q  551 ga-----accatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||     |||||||||||||||| ||  ||||||||||||||||||    
T  28244002 gaaccaaaccatacaaaaagcacatagagaattgtacctaagtttt 28243957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 454 - 591
Target Start/End: Original strand, 28431732 - 28431871
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa--aaaatatatatttttagttaag 551  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||  ||||||| | ||| ||| ||||||||||  ||||  |||||||||||||||     
T  28431732 tttttcgtatgatttttaactaaattcatcatgatttcttcaaatctataatttttttaaaatttattatatccaaacaaaaggtatatttttagttaaa 28431831  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||| ||||||||| |||||||  |||||||| ||||||||    
T  28431832 aactatacaaaaaacacctaaacaattgtacttaagtttt 28431871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 468 - 564
Target Start/End: Complemental strand, 29598450 - 29598354
Alignment:
Q  468 cttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaa 564  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||  ||||||||| ||||||||||| | |||||||| ||||    
T  29598450 cttaactaaattcactatgatttccttaaatccataattttctcaaagtttgttatattaaaaaaatatgtatttttagttgataaccatacgaaaa 29598354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 455 - 533
Target Start/End: Original strand, 50856352 - 50856430
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa 533  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||| ||||||||||||| ||||||||||||||||||    
T  50856352 ttttcgtatgattcttagctaaattcaccattatttcctcaagtccataattttctcaaaatttgttatatccaaaaaa 50856430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 533
Target Start/End: Original strand, 49284322 - 49284403
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa 533  Q
    ||||||| ||||| ||||||||||||||||||||||||| || |||||| ||||||| ||||||||||||||||||||||||    
T  49284322 tgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttttcaaagtttgttatatccaaaaaa 49284403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 49285078 - 49285145
Alignment:
Q  527 caaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  49285078 caaaagatatgtatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 49285145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 466 - 559
Target Start/End: Complemental strand, 2302532 - 2302439
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatac 559  Q
    |||||||| |||||||||||||||||||||||| | |||||||||||||||| | || |||||| ||| || || |||||||||||||||||||    
T  2302532 ttcttaacaaaattcaccatgatttcctcaaattcataattttctcaaagttcgctacatccaagaaagatgtaattttagttaagaaccatac 2302439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 505 - 590
Target Start/End: Complemental strand, 16755315 - 16755229
Alignment:
Q  505 ttttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccata-caaaaagcacctaaggaattgtacctaagttt 590  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||||||| |||  |||||| |||||||||||||||| |||||||    
T  16755315 ttttttcaaagtttgttatatccaaaacatatgtatttttagttaagaactatatgaaaaagtacctaaggaattgtacgtaagttt 16755229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 27240977 - 27240925
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27240977 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 27240925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 594
Target Start/End: Original strand, 36880625 - 36880681
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  36880625 tatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctc 36880681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 455 - 522
Target Start/End: Complemental strand, 36880651 - 36880584
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgtta 522  Q
    |||||||||| ||||||||||||   |||||||||||||||||||| |||||||||||||||||||||    
T  36880651 ttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcaaagtttgtta 36880584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 451 - 562
Target Start/End: Original strand, 39015220 - 39015331
Alignment:
Q  451 atgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaa 550  Q
    |||| ||||||||| ||||| | | || | ||||||||||| |||||||| |||||||||||||||| |||||| ||| ||||  | |||||| ||||||    
T  39015220 atgtctttcgtatggttctttaattaactaaccatgatttcttcaaatccataattttctcaaagttcgttataaccacaaaaagtgtattttaagttaa 39015319  T
Q  551 gaaccatacaaa 562  Q
    ||||||||||||    
T  39015320 gaaccatacaaa 39015331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 596
Target Start/End: Complemental strand, 19797038 - 19796980
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctt 596  Q
    ||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||    
T  19797038 tatttttagttaaaaaccatacgaaaagcacctaagaaattgtacctaagttttctctt 19796980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 591
Target Start/End: Original strand, 35547737 - 35547867
Alignment:
Q  461 tatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccataca 560  Q
    |||| |||||||||||| ||||||| ||||| | |||||| |||||||||  ||||||| ||||||||||||| || |||||||| || ||||  ||||     
T  35547737 tatggttcttaactaaaatcaccataatttctttaaatccataattttctataagtttgatatatccaaaaaaaatgtatttttaatttagaatgatacg 35547836  T
Q  561 aaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||  ||| ||||||||| ||| ||||    
T  35547837 aaaagcatttaaagaattgtacataaatttt 35547867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 521 - 594
Target Start/End: Complemental strand, 36880363 - 36880290
Alignment:
Q  521 tatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||| |||||||||||| ||||||||| |||| ||| |||  ||||||||||||||||||||    
T  36880363 tatatccaaaaaatatgtatttttagttaggaaccatacgaaaaacacttaaaaaattgtacctaagttttctc 36880290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 50627244 - 50627301
Alignment:
Q  537 atatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||    
T  50627244 atatttttagttaagaaccatacgaaaagcatataaggaattgtacctaagttttctc 50627301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 1387896 - 1387948
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  1387896 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttctc 1387948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 598
Target Start/End: Complemental strand, 3607782 - 3607726
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    |||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||    
T  3607782 tttagttaagaaccatacaaaaagcacctaagaaattctacctaaattttctctttt 3607726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 16518329 - 16518468
Alignment:
Q  455 ttttcgtatgattcttaactaaat--tcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatata-tttttagttaag 551  Q
    |||| ||||| || ||||||||||  ||||||| |||| ||||| | | ||||||||||| |||||||| ||||||||||| || || |||||  |||||    
T  16518329 ttttggtatggtttttaactaaatattcaccataattttctcaattacataattttctcatagtttgttgtatccaaaaaagatctatttttttattaag 16518428  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||| ||||| | |||| |||||| |||||||||||    
T  16518429 aaccatacgaaaagtatctaaagaattgcacctaagtttt 16518468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 29598455 - 29598507
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  29598455 tttagttaagaaccatacaaaaagtacctaacgaattgtacctaagttttctc 29598507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 47940623 - 47940571
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  47940623 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 47940571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 543 - 594
Target Start/End: Original strand, 25297966 - 25298017
Alignment:
Q  543 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctc 25298017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 504 - 591
Target Start/End: Original strand, 28447953 - 28448040
Alignment:
Q  504 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||| |||| | || |||| ||  ||| ||||||||||||||||||    
T  28447953 attttctcaaagtttgttatattaaaaaaagatatatttttagttatgaactaaacgaaaaacatataaagaattgtacctaagtttt 28448040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 27928351 - 27928302
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  27928351 tttagttaagaaccatacaaaaagcacataaggaattgtatctaagtttt 27928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 2854585 - 2854533
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  2854585 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctc 2854533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 19954964 - 19954912
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||||||||||    
T  19954964 tttagttaagaactatacgaaaagcacataaggaattgtacctaagttttctc 19954912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 23698555 - 23698503
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||||||||    
T  23698555 tttagttaagaaccatacgaaaagtatctaaggaattgtacctaagttttctc 23698503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 27926304 - 27926252
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||||||||||    
T  27926304 tttagttaagaaccatacgaaaagcacataaggaattatacctaagttttctc 27926252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 452 - 524
Target Start/End: Original strand, 36007848 - 36007920
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttata 524  Q
    ||||||| ||| | |||||||||||| |  ||||||||||||||||| | |||||||||||||||||||||||    
T  36007848 tgtttttggtacggttcttaactaaactatccatgatttcctcaaatacataattttctcaaagtttgttata 36007920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 40647236 - 40647288
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||||||    
T  40647236 tttagttaaaaatcatacgaaaagcacctaaggaattgtacctaagttttctc 40647288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 42561348 - 42561296
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  42561348 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagatttctc 42561296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 48954267 - 48954215
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  48954267 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctc 48954215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 51789650 - 51789598
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  51789650 tttagttaaaaaccatacgaaaatcacctaaggaattgtacctaagttttctc 51789598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 465 - 591
Target Start/End: Original strand, 5059603 - 5059727
Alignment:
Q  465 attcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaa 564  Q
    |||||||| |||||| ||||| ||||  | |||||| ||||||| |||||||||||||||||  ||||| || ||||||||  ||| |||||||| |||     
T  5059603 attcttaattaaatttaccataatttttttaaatccataattttatcaaagtttgttatatcataaaaaaatgtatttttacctaataaccatacgaaa- 5059701  T
Q  565 gcacctaaggaattgtacctaagtttt 591  Q
     ||| | | ||||||||||||||||||    
T  5059702 -cacatcaagaattgtacctaagtttt 5059727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 542 - 593
Target Start/End: Original strand, 5189587 - 5189638
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  5189587 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaaattttct 5189638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 542 - 593
Target Start/End: Complemental strand, 14387068 - 14387017
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  14387068 tttagttaagaaccatacgaaatgcatctaaggaattgtacctaagttttct 14387017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 554
Target Start/End: Original strand, 18651310 - 18651380
Alignment:
Q  484 atgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| | |||||| || |||||||| ||||||||    
T  18651310 atgatttccccaaatccataattttctcaaaatttgttataactaaaaaaaatgtatttttatttaagaac 18651380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 452 - 533
Target Start/End: Original strand, 48958235 - 48958315
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa 533  Q
    ||||||| ||||||||||| | |||||||| ||| ||||| | |||| | |||||||||| |||||||||||||||||||||    
T  48958235 tgtttttggtatgattcttgattaaattcatcataatttctttaaatacataattttctc-aagtttgttatatccaaaaaa 48958315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 49284347 - 49284298
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  49284347 tttagttaagaaccatacaaaaaacaactaagaaattgtacctaagtttt 49284298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 362475 - 362527
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||| |||||||    
T  362475 tttagttaagaatcatacgaaaagcacctaaagaattgtacctaaattttctc 362527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 9978104 - 9978052
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||| |||||||    
T  9978104 tttagttaagaatcatacgaaaagcacataaggaattgtacctaaattttctc 9978052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 21930496 - 21930548
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||| |||||||| |||||||||||| |||||||    
T  21930496 tttagttaagaaccatacgaaaaacacctaagtaattgtacctaaattttctc 21930548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 26208543 - 26208595
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||| |||||||||| |||||||||||||||||| ||| |||||||||||    
T  26208543 tttagttcagaaccatacgaaaagcacctaaggaattatacataagttttctc 26208595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 50162591 - 50162539
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| |||| |||||||||||||  ||||||||||||||||||||||||||||    
T  50162591 tttaattaaaaaccatacaaaaaatacctaaggaattgtacctaagttttctc 50162539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 542 - 593
Target Start/End: Original strand, 15324745 - 15324796
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||| ||||||    
T  15324745 tttagttaagaaccatacgaaaagcacataaggaattgtacataaattttct 15324796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 536 - 591
Target Start/End: Original strand, 28823217 - 28823272
Alignment:
Q  536 tatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||||||||||| | |||||| ||||||| |||| ||||    
T  28823217 tatatttttagttaagaaccatacaaaaaactcctaagaaattgtatctaaatttt 28823272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 591
Target Start/End: Original strand, 32029579 - 32029685
Alignment:
Q  486 gatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatac-aaaaagcacctaaggaattgtacct 584  Q
    ||||||||||||||||||||||||||| | |||||||||  || |||| ||| ||||| ||| || ||| | || ||||| ||||||| ||| || ||||    
T  32029579 gatttcctcaaatccgtaattttctcagaatttgttataatcacaaaaaataaattttaagtgaataacaacacgaaaaaacacctaacgaaatgcacct 32029678  T
Q  585 aagtttt 591  Q
    |||||||    
T  32029679 aagtttt 32029685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 16518351 - 16518302
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||| |||||||| ||||||||||||| ||||| |||||||||||    
T  16518351 tttagttaaaaaccataccaaaagcacctaagaaattgcacctaagtttt 16518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 455 - 491
Target Start/End: Complemental strand, 362497 - 362461
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttc 491  Q
    ||||||||||||||||||||||||| |||||||||||    
T  362497 ttttcgtatgattcttaactaaatttaccatgatttc 362461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 2125123 - 2125071
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||||||| |||| ||||||| |||| |||||||    
T  2125123 tttagttaagaaccatacgaaaagcacataagaaattgtaactaaattttctc 2125071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 564
Target Start/End: Complemental strand, 10262515 - 10262411
Alignment:
Q  460 gtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatac 559  Q
    ||||||||||||||| || |   ||||||||  ||||||||  |||||| ||| |||||| ||||| || |||| ||||| ||||||||||||| |||||    
T  10262515 gtatgattcttaactcaactactcatgattttttcaaatccacaattttttcagagtttgctatattcacaaaaaatatagttttagttaagaatcatac 10262416  T
Q  560 aaaaa 564  Q
     ||||    
T  10262415 gaaaa 10262411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 51276748 - 51276696
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||| | |||| ||||||| |||||||    
T  51276748 tttagttaagaaccatacgaaaagcacctatgaaattatacctaaattttctc 51276696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 454 - 564
Target Start/End: Complemental strand, 3767796 - 3767687
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 553  Q
    |||||||| |||||||||||||||| |  |||||||| || ||||||  |||||||| ||||||||| | | ||| |||  || |||||||||| |||||    
T  3767796 tttttcgtgtgattcttaactaaatac-tcatgattttcttaaatccacaattttcttaaagtttgtcaaaaccacaaataatgtatttttagtcaagaa 3767698  T
Q  554 ccatacaaaaa 564  Q
     ||||| ||||    
T  3767697 tcatacgaaaa 3767687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 594
Target Start/End: Complemental strand, 25297968 - 25297923
Alignment:
Q  548 taagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  25297968 taagaatcatacgaaaagcacctaaggaattgta-ctaagttttctc 25297923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 957707 - 957756
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||| ||||| |||| |||||||| ||||||| |||||||||    
T  957707 tttagttaagaatcatacgaaaaacacctaagaaattgtatctaagtttt 957756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 27670261 - 27670314
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgt-acctaagttttctc 594  Q
    ||||||||| |||||||| |||||||| |||||||||||  |||||||||||||    
T  27670261 tttagttaaaaaccatacgaaaagcacataaggaattgtgccctaagttttctc 27670314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 539 - 591
Target Start/End: Original strand, 46691208 - 46691261
Alignment:
Q  539 atttttagttaagaaccataca-aaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||| ||||||||| |||| || |||| ||||||||||||||||||    
T  46691208 atttttagttaaaaaccatacagaaaaacatctaaagaattgtacctaagtttt 46691261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 50856374 - 50856325
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||| |||||| ||||| |||||||||||| ||||| ||||||||||||    
T  50856374 tttagctaagaatcatacgaaaagcacctaaagaattttacctaagtttt 50856325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 3e-59; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 24836160 - 24836021
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  24836160 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttnagaac 24836061  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  24836060 catacgaaaagcacctaagcaattgtacctaagttttctc 24836021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 30259097 - 30259236
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30259097 ttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 30259196  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  30259197 catacaaaaagcacccaaggaattgtacctaagttttctc 30259236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 30594833 - 30594694
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30594833 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 30594734  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
     || | ||||||||||||||||||||||||||||||||||    
T  30594733 tatgcgaaaagcacctaaggaattgtacctaagttttctc 30594694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 20184269 - 20184409
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaa 553  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  20184269 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 20184368  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
     ||||| ||||||| ||||||||||||||||||||||||||    
T  20184369 tcatacgaaaagcagctaaggaattgtacctaagttttctc 20184409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 34052419 - 34052280
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34052419 ttttcgtatggttcttagctaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 34052320  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  34052319 catacgaaaagcacctaaggaaatgtacctaagttttctc 34052280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 31231645 - 31231786
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatat--ccaaaaaatatatatttttagttaaga 552  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  31231645 tttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatgtccaaaaaatatgtatttttagttaaga 31231744  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  31231745 accatacgaaaagcacctaaggaattgtacctaagttttctc 31231786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 3953073 - 3953212
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  3953073 ttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttatatccaaaaaatatgtatttttagttaagaac 3953172  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||| ||||||| ||||||| ||||||||||||    
T  3953173 catacaaaaagtacctaagtaattgtatctaagttttctc 3953212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 10936501 - 10936640
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||| | |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  10936501 ttttcgtacggttcttaactaaattcaccatgacttcctcaaatctataattttctcaaagtttgttataaccaaaaaatatgtatttttagttaagaac 10936600  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  10936601 catacgaaaagcacctaaggaattgtacctaagttttctc 10936640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 455 - 600
Target Start/End: Original strand, 35339309 - 35339454
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  35339309 ttttcgtatggttcttaactaaattcatcatgatttcttcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttatttaagaac 35339408  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctcttttct 600  Q
    ||||| ||||| || |||||||||||||||||||||||| ||||||    
T  35339409 catacgaaaagtacataaggaattgtacctaagttttctattttct 35339454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 12142336 - 12142193
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaa-atatatatttttagttaa 550  Q
    ||||||||||||  ||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  12142336 tgtttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagattgttatatccaaaaatatatatatttttagttaa 12142237  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||  ||||||| |||||||||||||||||||||||||    
T  12142236 gaaccatacccaaagcacgtaaggaattgtacctaagttttctc 12142193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 38883361 - 38883222
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38883361 ttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 38883262  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  38883261 catacgaaaagcatctaaggaattgtacctaagttttctc 38883222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 45997539 - 45997678
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  45997539 tttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaac 45997638  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||  ||| |||||||||||||| ||||| ||||||||    
T  45997639 catacctaaaacacctaaggaattgcacctaggttttctc 45997678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 451 - 594
Target Start/End: Original strand, 39617868 - 39618011
Alignment:
Q  451 atgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagtta 549  Q
    ||||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  39617868 atgttcttcgtatggttcttaactaaattcaccatgatttcctccaatccataattttctcaaagtttgttatatccaaaaaaatatttatttttagtta 39617967  T
Q  550 agaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||| |||||||||||| |||||||| ||||||||||||    
T  39617968 agaactatacgaaaagcacctaaagaattgta-ctaagttttctc 39618011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 37093908 - 37093769
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||     
T  37093908 ttttcgtatggtttttaactaaattcaccatgatttcctcaaatttataattttctcaaagtttgttatatccaaaaaatatatatttttaattaagaat 37093809  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||  ||||||| |||||||||||| |||||||    
T  37093808 catacgaaaaatacctaagaaattgtacctaaattttctc 37093769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 9285745 - 9285884
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  9285745 tttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaac 9285844  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| |||||| ||||||||||||| |||||||    
T  9285845 catacgaaaagtacctaaagaattgtacctaaattttctc 9285884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 9289812 - 9289951
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  9289812 tttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaac 9289911  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| |||||| ||||||||||||| |||||||    
T  9289912 catacgaaaagtacctaaagaattgtacctaaattttctc 9289951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 454 - 594
Target Start/End: Complemental strand, 29277978 - 29277839
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 553  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||||  |||||||||||| |||||| ||||||||| |  | ||||||||||||||||    
T  29277978 ttttccgtatgatttttaactaaattcaccatgatttccttaaatccaaaattttctcaaactttgttgtatccaaaaca-gtgtatttttagttaagaa 29277880  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  29277879 ccatacaaaaagtacctaaagaattgtacctaagttttctc 29277839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 455 - 599
Target Start/End: Complemental strand, 48103505 - 48103364
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| |||||||||||||||    |||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||||||     
T  48103505 tttttgtatggttcttaactaaattcg---tgatttcctcaaatccataataatctcaaagtttgttatatccaaaaaatatgtatttttagttaagaat 48103409  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctcttttc 599  Q
    ||||| |||| |||||||| |||||||||||||||||||| ||||    
T  48103408 catacgaaaaacacctaagaaattgtacctaagttttctcctttc 48103364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 25742463 - 25742601
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    |||||||| |||| ||||||||||||||||     |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||     
T  25742463 tgtttttcctatggttcttaactaaattcat----atttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaac 25742558  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| |||||||| |||| ||||| || |||||||||||    
T  25742559 aaccatacgaaaagcacttaagaaattgcacttaagttttctc 25742601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 455 - 564
Target Start/End: Complemental strand, 40358255 - 40358146
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  40358255 ttttcctatgattcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatcaaaaaaatatgcatttttagttaagaac 40358156  T
Q  555 catacaaaaa 564  Q
    ||||| ||||    
T  40358155 catacgaaaa 40358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 504 - 595
Target Start/End: Original strand, 35665696 - 35665787
Alignment:
Q  504 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctct 595  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  35665696 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaagcacctaaggaattgtacctaagttttctct 35665787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 478 - 594
Target Start/End: Original strand, 38528464 - 38528582
Alignment:
Q  478 ttcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatat--atttttagttaagaaccatacaaaaagcacctaagga 575  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||||  |||||| ||||  ||||||||||||||||||||| |||||||||||||||    
T  38528464 ttcaccatgaattcctcgaatccataattttctcaaagtttgttatataaaaaaaaaatatgtatttttagttaagaaccatacgaaaagcacctaagga 38528563  T
Q  576 attgtacctaagttttctc 594  Q
    |||||||||||||||||||    
T  38528564 attgtacctaagttttctc 38528582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 39143743 - 39143876
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||| |||| |||||||||||||||||||      ||||||||| | |||||||||||    
T  39143743 ttttcgtatggttcttgactaaattcaccataatttcctcaaatccataatattctcaaagtttgttatat------aatatatatatatagttaagaac 39143836  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||| ||||||| |||||||||||||||||||||    
T  39143837 catacgaaaaacacctaatgaattgtacctaagttttctc 39143876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 31521556 - 31521690
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||| |||||||||| ||||||| | ||||||| ||||||||| |||||||||||||||||  ||||||||||||||      
T  31521556 ttttcgtatggttcttaactaaatttaccatgattttctcaaattcataattttttcaaagtttattatatccaaaaaatattcatttttagttaaga-- 31521653  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
       || ||||| |||| ||||||| |||||||||||||||    
T  31521654 ---acgaaaagtacctgaggaattatacctaagttttctc 31521690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 454 - 591
Target Start/End: Original strand, 16876486 - 16876623
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 553  Q
    ||||||||||| ||||||  |||||| |||||||||| ||||||||||||||||||| | ||||||||||||||| |||  ||||||||||||| || ||    
T  16876486 tttttcgtatggttcttacttaaatttaccatgattttctcaaatccgtaattttcttagagtttgttatatccataaaggatatatttttagtcaaaaa 16876585  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||| |||||| |  |||  ||||||||| |||||||    
T  16876586 ccatataaaaagtagttaaaaaattgtacccaagtttt 16876623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 487 - 594
Target Start/End: Original strand, 47237488 - 47237598
Alignment:
Q  487 atttcctcaaatccgtaattttctcaaagtttgttatat---ccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 583  Q
    |||||||| ||||| ||||||||||||||||||||||||     |||||| || |||||||||||||||||||||| |||||||||| || |||||||||    
T  47237488 atttcctcgaatccataattttctcaaagtttgttatataaaaaaaaaaaaatgtatttttagttaagaaccatacgaaaagcaccttagaaattgtacc 47237587  T
Q  584 taagttttctc 594  Q
    |||||||||||    
T  47237588 taagttttctc 47237598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 454 - 591
Target Start/End: Complemental strand, 33749785 - 33749648
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatat-atatttttagttaaga 552  Q
    ||||| ||||| |||||||||||||||| ||||||||||| |||| | ||||||||||||||||| ||||||| |||||  || ||||||||||||||||    
T  33749785 ttttttgtatggttcttaactaaattcatcatgatttccttaaattcataattttctcaaagtttattatatctaaaaataatgatatttttagttaaga 33749686  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    | ||||| ||||  |||||| ||||| || |||||||||    
T  33749685 atcatacgaaaaatacctaaagaattata-ctaagtttt 33749648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 455 - 565
Target Start/End: Original strand, 24123786 - 24123898
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc--aaaaaatatatatttttagttaaga 552  Q
    |||| ||||| ||| ||||||||   || ||||||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||| ||||||    
T  24123786 tttttgtatggttcctaactaaaaatactatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaaatatgtatttttaattaaga 24123885  T
Q  553 accatacaaaaag 565  Q
    ||||||| |||||    
T  24123886 accatacgaaaag 24123898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 460 - 576
Target Start/End: Complemental strand, 7955116 - 7955000
Alignment:
Q  460 gtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatac 559  Q
    ||||| ||| |||||||||| | |||||||||| ||||||  |||| |||||  ||||| ||||||  |||||| || ||||||||||||||||||||||    
T  7955116 gtatggttcataactaaatttatcatgatttccacaaatctataatcttctctgagttttttatataaaaaaaaaatgtatttttagttaagaaccatac 7955017  T
Q  560 aaaaagcacctaaggaa 576  Q
    ||||||||| |||||||    
T  7955016 aaaaagcacataaggaa 7955000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 31231667 - 31231615
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31231667 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 31231615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 528 - 598
Target Start/End: Complemental strand, 38528457 - 38528387
Alignment:
Q  528 aaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||| |||| ||||||    
T  38528457 aaaaaatatgtatttttagttaagaaccatacaaaaagcatttaaggaattgtacctaacttttatctttt 38528387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 38883334 - 38883391
Alignment:
Q  537 atatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  38883334 atatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctc 38883391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 24836138 - 24836190
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24836138 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 24836190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 35339331 - 35339279
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35339331 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 35339279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 35665690 - 35665634
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  35665690 tatttttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttctc 35665634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 452 - 591
Target Start/End: Original strand, 22723254 - 22723396
Alignment:
Q  452 tgtttttcgtatgattcttaactaaat--tcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatata-tttttagtt 548  Q
    |||||||||||||||||||||||||||  ||| | ||||||||| ||||   |||||||||||||||||||||||  ||||||| || || |||||| ||    
T  22723254 tgtttttcgtatgattcttaactaaatattcatcgtgatttccttaaatttttaattttctcaaagtttgttatactcaaaaaagatgtattttttaatt 22723353  T
Q  549 aagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    || |||||||  ||||||| |||| ||||| ||  ||||||||    
T  22723354 aaaaaccataggaaaagcatctaaagaattatatgtaagtttt 22723396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 543 - 594
Target Start/End: Complemental strand, 33721879 - 33721828
Alignment:
Q  543 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 33721828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 484 - 591
Target Start/End: Original strand, 40596746 - 40596852
Alignment:
Q  484 atgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 583  Q
    |||| |||||| ||||| ||||||| ||||||||||||||| | ||||||  | ||||||||||||||||||||||||||| ||||||| ||| ||| ||    
T  40596746 atgacttcctcgaatccataatttt-tcaaagtttgttataacaaaaaaagttgtatttttagttaagaaccatacaaaaaacacctaaagaaatgtgcc 40596844  T
Q  584 taagtttt 591  Q
    ||| ||||    
T  40596845 taaatttt 40596852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 20184291 - 20184239
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  20184291 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctc 20184239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 34052397 - 34052449
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  34052397 tttagctaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 34052449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 455 - 533
Target Start/End: Complemental strand, 10398459 - 10398381
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa 533  Q
    |||| ||||| ||||||||||||||  ||||||||||||||||| | |||| |||||||||||||||||| | ||||||    
T  10398459 tttttgtatggttcttaactaaattatccatgatttcctcaaatacataatcttctcaaagtttgttataacaaaaaaa 10398381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 30259119 - 30259070
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  30259119 tttagttaagaaccataggaaaagcacctaaggaattgtacctaagtttt 30259070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 9285767 - 9285715
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  9285767 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctc 9285715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 9289834 - 9289782
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  9289834 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctc 9289782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 10936523 - 10936471
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  10936523 tttagttaagaaccgtacgaaaagcacctaaggaattgtacataagttttctc 10936471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 24123812 - 24123756
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||    
T  24123812 tatttttagttaggaaccatacaaaaagtacataaggaattgtacctaaattttctc 24123756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 45997561 - 45997509
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||| || | ||||||||||||||||||||    
T  45997561 tttagttaagaaccatacaaaaagcacatatgaaattgtacctaagttttctc 45997509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 48103483 - 48103535
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  48103483 tttagttaagaaccatacaaaaagcacctaaagaattgtagataagttttctc 48103535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 592
Target Start/End: Original strand, 30594811 - 30594861
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttc 592  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  30594811 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagctttc 30594861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 3953095 - 3953043
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||||||| ||||| || |||||||||||||||||||||||||    
T  3953095 tttagttaaaaaccatacgaaaagtacataaggaattgtacctaagttttctc 3953043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 594
Target Start/End: Complemental strand, 17101699 - 17101655
Alignment:
Q  550 agaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  17101699 agaaccatacgaaaagcacctaagaaattgtacctaagttttctc 17101655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 594
Target Start/End: Original strand, 17101700 - 17101744
Alignment:
Q  550 agaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  17101700 agaaccatacgaaaagcacctaagaaattgtacctaagttttctc 17101744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 471 - 558
Target Start/End: Complemental strand, 1072358 - 1072271
Alignment:
Q  471 aactaaattcaccatg--atttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccata 558  Q
    ||||||||||||||||  |||||||||||||  |||||| |||  ||||||||||||  |||||| || |||||||| ||||||||||||    
T  1072358 aactaaattcaccatgtgatttcctcaaatctataatttcctctgagtttgttatat--aaaaaaaatgtatttttaattaagaaccata 1072271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 482 - 576
Target Start/End: Complemental strand, 1403032 - 1402937
Alignment:
Q  482 ccatgatttcctcaaatccgtaattttctcaaagtttgttatatcca-aaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaa 576  Q
    ||||||||||||||||||  ||||||||||||| ||||||||| ||| |||||  || ||||| ||| |||||| | || ||||| ||||||||||    
T  1403032 ccatgatttcctcaaatctataattttctcaaaatttgttataaccacaaaaaagtaaattttaagtgaagaacaacacgaaaagtacctaaggaa 1402937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 454 - 553
Target Start/End: Original strand, 32482244 - 32482343
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 553  Q
    ||||| ||||||||| ||||||||||   |||||||| |||||||||  |||||| | |||| |||||||| | | |||| || ||||||||||||||||    
T  32482244 ttttttgtatgattcctaactaaattactcatgattttctcaaatccacaatttttttaaaggttgttataacaacaaaaaatgtatttttagttaagaa 32482343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 466 - 520
Target Start/End: Complemental strand, 44148776 - 44148722
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgt 520  Q
    ||||||| |||||||||  ||||||||| |||||| |||||||||||||||||||    
T  44148776 ttcttaattaaattcactgtgatttccttaaatccataattttctcaaagtttgt 44148722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 10398437 - 10398486
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||||||||  ||||||| || |||||||||||    
T  10398437 tttagttaagaaccatacaaaaagcatataaggaaatgcacctaagtttt 10398486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 547 - 596
Target Start/End: Complemental strand, 11486912 - 11486863
Alignment:
Q  547 ttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctt 596  Q
    ||||||||||||| ||||||| ||||| ||||||||||||| ||||||||    
T  11486912 ttaagaaccatacgaaaagcatctaagaaattgtacctaagctttctctt 11486863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 454 - 591
Target Start/End: Original strand, 38989101 - 38989241
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa--tatatatttttagttaag 551  Q
    ||||||||||  || ||||||||||| | ||| |||| || |||||  ||||||||||||||||||||||||| || | |  | | |||||| ||||||     
T  38989101 tttttcgtatagtttttaactaaatttatcataattttcttaaatctataattttctcaaagtttgttatatctaatataggtgtgtattttcagttaat 38989200  T
Q  552 aaccatac-aaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||| ||||| |||||||  | |||||||||| ||||    
T  38989201 aaccatacgaaaaaacacctaaaaatttgtacctaaatttt 38989241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 595
Target Start/End: Complemental strand, 39143765 - 39143712
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctct 595  Q
    |||||| ||||||||||| ||||||| | || ||||||||||||||||||||||    
T  39143765 tttagtcaagaaccatacgaaaagcatccaatgaattgtacctaagttttctct 39143712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 25742488 - 25742436
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  |||| |||||||| |||||||| |||||||||||    
T  25742488 tttagttaagaaccataggaaaaacacctaagaaattgtacataagttttctc 25742436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 39617894 - 39617842
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| || | || ||||| ||||||||||||||||||||    
T  39617894 tttagttaagaaccatacgaagaacatctaagaaattgtacctaagttttctc 39617842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 47237485 - 47237434
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  |||||||||| ||||||| |||||||||||||||    
T  47237485 tttagttaagaaccataggaaaagcacct-aggaattatacctaagttttctc 47237434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 572
Target Start/End: Original strand, 4453188 - 4453246
Alignment:
Q  516 tttgttatatccaaaaaatatatatttttagttaagaacc--atacaaaaagcacctaa 572  Q
    |||| ||||||| |||||| | ||||||||||||||||||  |||||||||||||||||    
T  4453188 tttgctatatccgaaaaatgtgtatttttagttaagaaccatatacaaaaagcacctaa 4453246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 482 - 524
Target Start/End: Complemental strand, 25572925 - 25572883
Alignment:
Q  482 ccatgatttcctcaaatccgtaattttctcaaagtttgttata 524  Q
    |||||||||| ||||| || |||||||||||||||||||||||    
T  25572925 ccatgatttcttcaaaaccataattttctcaaagtttgttata 25572883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 28723616 - 28723567
Alignment:
Q  505 ttttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||||||| ||||||||| ||||| | |||||||||||||||||    
T  28723616 ttttttcaaagtttattatatccataaaatgtgtatttttagttaagaac 28723567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 595
Target Start/End: Complemental strand, 31521578 - 31521526
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctct 595  Q
    |||||||||||||||||| ||||||| ||||| ||||||| |||| ||||||||    
T  31521578 tttagttaagaaccatacgaaaagcatctaagaaattgta-ctaaattttctct 31521526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 40358233 - 40358288
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaagga---attgtacctaagttttctc 594  Q
    |||||||||||| ||||  |||||||||||||||   |||||||||||||||||||    
T  40358233 tttagttaagaatcataggaaaagcacctaaggaggaattgtacctaagttttctc 40358288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 1e-58; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 451 - 594
Target Start/End: Complemental strand, 8210467 - 8210324
Alignment:
Q  451 atgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaa 550  Q
    |||||||| |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8210467 atgttttttgtatgattcttaaccaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatatatatttagttaa 8210368  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||    
T  8210367 gaatcatacgaaaagcacctaaggaattgtacctaagttttctc 8210324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 15882341 - 15882201
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaa 553  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  15882341 ttttcgtatggttcttaactaaattcaccatgattttctcaaatccataatattctcaaagttagttatatccaaaaaaatatgtatttttagttaagaa 15882242  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15882241 ccatacaaaaagcacctaaggaattgtacctaagttttctc 15882201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 23940835 - 23940975
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttata-tccaaaaaatatatatttttagttaagaa 553  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| ||||||||||||| ||    
T  23940835 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatttaaaaaaatatgtatttttagttaaaaa 23940934  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  23940935 ccatacgaaaagcacctaaggaattgtaactaagttttctc 23940975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 451 - 595
Target Start/End: Complemental strand, 37114382 - 37114238
Alignment:
Q  451 atgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaa 550  Q
    |||||||| ||||| ||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  37114382 atgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttctcaaagtttattatatccaaaaaatatgtatttttaattaa 37114283  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctct 595  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  37114282 gaaccatacgaaaagcacctaaggaattgtacctaagttttctct 37114238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 455 - 599
Target Start/End: Complemental strand, 38520158 - 38520014
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38520158 ttttcgtatgttttttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 38520059  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctcttttc 599  Q
    ||||| ||||||| |||||||||| ||||||| ||||||| ||||    
T  38520058 catacgaaaagcaactaaggaattatacctaaattttctcctttc 38520014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 29780990 - 29781129
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29780990 ttttcgtatggtttttaactaaatttaccataatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 29781089  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| ||||||||||| ||||||||||||||    
T  29781090 catacgaaaagcatctaaggaattggacctaagttttctc 29781129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 17426659 - 17426800
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc--aaaaaatatatatttttagttaaga 552  Q
    |||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  17426659 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatctataattttctcaaagtttgttatatccaaaaaaaatatacatttttagttaaga 17426758  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||| ||||||||||||  ||||||||||||||||||||    
T  17426759 accatacgaaaagcacctaaaaaattgtacctaagttttctc 17426800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 38629617 - 38629475
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  38629617 tgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattatatccaaaaaatatgtatttttagttaag 38629518  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| |||||||  ||| ||||||||| ||| |||||||    
T  38629517 aaccatacgaaaagcatttaaagaattgtacttaaattttctc 38629475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 455 - 572
Target Start/End: Complemental strand, 40891153 - 40891036
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40891153 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 40891054  T
Q  555 catacaaaaagcacctaa 572  Q
    | ||| |||| |||||||    
T  40891053 cgtacgaaaaacacctaa 40891036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 12234607 - 12234467
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagttt-gttatatccaaaaaatatatatttttagttaagaa 553  Q
    |||||||||| || |||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  12234607 ttttcgtatggttattaactaaattcacgatgatttcctcaaattcataattttctcaaagttttgttatatccaaaaaatatgtatttttagttaagaa 12234508  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||||||| || ||||| |||||||||||||||    
T  12234507 ccatacgaaaagcacccaaagaattatacctaagttttctc 12234467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 24211309 - 24211448
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||| |||||||||| | ||||||| || ||| ||||||||||| ||||||||||||| ||||||||| ||||| || ||||||||    
T  24211309 ttttcgtatggttcttaattaaattcaccgtaatttccttaattccataattttctcatagtttgttatatctaaaaaatatgtatttctatttaagaac 24211408  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  24211409 catacgaaaagcacctaaggaattgtacctaagttttctc 24211448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 455 - 598
Target Start/End: Original strand, 33100676 - 33100819
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   ||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||||||    
T  33100676 ttttcgtatggttcttaactaaaaataccgttatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtttttttagttaagaac 33100775  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    | ||| |||||||| |||| ||||||||||||||||||||||||    
T  33100776 cgtacgaaaagcacataagaaattgtacctaagttttctctttt 33100819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 11828624 - 11828773
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatc-------caaaaaatatatattttt 544  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||        ||||||||| |||||||    
T  11828624 tgtttttcgtatggttcttaactaaattcaccataatttcctcaaatccattattttctcaaagtttgttatatctaacaaaaaaaaaatatgtattttt 11828723  T
Q  545 agttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||| |||  |||||||  |||||||||||||||||||||||||    
T  11828724 agttaagaacgatatgaaaagcaagtaaggaattgtacctaagttttctc 11828773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 591
Target Start/End: Complemental strand, 35467310 - 35467175
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||| ||||||||| | |||||| ||||||||| |||||||||||  ||||||||| || |||||||||||||||||    
T  35467310 ttttcgtatggttcttaactaaattcatcatgatttctttaaatccataattttcttaaagtttgtta-ctccaaaaaagatgtatttttagttaagaac 35467212  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    || |||||||| | |||| ||||||||||||||||||    
T  35467211 cacacaaaaagtatctaaagaattgtacctaagtttt 35467175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 455 - 558
Target Start/End: Original strand, 4262007 - 4262110
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  4262007 ttttcgtatggttcttaactaaattcactatgatttcctcaagtccataattttctcaaagtttgttatattcaaaaaatatgtatttttaattaagaac 4262106  T
Q  555 cata 558  Q
    ||||    
T  4262107 cata 4262110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 452 - 591
Target Start/End: Complemental strand, 38405282 - 38405142
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaa 550  Q
    ||||||| ||||| ||||||||||||||||  ||||||| || |||| |||||||||||||||||||||||||||||| |||| || |||||||||||||    
T  38405282 tgttttttgtatggttcttaactaaattcataatgattttcttaaattcgtaattttctcaaagtttgttatatccaaaaaaagatgtatttttagttaa 38405183  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||| || ||   |||||||||||| ||||    
T  38405182 gaaccatacaaaaagtacttacataattgtacctaaatttt 38405142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 504 - 594
Target Start/End: Complemental strand, 4035832 - 4035742
Alignment:
Q  504 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||    
T  4035832 attttctcaaaatttgttatatccaaaaaatatatatttttagttaagtaccatacgaaaagcacctgaggaactgtacctaagttttctc 4035742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 583
Target Start/End: Original strand, 24741854 - 24741982
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||| ||| | |  | |||||||||||||||||    
T  24741854 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccatgattttctcagagtttattatatgcaacataggtgtatttttagttaagaac 24741953  T
Q  555 catacaaaaagcacctaaggaattgtacc 583  Q
    ||||| |||| ||||| | ||||||||||    
T  24741954 catacgaaaatcacctcaagaattgtacc 24741982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 14834703 - 14834838
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagtt--aaga 552  Q
    |||||||||| ||||||||||||||||||||||||| || |||| | |||||   |||||||||||||||| ||||||| || |||||||||||  || |    
T  14834703 ttttcgtatggttcttaactaaattcaccatgattttcttaaattcataatt---tcaaagtttgttatatacaaaaaagatgtatttttagttaaaaaa 14834799  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||| ||| ||||| |||||  ||||||||| ||||||||    
T  14834800 accgtacgaaaagtacctagagaattgtacttaagtttt 14834838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 461 - 558
Target Start/End: Complemental strand, 40393856 - 40393760
Alignment:
Q  461 tatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccata 558  Q
    |||| |||||| ||||||||||||| ||||||||||||   ||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||||    
T  40393856 tatggttcttagctaaattcaccataatttcctcaaattt-taattttctcaaaatttgttatatcccaaaaatatgtatttttagttaagaatcata 40393760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 15882319 - 15882371
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15882319 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 15882371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 33100702 - 33100646
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  33100702 tatttttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 33100646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 542 - 593
Target Start/End: Original strand, 40891131 - 40891182
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40891131 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 40891182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 484 - 566
Target Start/End: Complemental strand, 10778768 - 10778686
Alignment:
Q  484 atgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagc 566  Q
    ||||||||||||||| |  ||| |||||||||||||||||| ||| |||| || |||||||||||||||||||||| ||||||    
T  10778768 atgatttcctcaaattcacaatcttctcaaagtttgttatagccacaaaaaatgtatttttagttaagaaccatacgaaaagc 10778686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 455 - 595
Target Start/End: Original strand, 5356154 - 5356295
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctc-aaagtttgttatatccaaaaaatatatatttttagttaagaa 553  Q
    |||||| ||| ||||| |||||||||||||| |||| || |||||| | ||||| |  ||||||| |||||   ||||||||| |||||||| |||||||    
T  5356154 ttttcgcatggttcttgactaaattcaccataattttcttaaatccatcattttttttaaagtttattataattaaaaaatatgtatttttaattaagaa 5356253  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctct 595  Q
     ||||| |||| |||||| | ||||||| |||||||||||||    
T  5356254 tcatacgaaaaacacctacgaaattgtatctaagttttctct 5356295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 24741876 - 24741827
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24741876 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagtttt 24741827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 17426681 - 17426629
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  17426681 tttagttaagaaccatacgaaaagcacctaatgaattgtacctaagttttctc 17426629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 38629592 - 38629644
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  38629592 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttctc 38629644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 24211331 - 24211279
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  24211331 tttaattaagaaccatacgaaaagcacctaaagaattgtacctaagttttctc 24211279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 14834725 - 14834676
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  14834725 tttagttaagaaccatacgaaaagcacgtaaggaattgtacgtaagtttt 14834676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 29781012 - 29780963
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| ||||    
T  29781012 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaatttt 29780963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 35467288 - 35467337
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  35467288 tttagttaagaaccatacgaaaagcacataaggaattgtacgtaagtttt 35467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 12234585 - 12234637
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||    
T  12234585 tttagttaataaccatacgaaaagcatctaagaaattgtacctaagttttctc 12234637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 598
Target Start/End: Original strand, 37114356 - 37114412
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctttt 598  Q
    ||||||||||||||||||||||| || |||| ||||||||||||| |||||| ||||    
T  37114356 tttagttaagaaccatacaaaaaacatctaaagaattgtacctaaattttctttttt 37114412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 38520136 - 38520188
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| || ||||| |||||||| |||||||||||||||||||||||||    
T  38520136 tttagttaaaaaacatacgaaaagcacttaaggaattgtacctaagttttctc 38520188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 474 - 525
Target Start/End: Original strand, 25264277 - 25264328
Alignment:
Q  474 taaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatat 525  Q
    ||||||||| ||||||||||||||| | ||||||||| ||||||||||||||    
T  25264277 taaattcacaatgatttcctcaaattcataattttcttaaagtttgttatat 25264328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 591
Target Start/End: Complemental strand, 33390755 - 33390652
Alignment:
Q  486 gatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtaccta 585  Q
    ||||||||||||| |  ||||||||||||||| |||||| ||| |||  || |||||||||||||||| ||| |||||| ||  ||| ||| |||||| |    
T  33390755 gatttcctcaaattcacaattttctcaaagttcgttataaccacaaa--atgtatttttagttaagaatcatgcaaaaaacaggtaaagaaatgtaccca 33390658  T
Q  586 agtttt 591  Q
    ||||||    
T  33390657 agtttt 33390652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 573
Target Start/End: Complemental strand, 32996570 - 32996461
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcca-aaaaatatatattttt-agttaagaaccatacaaaa 563  Q
    ||||||||| ||| | |||||||||||| |||||  |||||||||||| | |||| ||| ||| |||||| ||| ||||| |||||| ||||||||| ||    
T  32996570 ttcttaacttaatcccccatgatttcctgaaatctataattttctcaaggattgtaataaccacaaaaatgtatttttttaagttaaaaaccatacagaa 32996471  T
Q  564 agcacctaag 573  Q
    ||||| ||||    
T  32996470 agcacataag 32996461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 582
Target Start/End: Complemental strand, 4262029 - 4261989
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtac 582  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  4262029 tttagttaagaaccatacgaaaagcacctaaagaattgtac 4261989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 594
Target Start/End: Original strand, 8210445 - 8210493
Alignment:
Q  546 gttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| |||||||||| || |||||||||||||| |||||||||||    
T  8210445 gttaagaatcatacaaaaaacatctaaggaattgtacttaagttttctc 8210493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 23940857 - 23940805
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||| |||||||| |||| ||||||||| ||||||||||    
T  23940857 tttagttaagaatcatacgaaaagcacttaagaaattgtaccgaagttttctc 23940805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 538 - 594
Target Start/End: Original strand, 38515618 - 38515674
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| |||| ||||| || ||| ||| ||||||||||||||||||||||||||    
T  38515618 tatttttaattaaaaaccacacgaaatgcatctaaggaattgtacctaagttttctc 38515674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 461 - 564
Target Start/End: Original strand, 7959857 - 7959962
Alignment:
Q  461 tatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttata--tccaaaaaatatatatttttagttaagaaccata 558  Q
    |||| ||||||||||||||  | |||||||||| |||||  || || |||||||||||||||||     ||||||||| ||||||||||||| || ||||    
T  7959857 tatggttcttaactaaatttgctatgatttcctaaaatctatagttgtctcaaagtttgttataataaaaaaaaatatgtatttttagttaaaaatcata 7959956  T
Q  559 caaaaa 564  Q
     |||||    
T  7959957 aaaaaa 7959962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 594
Target Start/End: Original strand, 4036570 - 4036599
Alignment:
Q  565 gcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||||||||    
T  4036570 gcacctaaggaattgtacctaagttttctc 4036599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 455 - 521
Target Start/End: Original strand, 9775229 - 9775297
Alignment:
Q  455 ttttcgtatgattcttaacta--aattcaccatgatttcctcaaatccgtaattttctcaaagtttgtt 521  Q
    ||||||||||||| |||| ||  |||||||||  |||| ||||||| | ||||||||||||||||||||    
T  9775229 ttttcgtatgatttttaattataaattcaccaaaattttctcaaattcataattttctcaaagtttgtt 9775297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 38405257 - 38405305
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||||| ||| |||| ||||||| |||||||||    
T  38405257 tttagttaagaaccatacaaaaaacacataagaaattgta-ctaagtttt 38405305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 45408765 - 45408626
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45408765 ttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 45408666  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  45408665 catacaaaaaacacctaaggaattgtacctaagttttctc 45408626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 452 - 590
Target Start/End: Complemental strand, 2818809 - 2818671
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  2818809 tgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgatatatccaaaaaatatgtatttttagttaag 2818710  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttt 590  Q
    || ||||| ||||||||||||||||||||||||||||||    
T  2818709 aatcatacgaaaagcacctaaggaattgtacctaagttt 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 9281378 - 9281517
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| ||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9281378 ttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 9281477  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  9281478 catacgaaaaggacctaaggaattgtacctaagttttctc 9281517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 24101863 - 24102002
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24101863 ttttcgtatggttcttaactaaatataccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 24101962  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  24101963 catacgaaaagcacctaaggaattgtacttaagttttctc 24102002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 1924011 - 1924151
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaa 553  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  1924011 ttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 1924110  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| |||| |||||||||||||||||||||||||||||    
T  1924111 ccatacgaaaaacacctaaggaattgtacctaagttttctc 1924151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 455 - 596
Target Start/End: Complemental strand, 7737205 - 7737063
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaa 553  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  7737205 ttttcgtatgattcttaactaaatttaccatgatttcctcaaagccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 7737106  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctctt 596  Q
     ||||| ||||||||||||| ||||||||||||||||||||||    
T  7737105 tcataccaaaagcacctaagaaattgtacctaagttttctctt 7737063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 3117016 - 3116877
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3117016 ttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 3116917  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||| || |||||||||||||||||||||    
T  3116916 catacgaaaagcaccaaaagaattgtacctaagttttctc 3116877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 16705873 - 16705734
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| || |||||||||||||| ||||||| |||||| || ||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  16705873 ttttcgtatggtttttaactaaattcactatgattttctcaaagccataattttatcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 16705774  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  16705773 catacgaaaagcacctaaggaattgtacctaagttttctc 16705734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 34456028 - 34455886
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| ||| ||| |||||||| ||| |||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  34456028 tgtttttcgtatggttcctaattaaattcatcataatttcctcaaatctataattttctcaaagtttgttatatccaaaaaatatgtatttttaattaag 34455929  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  34455928 aaccatacgaaaagcacctaaggaattgtacctaagttttctc 34455886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 23836017 - 23835877
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaa 553  Q
    |||||||||| || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  23836017 ttttcgtatggtttttaacaaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 23835918  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  23835917 ccatacgaaaagcacctaaggaattgtacataagttttctc 23835877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 9933600 - 9933739
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  9933600 ttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttattatatctaaaaaatatgtatttttagttaagaac 9933699  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||| |||||||||||| |||||||    
T  9933700 catacgaaaagcacctaagaaattgtacctaaattttctc 9933739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 12850573 - 12850712
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12850573 tttttgtatggtttttaactaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 12850672  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| || |||||||| ||||||||||||||    
T  12850673 catacgaaaagcatctgaggaattggacctaagttttctc 12850712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 27920712 - 27920574
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||||| |    
T  27920712 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttttcaaagtttgttatatccaaaaaatatgtagttttagttaagacc 27920613  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||||||| ||||||| ||||||||||||    
T  27920612 catacgaaaagcacctaagaaattgta-ctaagttttctc 27920574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 34490596 - 34490457
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34490596 ttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 34490497  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||| ||||||| |||||||||||||||||||||    
T  34490496 catacgaaaaacacctaaagaattgtacctaagttttctc 34490457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 452 - 599
Target Start/End: Original strand, 42713805 - 42713953
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaa 550  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||||||||    
T  42713805 tgtttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttattatatccaaaaaaatatgtatttttagttaa 42713904  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctcttttc 599  Q
    ||| ||| | |||||||| |||| |||||||||||||||||||| ||||    
T  42713905 gaatcatgcgaaaagcacttaagaaattgtacctaagttttctcctttc 42713953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 22269862 - 22269723
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||     
T  22269862 ttttcgtatggttcttaactaaaaaaaacatgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaat 22269763  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  22269762 catacgaaaaacacctaaggaattgtacctaagttttctc 22269723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 20893025 - 20892885
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatcca-aaaaatatatatttttagttaagaa 553  Q
    |||||||||||||||||||||||   || || ||||| |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  20893025 ttttcgtatgattcttaactaaaaatacaataatttcatcaaatccataattttctcaaagtttgttatatccataaaaatatgtatttttagttaagaa 20892926  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  20892925 ccatacgaaaagcacctaagaaattgtacctaagttttctc 20892885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 452 - 593
Target Start/End: Complemental strand, 43476089 - 43475946
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa--aaaatatatatttttagtta 549  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||  |||||||||||||||||||     
T  43476089 tgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattatatccaaaaaaaatatatatttttagttt 43475990  T
Q  550 agaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    | |||||||| |||| ||||| ||||||||||| ||||||||||    
T  43475989 aaaaccatacgaaaatcacctgaggaattgtacataagttttct 43475946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 454 - 594
Target Start/End: Original strand, 29229393 - 29229533
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctc-aaagtttgttatatccaaaaaatatatatttttagttaaga 552  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  29229393 tttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaatatgtatttttagttaaga 29229492  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||| ||||| | |||| |||||||| ||||||||||||    
T  29229493 accatacgaaaagtaactaaagaattgta-ctaagttttctc 29229533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 454 - 594
Target Start/End: Original strand, 29342693 - 29342833
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctc-aaagtttgttatatccaaaaaatatatatttttagttaaga 552  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||||||||||||    
T  29342693 tttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttattatatccaaaaaatatgtatttttagttaaga 29342792  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||| ||||| | |||| |||||||| ||||||||||||    
T  29342793 accatacgaaaagtaactaaagaattgta-ctaagttttctc 29342833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 6605874 - 6605739
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| |||||| ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||||      
T  6605874 tttttgtatggttctta-ctaaatttaccatgatttcctcaaatgcataattttctcaaagtttgttatatccaaataatatgtatttttagttaaga-- 6605778  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
     |||| |||||||| |||||||||||||||||||||||||    
T  6605777 -atacgaaaagcacataaggaattgtacctaagttttctc 6605739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 9850789 - 9850923
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||| |||||||||| || |||||| ||||||||||||| |||||||||| |||||||||| |||||||||||||||||    
T  9850789 ttttcgtatggttcttaactaaatttaccatgattttcttaaatccataattttctcaaaatttgttatat-caaaaaatatgtatttttagttaagaac 9850887  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||| |||    ||||||||||||||||||||||    
T  9850888 catacgaaaaacac----ggaattgtacctaagttttctc 9850923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 451 - 591
Target Start/End: Complemental strand, 7116514 - 7116374
Alignment:
Q  451 atgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaa 550  Q
    |||||||||||||| ||||||| |||||| ||||| ||||| |||||||| |||||||||||||| ||||| ||||||| |||  | ||||||||||| |    
T  7116514 atgtttttcgtatggttcttaaataaatttaccataatttcatcaaatccataattttctcaaagattgttctatccaacaaaggtgtatttttagttga 7116415  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||| ||||| | |||| ||||||||||||||||||    
T  7116414 gaaccatacgaaaagtatctaaagaattgtacctaagtttt 7116374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 454 - 591
Target Start/End: Original strand, 39243013 - 39243150
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 553  Q
    |||||||||||||||||||||||||| | | ||||||| ||||||   | ||||| |||||||||||||||||||| | |  | |||||||||| |||||    
T  39243013 tttttcgtatgattcttaactaaatttatcgtgatttcatcaaatttatgattttatcaaagtttgttatatccaacataggtgtatttttagtcaagaa 39243112  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||  |||||| |||||||| |||| ||||    
T  39243113 ccatacaaaaaatacctaaagaattgtatctaaatttt 39243150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 451 - 545
Target Start/End: Complemental strand, 40362626 - 40362533
Alignment:
Q  451 atgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatattttta 545  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||||||| ||||| || | ||||||||    
T  40362626 atgtttttcgtatggttcttaactaaattcaccatgattttctcaaat-cataattttctcatagtttgttatattcaaaacatgtgtattttta 40362533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 538 - 594
Target Start/End: Original strand, 34490570 - 34490626
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34490570 tatttttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 34490626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 502 - 583
Target Start/End: Original strand, 17434758 - 17434840
Alignment:
Q  502 taattttctcaaagtttgttatatcc-aaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacc 583  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||||| |||| || |||||||||||||||    
T  17434758 taattttctcaaagtttgttatatccaaaaaaatatatttatttagttaagaatcatacgaaaaacatctaaggaattgtacc 17434840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 24101885 - 24101833
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  24101885 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 24101833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 1924033 - 1923981
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  1924033 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttctc 1923981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 7737183 - 7737235
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  7737183 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttctc 7737235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 45408743 - 45408795
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45408743 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 45408795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 548 - 594
Target Start/End: Original strand, 6605858 - 6605904
Alignment:
Q  548 taagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  6605858 taagaaccatacaaaaagcacctaaagaattgtacctaagttttctc 6605904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 540 - 594
Target Start/End: Original strand, 22269838 - 22269892
Alignment:
Q  540 tttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  22269838 tttttagttaagaaccatacgaaaagcatctaaggaattgtacgtaagttttctc 22269892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 2818784 - 2818836
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  2818784 tttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttctc 2818836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 3116994 - 3117046
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  3116994 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctc 3117046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 10552999 - 10553051
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||||||||||    
T  10552999 tttagttaagaatcatacgaaaaacacctaaggaattgtacctaagttttctc 10553051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 16705851 - 16705903
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| |||||||    
T  16705851 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaaattttctc 16705903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 452 - 540
Target Start/End: Original strand, 17500034 - 17500122
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatat 540  Q
    ||||||||||||| |||||||||||||||||  | || | ||||||||| | ||||| ||||||||||||||||  |||| ||||||||    
T  17500034 tgtttttcgtatggttcttaactaaattcacggtaatcttctcaaatcctttattttttcaaagtttgttatatttaaaatatatatat 17500122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 43858552 - 43858604
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  43858552 tttagttaagaaccatacgaaaagtacctaaggaattgtacctaaattttctc 43858604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 543 - 594
Target Start/End: Original strand, 8111692 - 8111743
Alignment:
Q  543 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  8111692 ttagttaagaaccatacaaaaaggacctaagaaattgtaactaagttttctc 8111743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 452 - 490
Target Start/End: Complemental strand, 10553024 - 10552986
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgattt 490  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10553024 tgtttttcgtatgattcttaactaaattcaccatgattt 10552986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 591
Target Start/End: Original strand, 22346432 - 22346542
Alignment:
Q  482 ccatgatttcctcaaatccgtaattttctcaaagttt-gttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgt 580  Q
    ||||||| || |||||| | ||||||||| ||||||| |||| | |||||||| || ||||||||||||| |||||||| |||||||| || |||| ||     
T  22346432 ccatgatatcatcaaattcataattttctgaaagttttgttaaaaccaaaaaagatgtatttttagttaaaaaccatacgaaaagcacatacggaaatgc 22346531  T
Q  581 acctaagtttt 591  Q
    |||||| ||||    
T  22346532 acctaaatttt 22346542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 12850595 - 12850546
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  12850595 tttagttaaaaaccatacaaaaagtacctaaggaattgtacctaaatttt 12850546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 9281400 - 9281348
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  ||||| ||||||||||||||||| ||||||||||    
T  9281400 tttagttaagaaccatatgaaaagtacctaaggaattgtaccaaagttttctc 9281348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 594
Target Start/End: Original strand, 20892999 - 20893054
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||| ||||| |||||||||||||||||| || ||||||||||||    
T  20892999 tatttttagttaagaatcatacgaaaagcacctaaggaattata-ctaagttttctc 20893054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 27920690 - 27920742
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||| ||||  ||||||||||||||||||||    
T  27920690 tttagttaagaaccatacgaaaagcagctaaaaaattgtacctaagttttctc 27920742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 43476064 - 43476116
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||| ||||||||||||| ||||||| |||||||    
T  43476064 tttagttaagaaccatacgaaaaacacctaaggaattatacctaaattttctc 43476116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 536 - 591
Target Start/End: Complemental strand, 37341025 - 37340970
Alignment:
Q  536 tatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||||||||||||||  || |||  |||||||||||||||||    
T  37341025 tatatttttagttaagaaccatacaaaaaatacttaaaaaattgtacctaagtttt 37340970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 9933622 - 9933571
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  |||||||| ||| |||||||||||||||||||||    
T  9933622 tttagttaagaaccataggaaaagcac-taatgaattgtacctaagttttctc 9933571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 42713830 - 42713778
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||| ||||||||||||| || |||| |||||||    
T  42713830 tttagttaagaaccatacgaaaaacacctaaggaattatatctaaattttctc 42713778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 452 - 525
Target Start/End: Complemental strand, 25095875 - 25095801
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcacca-tgatttcctcaaatccgtaattttctcaaagtttgttatat 525  Q
    |||||||| ||| ||||||||||||||| |  | ||||||| |||||| | ||||||| ||||||||||||||||    
T  25095875 tgtttttcatataattcttaactaaatttaaaaatgatttcttcaaattcttaattttttcaaagtttgttatat 25095801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 594
Target Start/End: Complemental strand, 29229414 - 29229362
Alignment:
Q  544 tagttaagaaccatac--aaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||| |||||  ||||||||| |||| ||||||||||||||||||||    
T  29229414 tagttaagaatcatacgaaaaaagcacataagtaattgtacctaagttttctc 29229362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 594
Target Start/End: Complemental strand, 29342714 - 29342662
Alignment:
Q  544 tagttaagaaccatac--aaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||| |||||  ||||||||| |||| ||||||||||||||||||||    
T  29342714 tagttaagaatcatacgaaaaaagcacataagtaattgtacctaagttttctc 29342662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 108; Significance: 8e-54; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 7226 - 7087
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  7226 ttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttatatccaaaatatatatatttttagttaagaat 7127  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||| ||||||||||||||||||||| |||||||    
T  7126 catacgaaaaacacctaaggaattgtacctaaattttctc 7087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 7204 - 7256
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  7204 tttagttaagaaccatacgaaaagcacctaaggaatcgtacctaaattttctc 7256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 108; Significance: 8e-54; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 51203 - 51064
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||| |||| ||||||||||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51203 ttttcatatggttcttaactaaattcactatgatttccttaaattcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 51104  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  51103 catacgaaaaggacctaaggaattgtacctaagttttctc 51064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 51181 - 51233
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  51181 tttagttaagaaccatatgaaaagtacctaaggaattgtacctaagttttctc 51233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 2e-51; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 1138699 - 1138560
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1138699 ttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 1138600  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||||| || |||||||||||||||||||||    
T  1138599 catacgaaaagcaccaaaagaattgtacctaagttttctc 1138560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 4266125 - 4265983
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||    
T  4266125 tgtttttcgtatggttcttaactaaattcaccgtgatttcttcaaatccataattttcttaaagtttgttacatccaaaaaatatgtatttttagttaag 4266026  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| |||| |||||||| ||||||||||||||||||||    
T  4266025 aaccatacgaaaaacacctaagaaattgtacctaagttttctc 4265983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 460 - 593
Target Start/End: Original strand, 24397282 - 24397415
Alignment:
Q  460 gtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccata 558  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  24397282 gtatggttcttaactaaattcac-atgatttcctcaaatccataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaaccata 24397380  T
Q  559 caaaaagcacctaaggaattgtacctaagttttct 593  Q
    | |||||||||||||||||||||||||||||||||    
T  24397381 cgaaaagcacctaaggaattgtacctaagttttct 24397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 15855983 - 15855844
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  15855983 ttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaac 15855884  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  15855883 catacgaaaagcatctaaggaattgtacctaagttttctc 15855844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 35420643 - 35420782
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  35420643 ttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaac 35420742  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  35420743 catacgaaaagcatctaaggaattgtacctaagttttctc 35420782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 13754319 - 13754461
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  13754319 tgtttttcgtatgattcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgctatatcaaaaaaatatgtatttttagttaag 13754418  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| |||| |||||||| |||||||| ||| |||||||    
T  13754419 aaccatacgaaaaacacctaagtaattgtacataaattttctc 13754461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 455 - 591
Target Start/End: Complemental strand, 16473095 - 16472959
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||||||||   | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  16473095 ttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaac 16472996  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  16472995 catacgaaaagcatctaaggaattgtacctaagtttt 16472959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 20476571 - 20476432
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||  |||||||| |||||||||||||||||    
T  20476571 ttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaaatttgttatatcacaaaaatatgtatttttagttaagaac 20476472  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||||| |||  |||||||||||||||||||||    
T  20476471 catacgaaaagcatctagagaattgtacctaagttttctc 20476432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 21259761 - 21259900
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||| ||||||  ||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21259761 ttttcgtatggttcttagttaaattcaccatgatttcctcaaaatcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 21259860  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||  ||||| |||||||||||||||||||| |||||||    
T  21259861 cataagaaaagtacctaaggaattgtacctaaattttctc 21259900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 452 - 572
Target Start/End: Complemental strand, 12744969 - 12744849
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||     
T  12744969 tgtttttcgtatgatttttgactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaa 12744870  T
Q  552 aaccatacaaaaagcacctaa 572  Q
    ||||||||||||| |||||||    
T  12744869 aaccatacaaaaaacacctaa 12744849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 12808054 - 12807913
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||     
T  12808054 tgtttttcgtatgattcttgactaaattcaccatgatttccttaaatccataattttttcaaagtttgttatatctaaaaaatatgtatttttagttaaa 12807955  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| |||| |||||||| |||||||  |||||||||||    
T  12807954 aaccatacgaaaaacacctaagaaattgta-ttaagttttctc 12807913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 33629376 - 33629517
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaa--atatatatttttagttaaga 552  Q
    |||| ||||| ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  33629376 ttttggtatggttcttaactaaattcactatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatatatatttttagttaaga 33629475  T
Q  553 accatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    | ||||| |||| || |||||||||||||||||| |||||||    
T  33629476 atcatacgaaaaacatctaaggaattgtacctaaattttctc 33629517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 466 - 591
Target Start/End: Original strand, 8364672 - 8364797
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaag 565  Q
    ||||||||||||||||||||||||| || ||||   ||||| |||||||||||||||| || ||||||  ||||||||||||||||||||||||||||||    
T  8364672 ttcttaactaaattcaccatgattttcttaaatttataattctctcaaagtttgttatgtctaaaaaaattatatttttagttaagaaccatacaaaaag 8364771  T
Q  566 cacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||||||||    
T  8364772 cacctaaggaattgtacctaagtttt 8364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 455 - 568
Target Start/End: Complemental strand, 21262083 - 21261970
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21262083 tttttgtatggttcttaactaaattcatcatgatttcctcaaatccacaattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 21261984  T
Q  555 catacaaaaagcac 568  Q
    ||||| ||||||||    
T  21261983 catacgaaaagcac 21261970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 452 - 594
Target Start/End: Complemental strand, 43539250 - 43539109
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    ||||||||||||| | |||||||||||||| | |||||| || |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| ||    
T  43539250 tgtttttcgtatggtccttaactaaattcatcgtgattttcttaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttatagttcag 43539151  T
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| ||||  ||||||| ||||||| ||||||||||||    
T  43539150 aaccatacgaaaaatacctaagaaattgta-ctaagttttctc 43539109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 466 - 594
Target Start/End: Original strand, 37552350 - 37552472
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaag 565  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||||||||    
T  37552350 ttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttataacaaaaaaatatgtatttttagtcaagaaccatacaaaaag 37552449  T
Q  566 cacctaaggaattgtacctaagttttctc 594  Q
    ||      |||||||||||||||||||||    
T  37552450 ca------gaattgtacctaagttttctc 37552472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 466 - 594
Target Start/End: Original strand, 37655194 - 37655315
Alignment:
Q  466 ttcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaag 565  Q
    |||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  37655194 ttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttata-acaaaaaatatgtatttttagttaagaaccatacaaaaag 37655292  T
Q  566 cacctaaggaattgtacctaagttttctc 594  Q
    ||      |||||||||||||||||||||    
T  37655293 ca------gaattgtacctaagttttctc 37655315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 455 - 591
Target Start/End: Complemental strand, 35807075 - 35806939
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| |||| | |||||||||||||||||| ||||||||  ||||||| | |||||||||||||| ||||||| || |||||||||||||||||    
T  35807075 tttttgtatggttctaacctaaattcaccatgattttctcaaatctttaatttttttaaagtttgttatattcaaaaaagatgtatttttagttaagaac 35806976  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||  |||||||||||| ||||||||| ||| ||||    
T  35806975 catatgaaaagcacctaaagaattgtacttaaatttt 35806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 455 - 591
Target Start/End: Original strand, 780825 - 780959
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||||||||| |||| | |||||||||||||||||||| |||||| ||||||||| ||||||||||||||  |||||| | | |   ||| ||||||||    
T  780825 ttttcgtatgactcttgattaaattcaccatgatttccttaaatccataattttcttaaagtttgttatat--aaaaaaaaaaaaaaattaattaagaac 780922  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  780923 catacgaaaagcacctaagaaattgtacctaagtttt 780959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 450 - 591
Target Start/End: Complemental strand, 18236613 - 18236470
Alignment:
Q  450 catgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaata--tatatttttagt 547  Q
    ||||||||||||||| |||||||||||||||  | |||||| || |||| | ||||||| |||||||||||||||||||||||| |  | |||||||||     
T  18236613 catgtttttcgtatggttcttaactaaattcgtcgtgattttcttaaatacataattttttcaaagtttgttatatccaaaaaaaaattgtatttttagc 18236514  T
Q  548 taagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||| ||||  ||||||| ||||| |||||||||||||||||    
T  18236513 taagaatcataggaaaagcagctaagaaattgtacctaagtttt 18236470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 461 - 559
Target Start/End: Original strand, 1456059 - 1456157
Alignment:
Q  461 tatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatac 559  Q
    |||| ||| |||||||||||||  | |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  1456059 tatggttcataactaaattcactgtaattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttagtcaagaaccatac 1456157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 474 - 594
Target Start/End: Original strand, 1164845 - 1164966
Alignment:
Q  474 taaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacaaaaagcacctaa 572  Q
    |||||| ||||||||||  | |||||| ||||||| | ||||||| |||||||||||||| ||| |||||||| ||||||||||||| ||||||| ||||    
T  1164845 taaatttaccatgatttttttaaatccataattttttaaaagtttattatatccaaaaaaatatttatttttaattaagaaccatacgaaaagcagctaa 1164944  T
Q  573 ggaattgtacctaagttttctc 594  Q
    |||||||||||||| |||||||    
T  1164945 ggaattgtacctaaattttctc 1164966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 474 - 594
Target Start/End: Complemental strand, 19976383 - 19976262
Alignment:
Q  474 taaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa-aaaatatatatttttagttaagaaccatacaaaaagcacctaa 572  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||  |||||||||||||||||||||| |||| ||| |||    
T  19976383 taaatttaccatgatttcctcaaatccataattttctcaaagtttatcatatccaaaaaaatacgtatttttagttaagaaccatacgaaaatcacataa 19976284  T
Q  573 ggaattgtacctaagttttctc 594  Q
      |||| ||  |||||||||||    
T  19976283 aaaattatagttaagttttctc 19976262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 538
Target Start/End: Original strand, 32623243 - 32623329
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatat 538  Q
    ||||||||||||| ||||||||||||||||| ||||||||   |||||| ||||||||||||||||||||||||| ||||| |||||    
T  32623243 tgtttttcgtatggttcttaactaaattcactatgatttctgtaaatccataattttctcaaagtttgttatatctaaaaattatat 32623329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 591
Target Start/End: Original strand, 35276338 - 35276460
Alignment:
Q  470 taactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaa-tatatatttttagttaagaaccatacaaaaagcac 568  Q
    |||||||||| ||||||||||  |||||||| ||||||||| ||||||| ||||||| |||||| | | ||||||||| ||||||| ||||||||||||     
T  35276338 taactaaatttaccatgattttatcaaatccataattttcttaaagtttattatatctaaaaaaatgtgtatttttaggtaagaactatacaaaaagcat 35276437  T
Q  569 ctaaggaattgtacctaagtttt 591  Q
    ||||  ||||||| |||||||||    
T  35276438 ctaataaattgtatctaagtttt 35276460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 589
Target Start/End: Complemental strand, 2538530 - 2538402
Alignment:
Q  461 tatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccataca 560  Q
    |||||||||||||| || |  | |||||||  |||||||| ||||||||||| ||||||||||| ||| ||||| | |||||| |||| ||||| |||||    
T  2538530 tatgattcttaacttaactacctatgattttttcaaatccataattttctcagagtttgttataaccagaaaatgtgtattttaagttgagaacgataca 2538431  T
Q  561 aaaagcacctaaggaattgtacctaagtt 589  Q
    |||||||| ||||||| || |||||||||    
T  2538430 aaaagcacataaggaaatgcacctaagtt 2538402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 15855956 - 15856013
Alignment:
Q  537 atatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  15855956 atatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctc 15856013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 16473068 - 16473125
Alignment:
Q  537 atatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  16473068 atatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctc 16473125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 594
Target Start/End: Complemental strand, 35420670 - 35420613
Alignment:
Q  537 atatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  35420670 atatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctc 35420613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 20476549 - 20476601
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20476549 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttctc 20476601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 504 - 591
Target Start/End: Original strand, 42522900 - 42522987
Alignment:
Q  504 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||||| ||| || || ||||||||||||||||||| ||||||| |||||||  |||| || |||||||||    
T  42522900 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaaccaaacaaaaaacacctaaaaaattatatctaagtttt 42522987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 452 - 564
Target Start/End: Complemental strand, 5144570 - 5144459
Alignment:
Q  452 tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaag 551  Q
    |||||||| ||||||| ||||||||||||| ||||||||| | |||| | |||||||||| ||| || ||||||||| ||||| | |||||||||||||     
T  5144570 tgtttttcctatgatttttaactaaattcatcatgatttctttaaattcataattttctctaaggttattatatcca-aaaatgtgtatttttagttaaa 5144472  T
Q  552 aaccatacaaaaa 564  Q
    || | ||||||||    
T  5144471 aaacgtacaaaaa 5144459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 33629398 - 33629346
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  33629398 tttagttaagaaccataccaaaagcacataaggaattgtacctaagttttctc 33629346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 564
Target Start/End: Complemental strand, 12191482 - 12191423
Alignment:
Q  505 ttttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaa 564  Q
    |||||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  12191482 ttttcttaaagtttgttatatccaaaaaatatgtaattttatttaagaaccatacaaaaa 12191423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 486 - 564
Target Start/End: Complemental strand, 735385 - 735307
Alignment:
Q  486 gatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaa 564  Q
    |||||| |||||| | |||||||||||||||||||||||| ||| |||||| |||||||| ||||||| |||| |||||    
T  735385 gatttcatcaaattcataattttctcaaagtttgttatattcaagaaatatgtatttttaattaagaatcataaaaaaa 735307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 593
Target Start/End: Original strand, 2255578 - 2255631
Alignment:
Q  540 tttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    ||||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  2255578 tttttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttct 2255631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 591
Target Start/End: Complemental strand, 32623268 - 32623219
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  32623268 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagtttt 32623219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 1138677 - 1138729
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  1138677 tttagttaagaaccatacgaaaagcagctatggaattgtacctaagttttctc 1138729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 2268723 - 2268775
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||||||||||    
T  2268723 tttagttaagaaccatacaaaaagcatctaagaaattatacctaagttttctc 2268775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 4266100 - 4266152
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||||||||    
T  4266100 tttagttaagaaccatacgaaaaacacctaaggaattgtaccgaagttttctc 4266152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 511
Target Start/End: Original strand, 21591244 - 21591300
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctc 511  Q
    |||||||||| || | |||||||||||||||||||||||||||||| ||||||||||    
T  21591244 ttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21591300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 455 - 511
Target Start/End: Original strand, 21595361 - 21595417
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctc 511  Q
    |||||||||| || | |||||||||||||||||||||||||||||| ||||||||||    
T  21595361 ttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21595417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 520 - 591
Target Start/End: Complemental strand, 10132357 - 10132286
Alignment:
Q  520 ttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| ||  |||  ||||||| |||||||||    
T  10132357 ttatatccaaaaaagatatatttttaattaagaaccatacaaaaaacatataaaaaattgtatctaagtttt 10132286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 580
Target Start/End: Complemental strand, 20464053 - 20464014
Alignment:
Q  541 ttttagttaagaaccatacaaaaagcacctaaggaattgt 580  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20464053 ttttagttaagaaccatacaaaaagcacctaaggaattgt 20464014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 596
Target Start/End: Original strand, 4913267 - 4913321
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctt 596  Q
    ||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||    
T  4913267 tttagttaagaaccatacaaaaaacacctaagaaattgtacgtaagttttttctt 4913321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 541 - 594
Target Start/End: Complemental strand, 2268226 - 2268173
Alignment:
Q  541 ttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||| |||||||    
T  2268226 ttttaattaagaaccatacaaaaaacacttaaggaattgtacctaatttttctc 2268173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 542 - 591
Target Start/End: Original strand, 10132372 - 10132421
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||||||||||||||| ||| |||||||||||| |||||||||    
T  10132372 tttagttaagaaccatacaaaaaacacataaggaattgtatctaagtttt 10132421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 13754344 - 13754292
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| ||||| |||| ||| |||||||||||||||||||||||||    
T  13754344 tttagttaagaatcatacgaaaaacacataaggaattgtacctaagttttctc 13754292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 21591266 - 21591214
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||| | |||||||| |||||||| |||||||||||||||||||||||||    
T  21591266 tttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctc 21591214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 21595383 - 21595331
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||| | |||||||| |||||||| |||||||||||||||||||||||||    
T  21595383 tttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctc 21595331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 37552361 - 37552309
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||| ||||||||||||  || |||||||||||||||||||||    
T  37552361 tttagttaagaaccgtacaaaaagcacggaatgaattgtacctaagttttctc 37552309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 43539225 - 43539277
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||| |||||||    
T  43539225 tttagttaaggaccatacgaaaaacacctaaggaattgtacctaaattttctc 43539277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 455 - 510
Target Start/End: Complemental strand, 2529121 - 2529066
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttct 510  Q
    ||||||| || |||||||||||||||||| ||||||||| |||||| |||||||||    
T  2529121 ttttcgtgtggttcttaactaaattcaccgtgatttccttaaatccataattttct 2529066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 454 - 573
Target Start/End: Complemental strand, 10500218 - 10500099
Alignment:
Q  454 tttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaa 553  Q
    |||||||||||||||||||||||||   || |||||||||||||| | |||| ||||| | || | ||| | |||| |||  | | ||||||||||||||    
T  10500218 tttttcgtatgattcttaactaaataatccttgatttcctcaaatacataatgttctccaggtatattacaaccaataaaagtttgtttttagttaagaa 10500119  T
Q  554 ccatacaaaaagcacctaag 573  Q
    |||||  |||| ||||||||    
T  10500118 ccatatgaaaaacacctaag 10500099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 594
Target Start/End: Original strand, 17583367 - 17583409
Alignment:
Q  552 aaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  17583367 aaccatacgaaaagcacctaagaaattgtacctaagttttctc 17583409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 592
Target Start/End: Original strand, 25751570 - 25751619
Alignment:
Q  543 ttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttc 592  Q
    |||||||||||||| || ||||||||||||  ||||||||||||||||||    
T  25751570 ttagttaagaaccacacgaaaagcacctaaaaaattgtacctaagttttc 25751619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 591
Target Start/End: Original strand, 10304715 - 10304823
Alignment:
Q  483 catgatttcctcaaatccgtaattttctcaaagtttgttat-atc-caaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgt 580  Q
    ||||||||| | |||||| |||||||||||  ||||||||| ||  ||||||| | | || ||||||||| || |||||||||| || |||||||||||     
T  10304715 catgatttcattaaatccataattttctca--gtttgttattataacaaaaaaaaaaaatatttagttaaaaatcatacaaaaaacatctaaggaattgc 10304812  T
Q  581 acctaagtttt 591  Q
    |||||||||||    
T  10304813 acctaagtttt 10304823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 581
Target Start/End: Original strand, 21262061 - 21262100
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgta 581  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  21262061 tttagttaagaaccatacaaaaagctgctaaggaattgta 21262100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 547 - 594
Target Start/End: Complemental strand, 29141853 - 29141806
Alignment:
Q  547 ttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||| |||| |||||||| ||||||| ||||||||||||    
T  29141853 ttaagaaccatacgaaaaacacctaagcaattgtatctaagttttctc 29141806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 542 - 592
Target Start/End: Original strand, 12744944 - 12744994
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttc 592  Q
    |||||| || || ||||| |||| |||||||||||||||||||||||||||    
T  12744944 tttagtcaaaaatcatacgaaaaacacctaaggaattgtacctaagttttc 12744994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 542 - 592
Target Start/End: Original strand, 12808029 - 12808079
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttc 592  Q
    |||||| ||||| ||||| |||| ||| |||||||||||||||||||||||    
T  12808029 tttagtcaagaatcatacgaaaaacacttaaggaattgtacctaagttttc 12808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 594
Target Start/End: Complemental strand, 21259777 - 21259731
Alignment:
Q  548 taagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||| |||||||| ||| ||||||||| |||||||||||    
T  21259777 taagaaccatacgaaaagcacataaagaattgtacgtaagttttctc 21259731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 545
Target Start/End: Complemental strand, 2268713 - 2268672
Alignment:
Q  504 attttctcaaagtttgttatatccaaaaaatatatattttta 545  Q
    |||| ||||||||||||||||| |||||||||| ||||||||    
T  2268713 atttcctcaaagtttgttatattcaaaaaatatgtattttta 2268672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 583
Target Start/End: Original strand, 2529099 - 2529140
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacc 583  Q
    ||||||||||||||| || ||||||||||||| |||||||||    
T  2529099 tttagttaagaaccacacgaaaagcacctaagaaattgtacc 2529140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 594
Target Start/End: Complemental strand, 37655184 - 37655139
Alignment:
Q  549 aagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||| ||||||||||||  || |||||||||||||||||||||    
T  37655184 aagaaccgtacaaaaagcacggaatgaattgtacctaagttttctc 37655139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 101; Significance: 1e-49; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 1970 - 2110
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatc-caaaaaatatatatttttagttaagaa 553  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||  ||||||||  ||||||||||||||||    
T  1970 tttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttatatctaaaaaaatacgtatttttagttaagaa 2069  T
Q  554 ccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  2070 ccatataaaaagcacctaaggaattgtacctaagttttctc 2110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 1992 - 1940
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||||||||||||||||||||||||||||||  |||| ||||||| |||||||    
T  1992 tttagttaagaaccatacaaaaagcacctaaacaattatacctaaattttctc 1940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 455 - 593
Target Start/End: Complemental strand, 10255 - 10118
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    ||||||||| |||||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10255 ttttcgtataattcttaagtaaattcaccatgattttctcacatccataattttctcaaagtttgttatatcca-aaaatatatatttttagttaagaac 10157  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttct 593  Q
    |||||  ||| ||||||||||||| ||||||||||||||    
T  10156 catacgcaaaacacctaaggaattatacctaagttttct 10118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 455 - 591
Target Start/End: Complemental strand, 48266 - 48130
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||| |||    
T  48266 ttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatccaaaaaatatgtatttttaattaaaaac 48167  T
Q  555 catacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||| ||||||||||||  |||| ||| ||||||||    
T  48166 catacgaaaagcacctaaaaaattatacgtaagtttt 48130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 596
Target Start/End: Original strand, 48244 - 48298
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctt 596  Q
    ||||||||||||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  48244 tttagttaagaactatacgaaaagcatctaaggaattgtatctaagttttctctt 48298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 88; Significance: 7e-42; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 455 - 594
Target Start/End: Original strand, 3424 - 3563
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||    
T  3424 tttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaac 3523  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| ||||| |||||| ||||||||||||| |||||||    
T  3524 catacgaaaagtacctaaagaattgtacctaaattttctc 3563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 3446 - 3394
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  3446 tttaattaagaaccatacaaaaagcaccaaatgaattgtacctaagttttctc 3394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 80; Significance: 4e-37; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 14582 - 14443
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaac 554  Q
    |||||||||  |||||||||||||||||||| | ||| ||| |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||| ||    
T  14582 ttttcgtatcgttcttaactaaattcaccattacttcgtcatatccataattttctcaaagtctgttatatccaaataatatgtatttttagttaagtac 14483  T
Q  555 catacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||  |||| |||||||| ||||||||||||||||||||    
T  14482 cataggaaaaacacctaagaaattgtacctaagttttctc 14443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 542 - 596
Target Start/End: Original strand, 14560 - 14614
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctctt 596  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||    
T  14560 tttagttaagaacgatacgaaaagcacccaaggaattgtacctaagttttctctt 14614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 78; Significance: 6e-36; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 455 - 594
Target Start/End: Complemental strand, 5845 - 5702
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgta---attttctc-aaagtttgttatatccaaaaaatatatatttttagttaa 550  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||   ||  | |  ||| ||||||||||||||||||||| |||||||||||||    
T  5845 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccatatccataatttagaaaatttgttatatccaaaaaatatgtatttttagttaa 5746  T
Q  551 gaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||    
T  5745 gaaccatacgaaaagcacctaaagaattgtaccttagttttctc 5702  T

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Target: scaffold0595; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 5823 - 5877
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaagg--aattgtacctaagttttctc 594  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  5823 tttagttaagaaccatacgaaaagcacctaaggaaaattgtacctaagttttctc 5877  T

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Target: scaffold0006 (Bit Score: 61; Significance: 9e-26; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 502 - 594
Target Start/End: Original strand, 72349 - 72440
Alignment:
Q  502 taattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||| | ||||||||||||    
T  72349 taattttctcagagtttgttatatccaaaaaatatgtatttttagttaaaaaccatacgaaaagcacttaaggaattgca-ctaagttttctc 72440  T

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Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 72341 - 72289
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  72341 tttagctaagaatcatacaaaaagcatctaaggaattgtacctaagttctctc 72289  T

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Target: scaffold0069 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 26462 - 26406
Alignment:
Q  538 tatttttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttctc 594  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  26462 tatttttagttaataaccatacgaaaagcacctaaggaattgtacctaagttttctc 26406  T

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Target: scaffold0013 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 558
Target Start/End: Complemental strand, 94306 - 94207
Alignment:
Q  461 tatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaa--aaaatatatatttttagttaagaaccata 558  Q
    |||| |||||||||||||||||||||||||  ||||||||  |||||||||| ||||||||||||||||  ||||  | ||||||||||||| |||||||    
T  94306 tatggttcttaactaaattcaccatgattttatcaaatccaaaattttctcatagtttgttatatccaatgaaaaggtgtatttttagttaaaaaccata 94207  T

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Target: scaffold0018 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 455 - 542
Target Start/End: Original strand, 138308 - 138395
Alignment:
Q  455 ttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttatatccaaaaaatatatattt 542  Q
    ||||||||||||||||||||||||||| |||||||| || |||||| || |||| | ||||||| |||||||||||||| || |||||    
T  138308 ttttcgtatgattcttaactaaattcatcatgattttcttaaatccatattttttttaaagtttattatatccaaaaaagatgtattt 138395  T

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Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 585
Target Start/End: Complemental strand, 138330 - 138287
Alignment:
Q  542 tttagttaagaaccatacaaaaagcacctaaggaattgtaccta 585  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||    
T  138330 tttagttaagaatcatacgaaaagctcctaaggaattgtaccta 138287  T

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Target: scaffold0391 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 502 - 591
Target Start/End: Original strand, 3663 - 3753
Alignment:
Q  502 taattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacca-tacaaaaagcacctaaggaattgtacctaagtttt 591  Q
    ||||||||||| ||||||||||||  |||||||| ||||||||| |||| || || ||  |||| ||||||| ||||| || |||||||||    
T  3663 taattttctcatagtttgttatataaaaaaaataaatatttttaattaaaaatcattatgaaaaacacctaaagaattatatctaagtttt 3753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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