View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20321_low_26 (Length: 430)
Name: NF20321_low_26
Description: NF20321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20321_low_26 |
 | |
|
| [»] scaffold0015 (1 HSPs) |
| | |
|
| [»] scaffold0070 (1 HSPs) |
| | |
|
| [»] scaffold0700 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 374; Significance: 0; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 3 - 416
Target Start/End: Complemental strand, 38740205 - 38739792
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38740205 |
tccataaatttctaaaattacataatctcacataaacggtcaaaattacccaaattcatcgttaaattacataaacacgaattcattaaaattcaacaat |
38740106 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
38740105 |
acggacacaaattcggaaaacattacactattacacgttaataaatattagacttcaacggatcggacataaagatgtaaaagattattttcaaccatca |
38740006 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
38740005 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaacggtcctcttccttatcctcccccaagtccacgcc |
38739906 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
38739905 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttgtcagtgggg |
38739806 |
T |
|
| Q |
403 |
tttatagtgaacca |
416 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
38739805 |
tttatagtgaacca |
38739792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 3 - 416
Target Start/End: Original strand, 35049202 - 35049615
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
35049202 |
tccataaatttctaaaattacataatctcacataaacggtcaaaattacccaaattcatcgttaaattacatcaacacaaattcattaaaattcaacaat |
35049301 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
35049302 |
acggacacaaattcggaaaacattacactattacacattaataaatattacacttcaacggatcggacataaagatgtaaaagattattttcaaccatca |
35049401 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||| |
|
|
| T |
35049402 |
cgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacgcggtcttccaacggtcctcttccttatcctcccacaagtccacgcc |
35049501 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
35049502 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgtcttcaactcgtccaacttgtcggtgggg |
35049601 |
T |
|
| Q |
403 |
tttatagtgaacca |
416 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
35049602 |
tttatagtgaacca |
35049615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 3 - 416
Target Start/End: Original strand, 20883397 - 20883810
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||| |||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
20883397 |
tccataaatttctaaaaatacataatctcacatgaacggtcaaaattacccaaattcatcgttaaattacatcaacacaaattcattaaaattcaacaat |
20883496 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|| ||||||||||| ||||||||||| ||||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
20883497 |
acagacacaaattcggaaaacattacgctattacacgttaataaatattaaatttcaacggattggacataaagatgtaaaaggttattttcaaccatct |
20883596 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
20883597 |
cgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaacggtcctcttccttatcctcccccaagtccacgcc |
20883696 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
|| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
20883697 |
tgaaacttgtactactacataatatgttatgtgatttgaaccaatactgataaagaagtcgtcaagttttgccttcaactcgtccaacttgtcggtgggg |
20883796 |
T |
|
| Q |
403 |
tttatagtgaacca |
416 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
20883797 |
tttatagtgaacca |
20883810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 406
Target Start/End: Complemental strand, 17344553 - 17344165
Alignment:
| Q |
17 |
aaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacacaaattc |
116 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17344553 |
aaattacataatctcacataaatggtcaaaattacacaaattcatcgttaaattatataaccacaaattcattaaaattcaacaatacagacacaaattc |
17344454 |
T |
|
| Q |
117 |
agaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaa |
216 |
Q |
| |
|
||| | ||||| |||||||| ||||||||||||| ||||||| ||||| ||| ||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
17344453 |
-gaacaaattacgatattacacgttaataaatattacacttcaatggatcagacgtaaagattcaaagtgttattttcaaccatcacacgaaacatgtaa |
17344355 |
T |
|
| Q |
217 |
tcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtacta |
316 |
Q |
| |
|
||| |||| ||||||||| ||| ||||||||||||||||||||| | ||| || |||||||||||||||||||||||| |||| ||| | | ||||| |
|
|
| T |
17344354 |
tcagcgtcggtatcatcttcgacaagttgtggaaaatacacggtctttcaaaagttctcttccttatcctcccccaagtccacgcttggcatatttacta |
17344255 |
T |
|
| Q |
317 |
ctacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggttta |
406 |
Q |
| |
|
||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17344254 |
ttacatcacatgttctttgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttctcggtggggttta |
17344165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 16 - 406
Target Start/End: Original strand, 26505991 - 26506380
Alignment:
| Q |
16 |
aaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacacaaatt |
115 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||| ||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
26505991 |
aaaattacataatctcacataaacggtaaaaaatacacaaattcatcgttaaataacataaacacaaattcattaaaattcaacaatacggatacaaatt |
26506090 |
T |
|
| Q |
116 |
cagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgta |
215 |
Q |
| |
|
| ||| | |||||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |
|
|
| T |
26506091 |
c-gaacaaattacactattacatgttaataaatattacatttcaaaagatcggacataaagatgtaaagtgttattttcaaccatcacgctaaacatgta |
26506189 |
T |
|
| Q |
216 |
atcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtact |
315 |
Q |
| |
|
| ||||||| |||||||||| ||| ||||||||||||||||||||| | ||| || |||||| |||||||||| |||||| | ||||| || | |||| |
|
|
| T |
26506190 |
agcaacgtcgctatcatcttcgacaagttgtggaaaatacacggtctttcaaaagtgctcttctttatcctccctcaagtccatgcctgacacatttact |
26506289 |
T |
|
| Q |
316 |
actacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggttta |
406 |
Q |
| |
|
| || || | ||||||| |||||||||||||||||||||||| | ||||||||||||||| ||||| | |||||| |||||||||||| |
|
|
| T |
26506290 |
attatatcacatgttctttgatttgaaccaatatggataaagcatctgtcaagttttgcctttaactcattcaacttgccggtggggttta |
26506380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 57 - 296
Target Start/End: Complemental strand, 16109641 - 16109402
Alignment:
| Q |
57 |
ttcatcgttaaattacata-aacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagac |
155 |
Q |
| |
|
||||||||||||||||| | ||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
16109641 |
ttcatcgttaaattacacataacacaaattcattaaaattcaacattacagacacaaattc-gaaaacattacacaattacactttaataaatattacac |
16109543 |
T |
|
| Q |
156 |
ttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatac |
255 |
Q |
| |
|
||||||||||| |||||||||||| |||| |||||| ||||||||||| | ||| |||||| |||| || ||||||||||||| |||| |||| ||||| |
|
|
| T |
16109542 |
ttcaacggatcagacataaagatggaaaatgttattctcaaccatcacgctaaatatgtaagcaacatcgctatcatctttgagaagttatggataatac |
16109443 |
T |
|
| Q |
256 |
acggtcctccaacggtcctcttccttatcctcccccaagtc |
296 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
16109442 |
acggtcttccaaaaatcctcttccttatcctccctcaagtc |
16109402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 6374977 - 6374692
Alignment:
| Q |
16 |
aaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacata-aacacgaattcattaaaattcaacaatacggacacaaat |
114 |
Q |
| |
|
||||| |||||||| || ||||||| || |||||| ||| ||| || |||||||||| | ||||| |||| |||||||||||||| ||| |||| |||| |
|
|
| T |
6374977 |
aaaatcacataatcgcaaataaacgatccaaattacacaaattcgtcattaaattacacataacacaaatttattaaaattcaacattactgacataaat |
6374878 |
T |
|
| Q |
115 |
tcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgt |
214 |
Q |
| |
|
|| ||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||| | | |||||||| |
|
|
| T |
6374877 |
tc-gaacacattacactattacacattaataaatattacacttcaacggatcagacataaagatgtaaaatattatttttaaccattaacctaaacatgt |
6374779 |
T |
|
| Q |
215 |
aatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgc |
301 |
Q |
| |
|
|||||||||| || ||||||||||| ||||||||| |||| |||||| || || |||| ||||||||||||||||||||| |||| |
|
|
| T |
6374778 |
aatcaacgtcgctgtcatctttgacaagttgtggataatatacggtcttcaaaaaatcctattccttatcctcccccaagtccacgc |
6374692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 76 - 357
Target Start/End: Complemental strand, 33937292 - 33937012
Alignment:
| Q |
76 |
aacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaa |
175 |
Q |
| |
|
||||| ||||||||||||||||||| ||| || ||||||| ||| |||||||||||||||| ||||||||||||| ||||||| || || ||||||| |
|
|
| T |
33937292 |
aacacaaattcattaaaattcaacattacagagacaaattt-gaacacattacactattacatgttaataaatattacacttcaatagaccgaacataaa |
33937194 |
T |
|
| Q |
176 |
gatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctc |
275 |
Q |
| |
|
|| |||||| |||||||||||||| | | |||||||||||||| ||||||||||| || || |||||||||||||| | ||| ||||| |||||| |
|
|
| T |
33937193 |
gaagtaaaatattattttcaaccattaatctaaacatgtaatcaatgtcactatcattttcgataagttgtggaaaatatatcgtcttccaaaagtcctc |
33937094 |
T |
|
| Q |
276 |
ttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaag |
357 |
Q |
| |
|
||| |||||||||| |||||| ||| || || ||||||||||||| | ||||||| ||||| |||||||||||||||| |
|
|
| T |
33937093 |
ttctttatcctccctcaagtccacgtttgacacatgtactactacatgagatgttctttgattgtcaccaatatggataaag |
33937012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 61 - 200
Target Start/End: Original strand, 8736296 - 8736435
Alignment:
| Q |
61 |
tcgttaaattacata-aacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttca |
159 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||| ||| ||||||| |||||||| ||||||||||||| ||||| |
|
|
| T |
8736296 |
tcgttaaattacatataacacaaattcattaaaattcaacattacaaacacaaattc-gaacgcattacattattacacgttaataaatattacacttcg |
8736394 |
T |
|
| Q |
160 |
acggatcggacataaagatgtaaaaggttattttcaaccat |
200 |
Q |
| |
|
| | ||| |||||||| |||||||| ||||||||||||||| |
|
|
| T |
8736395 |
atgaatcagacataaaaatgtaaaatgttattttcaaccat |
8736435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 16109757 - 16109657
Alignment:
| Q |
19 |
attacataatctcacataaacggtcaaa--attatccaacttcatcgttaaattacata-aacacgaattcattaaaattcaacaatacggacacaaatt |
115 |
Q |
| |
|
|||||||||| ||||||||||| || || |||| ||| ||||||||||||||||| | ||||| ||||||||||||||||||| ||| |||||||||| |
|
|
| T |
16109757 |
attacataatatcacataaacgatccaactattacacaaattcatcgttaaattacacataacacaaattcattaaaattcaacattacagacacaaatt |
16109658 |
T |
|
| Q |
116 |
c |
116 |
Q |
| |
|
| |
|
|
| T |
16109657 |
c |
16109657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 28197020 - 28196944
Alignment:
| Q |
147 |
atattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgt |
223 |
Q |
| |
|
|||||| ||||||| ||||| |||| ||| |||||||| ||||||||||||||| | | ||||| ||||||||||| |
|
|
| T |
28197020 |
atattacacttcaatggatcagacacaaatatgtaaaatgttattttcaaccattaacctaaacacgtaatcaacgt |
28196944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 218
Target Start/End: Original strand, 20159592 - 20159686
Alignment:
| Q |
124 |
attacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatc |
218 |
Q |
| |
|
|||||||||||||| | |||| ||||| ||||||| ||| || ||| |||||||||| | |||||||||||||||| | |||||||||||| |
|
|
| T |
20159592 |
attacactattacatgtcaatacgtattacacttcaatggagcgcacacaaagatgtaacatattattttcaaccatcaatctaaacatgtaatc |
20159686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 328; Significance: 0; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 5 - 416
Target Start/End: Complemental strand, 44226093 - 44225687
Alignment:
| Q |
5 |
cataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatac |
104 |
Q |
| |
|
||||| |||||||||| ||||||||||||||||||||||||||||| |||| || | ||||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
44226093 |
cataaatttctaaaatcacataatctcacataaacggtcaaaattacccaaattaaacgttaaattacatcaacacaaattcattaaaattcaacaatac |
44225994 |
T |
|
| Q |
105 |
ggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcaca |
204 |
Q |
| |
|
|||||||||||| ||||||||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44225993 |
ggacacaaattcggaaaacattacacaa-----cgttaataaatattacacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacg |
44225899 |
T |
|
| Q |
205 |
cgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctg |
304 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
44225898 |
cgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaacggtcctcttccttatcctcccccaagtccacgcctg |
44225799 |
T |
|
| Q |
305 |
gaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggtt |
404 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
44225798 |
gaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttgtcggtggggtt |
44225699 |
T |
|
| Q |
405 |
tatagtgaacca |
416 |
Q |
| |
|
|||||||||||| |
|
|
| T |
44225698 |
tatagtgaacca |
44225687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 149 - 415
Target Start/End: Complemental strand, 23943219 - 23942953
Alignment:
| Q |
149 |
attagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtgg |
248 |
Q |
| |
|
|||| |||||||||||||||||| |||||| ||| |||||| |||||||| || | ||||||| ||||||| || ||||||||||||| |||||||| |
|
|
| T |
23943219 |
attacacttcaacggatcggacaaaaagatacaaattgttattctcaaccattaccctaaacatgaaatcaacctcgctatcatctttgagaagttgtgg |
23943120 |
T |
|
| Q |
249 |
aaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaata |
348 |
Q |
| |
|
| ||||||||||| |||| ||||||||||||||||||||||||| | ||||| || | ||||| |||| || |||||| |||||||||||||| |
|
|
| T |
23943119 |
ataatacacggtcttccagaagtcctcttccttatcctcccccaagcgcaggcctgacacatttactatgacatgatgtgttctatgatttgaaccaatt |
23943020 |
T |
|
| Q |
349 |
tggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggtttatagtgaacc |
415 |
Q |
| |
|
| |||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||| |||||||| |
|
|
| T |
23943019 |
tagataaagaaggcgtcaagttttgcgttcaactcgtccaacttgtcggcggggtttacagtgaacc |
23942953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 226 - 406
Target Start/End: Complemental strand, 24503929 - 24503749
Alignment:
| Q |
226 |
ctatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataat |
325 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||| | ||| |||||||||||||||||||||||||| |||| ||| || | ||||| ||||| | |
|
|
| T |
24503929 |
ctatcatctttgagaagttgtggaaaatatacggtctttcaaaattcctcttccttatcctcccccaagtccacgcttggcacatctactattacatcac |
24503830 |
T |
|
| Q |
326 |
atgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggttta |
406 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
24503829 |
atgttctttgatttgaaccaatatggataaagaagtcgtcaagttttctcttcaacacgtccaacttgtcggtggggttta |
24503749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 23943340 - 23943212
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| ||| || ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
23943340 |
tccataaatttatagaattacataatctcacataaacggtcaaaattacccaaataaatcgttaaattacataaacacaaattcattaaaattcaacaat |
23943241 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacact |
131 |
Q |
| |
|
|| ||||||||| |||||||||||||| |
|
|
| T |
23943240 |
acatacacaaatttggaaaacattacact |
23943212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 29248731 - 29248888
Alignment:
| Q |
76 |
aacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaa |
175 |
Q |
| |
|
||||| |||||||| |||||||||| |||||||||||||| | ||||||||||||||||||| || |||||||||| ||||||| ||||| |||||||| |
|
|
| T |
29248731 |
aacacaaattcatttaaattcaacattacggacacaaatt--ggaaacattacactattacacgttcataaatattacacttcaatggatcagacataaa |
29248828 |
T |
|
| Q |
176 |
gatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctt |
235 |
Q |
| |
|
|||| |||| ||||||||||||||| | | |||||||||| ||||||| |||||||||| |
|
|
| T |
29248829 |
gatgcaaaatgttattttcaaccattaaattaaacatgtaaccaacgtctctatcatctt |
29248888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 10526165 - 10526278
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
10526165 |
tccataaatttctaaaattacataatctcacataaacggttcgaattacccaaattcatcgttaaattacataaacacaaattcattaaaattcaataat |
10526264 |
T |
|
| Q |
103 |
acggacacaaattc |
116 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
10526265 |
acagacacaaattc |
10526278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 10526761 - 10526838
Alignment:
| Q |
141 |
taataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatc |
218 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10526761 |
taataaatattacacttcaacgaatcggacataaagaagtaaaaggttattttcaaccatcacgcgaaacatgtaatc |
10526838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 2368416 - 2368574
Alignment:
| Q |
16 |
aaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacacaaatt |
115 |
Q |
| |
|
||||||||||||||| || |||||||| ||||||| |||| || || ||||||||||||||||| |||||| ||||||||||| ||||||||| |
|
|
| T |
2368416 |
aaaattacataatcttacctaaacggtaaaaattaaccaaatttattgttaaattacataaacaaaaattca-------tcaacaatacgaacacaaatt |
2368508 |
T |
|
| Q |
116 |
cagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaa |
182 |
Q |
| |
|
| ||| | ||||| ||||||| ||||||||||||| | ||||| |||||||||||||| |||||| |
|
|
| T |
2368509 |
c-gaacaaattacgatattacatgttaataaatattatatttcaatggatcggacataaatatgtaa |
2368574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 26154181 - 26154058
Alignment:
| Q |
26 |
aatctcacataaacggtcaaaattatccaacttcatcgttaaattacata-aacacgaattcattaaaattcaacaatacggacacaaattcagaaaaca |
124 |
Q |
| |
|
|||| |||||||||| || |||||| ||| ||||||||||||||||| | ||||| |||||||||||||||||| || ||||||||||| ||| ||| |
|
|
| T |
26154181 |
aatcacacataaacgatccaaattacacaaattcatcgttaaattacacataacacaaattcattaaaattcaacgttagagacacaaattc-gaacaca |
26154083 |
T |
|
| Q |
125 |
ttacactattacacattaataaata |
149 |
Q |
| |
|
||||| |||||||| |||||||||| |
|
|
| T |
26154082 |
ttacattattacacgttaataaata |
26154058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 12869534 - 12869382
Alignment:
| Q |
16 |
aaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacata-aacacgaattcattaaaattcaacaatacggacacaaat |
114 |
Q |
| |
|
||||| |||||||| || ||||||| || |||||| ||| || ||||||||||||| | |||| |||||||||||||| | | || |||||||||| |
|
|
| T |
12869534 |
aaaatcacataatcgcatataaacgatccaaattacacaaactcgtcgttaaattacacataacataaattcattaaaattgattattatggacacaaat |
12869435 |
T |
|
| Q |
115 |
tcagaaaacattacactattacacattaataaatattagacttcaacggatcgg |
168 |
Q |
| |
|
||| || ||||||||||||||| | ||||||||||||| ||||||| ||||||| |
|
|
| T |
12869434 |
tca-aacacattacactattacgcgttaataaatattacacttcaatggatcgg |
12869382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 296
Target Start/End: Complemental strand, 26153643 - 26153558
Alignment:
| Q |
211 |
atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtc |
296 |
Q |
| |
|
|||||||||| ||| |||||||||| || |||||||||||||| |||||| ||||| ||| ||||| ||||||||||||||||| |
|
|
| T |
26153643 |
atgtaatcaatgtcgctatcatcttcgataagttgtggaaaatatacggtcttccaaaagtcatcttctttatcctcccccaagtc |
26153558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 12168715 - 12168783
Alignment:
| Q |
30 |
tcacataaacggtcaaaattatccaacttcatcgttaaattacata-aacacgaattcattaaaattca |
97 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||||| | ||||| |||||||||||||||| |
|
|
| T |
12168715 |
tcacataaacggtcaaaattacacaaattcatcgttaaattacacacaacacaaattcattaaaattca |
12168783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 26153912 - 26153860
Alignment:
| Q |
148 |
tattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccat |
200 |
Q |
| |
|
||||| ||||||| |||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
26153912 |
tattacacttcaatggatcggacataaagagataaaatgttattttgaaccat |
26153860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 326; Significance: 0; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 11 - 416
Target Start/End: Original strand, 30703488 - 30703893
Alignment:
| Q |
11 |
tttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacac |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30703488 |
tttctaaaattacataatctcacataaacggtcaaaattacccaaattcatcgttaaattacatcaacacaaattcattaaaattcaacaatacggacac |
30703587 |
T |
|
| Q |
111 |
aaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaac |
210 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
30703588 |
aaattaggaaaacattacactattgcacattaataaatattacacttcaacggatcagacataaagatgtaaaaggttattttcaaacatcacgcgaaac |
30703687 |
T |
|
| Q |
211 |
atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaactt |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
30703688 |
atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaacgatcctcttccttatcctcccccaagtccacgcttggaactt |
30703787 |
T |
|
| Q |
311 |
gtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggtttatagt |
410 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||| |
|
|
| T |
30703788 |
gtactactatataatatgttctgtgatttgaaccaatatggataaagaagtcatcaagttttgccttcaactcgtccaacttatcagtaggttttatagt |
30703887 |
T |
|
| Q |
411 |
gaacca |
416 |
Q |
| |
|
|||||| |
|
|
| T |
30703888 |
gaacca |
30703893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 3 - 373
Target Start/End: Complemental strand, 1181134 - 1180763
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
1181134 |
tccataaatttctaaaattacataatctcatataaacggtcaaaattacccaaattcatcgttaaattacatcaacacaagttcattaaaattcaacaat |
1181035 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaa-tattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatc |
201 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
1181034 |
acagacacaaattcgaaaaacattacactattacacgttaataaaatattacacttcaacggatcggacataaagatgtaaaaggttattttcaacaatc |
1180935 |
T |
|
| Q |
202 |
acacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgc |
301 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||||||| |||| |
|
|
| T |
1180934 |
acacgaaacatgtaatcaacgtcacgatcatctttgactagttgtggaatatacacggtcttccaacagtcctctttcttatcctcccccaagtccacgc |
1180835 |
T |
|
| Q |
302 |
ctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttg |
373 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1180834 |
ctggaacttgtactaatgcataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttg |
1180763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 52 - 416
Target Start/End: Complemental strand, 12067634 - 12067273
Alignment:
| Q |
52 |
ccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatatt |
151 |
Q |
| |
|
|||| |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
12067634 |
ccaaattcatcgttaaattacatcagcacaaattcattaaaattcaacaatacggacacaaattcggaaaacattacactattacacgttaataaatatt |
12067535 |
T |
|
| Q |
152 |
agacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaa |
251 |
Q |
| |
|
| ||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12067534 |
acacttcaacg-atcagacataaagatgtaaaaggttattttcaaccatcacgcgaaacatgtaatcaacgtcactattatctttgactagttgtggaaa |
12067436 |
T |
|
| Q |
252 |
atacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatgg |
351 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
12067435 |
atacacggtcttccaacggtcctcttccttatcct--cccaagtccacgcctggaatttgtactactacataatatgttctgtgatttgaaccaatattg |
12067338 |
T |
|
| Q |
352 |
ataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggtttatagtgaacca |
416 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
12067337 |
ataaagaagtcgtcaaattttgccttcaactcgtccaacttgtcgggggggtttatagtgaacca |
12067273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 3 - 416
Target Start/End: Complemental strand, 25818795 - 25818384
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| ||| ||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
25818795 |
tccataaatttttaaaattacataatctcacgtaaactatcaaaattacccaaattcatcgttaaattacataaacacaaattcattaaaattcaataat |
25818696 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|||||||||||||| ||| | ||||| ||||| || ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25818695 |
acggacacaaattc-gaacaaattacgatattaaacgttaataaatatcacacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
25818597 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | ||| | |
|
|
| T |
25818596 |
cgcgaaacatgtaatcaacgtcgctatcatctttgactagttgtggaaaatacacggtcttccaacggccctcttccttatcctcccccaag-ccacgac |
25818498 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
|| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||||||| |
|
|
| T |
25818497 |
tgacacttgtactactacataacatgttctgtgatttgaaccaatatggataaagaagttgtcaagttttaccttcaactcatccaacttgtcggtgggg |
25818398 |
T |
|
| Q |
403 |
tttatagtgaacca |
416 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
25818397 |
tttacagtgaacca |
25818384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 66 - 406
Target Start/End: Complemental strand, 23943240 - 23942902
Alignment:
| Q |
66 |
aaattacataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggat |
165 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| |||| |||||||||||| |
|
|
| T |
23943240 |
aaattacataaacaaaaatttattaaaattcaacaatacggacacaaattcgaaaaacattacactattacacttaaataatgattacacttcaacggat |
23943141 |
T |
|
| Q |
166 |
cggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctcc |
265 |
Q |
| |
|
|||||| |||||| ||| |||||| |||||||| || | ||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||| ||| |
|
|
| T |
23943140 |
cggacaaaaagatacaaagtgttattctcaaccattaccctaaacatgaaatcaacgtcgctatcatctttgagaagttgtggataatacacggtcttcc |
23943041 |
T |
|
| Q |
266 |
aacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtc |
365 |
Q |
| |
|
| ||||||||||||||||||||||||||| | |||||| || | ||||| || ||| |||||| |||||||||||||| |||||||||||| |||| |
|
|
| T |
23943040 |
agaagtcctcttccttatcctcccccaagtccaggcctggcacatttactatgac--aatgtgttctatgatttgaaccaatttggataaagaaggcgtc |
23942943 |
T |
|
| Q |
366 |
aagttttgccttcaactcgtccaacttatcggtggggttta |
406 |
Q |
| |
|
|||||||| |||||||||||||||||| || |||||||||| |
|
|
| T |
23942942 |
aagttttgtcttcaactcgtccaacttgtctgtggggttta |
23942902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 41 - 332
Target Start/End: Original strand, 7318214 - 7318504
Alignment:
| Q |
41 |
gtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacat |
140 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||| | |
|
|
| T |
7318214 |
gtcaaaattacccaaattcatcgttaaattacataaacacaaattctttaaaattcaacaatacggacacaaattt-gaacaaattacactattacacgt |
7318312 |
T |
|
| Q |
141 |
taataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgact |
240 |
Q |
| |
|
|||||||||||| |||||||| ||| |||||||||||||||| |||||||||||||||||| | ||||| |||| ||||||| |||||||||| || |
|
|
| T |
7318313 |
taataaatattacacttcaacatatctgacataaagatgtaaagcgttattttcaaccatcacgctaaacacgtaagcaacgtcgctatcatcttcgaga |
7318412 |
T |
|
| Q |
241 |
agttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttct |
332 |
Q |
| |
|
||||||||||||||||| ||| ||||| || |||||||||||||||||| | ||| |||||||| || | ||||| ||||| | ||||||| |
|
|
| T |
7318413 |
agttgtggaaaatacacagtcttccaaaagttctcttccttatcctcccctaggtccacgcctgggacatttactattacatcacatgttct |
7318504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 36185781 - 36185893
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| || ||||||| ||||||| | |||||||||||||| ||| |||| |||||||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
36185781 |
tccataaattcctaaaatgacataatttgacataaacggtcaattttacccaaattcatcgttaaattacataagcataaattcattaaaattcaacaat |
36185880 |
T |
|
| Q |
103 |
acggacacaaatt |
115 |
Q |
| |
|
||||||||||||| |
|
|
| T |
36185881 |
acggacacaaatt |
36185893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 38810198 - 38810343
Alignment:
| Q |
31 |
cacataaacggtcaaaattatccaacttcatcgttaaattacata-aacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattaca |
129 |
Q |
| |
|
|||||||||| | |||||| ||| || |||||||||||||| | ||||| ||||||||||||||||||| | | | ||||||||| ||| |||||||| |
|
|
| T |
38810198 |
cacataaacgattcaaattacacaaatttatcgttaaattacacataacacaaattcattaaaattcaacattgcaggcacaaattc-gaacacattaca |
38810296 |
T |
|
| Q |
130 |
ctattacacattaataaatattagacttcaacggatcggacataaag |
176 |
Q |
| |
|
|||||||| ||| | ||||||| ||||||| ||||||||||||||| |
|
|
| T |
38810297 |
ctattacatgttactcaatattacacttcaatggatcggacataaag |
38810343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 23943281 - 23943238
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaa |
46 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23943281 |
tccataaatttataaaattacataatctcacataaacggtcaaa |
23943238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 322; Significance: 0; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 3 - 416
Target Start/End: Complemental strand, 19379845 - 19379432
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
19379845 |
tccataaatttctaaaattacataatctcacacaaacggtcaaaattacccaaattcatcgttaaattacatcaacacaaattcattaaaattcaacaat |
19379746 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|| ||||||||||| ||||| ||||||||||||||| |||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19379745 |
acagacacaaattcggaaaatattacactattacacgttaaaaaatgttacacttcaacggatcggacataaagatgtaaaaggttattttcaagcatca |
19379646 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||||| |
|
|
| T |
19379645 |
cgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttccaacggtcatcttccttatcctcccccaagcccacgcc |
19379546 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19379545 |
tggaacttgtactactacataatatgttctgtgatttgaaccaacatggataaataagtcgtcaagttttgccttcaactcgtccaacttgtcggtgggg |
19379446 |
T |
|
| Q |
403 |
tttatagtgaacca |
416 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
19379445 |
tttattgtgaacca |
19379432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 100 - 416
Target Start/End: Complemental strand, 35004393 - 35004079
Alignment:
| Q |
100 |
aatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaacca |
199 |
Q |
| |
|
||||||||||||||||| ||| | ||||| |||||||| ||||||||||||| |||||||| ||||||||||||||||||| || |||||| ||||||| |
|
|
| T |
35004393 |
aatacggacacaaattc-gaataaattacgatattacacgttaataaatattacacttcaacagatcggacataaagatgtagaatgttattctcaacca |
35004295 |
T |
|
| Q |
200 |
tcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaac |
299 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||| |||||| ||||||| ||||||||||||| ||||| ||| ||||||||||||||||||||||| || |
|
|
| T |
35004294 |
tcacgcgaaacatgtaatcaacgtcgctatcatatttgacaagttgtgaaaaatacacggtcttccaaaagtcttcttccttatcctcccccaagtccac |
35004195 |
T |
|
| Q |
300 |
gcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtg |
399 |
Q |
| |
|
||||| |||||||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||| |||||| |
|
|
| T |
35004194 |
tcctggcacttgtactactacataacatgttctatgatttgaatcaatatggat-aagaagtcgtcaaattttgacttcaactcgtccaacttgtcggtg |
35004096 |
T |
|
| Q |
400 |
gggtttatagtgaacca |
416 |
Q |
| |
|
| ||||| ||||||||| |
|
|
| T |
35004095 |
gtgtttacagtgaacca |
35004079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 3 - 382
Target Start/End: Original strand, 26224561 - 26224939
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| ||| ||||| |||||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26224561 |
tccataaatttataaaaatacataatctcacataaa-ggtcaaaattacccaaattcattgttaaattacataaacacaaattcattaaaattcaacaat |
26224659 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|| ||||||||||||||||| |||||||| |||||| | || ||||| || |||||||||||||||||| |||||| ||| || ||| |||||||| | |
|
|
| T |
26224660 |
acagacacaaattcagaaaatattacactgttacacttaaacaaatactacacttcaacggatcggacaaaaagatacaaagtgtaattctcaaccatga |
26224759 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||| |||| | ||||||||| |||| ||||| |||||||||||||||||| |||||||| ||||| |
|
|
| T |
26224760 |
acctaaacatgtaatcaacgtcactatcatcttcgacaagttctagaaaatacaaggtcttccaaaagtcctcttccttatcctctcccaagtccacgcc |
26224859 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaact |
382 |
Q |
| |
|
|| || | ||||| |||| | |||||| |||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
26224860 |
tgacacatttactatcacatcacgtgttctatgatttgaaccaatatggataaagaagtcgtcaaataatgccttcaact |
26224939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 3 - 416
Target Start/End: Original strand, 9827105 - 9827511
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||| | ||||||| |||||||| ||||| ||| |||| |||||||||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
9827105 |
tccataaatttctaaaatgatataatctaacataaacagtcaattttacccaaattcatcgttaaattacataagcacaaattcattaaaattcaacaat |
9827204 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|| |||||||||| ||||||||||||||||||||| | ||| ||||||| |||||||||||||||||| |||||| ||| |||||| |||||||| | |
|
|
| T |
9827205 |
acatacacaaattcggaaaacattacactattacacttaaattaatattacacttcaacggatcggacaaaaagatacaaagtgttattctcaaccatta |
9827304 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||| |||||| || ||||||| ||| |||| ||| ||||||||||||| ||||||||| ||||| |
|
|
| T |
9827305 |
acctaaacatgtaatcaacgtcgctatcatctttgagaagttgttgataatacacagtcttccagaagtcttcttccttatcctgccccaagtccacgcc |
9827404 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
|| || | ||||| |||| | |||||| |||| ||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9827405 |
tgacacatttactatgacatcacgtgttctatgat-------aatttggataaagaaggcgtcaagttttgccttcaactcgtccaacttgtcggtgggg |
9827497 |
T |
|
| Q |
403 |
tttatagtgaacca |
416 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
9827498 |
tttatagtgaacca |
9827511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 57 - 408
Target Start/End: Original strand, 22728302 - 22728652
Alignment:
| Q |
57 |
ttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagact |
156 |
Q |
| |
|
||||||| |||||||||||||||| || ||||||||||||| |||||| |||||||||| ||| | | |||| |||||||| ||||||||||||| ||| |
|
|
| T |
22728302 |
ttcatcgctaaattacataaacacatatccattaaaattcaaaaatacgaacacaaattc-gaacaaaatacaatattacacgttaataaatattacact |
22728400 |
T |
|
| Q |
157 |
tcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaataca |
256 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| || | | ||||||| |||||| | ||||||||||||| ||| |||||||||||| |
|
|
| T |
22728401 |
tcaacggatcggacataaagatgtaaaatgttattttcaataattaggctaaacatgacatcaacattgctatcatctttgagaagtagtggaaaataca |
22728500 |
T |
|
| Q |
257 |
cggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaa |
356 |
Q |
| |
|
| ||| ||||| |||||||||||| |||||||||||||| ||| ||| |||||||| || |||||| |||| | |||||||||||||| |||||||| |
|
|
| T |
22728501 |
cagtcttccaaaagtcctcttccttctcctcccccaagtccacggttggcacttgtacaacgacataacttgttatatgatttgaaccaatttggataaa |
22728600 |
T |
|
| Q |
357 |
gaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggtttata |
408 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
22728601 |
gaagtcgtaaagttttgccttcaactcgtccaacttgtaggtggggtttata |
22728652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 76 - 406
Target Start/End: Complemental strand, 28759053 - 28758721
Alignment:
| Q |
76 |
aacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaa |
175 |
Q |
| |
|
||||| |||||||| ||||||| || || ||||||||||| ||| |||||| |||||||||| || || ||||||| ||||||||||||| |||||||| |
|
|
| T |
28759053 |
aacacaaattcatttaaattcatcactatagacacaaattc-gaacacattatactattacacgttcattaatattacacttcaacggatcagacataaa |
28758955 |
T |
|
| Q |
176 |
gatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctc |
275 |
Q |
| |
|
|||||||| ||||| |||||||| | |||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| | || || || |
|
|
| T |
28758954 |
gatgtaaagtgttatcctcaaccatttacctaaacatgtaatcaacgtcgctatcatctttgagaagttgtggataatacacggtctttcagaagtattc |
28758855 |
T |
|
| Q |
276 |
ttccttatcctcccccaagtcaacgcct---ggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagtttt |
372 |
Q |
| |
|
|| |||||||||||||||| |||||| || || | ||||| |||| | ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28758854 |
atcattatcctcccccaagtacacgcctcccggcacatttactatcacatcacatgttctatgatttgaaccaatatggataaagaagtcgtcaagtttt |
28758755 |
T |
|
| Q |
373 |
gccttcaactcgtccaacttatcggtggggttta |
406 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||| |
|
|
| T |
28758754 |
gccttcaactcatccaacttgtcggtggggttta |
28758721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 35004471 - 35004419
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaa |
55 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
35004471 |
tccataaatttctaaaattacataatatcacataaacggtcaaaattacccaa |
35004419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 318; Significance: 1e-179; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 3 - 416
Target Start/End: Complemental strand, 1031358 - 1030945
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| |||||||||||||||||| || |
|
|
| T |
1031358 |
tccataaatttctaaaattacataatctcacataaacggtcaaaattacccaaattcatcgttaaattacatcaacacaaattcattaaaattcaacgat |
1031259 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1031258 |
acggacacaaattcggaaaacattacactattacacgttaataaatattacacttcaacgcatcggacataaagatgtaaaaggttattttcaaccatca |
1031159 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || || |
|
|
| T |
1031158 |
cgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcttttaacggtcctcttccttatcctcccccaagtccacacc |
1031059 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||| | ||||| | |
|
|
| T |
1031058 |
tggaacttgtactactacataatatgttatgtgatttgaaacaatatggataaaaaagtcgtcaagttttgtcttcaacccgtccaacttgttggtggcg |
1030959 |
T |
|
| Q |
403 |
tttatagtgaacca |
416 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1030958 |
tttatagtgaacca |
1030945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 23232170 - 23232071
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||| ||||| ||| ||| |||||||||||||||||||| ||| ||||||||||||| ||||||| |
|
|
| T |
23232170 |
tccataaatttctaaaatgacataatctgacataaacagtcaattttaccca--ttcatcgttaaattacataagcacaaattcattaaaatccaacaat |
23232073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 76 - 233
Target Start/End: Original strand, 7648023 - 7648174
Alignment:
| Q |
76 |
aacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaa |
175 |
Q |
| |
|
||||| ||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| ||||||||||||| ||||||| ||| || ||| || |
|
|
| T |
7648023 |
aacacaaattcattaaaatgcaacatcacgaacacaaattt-gaacacattacactatg-----ttaataaatattacacttcaatggagcgaacacgaa |
7648116 |
T |
|
| Q |
176 |
gatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatc |
233 |
Q |
| |
|
|| ||||| ||||||||||| ||| | | |||||||||||||||||| | |||||| |
|
|
| T |
7648117 |
tatataaaatgttattttcaagcattaacctaaacatgtaatcaacgtcgccatcatc |
7648174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 3 - 416
Target Start/End: Original strand, 50334492 - 50334897
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| ||||| ||||||||||||||| |||||| |||| ||||| |||| ||||| |||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
50334492 |
tccataaatttctcaaattacataatctcttataaacagtcagaattacccaaattcattgttaaattacatcaacacaaattcattaaaattcaacaat |
50334591 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattac------acattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaa |
196 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||| |||||||||||||| | |||||||| |||| ||||||||||||||||| ||||||||||| |
|
|
| T |
50334592 |
acagacacaaattcgaaaaacattacactattactattacacattaataaatataacacttcaacagatcagacataaagatgtaaaaagttattttcaa |
50334691 |
T |
|
| Q |
197 |
ccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtc |
296 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
50334692 |
ccatcacgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtc--------------ttccttatcctcccccaagtc |
50334777 |
T |
|
| Q |
297 |
aacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcg |
396 |
Q |
| |
|
|||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
50334778 |
tacgcatagaacttgtactactacataatatgttctgtgatttgaaccaatatgaataaagaagtcgtcaagttttgctttcaactcgtccaacttgtca |
50334877 |
T |
|
| Q |
397 |
gtggggtttatagtgaacca |
416 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
50334878 |
gtggggtttatagtcaacca |
50334897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 3 - 264
Target Start/End: Complemental strand, 1938989 - 1938728
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
1938989 |
tccataaatttctaaaattacataatctcacataaacggccaaaattactcaaattcatcgttaaattacatcaacacaaattcattaaaattcaacaat |
1938890 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||| | ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1938889 |
acagacacaaattcggaaaacattacactattatatgttaataaatattacacttcaatggatcggacataaagatgtaaaaggttattttcaaccatca |
1938790 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctc |
264 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1938789 |
cgcgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctc |
1938728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 142 - 416
Target Start/End: Original strand, 50006869 - 50007133
Alignment:
| Q |
142 |
aataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgacta |
241 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
50006869 |
aataaatattacacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacgggaaacttgtaatcaacgtcagtatcatctttgacta |
50006968 |
T |
|
| Q |
242 |
gttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttga |
341 |
Q |
| |
|
||||||||||||||||||| |||||| || |||||||||||||||||||| || ||||||||||||||| |||||||| ||| ||| || |
|
|
| T |
50006969 |
gttgtggaaaatacacggttttccaacaatcatcttccttatcctcccccaaatccacgcctggaacttgtcctactaca----------tgtcattaga |
50007058 |
T |
|
| Q |
342 |
accaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggtttatagtgaacca |
416 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
50007059 |
accaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttgtcggtggggtttatagtgaacca |
50007133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 3 - 280
Target Start/End: Original strand, 156523 - 156800
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| ||| |||||||||||||||| ||||||||||| ||||| | |||| |||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
156523 |
tccataaatttataaaattacataatcttacataaacggtaaaaatcacccaaattcatcgttaaattacataaacacaaattcattaaaattcaacaat |
156622 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||| | | ||||| |||| |||||||||||||||||| |||||| ||| |||||| |||||||| | |
|
|
| T |
156623 |
acggacacaaattcggaaaacatttcactattacccttaaataatgattacacttcaacggatcggacaaaaagatacaaagtgttattctcaaccatta |
156722 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttcct |
280 |
Q |
| |
|
| | ||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||| |||| ||||||||||| |
|
|
| T |
156723 |
ccctaaacatgaaatcaacgtcgctatcatctttgagaagttgtggataatacacggtcttccagaagtcctcttcct |
156800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 11 - 305
Target Start/End: Complemental strand, 18486700 - 18486410
Alignment:
| Q |
11 |
tttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacac |
110 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||| ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
18486700 |
tttctaaaatgacataatctgacataaacggtcaattttacccaaattcatcgttaaattacataaacacaaattcattaaaattcaacaatacagacac |
18486601 |
T |
|
| Q |
111 |
aaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaac |
210 |
Q |
| |
|
|||||| ||||||||||||||||||||| | ||||||||||| ||||||||||||| |||| |||||| ||| ||||| |||||||| | | |||| |
|
|
| T |
18486600 |
aaattcggaaaacattacactattacacttaaataaatattacacttcaacggatc-gacaaaaagatacaaagtattattctcaaccattaacctaaac |
18486502 |
T |
|
| Q |
211 |
atgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctgg |
305 |
Q |
| |
|
|||||||||||||| |||||||||||| || ||||| ||||||||||| |||| ||| |||||||||| |||||||||||| || ||||| |
|
|
| T |
18486501 |
atgtaatcaacgtcgctatcatctttg---agaagtggataatacacggtcttccagaagtcttcttccttattctcccccaagtccacacctgg |
18486410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 76 - 402
Target Start/End: Complemental strand, 41784967 - 41784637
Alignment:
| Q |
76 |
aacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaa |
175 |
Q |
| |
|
||||| |||||||| |||||||||| || |||||||||||| ||| ||||||||||||||||| || |||||||||| ||||||| ||||| |||||||| |
|
|
| T |
41784967 |
aacacaaattcatttaaattcaacattaaggacacaaattc-gaacacattacactattacacgttcataaatattacacttcaatggatcagacataaa |
41784869 |
T |
|
| Q |
176 |
gatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcct- |
274 |
Q |
| |
|
||||||||| ||||||||||||||| | || |||||||||||||||||| ||||||| || || ||| ||||||||||| ||| || || ||||| |
|
|
| T |
41784868 |
gatgtaaaatgttattttcaaccattaaactaaacatgtaatcaacgtctctatcatattcgataagtgttggaaaatacattgtcttctaaaagtcctt |
41784769 |
T |
|
| Q |
275 |
----cttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagtt |
370 |
Q |
| |
|
|||||||| |||| |||||| || | ||| || | | || |||||| | ||||||| |||||| |||||||| || |||| | | || |||| |
|
|
| T |
41784768 |
ttcctttccttattctccgtcaagtccactcatggcacatatgcttctacatgagatgttctttgattttcaccaatatcgacaaagtatttgttgagtt |
41784669 |
T |
|
| Q |
371 |
ttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |
|
|
| T |
41784668 |
gtgccttcaactcgtccaacttgtcggtgggg |
41784637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 5534061 - 5534178
Alignment:
| Q |
34 |
ataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactat |
133 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
5534061 |
ataaacggtcaaaattatccaaattcatcgttaatttacatcaacacaaattcattaaaattcaacaatactgacacaaatttagaaaacattacactat |
5534160 |
T |
|
| Q |
134 |
tacacattaataaatatt |
151 |
Q |
| |
|
||||| |||||||||||| |
|
|
| T |
5534161 |
tacacgttaataaatatt |
5534178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 41420216 - 41420104
Alignment:
| Q |
66 |
aaattacataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggat |
165 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||| |||| |||||| ||||| |
|
|
| T |
41420216 |
aaattacataaacacaaattcattaaaattcaacaatatggacacaaattcagaaaacattacactattacacttaaataatgattacacttcagcggat |
41420117 |
T |
|
| Q |
166 |
cggacataaagat |
178 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
41420116 |
cggacaaaaagat |
41420104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 41420257 - 41420220
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacg |
40 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
41420257 |
tccataaatttataaaattacataatctcacataaacg |
41420220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 71 - 416
Target Start/End: Original strand, 20514131 - 20514472
Alignment:
| Q |
71 |
acataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggac |
170 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||| ||| | ||||| |||||||| ||||||||||||| ||||||| ||||| ||| |
|
|
| T |
20514131 |
acataaacacaaattcattaaaattcaacaatacatacacaaattc-gaacaaattacgatattacacgttaataaatattacacttcaatggatctgac |
20514229 |
T |
|
| Q |
171 |
ataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacgg |
270 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
20514230 |
gtaaatatgtaaaaggttattttcaaccatcacgcgaaacatataatcaacgtcgctatcatctttgactagttgtggaaaaaacacggtcttccaacgg |
20514329 |
T |
|
| Q |
271 |
tcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagtt |
370 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20514330 |
tcctcttcattatcctcccccaagtccacgcctggtacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagtt |
20514429 |
T |
|
| Q |
371 |
ttgccttcaactcgtccaacttatcggtggggtttatagtgaacca |
416 |
Q |
| |
|
||||||| ||||||||||| || |||||||||| ||||||||| |
|
|
| T |
20514430 |
ttgcctt---ttcgtccaacttgtcagtggggtttacagtgaacca |
20514472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 57 - 408
Target Start/End: Complemental strand, 27934404 - 27934056
Alignment:
| Q |
57 |
ttcatcgttaaattacataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatat--taga |
154 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| || | |
|
|
| T |
27934404 |
ttcatcgttaaattaaataaacacaaattcattaaaattcaacaatacagacacaaattt-gaacacattacactattacacattaataaatatattaca |
27934306 |
T |
|
| Q |
155 |
cttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaata |
254 |
Q |
| |
|
||||| ||||| |||||||||||||||| |||||||||||||||||| | |||||||||| ||||||| |||||||||| ||| |||||||||||||| |
|
|
| T |
27934305 |
cttcacgggatcagacataaagatgtaaagtgttattttcaaccatcacgctaaacatgtaagcaacgtcgctatcatcttcgacaagttgtggaaaata |
27934206 |
T |
|
| Q |
255 |
cacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggata |
354 |
Q |
| |
|
| |||| ||||| ||||| |||||||| |||||||| ||||||| || | ||||||||||| | ||||||| ||||||| ||||| ||||||| |
|
|
| T |
27934205 |
tatggtcttccaaaagtccttttccttat----ccccaagttcacgcctgacacatttactactacatcagatgttctttgatttgcaccaacatggata |
27934110 |
T |
|
| Q |
355 |
aagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggtttata |
408 |
Q |
| |
|
||| | ||||||||| ||||||||||||||| ||||| |||||| || ||||| |
|
|
| T |
27934109 |
aagtatccgtcaagttgtgccttcaactcgtcgaacttgtcggtgagggttata |
27934056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 66 - 389
Target Start/End: Complemental strand, 53768448 - 53768125
Alignment:
| Q |
66 |
aaattacataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggat |
165 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||||| |||| | |||||||||| |
|
|
| T |
53768448 |
aaattacataaacacaaattcattaaaattcaacaatacaaacacaaattcggaaaacattacactattacacttaaataatgattacagttcaacggat |
53768349 |
T |
|
| Q |
166 |
cggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctcc |
265 |
Q |
| |
|
|||||| |||||| ||| |||||| |||||||| || | |||||| |||||||||||||||||||||||| ||||||||| |||||| ||| ||| |
|
|
| T |
53768348 |
cggacaaaaagatacaaagtgttattctcaaccattacccttaacatgaaatcaacgtcactatcatctttgagaagttgtggataatacaatgtcttcc |
53768249 |
T |
|
| Q |
266 |
aacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtc |
365 |
Q |
| |
|
| ||||||||||||||||||||||||||| | ||||| || | ||||| ||| || |||||| || ||||||||||| |||||||||||| | || |
|
|
| T |
53768248 |
ataagtcctcttccttatcctcccccaagtccaggcctgacacatttactatgacaatatgtgttctatgctttgaaccaatttggataaagaaggcatc |
53768149 |
T |
|
| Q |
366 |
aagttttgccttcaactcgtccaa |
389 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
53768148 |
aagttttgccttcaactcgtccaa |
53768125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 30531373 - 30531215
Alignment:
| Q |
77 |
acacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaag |
176 |
Q |
| |
|
|||| ||||||||||||||||||| ||| ||| ||||||| || ||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30531373 |
acacaaattcattaaaattcaacattacaaacataaattca-aacacattacactattacacgtaaataaatattacacttcaacggatcggacataaag |
30531275 |
T |
|
| Q |
177 |
atgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatcttt |
236 |
Q |
| |
|
|||||||| ||||||||||||||| | | ||||||||||||||| || ||||||||||| |
|
|
| T |
30531274 |
atgtaaaatgttattttcaaccattaacctaaacatgtaatcaacatcgctatcatcttt |
30531215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 54336388 - 54336275
Alignment:
| Q |
4 |
ccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaata |
103 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| |||||| | ||| |||||||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
54336388 |
ccataaatttctaaaattacataatctcacataaacggacaaaatgactcaaattcatcgttaaattacataaacacaaattcattaaaaatcaacaata |
54336289 |
T |
|
| Q |
104 |
cggacacaaattca |
117 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
54336288 |
cggacacaaattca |
54336275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 30930101 - 30930213
Alignment:
| Q |
66 |
aaattacataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggat |
165 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||| | ||||| |||| ||||||||| || |
|
|
| T |
30930101 |
aaattacataaacacaaattcattaaaattcaacaatacgaacacaaattcggaaaatattacactattacacttaaataatgattacacttcaacgaat |
30930200 |
T |
|
| Q |
166 |
cggacataaagat |
178 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
30930201 |
cggacaaaaagat |
30930213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 401
Target Start/End: Complemental strand, 30531211 - 30531090
Alignment:
| Q |
280 |
ttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttca |
379 |
Q |
| |
|
||||| ||||||||||| |||| ||| |||||||||| ||||| | ||||||| |||||| | ||||||||||||| ||| || ||||| |||||||| |
|
|
| T |
30531211 |
ttatcatcccccaagtccacgcatggcacttgtactattacatgagatgttctttgattttcatcaatatggataaaatagttgttaagttgtgccttca |
30531112 |
T |
|
| Q |
380 |
actcgtccaacttatcggtggg |
401 |
Q |
| |
|
|||| |||||||| |||||||| |
|
|
| T |
30531111 |
actcatccaacttgtcggtggg |
30531090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 53768489 - 53768446
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaa |
46 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
53768489 |
tccataaatttataaaattacataatctcacataaacggtcaaa |
53768446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 3 - 416
Target Start/End: Complemental strand, 33238 - 32825
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
33238 |
tccataaatttctaaaattacataatctcacataaacggtcaaaattacccaaattcatcgttaaattacataaacacatattcattaaaaatcaacaat |
33139 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
||||| | |||||| ||||||||||||||||||||| | |||||| |||| ||| |||| ||||||||| |||||| ||| |||||| ||||| || | |
|
|
| T |
33138 |
acggatataaattcggaaaacattacactattacacttaaataaaaattacactacaacagatcggacaaaaagatacaaagtgttattctcaactatta |
33039 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
| |||||||||||||||||| ||||| ||||||| | ||||||| ||||||||||| ||| ||| ||||||||||||||||||||||| | ||| |
|
|
| T |
33038 |
acctaaacatgtaatcaacgtcgctatcgtctttgaaaaattgtggataatacacggtcttcctgaagtcttcttccttatcctcccccaagtccatgcc |
32939 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
|| || | || || |||| | |||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
32938 |
tgacacatttaatatgacatcacgtgttctatcatttgaaccaatttggataaagaagtcgtcaagtttttccttcaactcgtccaacttatcggtgggg |
32839 |
T |
|
| Q |
403 |
tttatagtgaacca |
416 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
32838 |
tttacagtgaacca |
32825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 174; Significance: 2e-93; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 5 - 406
Target Start/End: Original strand, 5015865 - 5016266
Alignment:
| Q |
5 |
cataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaatac |
104 |
Q |
| |
|
||||| ||| |||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
5015865 |
cataaatttataaaattaaataatctcacataaacggtcaaaattacccaaattcatcgttaaattacacaaacacaaattcattaaaattcaacaatac |
5015964 |
T |
|
| Q |
105 |
ggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcaca |
204 |
Q |
| |
|
|||||||||||| ||||| |||||||| |||||| | ||||| |||| |||||||||||||||||| |||||| ||| |||||| |||||||| || |
|
|
| T |
5015965 |
ggacacaaattcggaaaatattacactgttacacttaaataatgattacacttcaacggatcggacaaaaagatacaaagtgttattctcaaccattacc |
5016064 |
T |
|
| Q |
205 |
cgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctg |
304 |
Q |
| |
|
| ||| ||| |||||||||||||||||||||||| ||||||||| ||||||| ||| || | |||||||||||||||||||| |||||| | | ||| |
|
|
| T |
5016065 |
ctaaatatgaaatcaacgtcactatcatctttgagaagttgtggataatacacagtcttctagaagtcctcttccttatcctccctcaagtctaggtctg |
5016164 |
T |
|
| Q |
305 |
gaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggtt |
404 |
Q |
| |
|
| || | ||||| ||| || |||| | |||||||||||||| | ||||||||| |||||||||||||||||||||| |||||||| || ||||| || |
|
|
| T |
5016165 |
gcacatttactatgacaagatgtgttatatgatttgaaccaattcgaataaagaaggcgtcaagttttgccttcaactcatccaacttgtctgtgggatt |
5016264 |
T |
|
| Q |
405 |
ta |
406 |
Q |
| |
|
|| |
|
|
| T |
5016265 |
ta |
5016266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 16 - 400
Target Start/End: Original strand, 15892885 - 15893266
Alignment:
| Q |
16 |
aaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacata-aacacgaattcattaaaattcaacaatacggacacaaat |
114 |
Q |
| |
|
||||| ||||||| ||||||||| || |||||| || ||| ||||||||||||| | ||||| ||||||||||||||||||| |||||| |||||| |
|
|
| T |
15892885 |
aaaatcacataattgcacataaacaatccaaattacaaaatttcgtcgttaaattacacataacacaaattcattaaaattcaacattacggaaacaaat |
15892984 |
T |
|
| Q |
115 |
tcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgt |
214 |
Q |
| |
|
||| || ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| | | |||||||| |
|
|
| T |
15892985 |
tca-aacacattacactattacacgttaataaatattacacttcaacggatcagacataaagatgtaaaatgttattttcaaccattaacctaaacatgt |
15893083 |
T |
|
| Q |
215 |
aatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtac |
314 |
Q |
| |
|
| || || |||||||||||||| ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| |||| ||| | ||||| |
|
|
| T |
15893084 |
a---aatatcgctatcatctttgacaagttgtggaaaatacacggtcttccaaaagtcatcttccttatcctcccccaagtccacgcatggcgcatgtac |
15893180 |
T |
|
| Q |
315 |
tactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgg |
400 |
Q |
| |
|
|| ||||| | ||||||| |||||| |||| ||||||||||| || ||| ||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
15893181 |
tattacatgagatgttctttgattttcaccactatggataaagtagccgttaagttgtgccttcaactcgtccaacttgtcggtgg |
15893266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 3 - 406
Target Start/End: Complemental strand, 5075889 - 5075494
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| ||| |||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5075889 |
tccataaatttataaaattacataatatcacataaacggtcaaaattacccaaattcatcgttaaattacataaacataaattcattaaaattcaacaat |
5075790 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
||| |||||||||| |||||||||||||| | ||||| |||| |||||| |||||||||| |||||| || |||||| |||||||| | |
|
|
| T |
5075789 |
acgaacacaaattcggaaaacattacact--------taaataatgattacacttcagtggatcggacaaaaagatacaacttgttattctcaaccatta |
5075698 |
T |
|
| Q |
203 |
cacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtcctcttccttatcctcccccaagtcaacgcc |
302 |
Q |
| |
|
| | ||||||| |||||||||| ||||||||||||| ||||||||| |||||||||| |||| ||| |||||||| |||||||||||||| | ||| |
|
|
| T |
5075697 |
ccctaaacatgaaatcaacgtcgctatcatctttgagaagttgtggataatacacggttttccagaagtcatcttccttctcctcccccaagtctaggcc |
5075598 |
T |
|
| Q |
303 |
tggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaagaagtcgtcaagttttgccttcaactcgtccaacttatcggtgggg |
402 |
Q |
| |
|
|| || | ||||| ||| || |||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
5075597 |
tgacacatttactatgacaagatgtgttctatgatttgaaccaatttggataaagaagccatcaagttttgccttcaactcgtccaacttgtccgtgggg |
5075498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 3 - 218
Target Start/End: Complemental strand, 33228606 - 33228392
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaat |
102 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
33228606 |
tccataaatttctaaaattacataatctcacataaacggttcaaattacccaaattcatcgttaaattacataaacacaaattcattaaaattcaataat |
33228507 |
T |
|
| Q |
103 |
acggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatca |
202 |
Q |
| |
|
|| ||||||||||| || || ||||| ||||| | |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
33228506 |
acagacacaaattc-gagaaaattacgatattaaatgttaataaatattagacttcaacagatcggacgtaaagatgtaaaatgttattttcaaccatca |
33228408 |
T |
|
| Q |
203 |
cacgaaacatgtaatc |
218 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
33228407 |
cgcgaaacatgtaatc |
33228392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 235
Target Start/End: Complemental strand, 30944987 - 30944830
Alignment:
| Q |
76 |
aacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaa |
175 |
Q |
| |
|
||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||| ||||||| ||||| |||||||| |
|
|
| T |
30944987 |
aacacaaattcatttaaattcaacattacggacacaaatt--gaaaacattacactattacacgttcataaatattacacttcaatggatcagacataaa |
30944890 |
T |
|
| Q |
176 |
gatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctt |
235 |
Q |
| |
|
|||| |||| ||||||||||||||| | | |||||||||| ||||||| |||||||||| |
|
|
| T |
30944889 |
gatgcaaaatgttattttcaaccattaaattaaacatgtaaccaacgtctctatcatctt |
30944830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 416
Target Start/End: Complemental strand, 32076434 - 32076175
Alignment:
| Q |
156 |
ttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatac |
255 |
Q |
| |
|
||||||| |||||| | ||||||||||| ||||| |||||||| | | |||||||||||||||||| | || ||||||| |||||| | ||||| |
|
|
| T |
32076434 |
ttcaacgaatcggagaaaaagatgtaaattgttatcctcaaccattaacctaaacatgtaatcaacgtcgttttcgtctttgagatgttgtgaataatac |
32076335 |
T |
|
| Q |
256 |
acggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataa |
355 |
Q |
| |
|
|| ||| || || |||||||||||||| |||||||||||| ||| ||| || | ||||| |||| | |||||| |||||||||||||||| ||||| |
|
|
| T |
32076334 |
acagtcttctaaaagtcctcttccttattctcccccaagtccacggatggcacatttactatcacatcacgtgttctatgatttgaaccaatatcgataa |
32076235 |
T |
|
| Q |
356 |
agaagtcgtcaagttttgccttcaactcgtccaacttatcggtggggtttatagtgaacca |
416 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
32076234 |
agaagtcgtcaagttttgccatc-actcgtccaacttgtcggtggggtttacagtgaacca |
32076175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 157 - 392
Target Start/End: Original strand, 24619111 - 24619346
Alignment:
| Q |
157 |
tcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaataca |
256 |
Q |
| |
|
|||| |||||||||| ||||||| ||| |||||||||||||| | | |||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
24619111 |
tcaatggatcggacacaaagatgcaaatttttattttcaaccattaacctaaacatgtaatcaacgtcactatcatctttgaaaagttgtggataataca |
24619210 |
T |
|
| Q |
257 |
cggtcctccaacggtcctcttccttatcctcccccaagtcaacgcctggaacttgtactactacataatatgttctgtgatttgaaccaatatggataaa |
356 |
Q |
| |
|
|| || | ||| ||||||||||||||||||||||||||| | || || || ||||| | |||| | ||||||| |||||| |||||||| |||||| |
|
|
| T |
24619211 |
cgatctttcaaaagtcctcttccttatcctcccccaagtccatgcatgacacctgtacaatgacatgagatgttctttgattttcaccaatatcgataaa |
24619310 |
T |
|
| Q |
357 |
gaagtcgtcaagttttgccttcaactcgtccaactt |
392 |
Q |
| |
|
| | || || || ||||||||||| ||||||||| |
|
|
| T |
24619311 |
gtatcagttaacttgtgccttcaacttgtccaactt |
24619346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 82 - 291
Target Start/End: Original strand, 4472726 - 4472935
Alignment:
| Q |
82 |
aattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgta |
181 |
Q |
| |
|
||||||||||||| || || || | ||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||| ||||| |||| ||||||||| |
|
|
| T |
4472726 |
aattcattaaaatgcatcattatgaacacaaattt-gaacacattacactattacacgttaataaatattacacttcaatggatcagacacaaagatgta |
4472824 |
T |
|
| Q |
182 |
aaaggttattttcaaccatcacacgaaacatgtaatcaacgtcactatcatctttgactagttgtggaaaatacacggtcctccaacggtc-ctcttcct |
280 |
Q |
| |
|
||| ||||||||||||||| | || |||||| ||||||||||| | ||||| || | ||||||||||||||||||| ||||| ||| || |||| |
|
|
| T |
4472825 |
aaatgttattttcaaccattaaactaaacatctaatcaacgtcgccgtcatcgaggataacttgtggaaaatacacggtcttccaattgtctttcatcct |
4472924 |
T |
|
| Q |
281 |
tatcctccccc |
291 |
Q |
| |
|
||||||||||| |
|
|
| T |
4472925 |
tatcctccccc |
4472935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 152
Target Start/End: Original strand, 24618817 - 24618958
Alignment:
| Q |
11 |
tttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacata-aacacgaattcattaaaattcaacaatacggaca |
109 |
Q |
| |
|
|||| ||||| |||||||| |||||||||| || |||||| ||| ||| ||||||||||||| | ||||| ||||||||||||||||||| ||| |||| |
|
|
| T |
24618817 |
tttccaaaatcacataatcacacataaacgatccaaattacacaaattcgtcgttaaattacacataacacaaattcattaaaattcaacattacagaca |
24618916 |
T |
|
| Q |
110 |
caaattcagaaaacattacactattacacattaataaatatta |
152 |
Q |
| |
|
||||||| ||| ||||||||||||||||| ||||| ||||||| |
|
|
| T |
24618917 |
caaattc-gaacacattacactattacacgttaatgaatatta |
24618958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 22675526 - 22675432
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaattacataaacacgaattcattaaaattcaacaa |
101 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||| ||||||| |
|
|
| T |
22675526 |
tccataaatttctaaaattacataatatcacataaacggtcaaaattacccaaattcatcgttaaat----taaacacaaattcattaaaaatcaacaa |
22675432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 268
Target Start/End: Complemental strand, 29671372 - 29671226
Alignment:
| Q |
122 |
acattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatcaac |
221 |
Q |
| |
|
|||||||||||||| || |||||| |||||| ||||||| ||||| |||||||||||||||| ||||||| |||||| | | ||| |||||||| | |
|
|
| T |
29671372 |
acattacactattatacgttaatatatattacacttcaatggatcaaacataaagatgtaaaaatttatttttaaccattaacctaaaaatgtaatcgat |
29671273 |
T |
|
| Q |
222 |
gtcactatcatctttgactagttgtggaaaatacacggtcctccaac |
268 |
Q |
| |
|
|| | |||||| | || | ||||||||||||||||||| |||||| |
|
|
| T |
29671272 |
gttgccatcatcatggataacttgtggaaaatacacggtcttccaac |
29671226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 27187702 - 27187816
Alignment:
| Q |
82 |
aattcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgta |
181 |
Q |
| |
|
||||||||||||| |||| | || ||||||| ||| || ||||||||||| ||||| |||| ||||||||||| || |||||| ||||||||| ||| |
|
|
| T |
27187702 |
aattcattaaaatgtaacattgcgaacacaaagtca-aacacattacactactacacgttaa---atattagactttaatggatcgaacataaagacgta |
27187797 |
T |
|
| Q |
182 |
aaaggttattttcaaccat |
200 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
27187798 |
aaatgttattttcaaccat |
27187816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 32076502 - 32076438
Alignment:
| Q |
71 |
acataaacacgaattcattaaaattcaacaatacggacacaaattcagaaaacattacactattac |
136 |
Q |
| |
|
|||||||||| |||||||| | |||||||| |||||||||||||||| || |||||| |||||||| |
|
|
| T |
32076502 |
acataaacacaaattcatttatattcaacattacggacacaaattca-aacacattagactattac |
32076438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 41601245 - 41601202
Alignment:
| Q |
3 |
tccataactttctaaaattacataatctcacataaacggtcaaa |
46 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||||| |||||| |
|
|
| T |
41601245 |
tccataaatttctaaaattatataatctcacataaacagtcaaa |
41601202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 44015537 - 44015608
Alignment:
| Q |
147 |
atattagacttcaacggatcggacataaagatgtaaaaggttattttcaaccatcacacgaaacatgtaatc |
218 |
Q |
| |
|
|||||| |||||| ||| |||||| |||||||||||| |||||||||||||||| | |||||||||||| |
|
|
| T |
44015537 |
atattacacttcagtggaccggacacaaagatgtaaaattttattttcaaccatcaacctaaacatgtaatc |
44015608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 45686 - 45819
Alignment:
| Q |
84 |
ttcattaaaattcaacaatacggacacaaattcagaaaacattacactattacacattaataaatattagacttcaacggatcggacataaagatgtaaa |
183 |
Q |
| |
|
|||||| |||| ||| | || |||||||||||| ||| | ||||||||||||||| | |||| |||||| ||||||| ||| |||||| ||||||||||| |
|
|
| T |
45686 |
ttcattcaaatgcaatattatggacacaaattc-gaacatattacactattacacgtcaatacatattacacttcaatggagcggacacaaagatgtaaa |
45784 |
T |
|
| Q |
184 |
aggttattttcaaccatcacacgaaacatgtaatc |
218 |
Q |
| |
|
| ||||||||||||||| | | |||||||||||| |
|
|
| T |
45785 |
atgttattttcaaccattaacctaaacatgtaatc |
45819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0700 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0700
Description:
Target: scaffold0700; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 4590 - 4536
Alignment:
| Q |
15 |
taaaattacataatctcacataaacggtcaaaattatccaacttcatcgttaaat |
69 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| || ||||||||||||| |
|
|
| T |
4590 |
taaaattacataatctcacataaacagtcaaaattacagaaattcatcgttaaat |
4536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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