View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20321_low_71 (Length: 285)

Name: NF20321_low_71
Description: NF20321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20321_low_71
NF20321_low_71
[»] chr3 (44 HSPs)
chr3 (1-119)||(37203056-37203174)
chr3 (2-119)||(37157697-37157813)
chr3 (1-115)||(46297831-46297945)
chr3 (1-118)||(4015450-4015567)
chr3 (5-114)||(22446138-22446247)
chr3 (1-120)||(51213050-51213169)
chr3 (1-117)||(3655271-3655387)
chr3 (1-117)||(26941329-26941445)
chr3 (1-117)||(35844317-35844433)
chr3 (1-117)||(40552328-40552444)
chr3 (1-123)||(11466809-11466931)
chr3 (2-102)||(11357434-11357535)
chr3 (1-117)||(21193597-21193713)
chr3 (1-117)||(22450959-22451075)
chr3 (1-117)||(34132926-34133042)
chr3 (3-117)||(39282644-39282757)
chr3 (3-117)||(48354932-48355046)
chr3 (5-120)||(3362240-3362356)
chr3 (1-107)||(29099356-29099462)
chr3 (7-117)||(47481513-47481623)
chr3 (1-117)||(44186570-44186686)
chr3 (2-117)||(52040992-52041108)
chr3 (49-117)||(55343401-55343469)
chr3 (3-118)||(20373367-20373482)
chr3 (1-117)||(7327551-7327668)
chr3 (29-118)||(44891497-44891585)
chr3 (70-118)||(49359629-49359677)
chr3 (1-117)||(4761718-4761836)
chr3 (4-91)||(54505825-54505912)
chr3 (2-115)||(53229222-53229336)
chr3 (5-94)||(2007948-2008036)
chr3 (31-118)||(2613883-2613967)
chr3 (63-116)||(11835737-11835790)
chr3 (1-118)||(27480448-27480565)
chr3 (6-114)||(32373466-32373572)
chr3 (1-102)||(40935997-40936098)
chr3 (4-68)||(21009874-21009938)
chr3 (70-118)||(53811977-53812025)
chr3 (70-117)||(40640635-40640682)
chr3 (70-117)||(47930667-47930714)
chr3 (24-115)||(43975980-43976068)
chr3 (82-114)||(4556543-4556575)
chr3 (70-114)||(38392629-38392673)
chr3 (70-118)||(42204341-42204389)
[»] chr8 (41 HSPs)
chr8 (1-118)||(6098593-6098710)
chr8 (2-117)||(34894966-34895081)
chr8 (1-117)||(16446950-16447066)
chr8 (1-117)||(36695041-36695157)
chr8 (4-111)||(37970597-37970704)
chr8 (2-117)||(38643977-38644092)
chr8 (1-119)||(5300021-5300139)
chr8 (1-117)||(27082913-27083029)
chr8 (1-120)||(13307619-13307738)
chr8 (1-115)||(465843-465957)
chr8 (5-119)||(10555281-10555395)
chr8 (1-119)||(12876106-12876224)
chr8 (1-117)||(9864147-9864263)
chr8 (1-117)||(34952106-34952222)
chr8 (2-117)||(1150181-1150296)
chr8 (4-117)||(41362517-41362627)
chr8 (1-118)||(23854506-23854623)
chr8 (24-117)||(43643693-43643786)
chr8 (1-117)||(1204926-1205042)
chr8 (4-117)||(8803888-8803997)
chr8 (2-117)||(40862418-40862534)
chr8 (1-102)||(11727038-11727139)
chr8 (4-117)||(30654661-30654774)
chr8 (52-119)||(15009239-15009306)
chr8 (1-118)||(4133085-4133200)
chr8 (50-115)||(7891072-7891137)
chr8 (1-117)||(16222862-16222978)
chr8 (2-116)||(31933962-31934076)
chr8 (70-111)||(23176764-23176805)
chr8 (70-117)||(4108913-4108960)
chr8 (27-118)||(33906222-33906313)
chr8 (70-117)||(38110353-38110400)
chr8 (53-119)||(33197889-33197955)
chr8 (75-117)||(39099258-39099300)
chr8 (34-120)||(41911097-41911182)
chr8 (70-115)||(35735985-35736030)
chr8 (70-114)||(5018013-5018057)
chr8 (72-120)||(6446709-6446757)
chr8 (70-110)||(8151413-8151453)
chr8 (53-117)||(24823399-24823463)
chr8 (80-116)||(35459852-35459888)
[»] chr5 (52 HSPs)
chr5 (1-117)||(5112372-5112488)
chr5 (2-117)||(1429205-1429320)
chr5 (3-118)||(23116283-23116398)
chr5 (1-120)||(36866759-36866878)
chr5 (24-117)||(12910350-12910443)
chr5 (5-120)||(7693227-7693342)
chr5 (2-115)||(699152-699265)
chr5 (1-123)||(40133379-40133501)
chr5 (1-117)||(19119859-19119975)
chr5 (32-120)||(26317774-26317862)
chr5 (2-118)||(35511537-35511653)
chr5 (1-116)||(32563150-32563265)
chr5 (2-117)||(38528296-38528411)
chr5 (24-117)||(13956427-13956520)
chr5 (2-117)||(8741946-8742062)
chr5 (1-117)||(35826542-35826658)
chr5 (1-117)||(36860423-36860539)
chr5 (27-118)||(15724489-15724580)
chr5 (1-115)||(25500985-25501099)
chr5 (1-117)||(9200233-9200349)
chr5 (2-118)||(14409386-14409502)
chr5 (1-117)||(24886102-24886220)
chr5 (1-116)||(31705670-31705785)
chr5 (2-115)||(5837557-5837670)
chr5 (24-117)||(22974164-22974257)
chr5 (5-118)||(31786709-31786822)
chr5 (5-117)||(8466745-8466856)
chr5 (3-117)||(22255181-22255296)
chr5 (1-123)||(22019626-22019748)
chr5 (1-117)||(14919587-14919704)
chr5 (1-102)||(33908248-33908349)
chr5 (2-117)||(27330306-27330419)
chr5 (5-77)||(28416590-28416662)
chr5 (3-123)||(39572813-39572933)
chr5 (1-108)||(43308711-43308818)
chr5 (1-116)||(22980794-22980909)
chr5 (1-115)||(26268076-26268190)
chr5 (31-117)||(35933902-35933988)
chr5 (1-102)||(8436981-8437082)
chr5 (7-115)||(27318552-27318660)
chr5 (70-117)||(22616494-22616541)
chr5 (70-116)||(21320752-21320798)
chr5 (1-102)||(30969383-30969484)
chr5 (51-118)||(16004485-16004553)
chr5 (6-117)||(17158094-17158208)
chr5 (1-77)||(25668690-25668765)
chr5 (1-119)||(21088825-21088943)
chr5 (33-84)||(22255608-22255659)
chr5 (70-124)||(5829890-5829944)
chr5 (3-56)||(23954850-23954904)
chr5 (70-102)||(5748443-5748475)
chr5 (72-120)||(26411290-26411338)
[»] chr1 (54 HSPs)
chr1 (5-118)||(42721034-42721147)
chr1 (1-115)||(15752027-15752141)
chr1 (1-117)||(2959744-2959860)
chr1 (1-117)||(10182072-10182188)
chr1 (2-117)||(34012442-34012557)
chr1 (1-115)||(41926161-41926275)
chr1 (1-117)||(18422647-18422763)
chr1 (3-117)||(1547283-1547397)
chr1 (5-98)||(9903122-9903215)
chr1 (119-216)||(10562165-10562264)
chr1 (5-117)||(19899837-19899949)
chr1 (24-117)||(30254854-30254946)
chr1 (2-117)||(15382929-15383044)
chr1 (4-117)||(16415641-16415755)
chr1 (1-107)||(28564845-28564951)
chr1 (5-118)||(3309143-3309255)
chr1 (1-117)||(21289661-21289784)
chr1 (4-121)||(23999339-23999456)
chr1 (3-115)||(27563971-27564084)
chr1 (3-117)||(37618960-37619076)
chr1 (5-118)||(38823209-38823322)
chr1 (1-117)||(11742414-11742530)
chr1 (5-117)||(32267030-32267142)
chr1 (1-117)||(48620633-48620749)
chr1 (2-124)||(30327017-30327139)
chr1 (1-102)||(47279200-47279301)
chr1 (5-116)||(10922724-10922835)
chr1 (1-116)||(14758038-14758153)
chr1 (1-131)||(30254405-30254535)
chr1 (31-121)||(7079168-7079258)
chr1 (1-107)||(37451292-37451398)
chr1 (2-102)||(27267264-27267362)
chr1 (53-117)||(22170750-22170814)
chr1 (5-101)||(27533048-27533144)
chr1 (1-77)||(32216091-32216167)
chr1 (5-119)||(47682562-47682675)
chr1 (1-115)||(238577-238690)
chr1 (2-102)||(4330290-4330392)
chr1 (1-115)||(28769651-28769764)
chr1 (7-117)||(39393379-39393489)
chr1 (36-117)||(8222127-8222208)
chr1 (1-118)||(27227549-27227658)
chr1 (72-127)||(47279149-47279204)
chr1 (1-119)||(31621617-31621735)
chr1 (24-117)||(15168085-15168178)
chr1 (4-77)||(46931447-46931520)
chr1 (1-77)||(40884849-40884925)
chr1 (70-117)||(13876920-13876967)
chr1 (70-132)||(27118315-27118377)
chr1 (2-88)||(51128884-51128970)
chr1 (72-117)||(4150490-4150535)
chr1 (1-77)||(3534968-3535044)
chr1 (70-114)||(42663786-42663830)
chr1 (82-118)||(43579241-43579277)
[»] chr4 (51 HSPs)
chr4 (1-115)||(36493783-36493897)
chr4 (1-115)||(34948192-34948306)
chr4 (7-117)||(35021136-35021246)
chr4 (6-116)||(37775670-37775780)
chr4 (24-117)||(4205116-4205209)
chr4 (4-117)||(34361589-34361702)
chr4 (1-118)||(55241199-55241316)
chr4 (1-117)||(19089548-19089664)
chr4 (1-117)||(25701152-25701268)
chr4 (1-117)||(38011854-38011970)
chr4 (1-118)||(19440743-19440861)
chr4 (1-115)||(47253751-47253864)
chr4 (4-117)||(32912678-32912791)
chr4 (5-117)||(37287733-37287846)
chr4 (2-118)||(49375965-49376082)
chr4 (5-121)||(17167709-17167825)
chr4 (5-121)||(17173286-17173402)
chr4 (2-118)||(39397917-39398033)
chr4 (1-116)||(4597994-4598108)
chr4 (1-119)||(7703515-7703633)
chr4 (24-117)||(25184113-25184206)
chr4 (1-117)||(37663836-37663950)
chr4 (2-118)||(28003082-28003198)
chr4 (32-120)||(53124284-53124372)
chr4 (25-117)||(55478014-55478106)
chr4 (2-117)||(30002720-30002835)
chr4 (1-114)||(6864038-6864151)
chr4 (5-117)||(9139247-9139357)
chr4 (1-102)||(46888252-46888353)
chr4 (25-117)||(4396326-4396418)
chr4 (2-117)||(29584296-29584409)
chr4 (1-117)||(35025683-35025799)
chr4 (1-102)||(32592108-32592209)
chr4 (1-115)||(33341397-33341515)
chr4 (35-117)||(7152235-7152317)
chr4 (5-102)||(50764747-50764842)
chr4 (7-115)||(27396618-27396726)
chr4 (5-117)||(50697242-50697354)
chr4 (2-117)||(3042611-3042726)
chr4 (1-100)||(23761089-23761188)
chr4 (53-117)||(17272011-17272075)
chr4 (70-117)||(2704512-2704559)
chr4 (70-117)||(38812261-38812308)
chr4 (70-117)||(47073658-47073705)
chr4 (24-91)||(54499357-54499424)
chr4 (70-116)||(51204580-51204626)
chr4 (70-119)||(17612333-17612382)
chr4 (70-115)||(20097492-20097537)
chr4 (3-76)||(23518400-23518473)
chr4 (70-123)||(46884198-46884251)
chr4 (70-118)||(38811812-38811860)
[»] chr7 (43 HSPs)
chr7 (1-117)||(32821123-32821239)
chr7 (1-119)||(37346995-37347113)
chr7 (2-118)||(5657552-5657668)
chr7 (1-117)||(31520793-31520909)
chr7 (2-120)||(37109844-37109962)
chr7 (6-115)||(44413454-44413564)
chr7 (3-115)||(11071182-11071295)
chr7 (1-118)||(27283718-27283835)
chr7 (4-116)||(24211717-24211829)
chr7 (1-117)||(22687217-22687330)
chr7 (1-118)||(8861259-8861376)
chr7 (1-122)||(43686011-43686131)
chr7 (2-117)||(17842657-17842772)
chr7 (1-119)||(4582892-4583010)
chr7 (3-117)||(7334769-7334883)
chr7 (1-119)||(12165725-12165843)
chr7 (5-115)||(23111167-23111277)
chr7 (1-117)||(30055501-30055618)
chr7 (1-117)||(21991611-21991727)
chr7 (1-117)||(26524397-26524513)
chr7 (1-115)||(27421449-27421563)
chr7 (5-117)||(18797304-18797414)
chr7 (1-117)||(41765148-41765264)
chr7 (1-116)||(48928633-48928748)
chr7 (1-119)||(15612829-15612946)
chr7 (27-117)||(31579165-31579255)
chr7 (5-116)||(38258521-38258632)
chr7 (7-117)||(9355902-9356012)
chr7 (7-117)||(12390706-12390816)
chr7 (3-115)||(25691616-25691729)
chr7 (1-90)||(26980325-26980414)
chr7 (1-101)||(48928366-48928466)
chr7 (2-117)||(32432432-32432542)
chr7 (11-118)||(34362228-34362335)
chr7 (72-117)||(241024-241069)
chr7 (50-115)||(8299192-8299257)
chr7 (2-117)||(10481578-10481695)
chr7 (7-119)||(6546492-6546604)
chr7 (70-118)||(23402372-23402420)
chr7 (2-116)||(33688333-33688446)
chr7 (2-118)||(10359285-10359401)
chr7 (1-91)||(29173541-29173631)
chr7 (74-114)||(10675337-10675377)
[»] chr2 (39 HSPs)
chr2 (3-119)||(26357575-26357691)
chr2 (2-117)||(29242226-29242341)
chr2 (1-117)||(4166922-4167038)
chr2 (3-119)||(4763626-4763745)
chr2 (6-118)||(33551078-33551190)
chr2 (1-115)||(33660455-33660569)
chr2 (1-115)||(43770926-43771039)
chr2 (2-126)||(4264165-4264289)
chr2 (7-117)||(19289416-19289521)
chr2 (1-117)||(27350025-27350142)
chr2 (1-116)||(13711465-13711580)
chr2 (1-118)||(4478367-4478485)
chr2 (24-118)||(35958908-35959002)
chr2 (1-115)||(36641988-36642102)
chr2 (1-119)||(37905707-37905824)
chr2 (5-115)||(41463941-41464051)
chr2 (32-117)||(18494386-18494471)
chr2 (1-117)||(2325457-2325573)
chr2 (1-117)||(39167450-39167566)
chr2 (53-117)||(41960883-41960947)
chr2 (1-115)||(3176941-3177055)
chr2 (4-122)||(11366471-11366589)
chr2 (24-117)||(17054206-17054299)
chr2 (1-118)||(19313851-19313968)
chr2 (54-119)||(41465507-41465572)
chr2 (6-117)||(17071829-17071940)
chr2 (1-118)||(33902067-33902182)
chr2 (2-84)||(43648333-43648415)
chr2 (1-117)||(31570821-31570937)
chr2 (31-119)||(44913660-44913747)
chr2 (70-121)||(31861891-31861942)
chr2 (70-117)||(34441922-34441969)
chr2 (70-116)||(42005390-42005436)
chr2 (70-115)||(41643874-41643919)
chr2 (70-118)||(18514772-18514820)
chr2 (70-102)||(27139021-27139053)
chr2 (70-117)||(6177775-6177822)
chr2 (70-117)||(43446463-43446510)
chr2 (1-77)||(33709319-33709395)
[»] chr6 (17 HSPs)
chr6 (5-117)||(4318895-4319007)
chr6 (1-117)||(8513233-8513349)
chr6 (4-117)||(5627391-5627504)
chr6 (4-117)||(1945833-1945947)
chr6 (2-120)||(6088905-6089023)
chr6 (2-115)||(29182165-29182278)
chr6 (2-118)||(7235103-7235219)
chr6 (4-117)||(7055286-7055399)
chr6 (1-117)||(18498433-18498550)
chr6 (5-117)||(3880011-3880123)
chr6 (1-121)||(33893070-33893190)
chr6 (1-116)||(20768087-20768200)
chr6 (1-115)||(21017180-21017294)
chr6 (2-115)||(30353427-30353540)
chr6 (70-116)||(3005394-3005440)
chr6 (4-101)||(15491631-15491728)
chr6 (3-114)||(6091253-6091363)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-115)||(7889-8003)
[»] scaffold0002 (3 HSPs)
scaffold0002 (7-96)||(94458-94547)
scaffold0002 (1-117)||(134-250)
scaffold0002 (65-117)||(408702-408754)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-115)||(43959-44073)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-115)||(154714-154828)
[»] scaffold0009 (2 HSPs)
scaffold0009 (52-117)||(100821-100886)
scaffold0009 (26-117)||(42348-42439)
[»] scaffold0008 (1 HSPs)
scaffold0008 (2-117)||(267282-267399)
[»] scaffold0022 (1 HSPs)
scaffold0022 (4-115)||(146088-146199)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-115)||(11908-12025)


Alignment Details
Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37203174 - 37203056
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||||| | |||||||| ||||||| |||||||||||||||| ||||||| ||||||    
T  37203174 ggactgaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaaatcatttttatgact 37203075  T
Q  101 tcgccatagaattttccaa 119  Q
    || ||||||||||||||||    
T  37203074 tcaccatagaattttccaa 37203056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 37157813 - 37157697
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| |||||| | |||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  37157813 gactgaacttttgatgccactgtacaa-cagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaagccattttcatgactt 37157715  T
Q  102 cgccatagaattttccaa 119  Q
    | ||||||||||||||||    
T  37157714 caccatagaattttccaa 37157697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 46297831 - 46297945
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||  ||| | |||||||||||| |||||| ||||||||||||||||| ||||||| |||||||| || |||||||||||||||||||    
T  46297831 ggactgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtgttaacttcaccagaaaagtcattttcatgact 46297930  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  46297931 tcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4015567 - 4015450
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  ||||||||||||||| |||||||| |||| | | |||||||| ||||||| ||||||||||| |||||||||| ||||||||    
T  4015567 ggactgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatagtgttaacttcatcagaaaagtcattctcatgact 4015468  T
Q  101 tcgccatagaattttcca 118  Q
    || |||||||||||||||    
T  4015467 tcaccatagaattttcca 4015450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 22446138 - 22446247
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatc-aaaaaagtcattttcatgacttcg 103  Q
    |||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||||| || |||||||| | |||||||||||||||||||||||     
T  22446138 tgaacttttgatgccactgtacaaa-agtggggtgttactcactatatttttgatgatataatgttaacttcaccaaaaaaagtcattttcatgacttca 22446236  T
Q  104 ccatagaattt 114  Q
    || ||||||||    
T  22446237 ccgtagaattt 22446247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 51213050 - 51213169
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| |||||||||| ||| | ||||||||||||||||||  ||| || |||||| ||| || |||| |||||||| ||||||||||||| ||||||||    
T  51213050 ggactcaacttttgatgccattgtacaaacagtggggtgttgctcattacattttttatgttacagtgttaacttcaccaaaaaagtcattctcatgact 51213149  T
Q  101 tcgccatagaattttccaat 120  Q
    || |||||||||||||||||    
T  51213150 tcaccatagaattttccaat 51213169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3655271 - 3655387
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||| ||||||||||| ||| || |||||| ||| ||||||| |||||| ||||||||||||||||| ||||||    
T  3655271 ggactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaactttatcaaaaaagtcatttttatgact 3655370  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||| ||||||||    
T  3655371 tcaccataaaattttcc 3655387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 26941329 - 26941445
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||||||||||| ||| |||| |||||||  ||||||| |||||||| ||||||| ||||| | ||||||    
T  26941329 ggactgaacttttgatgtcattatacaaacagtggggtgttactcattataattttgattttatagtgttaacttcaccaaaaaaatcattcttatgact 26941428  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  26941429 tcaccatagaattttcc 26941445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35844433 - 35844317
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| ||||||||||  |||| ||||||||||| ||||||| |||| | ||||||| || ||||||| |||||||| || |||||||||| ||||||||    
T  35844433 ggactaaacttttgatgtcactgtacaaacagtgaggtgttactcacaacatttttgttgttatagtgttaacttcaccagaaaagtcattatcatgact 35844334  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  35844333 tcaccatagaattttcc 35844317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40552328 - 40552444
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||| |||| |||||| ||| || |||||||||| ||||||| |||||||  ||||||||||||| ||||||||    
T  40552328 ggactgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatagtgttaacttctccaaaaaagtcattctcatgact 40552427  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  40552428 tcaccatagaattttcc 40552444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 11466931 - 11466809
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| |||| | | ||  |||| ||||||  ||||||||||| |||||||||| ||| ||||    
T  11466931 ggactaaacttttgatgccactgtacaaacagtggggtgttactcacaacacttgcgatgttatagtcttaacttcatcagaaaagtcattctcaagact 11466832  T
Q  101 tcgccatagaattttccaataat 123  Q
    || |||||||||||||| |||||    
T  11466831 tcaccatagaattttcctataat 11466809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 11357434 - 11357535
Alignment:
Q  2 gactgaacttttgattccactctacaaacagt-ggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||| | ||| |||||||||| ||||||||| |||||||| |||||||| ||||||| |||||||| || |||||||||| ||||||||    
T  11357434 gactgaacttttgatgcaactgtacaaacagtgggggtgttactcactatacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgact 11357533  T
Q  101 tc 102  Q
    ||    
T  11357534 tc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21193713 - 21193597
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||| | | |||||||   | |||| |||||||| || |||||||||| ||||||||    
T  21193713 ggactgaacttttgatgtcactctacaaacagtggggtgttactcacaacacttttgattcaacagtgttaacttcaccagaaaagtcattctcatgact 21193614  T
Q  101 tcgccatagaattttcc 117  Q
    |  ||||||||||||||    
T  21193613 ttaccatagaattttcc 21193597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22451075 - 22450959
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||  ||||||||||| |||| || |||||| | |||||||| ||||||| | |||||| || |||| ||||| ||||||||    
T  22451075 ggactgaacttttgatgccaccatacaaacagtgaggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcattctcatgact 22450976  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  22450975 tcaccatagaattttcc 22450959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 34133042 - 34132926
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||||||||||| |||| | |||||||||  ||||||| ||| |||| |||||||||||||||| |||||    
T  34133042 ggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcgtgact 34132943  T
Q  101 tcgccatagaattttcc 117  Q
    ||   ||||||||||||    
T  34132942 tcattatagaattttcc 34132926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 39282757 - 39282644
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    |||||||||||||| ||||| || |||||||||||| ||| |||| | | |||||||| ||||||| ||| || |||| |||| ||||||||||||||||    
T  39282757 actgaacttttgatgccactgtataaacagtggggtattactcac-acagttttgatgttatagtgttaattttatcagaaaaatcattttcatgacttc 39282659  T
Q  103 gccatagaattttcc 117  Q
     ||||||||||||||    
T  39282658 accatagaattttcc 39282644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 48355046 - 48354932
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    |||||||||||||| ||| | |||||||| |||||||||| ||| || |||||| ||  ||||||| |||||||| || |||| ||||| ||||||||||    
T  48355046 actgaacttttgatgccattgtacaaacaatggggtgttactcattacatttttaatattatagtgttaacttcaccataaaaatcattctcatgacttc 48354947  T
Q  103 gccatagaattttcc 117  Q
     ||||||||||||||    
T  48354946 accatagaattttcc 48354932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 3362356 - 3362240
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatc-aaaaaagtcattttcatgacttcg 103  Q
    |||||||||||| ||||| |||||| |||||| ||||| ||||||||||| ||||| ||||||| |||||||| | |||||||| |||||||| | |||     
T  3362356 tgaacttttgatgccactgtacaaatagtgggatgttactcactatatttctgatgctatagtgttaacttcaccaaaaaaagttattttcataatttca 3362257  T
Q  104 ccatagaattttccaat 120  Q
    || ||||| ||||||||    
T  3362256 ccgtagaactttccaat 3362240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29099462 - 29099356
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||| |||  |||| ||||||||||||||||||| |||| | |||||| ||| ||||||| |||||||| || |||||||||| | ||||||    
T  29099462 ggactgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatagtgttaacttcaccagaaaagtcattctaatgact 29099363  T
Q  101 tcgccat 107  Q
    || ||||    
T  29099362 tcaccat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 47481623 - 47481513
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcca 106  Q
    ||||||||||  || ||||||||||||||||||||| ||| || |||||||||| ||||||| |||||||| ||||||  |||||   |||||||| |||    
T  47481623 aacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaacatcattcctatgacttcacca 47481524  T
Q  107 tagaattttcc 117  Q
    || ||||||||    
T  47481523 taaaattttcc 47481513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 44186570 - 44186686
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| || |||||| ||||||||| |||| | | |||||||| ||||||| |||||||| ||||||| ||||| ||  ||||    
T  44186570 ggactgaacttttgatgtcactgtataaacagcggggtgttactcacaacacttttgatgctatagtgttaacttcaccaaaaaaatcattctctcgact 44186669  T
Q  101 tcgccatagaattttcc 117  Q
    ||  |||||||||||||    
T  44186670 tcatcatagaattttcc 44186686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 52040992 - 52041108
Alignment:
Q  2 gactgaacttttgattccactctacaaaca-gtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||| ||||| ||||||||  ||||| |||| |||||| | |||||||| ||||||  |||||||| || |||||||||| ||||||||    
T  52040992 gactgaacttttgatgccactatacaaacatttggggagttactcactacacttttgatgttatagtattaacttcaccagaaaagtcattctcatgact 52041091  T
Q  101 tcgccatagaattttcc 117  Q
    || ||  ||||||||||    
T  52041092 tcacctcagaattttcc 52041108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 117
Target Start/End: Original strand, 55343401 - 55343469
Alignment:
Q  49 atatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||||||  ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  55343401 atatttttgatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaattttcc 55343469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 20373367 - 20373482
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    ||||||||||||||  || | ||||||||||||||||||| ||  || |||||||||| ||||||  |||||||| ||||||| ||||| | ||||||||    
T  20373367 actgaacttttgatgtcattgtacaaacagtggggtgttactcgttacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgacttc 20373466  T
Q  103 gccatagaattttcca 118  Q
     | ||| |||||||||    
T  20373467 actataaaattttcca 20373482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7327551 - 7327668
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgct-aacttcatcaaaaaagtcattttcatgac 99  Q
    ||||||||||||||||  |||| |||||| | ||| |||||| |||| | | |||||||| ||||||| | |||||||  |||||||||||| |||| ||    
T  7327551 ggactgaacttttgatgtcactgtacaaataatggagtgttactcacaacacttttgatgttatagtgtttaacttcactaaaaaagtcattctcataac 7327650  T
Q  100 ttcgccatagaattttcc 117  Q
    ||| ||||||||||||||    
T  7327651 ttcaccatagaattttcc 7327668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 44891585 - 44891497
Alignment:
Q  29 acagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    |||||||| ||||| |||| | | |||||||| ||||||| |||||||| |||||| ||||||||||||||||| || || |||||||||    
T  44891585 acagtgggatgttactcacaacacttttgatgttatagtgttaacttcaccaaaaa-gtcattttcatgacttcaccgtataattttcca 44891497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 49359629 - 49359677
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  49359629 taacttcacaaaaaaagtcattttcatgacttcaccatagaattttcca 49359677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4761718 - 4761836
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatc--aaaaaagtcattttcatga 98  Q
    ||||||||||||||||  || | |||||||||||  |||||| ||| || |||||||||  ||||||  |||||||| |  |||||||||| | ||||||    
T  4761718 ggactgaacttttgatgtcattgtacaaacagtgaagtgttactcattacatttttgatattatagtattaacttcaccaaaaaaaagtcaatctcatga 4761817  T
Q  99 cttcgccatagaattttcc 117  Q
     ||| ||||||||||||||    
T  4761818 attcaccatagaattttcc 4761836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 54505912 - 54505825
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcatt 91  Q
    ||||| |||||||  || |||| ||| | |||||||||| ||| || |||||||||| ||||||| |||||||| |||||||||||||    
T  54505912 ctgaatttttgatgtcattctataaataatggggtgttactcattacatttttgatgttatagtgttaacttcaacaaaaaagtcatt 54505825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 53229222 - 53229336
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtg-gggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||| | ||| |||||||| || |||||||  |||||| | |||||||| ||||||| ||| |||| || |||| | ||||||||||||    
T  53229222 gactgaacttttgatgcaactgtacaaacattgagggtgttgctcactacacttttgatgctatagtgttaatttcaccagaaaaataattttcatgact 53229321  T
Q  101 tcgccatagaatttt 115  Q
    || || || ||||||    
T  53229322 tcaccttaaaatttt 53229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 2008036 - 2007948
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttc 94  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| | | |||| | | ||||||| ||||||||  |||||| ||||||||    
T  2008036 tgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttaacgctatagtgttaacttca-aaaaaaaatcattttc 2007948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 2613967 - 2613883
Alignment:
Q  31 agtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    |||| ||||||| |||| | | ||||| || ||||||| |||||||| ||||||||||||||| |||||||   ||||||||||||||    
T  2613967 agtgtggtgttactcacaacacttttggtgttatagtgttaacttcaacaaaaaagtcattttaatgactt---catagaattttcca 2613883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 11835737 - 11835790
Alignment:
Q  63 atagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttc 116  Q
    |||||| |||||||| ||||||| ||||| |||||||||| |||||||||||||    
T  11835737 atagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 11835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27480448 - 27480565
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||  |||||||| | || || || ||| |||| |||||||| ||||||| | |||| | ||||||  ||||| ||||||||    
T  27480448 ggactgaacttttgatgtcaccgtacaaacaattggatgctactcattatacttttgatgttatagtgttgactttaccaaaaatatcattctcatgact 27480547  T
Q  101 tcgccatagaattttcca 118  Q
    ||  ||||||||||||||    
T  27480548 tcatcatagaattttcca 27480565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 114
Target Start/End: Complemental strand, 32373572 - 32373466
Alignment:
Q  6 gaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcc 105  Q
    ||||||||||| ||||| ||||||||||  || |||| |||| | | |||||||| ||||||| |||||| ||   |||||||||| ||||||||||  |    
T  32373572 gaacttttgatgccactgtacaaacagt--ggagttactcacaacacttttgatgctatagtgttaactttattggaaaagtcattctcatgacttcatc 32373475  T
Q  106 atagaattt 114  Q
    |||||||||    
T  32373474 atagaattt 32373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 40936098 - 40935997
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| || ||||| || ||||||| || | | | |||||||| ||||||| |||||||| || |||| ||||| ||||||||    
T  40936098 ggactgaacttttgatgtcactgtataaacaatgaggtgttactcgcaacacttttgatgctatagtgttaacttcaccagaaaaatcattctcatgact 40935999  T
Q  101 tc 102  Q
    ||    
T  40935998 tc 40935997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 21009874 - 21009938
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtg 68  Q
    |||||||||||||  || |||||||| |||||||||||| ||| || |||||||||| |||||||    
T  21009874 ctgaacttttgatgtcattctacaaatagtggggtgttactcattacatttttgatgttatagtg 21009938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 53811977 - 53812025
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    ||||||||||| |||||||||| |||||||||| || ||||||||||||    
T  53811977 taacttcatcagaaaagtcattctcatgacttcaccgtagaattttcca 53812025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 40640635 - 40640682
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| || |||||||||| |||||||||| ||||||||||||||    
T  40640635 taacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 40640682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 47930667 - 47930714
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| || |||| |||||||||||||||| ||||||||||||||    
T  47930667 taacttcaccagaaaaatcattttcatgacttcaccatagaattttcc 47930714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 43975980 - 43976068
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaatttt 115  Q
    |||||| ||||| ||| || |||||| | |||||||| ||||||| | ||||||   ||||||||||| |||||||||| ||||| ||||||    
T  43975980 tacaaatagtggagtgctactcactacacttttgatgctatagtgttgacttca---aaaaagtcattctcatgacttcaccataaaatttt 43976068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 4556575 - 4556543
Alignment:
Q  82 aaaagtcattttcatgacttcgccatagaattt 114  Q
    ||||||||||||||||||||| |||||||||||    
T  4556575 aaaagtcattttcatgacttcaccatagaattt 4556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 38392629 - 38392673
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattt 114  Q
    |||||||| ||||||||||||| |||||||||| ||||| |||||    
T  38392629 taacttcaccaaaaaagtcattctcatgacttcaccatataattt 38392673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 42204389 - 42204341
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    ||||||||||| |||||||||| ||| |||||| | |||||||||||||    
T  42204389 taacttcatcagaaaagtcattctcacgacttcacgatagaattttcca 42204341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 6098593 - 6098710
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||| ||||||  |||||||| ||||||||| ||||||||||||    
T  6098593 ggactgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctatagtattaacttcaccaaaaaagttattttcatgact 6098692  T
Q  101 tcgccatagaattttcca 118  Q
    || |||||||||||||||    
T  6098693 tcaccatagaattttcca 6098710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 34895081 - 34894966
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| ||||| |||||||||||| |||||| |||||| | | |||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  34895081 gactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcagaaaagtcattttcatgactt 34894982  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  34894981 caccatagaattttcc 34894966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16446950 - 16447066
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| |||||||||| ||| | ||||||||||||||||||| |||||| | |||||||| ||||||| |||||| |||| |||||||||||||||||||    
T  16446950 ggactaaacttttgatgccattatacaaacagtggggtgttactcactacaattttgatgttatagtgttaactttatcagaaaagtcattttcatgact 16447049  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  16447050 tcaccatagaattttcc 16447066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 36695041 - 36695157
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||||||||||| |||| | |||||||||  ||||||| ||||||||||| ||||||||||||| |||||    
T  36695041 ggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgact 36695140  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  36695141 tcaccatagaattttcc 36695157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 37970597 - 37970704
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  || | ||||||||||||||||||| ||| || |||||||||| ||||||| |||||||| ||||||||||||| ||||||||||     
T  37970597 ctgaacttttgatggcattgtacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttca 37970696  T
Q  104 ccatagaa 111  Q
    ||||||||    
T  37970697 ccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 38644092 - 38643977
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| |||||  |||||||||||||||||| |||| | | |||||||| ||||||| |||||| | ||||||||||||| |||||| ||    
T  38644092 gactgaacttttgatgccactagacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttgaccaaaaaagtcattctcatgattt 38643993  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  38643992 caccatagaattttcc 38643977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5300021 - 5300139
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| |||||||||| | ||| || | || | | |||||||| ||||||| ||||||||| |||||||||||| ||||||||    
T  5300021 ggactgaacttttgatgccactgtacaaacagtagagtgctacttacaacacttttgatgctatagtgttaacttcattaaaaaagtcattctcatgact 5300120  T
Q  101 tcgccatagaattttccaa 119  Q
    || ||||||||||||||||    
T  5300121 tcaccatagaattttccaa 5300139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27082913 - 27083029
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||| || |||||  |||||||||||||||||| |||||| | |||||||| ||||||| |||||||| || |||||||| | | ||||||    
T  27082913 ggactgaacttttaatgccactgcacaaacagtggggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcagtctgatgact 27083012  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  27083013 tcaccatagaattttcc 27083029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13307738 - 13307619
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| |||||| |||| ||||||| |||| | | |||||||| ||||||| |||||||| || |||| ||||| ||||||||    
T  13307738 ggactgaacttttgatgtcactgtacaaatagtgaggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaatcattctcatgact 13307639  T
Q  101 tcgccatagaattttccaat 120  Q
    || |||||||||||||||||    
T  13307638 tcaccatagaattttccaat 13307619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 465957 - 465843
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||| ||||||| ||||| ||||||||||||||||||| |||| | | |||||||| ||| ||| |||||||| || |||||||||||| ||||||    
T  465957 ggactgaatttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatcgtgttaacttcaccacaaaagtcattttaatgact 465858  T
Q  101 tcgccatagaatttt 115  Q
    || ||||| ||||||    
T  465857 tcaccataaaatttt 465843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 10555281 - 10555395
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  || | |||||||||||| |||||| ||| || |||||| ||| ||||||| |||||||| ||||||||||||| |||||||||| |    
T  10555281 tgaacttttgatgtcattgtacaaacagtggagtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 10555380  T
Q  105 catagaattttccaa 119  Q
    | |||||||||||||    
T  10555381 cgtagaattttccaa 10555395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12876224 - 12876106
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | |||||||||| |||||||| |||| | |||||| ||  ||||||| ||||||||||| ||||||||||||| |||||    
T  12876224 ggactgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatagtgttaacttcatcagaaaagtcattttcgtgact 12876125  T
Q  101 tcgccatagaattttccaa 119  Q
    |  ||||||||||||||||    
T  12876124 taaccatagaattttccaa 12876106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9864263 - 9864147
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||||||||||| |||| | |||||||||  ||||||| ||| |||| |||||||||||||||| |||||    
T  9864263 ggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcgtgact 9864164  T
Q  101 tcgccatagaattttcc 117  Q
    ||   ||||||||||||    
T  9864163 tcattatagaattttcc 9864147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 34952106 - 34952222
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| |||| | | |||||||||||||||| |||||| | || |||||||||||| ||||||    
T  34952106 ggactgaacttttgatgtcactgtacaaacagtgggctgttactcacaacacttttgatgatatagtgttaacttgaccagaaaagtcattttaatgact 34952205  T
Q  101 tcgccatagaattttcc 117  Q
    |  | ||||||||||||    
T  34952206 ttactatagaattttcc 34952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 1150181 - 1150296
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |  | ||||||||||||| ||||| ||| || |||||||||| ||||| | |||||||| ||||||||||||| | |||||||    
T  1150181 gactgaacttttgatgtcgttgtacaaacagtgggatgttactcattacatttttgatgttatagcgttaacttcaccaaaaaagtcattcttatgactt 1150280  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  1150281 caccatagaattttcc 1150296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 41362627 - 41362517
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  |||| |||||| |||||||||||| |||||| |||||| |||   ||||| |||||||| |||||||||||||||||| |||||     
T  41362627 ctgaacttttgatgtcactatacaaatagtggggtgttactcactacattttt-atg--ctagtgttaacttcaccaaaaaagtcattttcataacttca 41362531  T
Q  104 ccatagaattttcc 117  Q
    ||||||||||||||    
T  41362530 ccatagaattttcc 41362517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23854506 - 23854623
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || |  ||||||||| |||||||| ||| || |||||| ||| ||||||| |||||||| ||||||||||||| ||||||||    
T  23854506 ggactgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgact 23854605  T
Q  101 tcgccatagaattttcca 118  Q
    || || |||| |||||||    
T  23854606 tcaccgtagacttttcca 23854623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 43643693 - 43643786
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||||| | |||||| ||| || |||||||||| ||||||| |||||||| ||||| ||||||| |||||||||| ||||||||||||||    
T  43643693 tacaaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcc 43643786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1205042 - 1204926
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | |||||||||||  |||||| |||||| |||||| ||| ||||||| |||||||| || |||||||||| ||||||||    
T  1205042 ggactgaacttttgatgtcattgtacaaacagtgatgtgttactcactacattttttatgttatagtgttaacttcaccagaaaagtcattctcatgact 1204943  T
Q  101 tcgccatagaattttcc 117  Q
    || || || ||||||||    
T  1204942 tcaccgtaaaattttcc 1204926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 8803888 - 8803997
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  || |||||||| ||||| |||||| ||| || |||||||||| ||||||| |||||||| ||||||||||||    ||||||||     
T  8803888 ctgaacttttgatgtcattctacaaatagtggagtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcat----atgacttca 8803983  T
Q  104 ccatagaattttcc 117  Q
    ||||||||||||||    
T  8803984 ccatagaattttcc 8803997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 40862534 - 40862418
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactata-tttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||| | | ||||||||  ||||||| |||||||| || |||||| |||||| |||||    
T  40862534 gactgaacttttgatgccattgtacaaacagtggggtgttactcacaacattttttgatattatagtgttaacttcaccagaaaagttattttcgtgact 40862435  T
Q  101 tcgccatagaattttcc 117  Q
    || | ||||||||||||    
T  40862434 tcactatagaattttcc 40862418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11727139 - 11727038
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| |||||| |||||||||||| | || | | |||||||| ||||||| |||||||| ||||||| ||||| |||| |||    
T  11727139 ggactgaacttttgatgccactatacaaatagtggggtgttacttacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattctcataact 11727040  T
Q  101 tc 102  Q
    ||    
T  11727039 tc 11727038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 30654661 - 30654774
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  || || |||||||||||||||||| ||| || |||||| ||| ||||||| |||||||| ||||||| ||| | | ||||||||     
T  30654661 ctgaacttttgatgtcattcaacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcactcttatgacttca 30654760  T
Q  104 ccatagaattttcc 117  Q
    ||||| ||||||||    
T  30654761 ccataaaattttcc 30654774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 15009306 - 15009239
Alignment:
Q  52 tttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaa 119  Q
    ||||||||| ||||||| |||||||| ||||||||||||| | |||||||| ||||||||||||||||    
T  15009306 tttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttccaa 15009239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4133085 - 4133200
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| ||||||||||  ||| ||| ||||||| ||||| |||   ||||| |||||||| ||||||||||||| | ||||||    
T  4133085 ggactgaacttttgatgccactgtacaaacagtcaggtattactcactatcttttttatg--ctagtgttaacttcaccaaaaaagtcattctgatgact 4133182  T
Q  101 tcgccatagaattttcca 118  Q
    |  ||||| |||||||||    
T  4133183 tgaccataaaattttcca 4133200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 7891072 - 7891137
Alignment:
Q  50 tatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaatttt 115  Q
    ||||||||||| ||||||| ||||||||  |||||||||||| |||||||||| ||||||||||||    
T  7891072 tatttttgatgttatagtgttaacttcacaaaaaaagtcattctcatgacttcaccatagaatttt 7891137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16222978 - 16222862
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||| ||||||   || ||||||||||||| ||| ||||||| ||| |||| || |||||||||| |||||| |    
T  16222978 ggactgaacttttgatgtcattgtacaaactgtggggaactactcactatattttttatgttatagtgttaaattcaccagaaaagtcattctcatgatt 16222879  T
Q  101 tcgccatagaattttcc 117  Q
    || || |||||||||||    
T  16222878 tcaccgtagaattttcc 16222862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 31933962 - 31934076
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  || | || ||| |||||||||||| ||| ||||||||||||   |||||| |||||||| ||||||| ||||| |||| ||||    
T  31933962 gactgaacttttgatgtcattgtataaagagtggggtgttactcattatatttttgatatcatagtgttaacttcaccaaaaaaatcattctcataactt 31934061  T
Q  102 cgccatagaattttc 116  Q
    | |  ||||||||||    
T  31934062 cacgttagaattttc 31934076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 23176764 - 23176805
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaa 111  Q
    |||||||| |||||||||||||||||||||||| ||||||||    
T  23176764 taacttcaccaaaaaagtcattttcatgacttcaccatagaa 23176805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 4108913 - 4108960
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||| | |||||||||||||||||||||||| ||||| ||||||||    
T  4108913 taactttaccaaaaaagtcattttcatgacttcaccataaaattttcc 4108960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 33906313 - 33906222
Alignment:
Q  27 aaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    ||||||||||||| || |||||| | |||| ||  ||||||| | |||||| || |||||||||| |||| | ||| |||||||||||||||    
T  33906313 aaacagtggggtgctactcactacacttttaatactatagtgttgacttcaccagaaaagtcattctcataatttcaccatagaattttcca 33906222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 38110400 - 38110353
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    ||||||||||| |||| |||||||||||||||| ||||| ||||||||    
T  38110400 taacttcatcagaaaaatcattttcatgacttcaccataaaattttcc 38110353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Complemental strand, 33197955 - 33197889
Alignment:
Q  53 ttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaa 119  Q
    |||||||| ||||||  |||||| |||| |||| | ||| |||||||||| ||||||||||||||||    
T  33197955 ttttgatgctatagtattaacttaatcagaaaaattattctcatgacttcaccatagaattttccaa 33197889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 39099258 - 39099300
Alignment:
Q  75 tcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||| |||||||||| |||||||||| ||||||||||||||    
T  39099258 tcatcagaaaagtcattctcatgacttcaccatagaattttcc 39099300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 41911097 - 41911182
Alignment:
Q  34 ggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaat 120  Q
    ||||||||| |||| | | |||||||||||||||  |||||||| ||||||| ||| | ||||||||||  | ||||||||||||||    
T  41911097 ggggtgttactcacgacacttttgatgatatagtattaacttcaccaaaaaaatca-tatcatgacttcatcgtagaattttccaat 41911182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 35735985 - 35736030
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaatttt 115  Q
    |||||||| ||||||||||||| | |||||||| ||||||||||||    
T  35735985 taacttcaccaaaaaagtcattctaatgacttcaccatagaatttt 35736030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 5018057 - 5018013
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattt 114  Q
    ||||||||  |||||||||||| |||||||||| |||||||||||    
T  5018057 taacttcactaaaaaagtcattatcatgacttcaccatagaattt 5018013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 6446709 - 6446757
Alignment:
Q  72 acttcatcaaaaaagtcattttcatgacttcgccatagaattttccaat 120  Q
    |||||| || |||||||||| |||||||||| |||||||||||| ||||    
T  6446709 acttcaccagaaaagtcattatcatgacttcaccatagaatttttcaat 6446757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 8151413 - 8151453
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccataga 110  Q
    |||||||| |||||||||||||||||||||| | |||||||    
T  8151413 taacttcaccaaaaaagtcattttcatgactgcaccataga 8151453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 24823399 - 24823463
Alignment:
Q  53 ttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||  ||||||| |||||||| ||||||||||||| |||| ||||  |||||| |||||||    
T  24823399 ttttgatattatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtattttcc 24823463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 35459852 - 35459888
Alignment:
Q  80 aaaaaagtcattttcatgacttcgccatagaattttc 116  Q
    |||||||||||| |||||||||| |||||||||||||    
T  35459852 aaaaaagtcattctcatgacttcaccatagaattttc 35459888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 5112372 - 5112488
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| ||| ||||||  |||||||| ||||||||||||||||||||||    
T  5112372 ggactgaacttttgatgccactgtacaaacagtggggtgttactcactatattttttatgttatagtattaacttcaccaaaaaagtcattttcatgact 5112471  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||| ||||||||    
T  5112472 tcaccataaaattttcc 5112488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 1429205 - 1429320
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||| ||||||| ||| | ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||    
T  1429205 gactgaatttttgatgccagtgtacaaacagtggggtgttactcactatatttttgatgctatagtgttaacttcaccaaaagagtcattttcatgactt 1429304  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||| ||||||    
T  1429305 caccatagatttttcc 1429320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 23116283 - 23116398
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    |||||||||||||||||||| |||||||||||||||| || |||||| | |||||||| |||| || ||||||||| |||||||||||||||||||| ||    
T  23116283 actgaacttttgattccactgtacaaacagtggggtgctactcactacagttttgatgttataatgttaacttcataaaaaaagtcattttcatgacgtc 23116382  T
Q  103 gccatagaattttcca 118  Q
     |||||||||||||||    
T  23116383 accatagaattttcca 23116398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36866878 - 36866759
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||| | ||||||||||||||||||| |||| |||||||||||  ||||||| |||||||| || |||| |||||||| |||||    
T  36866878 ggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatattatagtgttaacttcaccagaaaaatcattttcgtgact 36866779  T
Q  101 tcgccatagaattttccaat 120  Q
    || |||||||||||||||||    
T  36866778 tcaccatagaattttccaat 36866759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 12910443 - 12910350
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||||||||||||||  |||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  12910443 tacaaacagtggggtgttacgcactatatttttgatgttatagttttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcc 12910350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 7693342 - 7693227
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    |||||||||||| ||||| ||||||||||||| ||||| |||| | | |||||||| ||||||| |||||||| || |||||||||||| |||||||| |    
T  7693342 tgaacttttgatgccactgtacaaacagtgggatgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagtcattttaatgacttcac 7693243  T
Q  105 catagaattttccaat 120  Q
    ||||||||||||||||    
T  7693242 catagaattttccaat 7693227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 699265 - 699152
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||| ||||||||||||||||||| |||||| |||||| ||| ||||||| ||||||||||| |||||||||| |||| ||||    
T  699265 gactgaacttttgatgtcactgtacaaacagtggggtgttactcactagattttttatgctatagtgttaacttcatcagaaaagtcattctcataactt 699166  T
Q  102 cgccatagaatttt 115  Q
    | ||||| ||||||    
T  699165 caccataaaatttt 699152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 40133501 - 40133379
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||| | |||||| |||||||||||| |||| | |||||||||  |||| || |||||||| || ||||||||||||| |||||    
T  40133501 ggactgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactataatgttaacttcaccacaaaagtcattttcgtgact 40133402  T
Q  101 tcgccatagaattttccaataat 123  Q
    || ||||||||||||||| ||||    
T  40133401 tcaccatagaattttccattaat 40133379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 19119975 - 19119859
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||||||||||| |  | | | |||||||| ||||||| |||||||| || |||||||||| ||||||||    
T  19119975 ggactgaacttttgatgtcactgtacaaacagtggggtgttactagcaacacttttgatgctatagtgttaacttcaccacaaaagtcattctcatgact 19119876  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  19119875 tcaccatagaattttcc 19119859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 26317774 - 26317862
Alignment:
Q  32 gtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaat 120  Q
    ||||||||||| ||  ||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  26317774 gtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaattttccaat 26317862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 35511537 - 35511653
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||| |||||||||||| |||||| |||||| | | |||||| |||| || ||||||||||| ||| ||||||||||||||||    
T  35511537 gactgaacttttgatgtcactttacaaacagtggagtgttactcactacagtgttgatgttataatgttaacttcatcagaaacgtcattttcatgactt 35511636  T
Q  102 cgccatagaattttcca 118  Q
    | |||||| ||||||||    
T  35511637 caccataggattttcca 35511653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32563265 - 32563150
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| |||| ||||||| |||||| |||| | | |||||||| ||||||| ||||||||||| |||| ||||||| ||||||    
T  32563265 ggactgaacttttgatgtcactgtacagacagtggagtgttactcacaacacttttgatgttatagtgttaacttcatcagaaaaatcattttaatgact 32563166  T
Q  101 tcgccatagaattttc 116  Q
    || |||||||||||||    
T  32563165 tcaccatagaattttc 32563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 38528296 - 38528411
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||| || ||||| |||||||||| ||| || | |||||||| ||||||| ||||||||||| ||||  ||||||||||||||    
T  38528296 gactgaacttttgatgtcactgtataaacaatggggtgttactcattacaattttgatgttatagtgttaacttcatcagaaaaaccattttcatgactt 38528395  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  38528396 caccatagaattttcc 38528411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 13956427 - 13956520
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    ||||||||||| ||||||| |||||| | |||||||| ||||||| ||||||||| | ||||||||||||||||||||| || |||||||||||    
T  13956427 tacaaacagtgaggtgttactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcc 13956520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 8741946 - 8742062
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtgggg-tgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||| ||| | |||||||| ||||| ||||| |||| | | |||||||| ||||||| |||||||| || |||||||||| ||||||||    
T  8741946 gactgaacttttgatgccattgtacaaacaatgggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgact 8742045  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  8742046 tcaccatagaattttcc 8742062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 35826542 - 35826658
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| |||||||| ||  |||||| ||| || |||||||||| ||||||  ||||||||  |||||||||||| ||||||||    
T  35826542 ggactgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatagtattaacttcacaaaaaaagtcattatcatgact 35826641  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  35826642 tcaccatagaattttcc 35826658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36860539 - 36860423
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||||||||||| |||| | |||||| ||  ||||||| |||||||| || |||| |||||||| |||||    
T  36860539 ggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatagtgttaacttcaccagaaaaatcattttcgtgact 36860440  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  36860439 tcaccatagaattttcc 36860423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 15724580 - 15724489
Alignment:
Q  27 aaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    |||||||||||||||| |||| | | |||||||| ||||||| |||||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  15724580 aaacagtggggtgttactcacaaaacttttgatgttatagtgttaacttcaccaaaaaagtcattctcataacttcaccatagaattttcca 15724489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25500985 - 25501099
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| ||||||||||  || | ||||||||||| |||||||||||| | | |||||||| ||||||| |||||| | || |||||||||| ||||||||    
T  25500985 ggacttaacttttgatggcagtgtacaaacagtgaggtgttattcacaacacttttgatgctatagtgttaactttaccagaaaagtcattctcatgact 25501084  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  25501085 tcaccatagaatttt 25501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9200349 - 9200233
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||| |||| | | |||||||| ||||||| |||||||| || |||||| ||||| ||||||    
T  9200349 ggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagttattttaatgact 9200250  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||| ||||||||    
T  9200249 tcaccataaaattttcc 9200233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 14409386 - 14409502
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| ||||  ||  || ||||||||| || |||||| |||||||||| ||||||| | |||||| || |||| ||||| |||||||||    
T  14409386 gactgaacttttgatgccaccgtattaagagtggggtgctactcactacatttttgatgttatagtgttgacttcaccagaaaaatcattctcatgactt 14409485  T
Q  102 cgccatagaattttcca 118  Q
    | |||||||||||||||    
T  14409486 caccatagaattttcca 14409502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24886220 - 24886102
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatc--aaaaaagtcattttcatga 98  Q
    ||||||||||||||||  || | ||||||||||||||||||| ||| || |||||||||| ||||||  |||||||| |  |||||||||||| ||||||    
T  24886220 ggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatagtattaacttcaccaaaaaaaagtcattctcatga 24886121  T
Q  99 cttcgccatagaattttcc 117  Q
     ||| ||||| ||||||||    
T  24886120 tttcaccataaaattttcc 24886102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31705670 - 31705785
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||| |||||||||  || | ||||||| || |||||||| ||  || |||||||||| ||||||| |||||||| ||||||| ||||||| ||||||    
T  31705670 ggactggacttttgatgtcattgtacaaacggtagggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttatgact 31705769  T
Q  101 tcgccatagaattttc 116  Q
    || |||||||||||||    
T  31705770 tcaccatagaattttc 31705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 5837670 - 5837557
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||| |||||||  |||| ||||||||||||||||||| |||| | | |||||||| ||||||| || ||||| || |||||||||| |||||| ||    
T  5837670 gactgaaattttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaccttcaccagaaaagtcattctcatgaatt 5837571  T
Q  102 cgccatagaatttt 115  Q
    | || |||||||||    
T  5837570 caccgtagaatttt 5837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 22974164 - 22974257
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    ||||||||||||| ||||| ||| ||  ||||||||| ||||||| |||||||| ||||||| ||||| |||| ||||| ||||||||||||||    
T  22974164 tacaaacagtgggatgttactcattacttttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttcaccatagaattttcc 22974257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 31786709 - 31786822
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    |||||||||||| ||||| ||||||||||||||   |  |||||| |||||| ||| ||||||| |||||||| ||||||||||||| |||  ||||| |    
T  31786709 tgaacttttgatgccactgtacaaacagtggggcagtgctcactacatttttcatgctatagtgttaacttcaccaaaaaagtcattctcactacttcac 31786808  T
Q  105 catagaattttcca 118  Q
     |||||||||||||    
T  31786809 tatagaattttcca 31786822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 8466856 - 8466745
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    |||||||||||| ||||| |||||| || |||||||||||||| | | |||||||| || |||| |||||||| || |||||||||| ||||||| ||      
T  8466856 tgaacttttgataccactgtacaaagag-ggggtgttattcacaacacttttgatgttacagtgttaacttcaccagaaaagtcattctcatgacctcat 8466758  T
Q  105 catagaattttcc 117  Q
    |||||||||||||    
T  8466757 catagaattttcc 8466745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 22255296 - 22255181
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactata-tttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||| ||| | ||||||| ||||||||||| ||| || | ||||||||| |||| || |||||||| ||||||||| ||||| |||||||    
T  22255296 actgaacttttgatgccattgtacaaacggtggggtgttactcattacattttttgatgttataatgttaacttcaccaaaaaagttatttttatgactt 22255197  T
Q  102 cgccatagaattttcc 117  Q
    | || |||| ||||||    
T  22255196 caccgtagagttttcc 22255181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 22019748 - 22019626
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| ||||||||||  |||| |||||||| |||||||||| |||| | | |||||||  ||||||  |||||||| || |||||||||| | || |||    
T  22019748 ggacttaacttttgatgtcactatacaaacaatggggtgttactcacaacacttttgattctatagttttaacttcaccagaaaagtcattctaataact 22019649  T
Q  101 tcgccatagaattttccaataat 123  Q
    || |||||||| |||||||||||    
T  22019648 tcaccatagaaatttccaataat 22019626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 14919587 - 14919704
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatc-aaaaaagtcattttcatgac 99  Q
    ||||||||||||||||  || | || |||||||| ||||||| ||| || |||||||||| |||| || |||||||||| |||||| | ||| |||||||    
T  14919587 ggactgaacttttgatgtcattatataaacagtgaggtgttactcattacatttttgatgttataatgttaacttcatcaaaaaaaataattctcatgac 14919686  T
Q  100 ttcgccatagaattttcc 117  Q
    ||| ||||| ||||||||    
T  14919687 ttcaccatataattttcc 14919704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 33908349 - 33908248
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||  |||||||||||| ||| || |||||| | |||||||||||||||| | |||||| || |||  ||||| ||||||||    
T  33908349 ggactgaacttttgatgccaccgtacaaacagtggagtgctactcactacacttttgatgatatagtgttgacttcaccagaaagttcattctcatgact 33908250  T
Q  101 tc 102  Q
    ||    
T  33908249 tc 33908248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 27330419 - 27330306
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| ||| | ||||||||||  ||||||| |||  | | |||||||| ||||||| |||||||| || ||||||||||  || |||||    
T  27330419 gactgaacttttgatgccattgtacaaacagtaaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcattcccacgactt 27330322  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  27330321 caccatagaattttcc 27330306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 28416590 - 28416662
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca 77  Q
    |||||||||||||||||| ||||||||||||| ||||| |||| ||| |||||||  ||||||| ||||||||    
T  28416590 tgaacttttgattccactgtacaaacagtgggatgttactcacaatacttttgatattatagtgttaacttca 28416662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 39572933 - 39572813
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    ||||||||||||||  ||||  ||||||||||| |||||| |||| | |||||| ||  ||||||  |||||| |  | |||||||||| ||||||||||    
T  39572933 actgaacttttgatgtcactgcacaaacagtggagtgttactcacaacattttttatattatagtattaacttaactagaaaagtcattctcatgacttc 39572834  T
Q  103 gccatagaattttccaataat 123  Q
     |||||||||||||| |||||    
T  39572833 accatagaattttcctataat 39572813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 43308711 - 43308818
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca-tcaaaaaagtcattttcatgac 99  Q
    |||||||||||||||| ||| | ||| ||||||||| ||||||||| || |||||||||| |||| || |||||| | | |||||||||||| |||||||    
T  43308711 ggactgaacttttgatgccattgtacgaacagtggg-tgttattcattacatttttgatgttataatgttaactttactaaaaaaagtcattctcatgac 43308809  T
Q  100 ttcgccata 108  Q
    ||| |||||    
T  43308810 ttcaccata 43308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22980909 - 22980794
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || |   ||||||||||||| ||| ||||| ||||||||||  ||||||| |||||||| || |||||||||| |||| |||    
T  22980909 ggactgaacttttgatgtcattgctcaaacagtggggtattactcactgtatttttgatactatagtgttaacttcaccagaaaagtcattctcataact 22980810  T
Q  101 tcgccatagaattttc 116  Q
    ||  |||| |||||||    
T  22980809 tcatcataaaattttc 22980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26268190 - 26268076
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| ||||||||||  |||  ||||||||||||||||||| |||  | | |||||||| ||||||| |||||||| || |||| ||||| ||||||||    
T  26268190 ggactaaacttttgatgtcaccgtacaaacagtggggtgttactcaaaacacttttgatgctatagtgttaacttcaccagaaaaatcattctcatgact 26268091  T
Q  101 tcgccatagaatttt 115  Q
    || |  |||||||||    
T  26268090 tcactgtagaatttt 26268076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 35933988 - 35933902
Alignment:
Q  31 agtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||| ||||||| |||| | | |||||||  ||||||| |||||||||||||||| ||||| |||||||||| ||||| ||||||||    
T  35933988 agtgaggtgttactcacaacacttttgattctatagtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaattttcc 35933902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8437082 - 8436981
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| |||||||| |||| ||||| |||||| | ||| || | ||||||| ||| |||| ||||||| ||||| ||||||||    
T  8437082 ggactgaacttttgatgtcactgtacaaacaatgggatgttactcactacactttggaagctatagtgttaatttcaccaaaaaaatcattctcatgact 8436983  T
Q  101 tc 102  Q
    ||    
T  8436982 tc 8436981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 27318552 - 27318660
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcca 106  Q
    ||||||||||  || | |||||||||||| |||||| |||||| |||||| ||| | ||||| |||||||| || |||| ||||| |||||||||| ||     
T  27318552 aacttttgatgtcattgtacaaacagtggtgtgttactcactacattttttatgttttagtgttaacttcaccagaaaaatcattctcatgacttcaccg 27318651  T
Q  107 tagaatttt 115  Q
    | |||||||    
T  27318652 ttgaatttt 27318660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 22616541 - 22616494
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| || ||||||||||||||||||||| ||||||||||||||    
T  22616541 taacttcaccagaaaagtcattttcatgacttcaccatagaattttcc 22616494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 21320798 - 21320752
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttc 116  Q
    |||||||||||||||||||||||| || ||||| |||||||||||||    
T  21320798 taacttcatcaaaaaagtcatttttattacttcaccatagaattttc 21320752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30969383 - 30969484
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | || ||| |||||||||||| |||| | | |||||||| ||||||| |||||||| || | || ||||| ||||||||    
T  30969383 ggactgaacttttgatgtcattgtataaatagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagataaatcattctcatgact 30969482  T
Q  101 tc 102  Q
    ||    
T  30969483 tc 30969484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 16004485 - 16004553
Alignment:
Q  51 atttttgatgatatagtgctaacttcatcaaaaaagtcattt-tcatgacttcgccatagaattttcca 118  Q
    |||||||||| ||||||| |||||||| || |||||||| || |||||||||  |||||||||||||||    
T  16004485 atttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaattttcca 16004553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 17158094 - 17158208
Alignment:
Q  6 gaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttc---atcaaaaaagtcattttcatgacttc 102  Q
    |||||||||||  || | ||||||| |||| |||||| ||| || |||||| ||| ||||||| |||||||   |  |||||| ||||||| ||||||||    
T  17158094 gaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaacttcacaaaaaaaaaaatcatttttatgacttc 17158193  T
Q  103 gccatagaattttcc 117  Q
     ||||||||||||||    
T  17158194 accatagaattttcc 17158208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25668765 - 25668690
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca 77  Q
    |||||||||||||||| ||||| | ||||||||||||||||| |||| | | |||||||| || |||| ||||||||    
T  25668765 ggactgaacttttgatgccactgttcaaacagtggggtgttactcacaacacttttgatgtta-agtgttaacttca 25668690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 21088825 - 21088943
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatc-aaaaaagtcattttcatgac 99  Q
    ||||||||||||||||  || | ||||||||||||||||| | |||| | |||||| ||  || |||  |||||||| | ||||||||||||||| ||||    
T  21088825 ggactgaacttttgatgtcattgtacaaacagtggggtgtcactcacaacattttttatactacagt-ttaacttcaccaaaaaaagtcattttcgtgac 21088923  T
Q  100 ttcgccatagaattttccaa 119  Q
    |||  | |||||||||||||    
T  21088924 ttcatcgtagaattttccaa 21088943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 22255659 - 22255608
Alignment:
Q  33 tggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaa 84  Q
    |||||||||| ||| || |||||||||| ||||||| |||||||||||||||    
T  22255659 tggggtgttactcattacatttttgatgttatagtgttaacttcatcaaaaa 22255608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 5829944 - 5829890
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaataatt 124  Q
    |||||||| ||||||| ||||||| | |||||| || ||||||||||||||||||    
T  5829944 taacttcaccaaaaaaatcatttttacgacttcaccctagaattttccaataatt 5829890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 23954850 - 23954904
Alignment:
Q  3 actgaacttttgattccactc-tacaaacagtggggtgttattcactatattttt 56  Q
    |||||||||||||| |||||  || |||||||||||||||| |||||||||||||    
T  23954850 actgaacttttgatgccactagtaaaaacagtggggtgttactcactatattttt 23954904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 5748475 - 5748443
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttc 102  Q
    |||||||| ||||||||||||||||||||||||    
T  5748475 taacttcaccaaaaaagtcattttcatgacttc 5748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 26411338 - 26411290
Alignment:
Q  72 acttcatcaaaaaagtcattttcatgacttcgccatagaattttccaat 120  Q
    |||||| ||||||| ||||| | |||||||| |||||||||||||||||    
T  26411338 acttcaccaaaaaaatcattctaatgacttcaccatagaattttccaat 26411290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 42721147 - 42721034
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||   ||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||||| |||||||||||||||| |    
T  42721147 tgaacttttgatgttactgtacaaacagtggggtgttactcactatattttttatgatatagggctaacttcaccaaaaaaatcattttcatgacttcac 42721048  T
Q  105 catagaattttcca 118  Q
    ||||||||||||||    
T  42721047 catagaattttcca 42721034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 15752141 - 15752027
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||| | ||||||||||| ||||||| ||||||||||||| ||| ||||||| |||||||| ||||||||||||| ||||||||    
T  15752141 ggactgaacttttgatgccattgtacaaacagtgaggtgttactcactatattttttatgttatagtgttaacttcaccaaaaaagtcattctcatgact 15752042  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  15752041 tcaccatagaatttt 15752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 2959860 - 2959744
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| | |||| | |||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  2959860 ggactgaacttttgatgtcactgtacaaacagtgggatgttacttactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgact 2959761  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  2959760 tcaccatagaattttcc 2959744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10182072 - 10182188
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| |||||||||||| ||||||  |||||||||||| ||| || |||  |||||||| ||||||||||||||||||||||    
T  10182072 ggactgaacttttgatgccactgtacaaacagtggcgtgttacgcactatattttttatgttacagttttaacttcaccaaaaaagtcattttcatgact 10182171  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  10182172 tcaccatagaattttcc 10182188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 34012442 - 34012557
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| ||||| |||||||||||| |||||| |||||| | | |||||| ||||||| ||||||||||| ||| ||||||||||||||||    
T  34012442 gactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcataaacgtcattttcatgactt 34012541  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  34012542 caccatagaattttcc 34012557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 41926275 - 41926161
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||| |||| ||||| ||||||||||||| | ||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||| |||    
T  41926275 ggactgaacttgtgatgccactgtacaaacagtgggatattactcactatatttttgatgttatagtattaacttcatcaaaaaaatcattttcataact 41926176  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  41926175 tcaccatagaatttt 41926161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18422763 - 18422647
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||| ||||||||||| ||  ||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||    
T  18422763 ggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcatttttatgact 18422664  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  18422663 tcaccatagaattttcc 18422647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 1547397 - 1547283
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    |||||||||||||| |||||  ||||||||||| |||||| |||| | |||||| ||| ||||||| |||||||| || |||||||||| ||||||||||    
T  1547397 actgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatagtgttaacttcaccagaaaagtcattctcatgacttc 1547298  T
Q  103 gccatagaattttcc 117  Q
     ||||||||||||||    
T  1547297 accatagaattttcc 1547283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 9903122 - 9903215
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatga 98  Q
    ||||||||||||  |||| ||||||||| ||||||||| |||||| | |||||||| ||||||| |||||||||||||||||||||||||||||    
T  9903122 tgaacttttgatgtcactgtacaaacagcggggtgttactcactacagttttgatgttatagtgttaacttcatcaaaaaagtcattttcatga 9903215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 10562264 - 10562165
Alignment:
Q  119 ataatttaaggagacatacatgcactttgttattaatat--tagggttaattaggtaaatgttcctcataaatatcaagaatttcagttttaatccctac 216  Q
    ||||||||||||||||| |||||||||||||||||||||  | |||||||||| ||| |||||||| ||||||||| ||||||||  |||||||||||||    
T  10562264 ataatttaaggagacatgcatgcactttgttattaatatagttgggttaattaagtagatgttccttataaatatctagaatttcgtttttaatccctac 10562165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 19899837 - 19899949
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    |||||||||||| ||| ||||||||||||| ||||||| ||  || |||||||||| ||||||| |||||||| ||||||| ||||| | |||||||| |    
T  19899837 tgaacttttgatgccattctacaaacagtgaggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcattattatgacttcac 19899936  T
Q  105 catagaattttcc 117  Q
    |||||||||||||    
T  19899937 catagaattttcc 19899949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 30254946 - 30254854
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    ||||||||||||| |||||| || || |||||||||| ||||||| |||||||||||||||||||||| | |||||||| ||||||||||||||    
T  30254946 tacaaacagtggg-tgttatccattacatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaattttcc 30254854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 15383044 - 15382929
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  || | ||||||| ||||| ||||| ||| || |||||||||| ||||||| ||| |||| ||||||||||||||| || ||||    
T  15383044 gactgaacttttgatgacattgtacaaacggtgggatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatttttataactt 15382945  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  15382944 caccatagaattttcc 15382929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 16415755 - 16415641
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtg-gggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    ||||||||||||| ||||| |||||||| |  |||||||| |||||| | |||||||| ||||||| |||||||| || |||||||||| ||||||||||    
T  16415755 ctgaacttttgatgccactgtacaaacatttagggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttc 16415656  T
Q  103 gccatagaattttcc 117  Q
     || |||||||||||    
T  16415655 accttagaattttcc 16415641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28564845 - 28564951
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||  ||||||| ||| || |||||||||| ||||||| |||||||||||||||| |||||||||| |||    
T  28564845 ggactgaacttttgatgtcattgtacaaacagtaaggtgttactcattacatttttgatgttatagtgttaacttcatcaaaaaaatcattttcataact 28564944  T
Q  101 tcgccat 107  Q
    || ||||    
T  28564945 tcaccat 28564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 3309255 - 3309143
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    |||||||||||| ||||| ||||||||||||| ||||| |||| | | |||||||| ||||||| |||||| | || |||||||||| |||||||||  |    
T  3309255 tgaacttttgataccactgtacaaacagtggg-tgttactcacaacacttttgatgttatagtgttaactttaccagaaaagtcattctcatgactttac 3309157  T
Q  105 catagaattttcca 118  Q
    ||||||||||||||    
T  3309156 catagaattttcca 3309143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21289784 - 21289661
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcacta-------tatttttgatgatatagtgctaacttcatcaaaaaagtcatttt 93  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||       |||| || ||||||||||| |||||||| || |||||||||| |    
T  21289784 ggactgaacttttgatgccactgtacaaacagtggggtgttactcactacattttttattatttatgatatagtgttaacttcaccagaaaagtcattct 21289685  T
Q  94 catgacttcgccatagaattttcc 117  Q
    ||||||||| | ||||| ||||||    
T  21289684 catgacttcacaatagatttttcc 21289661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 23999456 - 23999339
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  || |||||||| |||||||||||| ||  ||||||||| ||| | ||||| |||||||| ||||||| ||||| | ||||||||     
T  23999456 ctgaacttttgatgtcattctacaaatagtggggtgttactcgttatattttttatgttgtagtgttaacttcaccaaaaaaatcattcttatgacttca 23999357  T
Q  104 ccatagaattttccaata 121  Q
    ||||| ||||||||||||    
T  23999356 ccataaaattttccaata 23999339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 27563971 - 27564084
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca-tcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||  |||| |||||||||||| |||||| ||||||||||||| | | ||||||| |||||||| | |||||| |||||||||| ||||    
T  27563971 actgaacttttgatgtcactatacaaacagtggagtgttactcactatatttttaaagttatagtgttaacttcactaaaaaaaatcattttcataactt 27564070  T
Q  102 cgccatagaatttt 115  Q
    | || |||||||||    
T  27564071 caccgtagaatttt 27564084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 37618960 - 37619076
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttat--tcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||  || | |||||||||||||||||| |  ||| || |||||||||| ||||||| |||||||| ||||||||||||| | || |||    
T  37618960 actgaacttttgatgtcattttacaaacagtggggtgttttactcattaaatttttgatgttatagtgttaacttcaccaaaaaagtcattcttataact 37619059  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  37619060 tcaccatagaattttcc 37619076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 38823322 - 38823209
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  |||| |||||| |||||||||||| || | | | |||||||| ||||||| |||||| | || |||||||||| |||||||||| |    
T  38823322 tgaacttttgatgacactgtacaaatagtggggtgttactcgcaacaattttgatgctatagtgttaacttaaccagaaaagtcattctcatgacttcac 38823223  T
Q  105 catagaattttcca 118  Q
    ||||||||||||||    
T  38823222 catagaattttcca 38823209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11742414 - 11742530
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||||||||||| | || | | ||||||| |||||||| |||||||| || |||||||||| |||| |||    
T  11742414 ggactgaacttttgatgtcactgtacaaacagtggggtgttacttacaacacttttgataatatagtgttaacttcaccagaaaagtcattctcataact 11742513  T
Q  101 tcgccatagaattttcc 117  Q
    || | ||| ||||||||    
T  11742514 tcacgataaaattttcc 11742530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 32267142 - 32267030
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  || | ||||||||||||||||||| ||| || |||||||||| |||| || ||||||||  |||||||||||| | |||||||| |    
T  32267142 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatattgttaacttcacaaaaaaagtcattcttatgacttcac 32267043  T
Q  105 catagaattttcc 117  Q
    |||| ||||||||    
T  32267042 cataaaattttcc 32267030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 48620749 - 48620633
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||||||||||| |||| | | |||||||| |||| || ||||||||  | |||||||||||| || |||    
T  48620749 ggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgttatattgttaacttcacaagaaaagtcattttaataact 48620650  T
Q  101 tcgccatagaattttcc 117  Q
    ||  |||||||||||||    
T  48620649 tcaacatagaattttcc 48620633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 30327017 - 30327139
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| | | | ||||||| || |||| ||| ||| || |||||||||| ||||||| ||| ||||  |||||||||||||| |||||||    
T  30327017 gactgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtgttaaattcacaaaaaaagtcatttttatgactt 30327116  T
Q  102 cgccatagaattttccaataatt 124  Q
    | | |||||||||||||| ||||    
T  30327117 cactatagaattttccaaaaatt 30327139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 47279301 - 47279200
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||| ||| ||||| ||||||||||||||||||| |||| | | |||||||  |||| || |||||||| ||||||| ||||| ||||||||    
T  47279301 ggactgaactttcgatgccactgtacaaacagtggggtgttactcacaacacttttgatagtataatgttaacttcaccaaaaaaatcattctcatgact 47279202  T
Q  101 tc 102  Q
    ||    
T  47279201 tc 47279200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 10922835 - 10922724
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  || | ||||||||||||||| ||| ||| || |||||| ||| ||||||| |||||||| ||||||| ||||| |||||| ||| |    
T  10922835 tgaacttttgatgtcattgtacaaacagtggggtcttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcattctcatgatttcac 10922736  T
Q  105 catagaattttc 116  Q
    |||| |||||||    
T  10922735 cataaaattttc 10922724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14758153 - 14758038
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||  |||||||||| | ||| || |||||| | |||||||| ||||||| | |||||| || |||||||||| ||||||||    
T  14758153 ggactgaacttttgatgccaccgtacaaacagttgtgtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgact 14758054  T
Q  101 tcgccatagaattttc 116  Q
    || || || |||||||    
T  14758053 tcaccgtaaaattttc 14758038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 30254535 - 30254405
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||| | | ||| ||| || |||||||||| |||| || |||||||| ||||||||||||| | || |||    
T  30254535 ggactgaacttttgatgtcattgtacaaacagtgtg-tattactcattacatttttgatgttatattgttaacttcaacaaaaaagtcattcttataact 30254437  T
Q  101 tcgccatagaattttcc-aataatttaaggag 131  Q
    || |||||||||||||| ||||||| ||||||    
T  30254436 tcaccatagaattttcctaataattaaaggag 30254405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 7079168 - 7079258
Alignment:
Q  31 agtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaata 121  Q
    |||||||||||| |||| | | |||||||  ||||||| |||||||| ||||||||||||| |||||||||  ||||| ||||||||||||    
T  7079168 agtggggtgttactcacaacacttttgatattatagtgttaacttcaccaaaaaagtcattatcatgactttaccataaaattttccaata 7079258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 37451398 - 37451292
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||| || |||||||| | | || |||||||||| ||||||| |||||| | ||||||||||||||| ||||||    
T  37451398 ggactgaacttttgatgtcattgtacaaacggtagggtgttacttattacatttttgatgttatagtgttaactttaccaaaaaagtcatttttatgact 37451299  T
Q  101 tcgccat 107  Q
    || ||||    
T  37451298 tcaccat 37451292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 27267264 - 27267362
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||| || ||||| ||||||||||||||||| | |||||| |||||| |||   ||||| |||||||| ||||||| ||||| |||||||||    
T  27267264 gactgaacttttaatgccactgtacaaacagtggggtgtcactcactacattttttatg--ctagtgttaacttcaccaaaaaaatcattctcatgactt 27267361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 22170814 - 22170750
Alignment:
Q  53 ttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| ||||||| ||||||||| | ||||||||||||||||| ||| ||||||||||||||    
T  22170814 ttttgatgttatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaattttcc 22170750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 101
Target Start/End: Original strand, 27533048 - 27533144
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||| ||||| |||||| |||||| |||||  ||| ||| |||||||| ||||||| |||||||| || |||||||||| |||| ||||    
T  27533048 tgaacttttgatgccactgtacaaagagtgggttgttacccacaatacttttgatgctatagtgttaacttcaccagaaaagtcattctcataactt 27533144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32216167 - 32216091
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca 77  Q
    |||||||||||||||  ||| | |||||||||||| |||||| |||||| |||||||||| ||||||| ||||||||    
T  32216167 ggactgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtgttaacttca 32216091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 47682562 - 47682675
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggg-gtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||| ||||| ||||| ||||||| |||||| |||| | |||||| ||| ||  ||| |||||||| ||||||||||| | ||||||||||     
T  47682562 tgaacttttgataccactgtacaagcagtgggagtgttactcacaacattttttatgcta--gtgttaacttcaccaaaaaagtcactctcatgacttca 47682659  T
Q  104 ccatagaattttccaa 119  Q
    ||||| ||||||||||    
T  47682660 ccataaaattttccaa 47682675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 238577 - 238690
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | |||||||||| || ||||| |||| | |||||| ||  ||||||| |||||||| ||||||||| |||||| |||||    
T  238577 ggactgaacttttgatgtcattgtacaaacagt-ggatgttactcacaacatttttaatactatagtgttaacttcaccaaaaaagttattttcgtgact 238675  T
Q  101 tcgccatagaatttt 115  Q
    || | ||||||||||    
T  238676 tcactatagaatttt 238690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 4330392 - 4330290
Alignment:
Q  2 gactgaacttttgattccactctacaaacagt-ggggtgttattcactatatttttgatgatatagtg-ctaacttcatcaaaaaagtcattttcatgac 99  Q
    ||||||||||||||| ||||| |||||||| | ||||||||| |||||| | |||||||| |||||||  || |||||||| |||||||||| |||| ||    
T  4330392 gactgaacttttgatcccactgtacaaacattgggggtgttactcactacacttttgatgctatagtgtttatcttcatcagaaaagtcattctcataac 4330293  T
Q  100 ttc 102  Q
    |||    
T  4330292 ttc 4330290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 28769764 - 28769651
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||| |||| |||||| ||| | ||||||| ||||| ||||| ||| || ||||||||||  |||||| ||||||||  |||||||| ||||| ||||||    
T  28769764 ggaccgaacctttgatgccattgtacaaacggtggg-tgttactcattacatttttgatgtcatagtgttaacttcacaaaaaaagttatttttatgact 28769666  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  28769665 tcaccatagaatttt 28769651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 39393489 - 39393379
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcca 106  Q
    |||||||||| ||||| |||||||| ||  || ||| |||| | | |||||||| ||||||| ||||||||| | |||||||||| |||| ||||| ||     
T  39393489 aacttttgatgccactgtacaaacaatgaagtattactcacaacacttttgatgctatagtgttaacttcattagaaaagtcattctcataacttcaccg 39393390  T
Q  107 tagaattttcc 117  Q
    |||||||||||    
T  39393389 tagaattttcc 39393379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 8222208 - 8222127
Alignment:
Q  36 ggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    ||||||| ||| || |||||||||| ||||||| ||||||||  ||||| |||||||| |||||||| || |||||||||||    
T  8222208 ggtgttactcattacatttttgatgttatagtgttaacttcactaaaaaggtcatttttatgacttcaccgtagaattttcc 8222127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27227549 - 27227658
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| ||||||||||| ||||      | || |||||| ||| ||  ||| |||||||| ||||||| ||||| ||||||||    
T  27227549 ggactgaacttttgatgccactgtacaaacagtgaggtg------agtacattttttatgcta--gtgttaacttcaccaaaaaaatcattctcatgact 27227640  T
Q  101 tcgccatagaattttcca 118  Q
    || |||||||||||||||    
T  27227641 tcaccatagaattttcca 27227658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 47279204 - 47279149
Alignment:
Q  72 acttcatcaaaaaagtcattttcatgacttcgccatagaattttccaataatttaa 127  Q
    |||||| ||||||||||||| |||||||||| ||||||| ||||||| ||||||||    
T  47279204 acttcaccaaaaaagtcattctcatgacttcaccatagatttttccattaatttaa 47279149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 31621617 - 31621735
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||| ||||||| ||||  |||||| || |||||| || ||| || |  ||||||| ||||||| | ||||||  | |||||||||| ||||||||    
T  31621617 ggactgaatttttgatgccaccgtacaaatagcggggtgctactcaatacacctttgatgttatagtgttgacttcactagaaaagtcattctcatgact 31621716  T
Q  101 tcgccatagaattttccaa 119  Q
    || || |||||||||||||    
T  31621717 tcaccgtagaattttccaa 31621735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 15168178 - 15168085
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||||||||||| || |||||| | |||||||| ||||||| | |||||| || ||||  |||| |||| ||||| | ||||||||||||    
T  15168178 tacaaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaagcattctcatcacttcacgatagaattttcc 15168085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 46931520 - 46931447
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca 77  Q
    ||||| ||||||| ||  ||||||||||||||||| ||| ||| || |||||||||| ||||||| ||||||||    
T  46931520 ctgaatttttgatgccgttctacaaacagtggggtattactcattacatttttgatgttatagtgttaacttca 46931447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40884925 - 40884849
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca 77  Q
    |||||||||||||||| ||||  |||||||||||||||| || |||||| | |||||||| ||| ||| | ||||||    
T  40884925 ggactgaacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgttatggtgttgacttca 40884849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 13876920 - 13876967
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| || ||||||||||||||| ||||| ||||||||||||||    
T  13876920 taacttcaccataaaagtcattttcataacttcaccatagaattttcc 13876967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 27118377 - 27118315
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaataatttaaggaga 132  Q
    |||||| |||||||||||||||||||||||||   |||| |||||||||| | ||||| ||||    
T  27118377 taactttatcaaaaaagtcattttcatgactttatcataaaattttccaaaattttaatgaga 27118315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 51128970 - 51128884
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtc 88  Q
    |||||||||||||||  || | ||||||| |||| |||||| ||| || |||||| ||| ||||||| ||||||||  |||||||||    
T  51128970 gactgaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaacttcactaaaaaagtc 51128884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 4150490 - 4150535
Alignment:
Q  72 acttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||| || |||||||||| |||||||||| ||||||||||||||    
T  4150490 acttcaccagaaaagtcattatcatgacttcaccatagaattttcc 4150535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 3535044 - 3534968
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca 77  Q
    ||||||||||||||||  ||||  |||||||||  ||||||| |||| | | |||||||| ||||||| ||||||||    
T  3535044 ggactgaacttttgatgtcactgcacaaacagtaaggtgttactcacaacacttttgatgttatagtgttaacttca 3534968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 42663786 - 42663830
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattt 114  Q
    ||||||||  |||||||||||| |||||||||| |||||||||||    
T  42663786 taacttcactaaaaaagtcattatcatgacttcaccatagaattt 42663830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 118
Target Start/End: Complemental strand, 43579277 - 43579241
Alignment:
Q  82 aaaagtcattttcatgacttcgccatagaattttcca 118  Q
    |||||||||| |||||||||| |||||||||||||||    
T  43579277 aaaagtcattctcatgacttcaccatagaattttcca 43579241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 36493783 - 36493897
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| |||||||| |||||||||| ||||||||||||||||| ||||||  |||||||| ||||||||| ||||||||||||    
T  36493783 ggactgaacttttgatgtcactgtacaaacaatggggtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagttattttcatgact 36493882  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  36493883 tcaccatagaatttt 36493897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34948192 - 34948306
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||| | | |||||||| ||||||| |||||||  || |||||||||| ||||||||    
T  34948192 ggactgaacttttgatgccactttacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcgccagaaaagtcattctcatgact 34948291  T
Q  101 tcgccatagaatttt 115  Q
    || ||||| ||||||    
T  34948292 tcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 35021136 - 35021246
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcca 106  Q
    |||||||||  ||| | |||||||||||| |||||| |||||| |||||||||| |||| || |||||||| || ||||||||||||||||||||| |||    
T  35021136 aacttttgacgccaatgtacaaacagtggtgtgttactcactacatttttgatgttataatgttaacttcaccagaaaagtcattttcatgacttcacca 35021235  T
Q  107 tagaattttcc 117  Q
    |||||||||||    
T  35021236 tagaattttcc 35021246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 37775780 - 37775670
Alignment:
Q  6 gaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcc 105  Q
    ||||||||||| ||||| ||||||||||||||||||| |||| | |||||| ||  |||||||||||||||| ||||||| ||||||| |||||||| ||    
T  37775780 gaacttttgatgccactgtacaaacagtggggtgttactcacaacatttttaatattatagtgctaacttcaccaaaaaaatcattttaatgacttcacc 37775681  T
Q  106 atagaattttc 116  Q
     ||||||||||    
T  37775680 gtagaattttc 37775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 4205209 - 4205116
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||||||||||||||||||  | |||||||||  ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  4205209 tacaaacagtggggtgttattcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaattttcc 4205116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 34361589 - 34361702
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||| ||  || ||||||||||||||||||||| ||| || |||||| ||| ||||||| |||||||| ||||||||||||| | ||||||||     
T  34361589 ctgaacttttaatgtcattctacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttca 34361688  T
Q  104 ccatagaattttcc 117  Q
    ||||||||||||||    
T  34361689 ccatagaattttcc 34361702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 55241199 - 55241316
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| ||||||||||||||||||| || | | | ||||||| |||||||  ||||||||  | |||||||||| ||||||||    
T  55241199 ggactgaacttttgatgccactgtacaaacagtggggtgttactcgcaacaattttgataatatagtattaacttcactagaaaagtcattctcatgact 55241298  T
Q  101 tcgccatagaattttcca 118  Q
    || |||||||||||||||    
T  55241299 tcaccatagaattttcca 55241316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19089548 - 19089664
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||||||||||| ||| || | |||||||  ||||||| |||||||||||||||||| ||| | ||||||    
T  19089548 ggactgaacttttgatgtcattatacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaagttattcttatgact 19089647  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  19089648 tcaccatagaattttcc 19089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25701152 - 25701268
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| |||||||||| |||||||| |||||| | |||||||| |||| || |||||| | ||||||||||||| ||||||||    
T  25701152 ggactgaacttttgatgtcactgtacaaacagtagggtgttactcactacacttttgatgttataatgttaactttaccaaaaaagtcattatcatgact 25701251  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||| ||||||||    
T  25701252 tcaccataaaattttcc 25701268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 38011970 - 38011854
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||  |||||||||||||||| ||||||||| | |||||||| ||||||| | |||||| || |||||||||| |||||| |    
T  38011970 ggactgaacttttgatggcaccgtacaaacagtggggtgctattcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgatt 38011871  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  38011870 tcaccatagaattttcc 38011854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19440743 - 19440861
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgac- 99  Q
    |||||||||||||||| ||| | ||||||| |||| |||||| ||| || |||||||||| ||||||| |||| ||| ||||||||||||| |||||||     
T  19440743 ggactgaacttttgatgccattgtacaaacggtggagtgttaatcattacatttttgatgttatagtgttaacatcaccaaaaaagtcattctcatgact 19440842  T
Q  100 ttcgccatagaattttcca 118  Q
    ||| |||||||||||||||    
T  19440843 ttcaccatagaattttcca 19440861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 47253864 - 47253751
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| || ||||| |||| ||||| |||| | | |||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  47253864 ggactgaacttttgatgtcactgtataaacaatggg-tgttactcacaacacttttgatgatatagtgttaacttcaccaaaaaagtcattctcatgact 47253766  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  47253765 tcaccatagaatttt 47253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 32912678 - 32912791
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  || |||||||| | | |||||||| ||| || |||||||||| ||||||| |||||||| ||||||||||||| | ||||||||     
T  32912678 ctgaacttttgatatcattctacaaatactagggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttca 32912777  T
Q  104 ccatagaattttcc 117  Q
    ||||||||||||||    
T  32912778 ccatagaattttcc 32912791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 37287846 - 37287733
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatc-aaaaaagtcattttcatgacttcg 103  Q
    |||||||||||| ||||| ||||||||||||||||||| |||| | | |||||||| ||||||| |||||| | | |||||||||||| |||| |||||     
T  37287846 tgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagtcattctcattacttca 37287747  T
Q  104 ccatagaattttcc 117  Q
    ||||||||||||||    
T  37287746 ccatagaattttcc 37287733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 49376082 - 49375965
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatca-aaaaagtcattttcatgact 100  Q
    ||||||||||||||| ||||| ||||| ||||||||||||| |||| | | |||||||| |||| || |||||||| || ||||||||||| ||||||||    
T  49376082 gactgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctataatgttaacttcaccagaaaaagtcattctcatgact 49375983  T
Q  101 tcgccatagaattttcca 118  Q
    || || ||||||||||||    
T  49375982 tcaccgtagaattttcca 49375965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 17167825 - 17167709
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  || | ||||||||||||||||||| |||| | |||||||||  |||| || ||||||||||| ||||||||||||| | ||||| |    
T  17167825 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcac 17167726  T
Q  105 catagaattttccaata 121  Q
    ||||||||||| |||||    
T  17167725 catagaattttacaata 17167709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 17173402 - 17173286
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  || | ||||||||||||||||||| |||| | |||||||||  |||| || ||||||||||| ||||||||||||| | ||||| |    
T  17173402 tgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcac 17173303  T
Q  105 catagaattttccaata 121  Q
    ||||||||||| |||||    
T  17173302 catagaatttttcaata 17173286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 39398033 - 39397917
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||| |||||||| |||||||||| |||| | | |||| ||| ||||||| |||||||| || |||||||||| | |||||||    
T  39398033 gactgaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagtcattctaatgactt 39397934  T
Q  102 cgccatagaattttcca 118  Q
    | |||||||||||||||    
T  39397933 caccatagaattttcca 39397917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 4598108 - 4597994
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| ||||||||||||||||||| |||| | |  ||||||| ||||||| |||||||| || |||||||||| | ||||||    
T  4598108 ggactgaacttttgatgccactgtacaaacagtggggtgttactcacaaca-ctttgatgttatagtgttaacttcaccagaaaagtcattctaatgact 4598010  T
Q  101 tcgccatagaattttc 116  Q
    || ||||| |||||||    
T  4598009 tcaccataaaattttc 4597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 7703633 - 7703515
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||  ||||||||||||||||||| | || | | |||||||| ||||||| |||||||| || |||||||||| ||||||||    
T  7703633 ggactgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatagtgttaacttcaccagaaaagtcattctcatgact 7703534  T
Q  101 tcgccatagaattttccaa 119  Q
    |   |||||||||||||||    
T  7703533 ttaacatagaattttccaa 7703515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 117
Target Start/End: Complemental strand, 25184206 - 25184113
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||||| | |||||| ||| || |||||||||| ||||||| |||||||| ||||| ||||||| |||||||||| ||||||||||||||    
T  25184206 tacaaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttcc 25184113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37663836 - 37663950
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||||||||||| ||| || | |||| ||| ||  ||| |||||||||||||||||||||| | ||||||    
T  37663836 ggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacagttttaatgtta--gtgttaacttcatcaaaaaagtcattcttatgact 37663933  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  37663934 tcaccatagaattttcc 37663950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 28003082 - 28003198
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||| |||||||||||| ||  || | |||| | |||||||| ||||||| | |||||| || |||||||||| |||||||||    
T  28003082 gactgaacttttgatgtcactgtacaaacagtggagtactactgactacacttttgatgctatagtgttgacttcaccagaaaagtcattctcatgactt 28003181  T
Q  102 cgccatagaattttcca 118  Q
    | |||||||||||||||    
T  28003182 caccatagaattttcca 28003198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 53124372 - 53124284
Alignment:
Q  32 gtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaat 120  Q
    ||||||||||| ||| ||||||||||||| ||||||| |||||||| ||||||| ||||||| ||||||||  |||| |||||||||||    
T  53124372 gtggggtgttactcattatatttttgatgttatagtgttaacttcaccaaaaaaatcattttaatgacttcatcatataattttccaat 53124284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 55478014 - 55478106
Alignment:
Q  25 acaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    ||||||||||| |||||| ||  || |||||||||| ||||||| |||||||| ||||||| ||||| |||||||||| ||||||||||||||    
T  55478014 acaaacagtggagtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 55478106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 30002720 - 30002835
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||| ||||||||||| ||||||| |||| | | |||||||| || |||| |||||||| || |||| ||||||| |||||||    
T  30002720 gactgaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacagtgttaacttcaccagaaaaatcattttaatgactt 30002819  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||| ||||||    
T  30002820 caccatagagttttcc 30002835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6864151 - 6864038
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||| ||||||||| | | | |||||| ||| || ||||||||| || |||||||||| ||||||| |||||||| ||||||||||||| |||||||     
T  6864151 ggactggacttttgatgctattgtacaaaaagttggatgttattcattaaatttttgatgttatagtgataacttcaccaaaaaagtcattctcatgaca 6864052  T
Q  101 tcgccatagaattt 114  Q
    || ||||| |||||    
T  6864051 tcaccatacaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 9139357 - 9139247
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||| ||  |||| ||||||| ||||||||||| ||||||| ||||  ||| ||||  | |||||||| ||||||||||| |||||||||||| |    
T  9139357 tgaactttttatgtcactgtacaaacggtggggtgttactcactatttttt--atgctataacgttaacttcaccaaaaaagtcaatttcatgacttcac 9139260  T
Q  105 catagaattttcc 117  Q
    |||||||||||||    
T  9139259 catagaattttcc 9139247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 46888252 - 46888353
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| || || |||||| |||||||| ||| |||||| | |||||||| ||||||  ||||||||||| |||||| |||||| |||||    
T  46888252 ggactgaacttttgatgccgctgtacaaatagtggggtattactcactacaattttgatgttatagtattaacttcatcagaaaagttattttcttgact 46888351  T
Q  101 tc 102  Q
    ||    
T  46888352 tc 46888353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 4396418 - 4396326
Alignment:
Q  25 acaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||| ||||||||||| ||| || |||||| ||| ||||||| ||||||||  |||||||||||||| |||||||| | ||||||||||||    
T  4396418 acaaacggtggggtgttactcattacattttttatgttatagtgttaacttcactaaaaaagtcatttttatgacttcactatagaattttcc 4396326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 29584296 - 29584409
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| ||| | ||||||||||| ||||||| |||  | | |||||||| ||||||| |||||||| || ||||||||||  || |||||    
T  29584296 gactgaacttttgatgccattgtacaaacagtgaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcattcccacgactt 29584393  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  29584394 caccatagaattttcc 29584409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 35025683 - 35025799
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  ||   || ||||||||||||| || |||||| | |||||||| ||||||| | |||||| || |||| ||||||||||||||    
T  35025683 ggactgaacttttgatgtcaacgtataaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcattttcatgact 35025782  T
Q  101 tcgccatagaattttcc 117  Q
    ||  |||||||||||||    
T  35025783 tcagcatagaattttcc 35025799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32592209 - 32592108
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| |||||||||||| |||||| || | | | |||||||  | ||||| |||||||||||||||||||||| | ||||||    
T  32592209 ggactgaacttttgatgtcactatacaaacagtggagtgttactctcaacacttttgatactgtagtgttaacttcatcaaaaaagtcattataatgact 32592110  T
Q  101 tc 102  Q
    ||    
T  32592109 tc 32592108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33341515 - 33341397
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattc---actat-atttttgatgatatagtgctaacttcatcaaaaaagtcattttcat 96  Q
    |||||||||||||||| ||||| ||||||||||||||||||  ||   || || | |||||||||||||||| ||| |||| || |||| ||||| ||||    
T  33341515 ggactgaacttttgatgccactgtacaaacagtggggtgttcctcgcaacaatcaattttgatgatatagtgttaatttcaccagaaaaatcattctcat 33341416  T
Q  97 gacttcgccatagaatttt 115  Q
    |||||| | ||||||||||    
T  33341415 gacttcactatagaatttt 33341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 117
Target Start/End: Original strand, 7152235 - 7152317
Alignment:
Q  35 gggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| |||||||| |||||||| |||| || |||||| | || ||||||||||  ||||||||| ||||||||||||||    
T  7152235 gggtgttactcactatacttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaattttcc 7152317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 50764842 - 50764747
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    ||||||||||||  |||  ||||||||||||||||||| |||| | | |||||||| ||  ||| |||||||||||||||||| ||| ||||||||||    
T  50764842 tgaacttttgatgtcaccgtacaaacagtggggtgttactcacaacacttttgatgtta--gtgttaacttcatcaaaaaagttattctcatgacttc 50764747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 27396726 - 27396618
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcca 106  Q
    ||||||||||  || | |||||||||| |||||||| |||  | | |||| ||| |||| || |||||||| || |||||||||| |||||||||| |||    
T  27396726 aacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataatgttaacttcaccagaaaagtcattctcatgacttcacca 27396627  T
Q  107 tagaatttt 115  Q
    |||||||||    
T  27396626 tagaatttt 27396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 50697354 - 50697242
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  || | ||||||| || |||||||| ||  ||||||||| ||| ||||||| | ||||||  |||||| ||||||| |||||||| |    
T  50697354 tgaacttttgatgtcattgtacaaacggtagggtgttactcgttatattttttatgttatagtgtttacttcactaaaaaaatcatttttatgacttcac 50697255  T
Q  105 catagaattttcc 117  Q
    | |||||||||||    
T  50697254 cgtagaattttcc 50697242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 3042726 - 3042611
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||| |||||||  || | || |||| ||||||| ||| ||| || |||||  ||| ||||||| |||||||| ||||||| ||||||| |||| ||    
T  3042726 gactgaatttttgatgtcattgtataaacggtggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgattt 3042627  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  3042626 caccatagaattttcc 3042611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23761188 - 23761089
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||| ||||||| |||| | | |||||||| ||||||| |||||| |  | || ||||||| ||||||||    
T  23761188 ggactgaacttttgatgtcactatacaaacagtgaggtgttactcacaacacttttgatgttatagtgttaactttacaagaatagtcattctcatgact 23761089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 17272075 - 17272011
Alignment:
Q  53 ttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| ||||||| |||||||| || ||||||||||  || |||||| ||||||||||||||    
T  17272075 ttttgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcc 17272011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 2704559 - 2704512
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| || ||||||||||||||||||||| ||||| ||||||||    
T  2704559 taacttcaccagaaaagtcattttcatgacttcaccataaaattttcc 2704512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 38812261 - 38812308
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| || |||||||||| |||||||||| ||||||||||||||    
T  38812261 taacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 38812308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 47073658 - 47073705
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| ||||||||||||| |||||||||  ||||||||||||||    
T  47073658 taacttcaccaaaaaagtcattatcatgactttaccatagaattttcc 47073705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 54499357 - 54499424
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcatt 91  Q
    ||||||| ||||||||||| |||| | | |||||||| ||||||| |||||||| || ||||||||||    
T  54499357 tacaaacggtggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcatt 54499424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 51204626 - 51204580
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttc 116  Q
    |||||||| || |||||||||||| |||||||| |||||||||||||    
T  51204626 taacttcaccagaaaagtcatttttatgacttcaccatagaattttc 51204580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 17612382 - 17612333
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaa 119  Q
    ||||||||| |||||| ||||| |||||||||| ||||||||||| ||||    
T  17612382 taacttcattaaaaaaatcattctcatgacttcaccatagaatttaccaa 17612333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 115
Target Start/End: Original strand, 20097492 - 20097537
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaatttt 115  Q
    |||||||| || |||||||||| |||||||||| ||||||||||||    
T  20097492 taacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 23518400 - 23518473
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttc 76  Q
    |||||| ||||||| ||||| ||  ||||||||||||||| |||||| | |||| ||| ||||||| |||||||    
T  23518400 actgaatttttgatgccactgtattaacagtggggtgttagtcactacagttttaatgttatagtgttaacttc 23518473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 46884198 - 46884251
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaataat 123  Q
    |||||||  ||||||||||||||| |||||||| | ||||||||||||| ||||    
T  46884198 taacttcgccaaaaaagtcatttttatgacttcactatagaattttccattaat 46884251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 38811860 - 38811812
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    |||||||| || |||| ||||| |||||||||| |||||||||||||||    
T  38811860 taacttcaccagaaaaatcattctcatgacttcaccatagaattttcca 38811812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32821123 - 32821239
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||| | |||||||||||| |||||| |||||| |||||||||| |||| || |||||||| ||||||| ||||||||||||||    
T  32821123 ggactgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttatattgttaacttcaccaaaaaaatcattttcatgact 32821222  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  32821223 tcaccatagaattttcc 32821239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37347113 - 37346995
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| |||||||| |||||||||| ||| ||||||||||||| ||||||  |||||||| ||||||| ||||||||||||||    
T  37347113 ggactgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatagtattaacttcaccaaaaaaatcattttcatgact 37347014  T
Q  101 tcgccatagaattttccaa 119  Q
    || ||||| ||||||||||    
T  37347013 tcaccataaaattttccaa 37346995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 5657552 - 5657668
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||| | | |||||||| ||||||| ||||||||  | |||||||||| |||||||||    
T  5657552 gactgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaagtcattctcatgactt 5657651  T
Q  102 cgccatagaattttcca 118  Q
    | |||||||||||||||    
T  5657652 caccatagaattttcca 5657668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31520793 - 31520909
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| |||||||| ||| |||||| ||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||    
T  31520793 ggactgaacttttgatgtcactgtacaaacaatggagtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagtcattttcatgact 31520892  T
Q  101 tcgccatagaattttcc 117  Q
    ||  |||| ||||||||    
T  31520893 tcatcataaaattttcc 31520909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 37109962 - 37109844
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  || | ||||||| ||||||||||| ||| || |||||| ||| ||||||| |||||||| ||||||||||||||| |||||||    
T  37109962 gactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgactt 37109863  T
Q  102 cgccatagaattttccaat 120  Q
    | |||||||||||||||||    
T  37109862 caccatagaattttccaat 37109844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 115
Target Start/End: Original strand, 44413454 - 44413564
Alignment:
Q  6 gaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca-tcaaaaaagtcattttcatgacttcgc 104  Q
    |||||||||||| || | |||||||| |||||||||| ||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||  |    
T  44413454 gaacttttgatttcagtgtacaaacattggggtgttactcactatatttttgatgttatagtgttaacttcattaaaaaaagtcattttcatgactttac 44413553  T
Q  105 catagaatttt 115  Q
    |||||||||||    
T  44413554 catagaatttt 44413564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 11071295 - 11071182
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagt-cattttcatgactt 101  Q
    ||||||||||||||  |||| |||||||||||| |||||| || ||||||||||||||||||||| ||||||| | ||||||| | ||||||||||||||    
T  11071295 actgaacttttgatgtcactgtacaaacagtggagtgttactcgctatatttttgatgatatagtactaactttaccaaaaaaatacattttcatgactt 11071196  T
Q  102 cgccatagaatttt 115  Q
    | ||||||||||||    
T  11071195 caccatagaatttt 11071182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27283835 - 27283718
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||| || | ||||||| ||||||||||| ||| || |||||||||| ||||||| |||||||| ||||||| ||||||| || |||    
T  27283835 ggactgaacttttgatttcattgtacaaacggtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttataact 27283736  T
Q  101 tcgccatagaattttcca 118  Q
    || |||||||||||||||    
T  27283735 tcaccatagaattttcca 27283718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 24211829 - 24211717
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    ||||||||||||| ||| |||| ||||||| |||||||| ||| || |||||||||| ||||||| |||||||| ||||||||||||| | ||||||||     
T  24211829 ctgaacttttgatgccattctataaacagtagggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttca 24211730  T
Q  104 ccatagaattttc 116  Q
    |||||||||||||    
T  24211729 ccatagaattttc 24211717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22687330 - 22687217
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| |||||  ||||||||||| |||||| |||| | |||||||||| ||||||| ||||||||||| |||||||||| ||||||||    
T  22687330 ggactgaacttttgataccactgcacaaacagtggagtgttactcacaacatttttgatgttatagtgttaacttcatcagaaaagtcattctcatgact 22687231  T
Q  101 tcgccatagaattttcc 117  Q
    |   |||||||||||||    
T  22687230 t---catagaattttcc 22687217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 8861376 - 8861259
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||  | | |||||||| ||||||| |||||||   | |||||||||| ||||||||    
T  8861376 ggacttaacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatagtgttaacttcgcgagaaaagtcattctcatgact 8861277  T
Q  101 tcgccatagaattttcca 118  Q
    || |||||||||||||||    
T  8861276 tcaccatagaattttcca 8861259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 43686131 - 43686011
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||| | ||||||||||||| ||||| |||| | |||||||||  ||||||| |||||||| | |||||||||||||| |||||    
T  43686131 ggactgaacttttgatgccattgtacaaacagtggg-tgttactcacaacatttttgatattatagtgttaacttcacccaaaaagtcattttcgtgact 43686033  T
Q  101 tcgccatagaattttccaataa 122  Q
    || |||||||||||||| ||||    
T  43686032 tcaccatagaattttcctataa 43686011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 17842657 - 17842772
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||| ||||||||  || | ||||||| ||||||||||| ||| || |||||| ||| ||||||| |||||||| ||||||||||||||| |||||||    
T  17842657 gactgagcttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgactt 17842756  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  17842757 caccatagaattttcc 17842772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4583010 - 4582892
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | |||||| |||||||||||| |||| | |||||||||  ||||||  |||||||| || ||||||||||||| |||||    
T  4583010 ggactgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagtattaacttcaccagaaaagtcattttcgtgact 4582911  T
Q  101 tcgccatagaattttccaa 119  Q
    || ||||||||||||||||    
T  4582910 tcaccatagaattttccaa 4582892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 7334883 - 7334769
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    ||||||||||||||  || | ||||||||||||||||||| ||| || || ||| ||| ||||||| |||||||||||||||||||||| ||| ||||||    
T  7334883 actgaacttttgatgtcattgtacaaacagtggggtgttactcattacatattttatgttatagtgttaacttcatcaaaaaagtcattctcacgacttc 7334784  T
Q  103 gccatagaattttcc 117  Q
     || |||||||||||    
T  7334783 accgtagaattttcc 7334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12165843 - 12165725
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| |||| | | ||| |||| ||||||| |||||||| || |||||||||||| | ||||    
T  12165843 ggacttaacttttgatgccactgtacaaacagtggggtgttactcacaacactttggatgctatagtgttaacttcaccagaaaagtcattttaacgact 12165744  T
Q  101 tcgccatagaattttccaa 119  Q
    || || |||||||||||||    
T  12165743 tcaccgtagaattttccaa 12165725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 23111277 - 23111167
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    |||||||||||| ||| | |||||| ||||| |||||| |||| |||||||||||| ||||||| |||||||| || |||| |||||||||||||||| |    
T  23111277 tgaacttttgatgccattgtacaaatagtggtgtgttactcacaatatttttgatgttatagtgttaacttcaccagaaaaatcattttcatgacttcac 23111178  T
Q  105 catagaatttt 115  Q
    || ||||||||    
T  23111177 cacagaatttt 23111167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30055618 - 30055501
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaa-aaaagtcattttcatgac 99  Q
    ||||||||||||||||  || | ||||||||||||||||||| ||| || | |||||||  ||||||| |||||||||||| |||||||||| | |||||    
T  30055618 ggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaaagtcattcttatgac 30055519  T
Q  100 ttcgccatagaattttcc 117  Q
    ||| ||||||||||||||    
T  30055518 ttcaccatagaattttcc 30055501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21991727 - 21991611
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||||||||||| || | | | |||||||| ||||||| |||||||| || |||| ||||| ||||||||    
T  21991727 ggactgaacttttgatgacactgtacaaacagtggggtgttactcgcaacaattttgatgctatagtgttaacttcaccataaaaatcattctcatgact 21991628  T
Q  101 tcgccatagaattttcc 117  Q
    || || |||||||||||    
T  21991627 tcaccctagaattttcc 21991611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 26524397 - 26524513
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||| ||||||||| |||||  ||||||| ||| |||||| |||| | |||||||||| ||||||| |||| ||| || |||||||||| ||||||||    
T  26524397 ggactggacttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatagtgttaacatcaccagaaaagtcattctcatgact 26524496  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  26524497 tcaccatagaattttcc 26524513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27421449 - 27421563
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | |||||||||||| |||||| |||| | | |||||||| ||||||| |||||||| ||||||| ||||| ||| ||||    
T  27421449 ggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgact 27421548  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  27421549 tcaccatagaatttt 27421563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 18797414 - 18797304
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  || | ||||||||||||||||||| ||| || |||||| ||| ||  ||| |||||||| ||||||||||||| |||||||||| |    
T  18797414 tgaacttttgatgtcattgtacaaacagtggggtgttactcattacattttttatgtta--gtgttaacttcaccaaaaaagtcattctcatgacttcac 18797317  T
Q  105 catagaattttcc 117  Q
    |||||||||||||    
T  18797316 catagaattttcc 18797304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41765148 - 41765264
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||| ||||||||| ||||  |||||||||||||||| || |||||| | |||||||| ||||||  | |||| |||| |||||||||| ||||||||    
T  41765148 ggactggacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgctatagtattgactttatcagaaaagtcattctcatgact 41765247  T
Q  101 tcgccatagaattttcc 117  Q
    || |||| |||||||||    
T  41765248 tcaccatggaattttcc 41765264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 48928633 - 48928748
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||  |||||| ||||||||| || |||||| | |||||||| ||||||| | |||||| || |||||||||| ||||||||    
T  48928633 ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgact 48928732  T
Q  101 tcgccatagaattttc 116  Q
    || ||||| |||||||    
T  48928733 tcaccataaaattttc 48928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 15612829 - 15612946
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||| ||    ||||||| ||||||| ||||||||  | ||| || ||| ||||||||    
T  15612829 ggactgaacttttgatgccactctacaaacactggggtgttactca-taacactttgatgttatagtgttaacttcacaagaaacgttattctcatgact 15612927  T
Q  101 tcgccatagaattttccaa 119  Q
    || ||||||||||||||||    
T  15612928 tcaccatagaattttccaa 15612946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 31579165 - 31579255
Alignment:
Q  27 aaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||||||||||| ||| || |||||||||| ||||||| |||||||| ||||||| | ||| | |||||||| ||||||||||||||    
T  31579165 aaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaattttcc 31579255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 38258632 - 38258521
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  || | ||||||| ||| ||||||| ||| || |||||| ||| ||||||| |||||||| ||||||| ||||||| |||||||| |    
T  38258632 tgaacttttgatgtcattgtacaaacggtgtggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcac 38258533  T
Q  105 catagaattttc 116  Q
    | ||||||||||    
T  38258532 cgtagaattttc 38258521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 9355902 - 9356012
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcca 106  Q
    ||||||||||  |||| ||||||||||||||| ||  |||||| |||||| ||| ||||||| ||| |||| |||||  |||||| |||||||||| |||    
T  9355902 aacttttgatgtcactgtacaaacagtggggtattgctcactacattttttatgctatagtgttaaattcaccaaaatggtcattctcatgacttcacca 9356001  T
Q  107 tagaattttcc 117  Q
    || ||||||||    
T  9356002 taaaattttcc 9356012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 12390706 - 12390816
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcca 106  Q
    ||||||||||  ||||  |||||||||||| ||||| ||| || | |||||||| ||||||| |||||||| ||||||||||  | | |||||||| |||    
T  12390706 aacttttgatgtcactgcacaaacagtgggatgttactcattacacttttgatgttatagtgttaacttcaccaaaaaagtcgatctgatgacttcacca 12390805  T
Q  107 tagaattttcc 117  Q
    |||||||||||    
T  12390806 tagaattttcc 12390816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 25691616 - 25691729
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggt-gttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||| ||||| ||||| ||||||||||| |||  ||| |||| ||| |||||||| ||||||| ||||||||  | |||||||||| |||||||||    
T  25691616 actgaactgttgatgccactgtacaaacagtgaggtaattactcacaatacttttgatgttatagtgttaacttcacgagaaaagtcattctcatgactt 25691715  T
Q  102 cgccatagaatttt 115  Q
    | ||||| ||||||    
T  25691716 caccataaaatttt 25691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 26980414 - 26980325
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcat 90  Q
    |||||||||||||||| ||||| ||||||| ||||||||||| |||| | | |||||||| |||| || |||||||| || |||||||||    
T  26980414 ggactgaacttttgatgccactgtacaaaccgtggggtgttactcacaacacttttgatgctataatgttaacttcaccataaaagtcat 26980325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 48928366 - 48928466
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||  |||||| ||||||||| || |||||| | |||||||| ||||||| | |||||| || |||||||||| ||||||||    
T  48928366 ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgact 48928465  T
Q  101 t 101  Q
    |    
T  48928466 t 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 32432542 - 32432432
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  || | |||||||| |||||||||| |||| | |||||||||     |||| |||||||| || |||| |||||||| ||||||    
T  32432542 gactgaacttttgatgtcattgtacaaacaatggggtgttactcacaacatttttgat-----agtgttaacttcaccagaaaaatcattttcgtgactt 32432448  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  32432447 caccatagaattttcc 32432432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 34362228 - 34362335
Alignment:
Q  11 tttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccataga 110  Q
    |||||| ||||| ||||||||||||||||||| |||| | | |||||||| ||||||| ||||||    | |||||||||| |||| | ||| |||||||    
T  34362228 tttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaactttcctagaaaagtcattctcataatttcaccataga 34362327  T
Q  111 attttcca 118  Q
    ||||||||    
T  34362328 attttcca 34362335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 241024 - 241069
Alignment:
Q  72 acttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||    
T  241024 acttcaccaaaaaagtcattttcatgacttcaccatagaattttcc 241069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 8299257 - 8299192
Alignment:
Q  50 tatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaatttt 115  Q
    ||||||||||  ||||||| |||||||| || ||||||||||||| ||||||| ||||||||||||    
T  8299257 tatttttgatactatagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 8299192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 10481695 - 10481578
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtgggg-tgttattcactatatttttgatgatatagtgctaacttcatcaaaaaa-gtcattttcatgac 99  Q
    ||||||| |||||||  || | |||||||||||||| ||||| ||| ||||||||| ||| ||||||| ||||||||| |||||| |||||| || | ||    
T  10481695 gactgaatttttgatgtcattgtacaaacagtgggggtgttactcattatattttttatgttatagtgttaacttcattaaaaaaagtcattctcctaac 10481596  T
Q  100 ttcgccatagaattttcc 117  Q
    ||  ||||||||||||||    
T  10481595 tttaccatagaattttcc 10481578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 6546604 - 6546492
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcca 106  Q
    ||||||||||   ||| |||||| |||||||||||| || | | | |||||||| ||||||| ||||||||  | |||| ||||| | |||||||| |||    
T  6546604 aacttttgatgttactgtacaaatagtggggtgttactcgcaacacttttgatgctatagtgttaacttcactagaaaaatcattcttatgacttcacca 6546505  T
Q  107 tagaattttccaa 119  Q
    |||||||||||||    
T  6546504 tagaattttccaa 6546492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 23402372 - 23402420
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    |||||||| || |||||||||| ||||||||||||||||||||||||||    
T  23402372 taacttcaccagaaaagtcattctcatgacttcgccatagaattttcca 23402420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 33688333 - 33688446
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| |||||  ||||||||| || ||||| |||  | | |||||||| ||||||| |||||| | || |||||||||| |||| ||||    
T  33688333 gactgaacttttgatgccactggacaaacagtaggatgttactcataacacttttgatgttatagtgttaactt-accagaaaagtcattctcataactt 33688431  T
Q  102 cgccatagaattttc 116  Q
    | ||||| |||||||    
T  33688432 caccatataattttc 33688446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 10359285 - 10359401
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||| || ||| ||| || ||||| |||||| | |||||||| ||||    ||| || | || |||||||||| |||||||||    
T  10359285 gactgaacttttgatgtcactgtataaatagtaggatgttactcactacacttttgatgctataagattaattttaccagaaaagtcattatcatgactt 10359384  T
Q  102 cgccatagaattttcca 118  Q
    | |||||||||||||||    
T  10359385 caccatagaattttcca 10359401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29173631 - 29173541
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcatt 91  Q
    ||||||||||||||||  || | |||||||||||| |||||| |||| | | |||||||  || |||| |||||||| || ||||||||||    
T  29173631 ggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatactacagtgttaacttcaccagaaaagtcatt 29173541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 10675337 - 10675377
Alignment:
Q  74 ttcatcaaaaaagtcattttcatgacttcgccatagaattt 114  Q
    ||||||| |||||||||| |||||||||| |||||||||||    
T  10675337 ttcatcagaaaagtcattatcatgacttcaccatagaattt 10675377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 5e-31; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 26357691 - 26357575
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    ||||||||||||||  |||| ||||||||||||| ||||| |||||| | |||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  26357691 actgaacttttgatgtcactgtacaaacagtgggatgttactcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttc 26357592  T
Q  103 gccatagaattttccaa 119  Q
     ||||| ||||||||||    
T  26357591 accataaaattttccaa 26357575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 29242226 - 29242341
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| ||||| |||||||||||||||||||  |||||||||||| ||| ||||||  |||||||| |||||||  ||||||||||||||    
T  29242226 gactgaacttttgataccactgtacaaacagtggggtgttacgcactatattttttatgttatagttttaacttcaccaaaaaaaccattttcatgactt 29242325  T
Q  102 cgccatagaattttcc 117  Q
    | ||||||||||||||    
T  29242326 caccatagaattttcc 29242341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4167038 - 4166922
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||| | ||||||||||||||||||| |||| |||||||||||  |||| || |||||||| || ||||||||||||| |||||    
T  4167038 ggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatactataatgttaacttcaccagaaaagtcattttcgtgact 4166939  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  4166938 tcaccatagaattttcc 4166922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 4763745 - 4763626
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgct---aacttcatcaaaaaagtcattttcatgac 99  Q
    ||||||||||||||  |||| ||||||||||||||||||| |||||| | ||||| |||||||||| |   |||||||||| ||||||||||||||||||    
T  4763745 actgaacttttgatgtcactgtacaaacagtggggtgttactcactacagttttgttgatatagtgttgttaacttcatcagaaaagtcattttcatgac 4763646  T
Q  100 ttcgccatagaattttccaa 119  Q
    |||  |||||||||||||||    
T  4763645 ttcatcatagaattttccaa 4763626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 33551078 - 33551190
Alignment:
Q  6 gaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcc 105  Q
    |||||||||||  || | ||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||  |||||||||||| |||||||||| ||    
T  33551078 gaacttttgatgtcattgtacaaacagtggggtgttactcactacatttttgatgttatagtgttaacttcactaaaaaagtcattctcatgacttcacc 33551177  T
Q  106 atagaattttcca 118  Q
     ||||||||||||    
T  33551178 gtagaattttcca 33551190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 33660455 - 33660569
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| |||||||||| |||||||| |||| | | |||||||| ||||||| |||||| |  | |||||||||||| ||||||    
T  33660455 ggactgaacttttgatgccactgtacaaacagttgggtgttactcacaacacttttgatgttatagtgttaacttaactagaaaagtcattttaatgact 33660554  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  33660555 tcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43770926 - 43771039
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||||| || |||||||||||||||| |||| | | |||||||| ||||||| |||||||| ||||||| ||||| | ||||||    
T  43770926 ggactgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaa-tcattctaatgact 43771024  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  43771025 tcaccatagaatttt 43771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 4264165 - 4264289
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||| ||||||||||||| ||||| |||| | | |||||||| ||||||| |||||| | || |||||||||| | |||||||    
T  4264165 gactgaacttttgatgtcactgtacaaacagtgggatgttactcacaacacttttgatgctatagtgttaactttaccagaaaagtcattatgatgactt 4264264  T
Q  102 cgccatagaattttccaataattta 126  Q
    | |||||||||||||| ||| ||||    
T  4264265 caccatagaattttcctatagttta 4264289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 117
Target Start/End: Original strand, 19289416 - 19289521
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcca 106  Q
    ||||||||||  || | |||||||| |||||||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||     ||||||| |||    
T  19289416 aacttttgatgtcattgtacaaacaatggggtgttactcattatatttttgatgttatagtgttaacttcatcaaaaaagtcat-----tgacttcacca 19289510  T
Q  107 tagaattttcc 117  Q
    |||||||||||    
T  19289511 tagaattttcc 19289521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27350025 - 27350142
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaa-gtcattttcatgac 99  Q
    ||||||||||||||||  |||| ||||||||||| ||||||| |||| | |||||||||| ||||||| |||||||| |||||||  | ||||| |||||    
T  27350025 ggactgaacttttgatgtcactgtacaaacagtgtggtgttactcacaacatttttgatgctatagtgttaacttcaccaaaaaatattattttaatgac 27350124  T
Q  100 ttcgccatagaattttcc 117  Q
    ||| ||||| ||||||||    
T  27350125 ttcaccataaaattttcc 27350142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13711580 - 13711465
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||| ||||||||||  |||| ||||||| ||||||||||| |||| | | |||||||| |||| || |||||||| || |||||||||| | ||||||    
T  13711580 ggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctgatgact 13711481  T
Q  101 tcgccatagaattttc 116  Q
    || |||||||||||||    
T  13711480 tcaccatagaattttc 13711465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4478485 - 4478367
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttc-atgac 99  Q
    ||||| |||||||||| ||||| |||||||| ||| |||||| |||| | | |||||||| ||||||| |||||||| ||||||  |||||||| |||||    
T  4478485 ggactaaacttttgatgccactgtacaaacaatggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaatatcattttctatgac 4478386  T
Q  100 ttcgccatagaattttcca 118  Q
    ||| | |||||||||||||    
T  4478385 ttcactatagaattttcca 4478367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 35959002 - 35958908
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    ||||||||||||||||||  ||| || |||||| ||| |||||||  ||||||| ||||||||||||||| ||||||||  ||||||||||||||    
T  35959002 tacaaacagtggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttcatcatagaattttcca 35958908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36642102 - 36641988
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||| ||||||| || | | | |||||||| ||||||  ||| |||| || |||||||||| ||||||||    
T  36642102 ggactgaacttttgatgtcactgtacaaacagtgaggtgttactcgcaacacttttgatgctatagtattaatttcaccagaaaagtcattctcatgact 36642003  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  36642002 tcaccatagaatttt 36641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37905824 - 37905707
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||| ||||||||||| ||  || |||||| ||| ||||||| |||||||| ||||||| ||||||| || |||    
T  37905824 ggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttacattttttatgttatagtgttaacttcaccaaaaaa-tcatttttataact 37905726  T
Q  101 tcgccatagaattttccaa 119  Q
    || ||||||||||||||||    
T  37905725 tcaccatagaattttccaa 37905707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 41463941 - 41464051
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    |||||||||||| ||||| ||||||||||| ||||||| |||| | | |||||||  ||||||  |||||||| |||||| |||||| ||| |||||| |    
T  41463941 tgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttgattttatagtattaacttcaccaaaaatgtcattctcacgacttcac 41464040  T
Q  105 catagaatttt 115  Q
    |||||||||||    
T  41464041 catagaatttt 41464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 18494386 - 18494471
Alignment:
Q  32 gtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    ||||||||||| |||| | | |||||||| ||||||| |||||||| || ||||||||||||||||||||| ||| ||||||||||    
T  18494386 gtggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaattttcc 18494471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2325457 - 2325573
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||| | |||||||| |||||||||| ||| || |||| ||||| |||| || ||||||||  | ||||||||||  ||| |||    
T  2325457 ggactgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaagtcattcacataact 2325556  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  2325557 tcaccatagaattttcc 2325573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39167450 - 39167566
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||| ||||||| |||| ||| |||||||  |||  || |||||||||||||||| ||||| || |||||    
T  39167450 ggactgaacttttgatgtcattgtacaaacagtgaggtgttactcacaatacttttgatactattctgttaacttcatcaaaaaaatcattctcgtgact 39167549  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||| ||||||||    
T  39167550 tcaccataaaattttcc 39167566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 41960947 - 41960883
Alignment:
Q  53 ttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| ||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||    
T  41960947 ttttgatgttatagtgttaacttcatcaaaaaagtcatttctatgacttcaccatagaattttcc 41960883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 3177055 - 3176941
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | |||||||||| | |||||| |||  | |||||||||  ||||||  ||||||||||| ||||||||||||| | |||    
T  3177055 ggactgaacttttgatgtcattgtacaaacagttgcgtgttactcaaaacatttttgatattatagtattaacttcatcagaaaagtcattttcgtaact 3176956  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  3176955 tcaccatagaatttt 3176941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 11366471 - 11366589
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  || | |||||| |||| | ||||| ||| || |||||||||| ||||||| ||| |||| ||||||||||||| | |||| |||     
T  11366471 ctgaacttttgatgtcattatacaaatagtgagatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcattcttatgatttca 11366570  T
Q  104 ccatagaattttccaataa 122  Q
    |||||||||||||| ||||    
T  11366571 ccatagaattttcctataa 11366589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 24 - 117
Target Start/End: Original strand, 17054206 - 17054299
Alignment:
Q  24 tacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| || | ||||| | |||| |||||||||| ||||||  |||||||| |||||||||||||  ||||||||| ||||||||||||||    
T  17054206 tacaaacaatgagatgttacttactacatttttgatgttatagtattaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcc 17054299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19313968 - 19313851
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| || ||| |||  ||||||| |||| | | |||||||| |||| || |||||||| || |||||||||| | ||||||    
T  19313968 ggactgaacttttgatgtcactgtataaatagtaaggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctaatgact 19313869  T
Q  101 tcgccatagaattttcca 118  Q
    || |||||||||||||||    
T  19313868 tcaccatagaattttcca 19313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 41465572 - 41465507
Alignment:
Q  54 tttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaa 119  Q
    ||||||| ||||||| |||||||| || |||||||||| |||||||||| ||||||||||||||||    
T  41465572 tttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttccaa 41465507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 17071829 - 17071940
Alignment:
Q  6 gaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgcc 105  Q
    |||||||||||  || | |||||| | || | ||||| | |||| ||||||| || ||||||| |||||||| |||||||||||||  ||||||||| ||    
T  17071829 gaacttttgatgtcattgtacaaataatgagatgttacttactacatttttgttgttatagtgttaacttcaccaaaaaagtcattcgcatgacttcacc 17071928  T
Q  106 atagaattttcc 117  Q
    ||||||||||||    
T  17071929 atagaattttcc 17071940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33902182 - 33902067
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||||||| ||| |||||| |||||| |||   ||||| |||||||| || |||||||||| | | ||||    
T  33902182 ggactgaacttttgatgtcattttacaaacagtggggtattactcactacattttttatg--ttagtgttaacttcaccagaaaagtcattctaacgact 33902085  T
Q  101 tcgccatagaattttcca 118  Q
    ||  ||||||||||||||    
T  33902084 tcatcatagaattttcca 33902067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 43648333 - 43648415
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaa 84  Q
    |||||||||||||||  || | ||||||||||| ||||||| ||| || |||||||||| ||||||| |||||||| ||||||    
T  43648333 gactgaacttttgatgtcattatacaaacagtgaggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaa 43648415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 31570821 - 31570937
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| || ||| |||||||||||| | || | | |||| ||| ||||||| ||| |||| || |||||| ||| |||| |||    
T  31570821 ggactgaacttttgatgtcactataaaaatagtggggtgttacttacaacacttttaatgttatagtgttaatttcaccagaaaagttattctcataact 31570920  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  31570921 tcaccatagaattttcc 31570937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 44913747 - 44913660
Alignment:
Q  31 agtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaa 119  Q
    |||| ||||||| |||| | |||||||||  || |||| |||||||| || ||||||||||||| ||||||| ||||||||||||||||    
T  44913747 agtgaggtgttactcacaacatttttgatactacagtgttaacttca-cataaaagtcattttcgtgacttcaccatagaattttccaa 44913660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 31861942 - 31861891
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttccaata 121  Q
    |||||||| ||||||||||||| |||| ||||| ||||||||||||||||||    
T  31861942 taacttcaccaaaaaagtcattctcataacttcaccatagaattttccaata 31861891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 34441922 - 34441969
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||    
T  34441922 taactttaccaaaaaagtcattttcatgacttcaccatagaattttcc 34441969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 42005436 - 42005390
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttc 116  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||    
T  42005436 taacttcaccaaaaaaatcattttcatgacttcaccatagaattttc 42005390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 115
Target Start/End: Complemental strand, 41643919 - 41643874
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaatttt 115  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||    
T  41643919 taacttcaccaaaaaagtcattatcatgacttcaccatagaatttt 41643874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 18514772 - 18514820
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcca 118  Q
    |||||||||||||||||||||| |||||||||| | ||| |||||||||    
T  18514772 taacttcatcaaaaaagtcattctcatgacttcactataaaattttcca 18514820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 27139021 - 27139053
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttc 102  Q
    |||||||||||||||||||||||||||||||||    
T  27139021 taacttcatcaaaaaagtcattttcatgacttc 27139053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 6177822 - 6177775
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| || |||||||||| ||||||||||||| |||||||||||    
T  6177822 taacttcaccagaaaagtcattctcatgacttcgccgtagaattttcc 6177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 117
Target Start/End: Original strand, 43446463 - 43446510
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||||||| | ||||||||||| |||||||||| ||||||||||||||    
T  43446463 taacttcaccgaaaaagtcattctcatgacttcaccatagaattttcc 43446510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33709319 - 33709395
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttca 77  Q
    ||||||||||||||||  |||| ||| |||||||| |||||| || | | | |||||||| ||||||| ||||||||    
T  33709319 ggactgaacttttgatgtcactgtactaacagtggagtgttactcgcaacacttttgatgttatagtgttaacttca 33709395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 4318895 - 4319007
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  |||| ||||||||||||||||||| |||  | | |||||||| ||||||| |||||||| ||||||||||||| |||||||||| |    
T  4318895 tgaacttttgatgtcactgtacaaacagtggggtgttactcataacacttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 4318994  T
Q  105 catagaattttcc 117  Q
    |||||||||||||    
T  4318995 catagaattttcc 4319007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8513349 - 8513233
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  |||| ||||||||||||||||||| |||| | | |||||||  ||||||| |||||||| || |||||||||| ||||||||    
T  8513349 ggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatagtgttaacttcaccagaaaagtcattctcatgact 8513250  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  8513249 tcaccatagaattttcc 8513233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 5627504 - 5627391
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  || |||||||| |||||||||||| ||| ||||||||| ||| ||||||| |||||||| ||||||||||||| | ||||||||     
T  5627504 ctgaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttca 5627405  T
Q  104 ccatagaattttcc 117  Q
    || |||||||||||    
T  5627404 ccttagaattttcc 5627391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 1945947 - 1945833
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatc-aaaaaagtcattttcatgacttc 102  Q
    |||||||||||||  || ||||||||||||||||||||| ||| || |||||||||| ||||||| |||||||| | |||||||||||| | ||||||||    
T  1945947 ctgaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaagtcattcttatgacttc 1945848  T
Q  103 gccatagaattttcc 117  Q
     || |||||||||||    
T  1945847 accgtagaattttcc 1945833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 6089023 - 6088905
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||||| ||||| |||||||||||||| |||| |||| | | |||||||  ||||||| |||||||| || |||| ||||| |||||||||    
T  6089023 gactgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatagtgttaacttcaccagaaaaatcattctcatgactt 6088924  T
Q  102 cgccatagaattttccaat 120  Q
    | |||||||||||| ||||    
T  6088923 caccatagaatttttcaat 6088905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 29182278 - 29182165
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||| || |||||||||||||||| |||| | | |||||||| ||||||| |||||||||||| ||| ||||| |||||||||    
T  29182278 gactgaacttttgatgacactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcatcaataaaatcattctcatgactt 29182179  T
Q  102 cgccatagaatttt 115  Q
    | ||||| ||||||    
T  29182178 caccataaaatttt 29182165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 7235103 - 7235219
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    |||||||||||||||  |||  |||||||||||||||| || |||||| | |||||||| ||||||| | |||||| |  |||||||||| |||| ||||    
T  7235103 gactgaacttttgatggcaccgtacaaacagtggggtgctactcactacacttttgatgttatagtgttgacttcaccggaaaagtcattctcataactt 7235202  T
Q  102 cgccatagaattttcca 118  Q
    | |||||||||||||||    
T  7235203 caccatagaattttcca 7235219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 7055286 - 7055399
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  || |||||||| |||| ||||||| | | ||||||||| ||| ||||||| |||||||| ||||||| ||||| | ||||||||     
T  7055286 ctgaacttttgatgtcattctacaaatagtgaggtgttactaattatattttttatgttatagtgttaacttcaccaaaaaaatcattcttatgacttca 7055385  T
Q  104 ccatagaattttcc 117  Q
    ||||| ||||||||    
T  7055386 ccataaaattttcc 7055399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 18498550 - 18498433
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagt-ggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgac 99  Q
    |||||||||||||||| ||||| ||||||| || ||||||||  |||||| | |||||||| |||| || |||||||| ||  ||||||||| |||||||    
T  18498550 ggactgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaaagtcattctcatgac 18498451  T
Q  100 ttcgccatagaattttcc 117  Q
    ||| | ||||| ||||||    
T  18498450 ttcactatagatttttcc 18498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 3880011 - 3880123
Alignment:
Q  5 tgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgc 104  Q
    ||||||||||||  || | |||||||||| |||||||| |||| | | |||||||  |||| || |||||||| || |||||||||| || ||||||| |    
T  3880011 tgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactataatgttaacttcaccagaaaagtcattctcgtgacttcac 3880110  T
Q  105 catagaattttcc 117  Q
    |||||||||||||    
T  3880111 catagaattttcc 3880123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 33893070 - 33893190
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||| ||  || | |||||| |||||||||||| |||| | | |||||||| ||||||| ||||||||  |||||| | ||| | ||||||    
T  33893070 ggactgaacttttaatatcattgtacaaatagtggggtgttactcacaacacttttgatgttatagtgttaacttcactaaaaaaattattctaatgact 33893169  T
Q  101 tcgccatagaattttccaata 121  Q
    |  ||||||||||||||||||    
T  33893170 ttaccatagaattttccaata 33893190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 20768200 - 20768087
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| |||||  ||||||| |||  || || |||||| | |||||||| ||||||| | |||||| || |||||||||| ||||||||    
T  20768200 ggactgaacttttgatgccacta-acaaacaatgga-tgctactcactacacttttgatgctatagtgttgacttcaccagaaaagtcattctcatgact 20768103  T
Q  101 tcgccatagaattttc 116  Q
    || |||||||||||||    
T  20768102 tcaccatagaattttc 20768087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21017180 - 21017294
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||| | |||||| | |||||||||| |||| | |||||| ||  || | || |||||||| |||||||||||||||| |||||    
T  21017180 ggactgaacttttgatgccattgtacaaataatggggtgttactcacaacattttttatactacaatgttaacttcaccaaaaaagtcattttcgtgact 21017279  T
Q  101 tcgccatagaatttt 115  Q
    || || || ||||||    
T  21017280 tcaccgtataatttt 21017294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 30353427 - 30353540
Alignment:
Q  2 gactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||| | ||| ||||| ||||||||||| | | ||| || | | | |||||||| |||| || |||||||| || |||||||||| |||||||||    
T  30353427 gactgaactatcgatgccactgtacaaacagtgagatattactcgcaacacttttgatgttataatgttaacttcaccagaaaagtcattctcatgactt 30353526  T
Q  102 cgccatagaatttt 115  Q
    | ||||||||||||    
T  30353527 caccatagaatttt 30353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 116
Target Start/End: Original strand, 3005394 - 3005440
Alignment:
Q  70 taacttcatcaaaaaagtcattttcatgacttcgccatagaattttc 116  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||    
T  3005394 taacttcatcaaaaaagtcattctcatgacttcaacatagaattttc 3005440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 101
Target Start/End: Complemental strand, 15491728 - 15491631
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgactt 101  Q
    ||||||||||||| ||||| |||||| |||||||||||| |||| | | |||||||| || | || ||||||||  | |||||||||| |||| ||||    
T  15491728 ctgaacttttgatgccactgtacaaatagtggggtgttactcacaacacttttgatgttacaatgttaacttcacgagaaaagtcattctcataactt 15491631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 6091253 - 6091363
Alignment:
Q  3 actgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttc 102  Q
    ||||||||||||||  || | |||||||| ||| |||||| |||||| |||||| ||| || | || |||||| | ||||||| | ||||||||||||||    
T  6091253 actgaacttttgatggcattgtacaaacaatggtgtgttactcactacattttttatgttaca-tgttaactttaccaaaaaaattattttcatgacttc 6091351  T
Q  103 gccatagaattt 114  Q
     | |||||||||    
T  6091352 acaatagaattt 6091363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8003 - 7889
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||||||  || | ||||||||||||||||||| ||| || | |||||||| ||||||| |||||||||||||||||||||| | || |||    
T  8003 ggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatgttatagtgttaacttcatcaaaaaagtcattcttataact 7904  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  7903 tcaccatagaatttt 7889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 94458 - 94547
Alignment:
Q  7 aacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcat 96  Q
    |||||||||| ||||| ||||||||||||||||||| |||||| | |||||||| |||| || ||||||||||| |||||||||||||||    
T  94458 aacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttataatgttaacttcatcagaaaagtcattttcat 94547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 250 - 134
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    |||||||||||||||| ||| | |||||||||||| |||||| |||| | |||||| ||  || |||| |||||||| || ||||||||||||| |||||    
T  250 ggactgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacagtgttaacttcaccagaaaagtcattttcgtgact 151  T
Q  101 tcgccatagaattttcc 117  Q
    || ||||||||||||||    
T  150 tcaccatagaattttcc 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 408702 - 408754
Alignment:
Q  65 agtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||| |||||||| ||||||| ||||||| |||||||| ||||||||||||||    
T  408702 agtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattttcc 408754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 44073 - 43959
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||| || ||| | ||||||||  ||||||||| ||| || |||||||||  ||||| | |||||||| |||||||||| || | | ||||    
T  44073 ggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtctttcttacgact 43974  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  43973 tcaccatagaatttt 43959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 154714 - 154828
Alignment:
Q  1 ggactgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgact 100  Q
    ||||||||||||| || ||| | ||||||||  ||||||||| ||| || |||||||||  ||||| | |||||||| |||||||||| || | | ||||    
T  154714 ggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtctttcttacgact 154813  T
Q  101 tcgccatagaatttt 115  Q
    || ||||||||||||    
T  154814 tcaccatagaatttt 154828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 100886 - 100821
Alignment:
Q  52 tttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    ||||||||| ||||| | |||||||| ||||||| ||||| |||||||||| ||||||||||||||    
T  100886 tttttgatgttatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 100821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 42439 - 42348
Alignment:
Q  26 caaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcgccatagaattttcc 117  Q
    |||| |||||||||||| |||| | | |||||||| ||||||| |||||||| || |||| | ||| |||||||||| ||||| ||||||||    
T  42439 caaatagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaattttcc 42348  T

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Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 267399 - 267282
Alignment:
Q  2 gactgaacttttgattccactctacaaa-cagtggggtgttattcactatatttttgatgatatagtgctaacttcatc-aaaaaagtcattttcatgac 99  Q
    |||||||||||||||  |||| |||||| |||| || ||||| ||||||||||||||||| |||||||  ||  | | | |||||| | |||||||||||    
T  267399 gactgaacttttgatgacactgtacaaaacagttggatgttactcactatatttttgatgctatagtgtaaatattaccaaaaaaaataattttcatgac 267300  T
Q  100 ttcgccatagaattttcc 117  Q
    ||| ||||||||||||||    
T  267299 ttcaccatagaattttcc 267282  T

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Target: scaffold0022 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 146088 - 146199
Alignment:
Q  4 ctgaacttttgattccactctacaaacagtggggtgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattttcatgacttcg 103  Q
    |||||||||||||  || |||||||| | |||||||||| ||| || |||||| ||| |||| || |||||| | ||||||| ||||| | ||||||||     
T  146088 ctgaacttttgatgtcattctacaaataatggggtgttactcattacattttttatgttataatgttaacttaaccaaaaaaatcattcttatgacttca 146187  T
Q  104 ccatagaatttt 115  Q
    || |||||||||    
T  146188 ccgtagaatttt 146199  T

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Target: scaffold0318 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12025 - 11908
Alignment:
Q  1 ggactgaacttttgattccactc-tacaaacagtgggg-tgttattcactatatttttgatgatatagtgctaacttcatcaaaaaagtcattt-tcatg 97  Q
    |||||||||||||||| |||||  |||||||| ||||| ||||| |||| | | |||| ||| ||| ||| ||| |||| || ||||||||||| |||||    
T  12025 ggactgaacttttgataccactgatacaaacaatgggggtgttactcacaacacttttaatgttatggtgttaatttcaccagaaaagtcatttctcatg 11926  T
Q  98 acttcgccatagaatttt 115  Q
    ||||| ||||||||||||    
T  11925 acttcaccatagaatttt 11908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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