View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20321_low_87 (Length: 251)
Name: NF20321_low_87
Description: NF20321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20321_low_87 |
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Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 36809260 - 36809041
Alignment:
| Q |
13 |
aatatcaatgtgatagtatgacacaaccatacgtacgtcattatgattttccaccacaaatgacacttgattcactcatcaattcagatgtttctatttt |
112 |
Q |
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| T |
36809260 |
aatatcaatgtgatagtatgacacaaccatacgt----cattatgattttccaccacaaatgacacttgattcactcatcaattcagatgtttctatttt |
36809165 |
T |
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| Q |
113 |
ctttaaaataagtgttagaatcataatgaatactacaactcttaatgataaagagttcggtaaagtaactctccatatatgcacatcacaccagctagag |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
36809164 |
ctttaaaataagtgttagaatcataatgaatactacaactcttaatgataaaaagttgggtaaagtaactctccatatatgcacatcacaccagctagag |
36809065 |
T |
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| Q |
213 |
ctaagagtctaagacaaacaacat |
236 |
Q |
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|||||||||||||||||||||||| |
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| T |
36809064 |
ctaagagtctaagacaaacaacat |
36809041 |
T |
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