View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20321_low_78 (Length: 278)
Name: NF20321_low_78
Description: NF20321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20321_low_78 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 259
Target Start/End: Original strand, 48669170 - 48669421
Alignment:
| Q |
8 |
gagcagagaaggaagcaccgttcagggaaagaagattgaggaaaaaatcaagaaagaagccagtccagtagataggaatagcaaagaaagagatgaattt |
107 |
Q |
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| T |
48669170 |
gagcaaagaaggaagcaccgttaagggaaagaagattgaggaaaaaatcaagaaagaagccagtccagtagataggaatagcaaagaaagagatgaattt |
48669269 |
T |
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| Q |
108 |
gcgaacaagaatggaaacgaggatgacccatctccaactccaattgcaatcaacagatgaagatgaagaatggtcatcatcatcgacaaagcggtgaaag |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
48669270 |
gcgaacaagaatggaaacgaggatgacccatctccaactccaattgcaatcaacagatgaagatgaagaatggtcatcatcatcgacaaagcggtcaaag |
48669369 |
T |
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| Q |
208 |
tcacgaccaagaaaagcataacggaataattctacaaaaccacccttctcag |
259 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
48669370 |
tcacgaccaagaaaagcataacggaataactctacaaaaccacccttctcag |
48669421 |
T |
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