View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20322_low_2 (Length: 504)

Name: NF20322_low_2
Description: NF20322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20322_low_2
NF20322_low_2
[»] chr2 (41 HSPs)
chr2 (1-439)||(12940950-12941388)
chr2 (370-484)||(18840983-18841097)
chr2 (370-454)||(20539674-20539758)
chr2 (376-483)||(2438690-2438795)
chr2 (373-484)||(15972851-15972962)
chr2 (370-460)||(19536391-19536482)
chr2 (360-475)||(30404829-30404944)
chr2 (373-459)||(18421941-18422027)
chr2 (373-454)||(36756344-36756425)
chr2 (369-460)||(20473296-20473387)
chr2 (401-483)||(5367198-5367280)
chr2 (384-454)||(12668423-12668493)
chr2 (403-484)||(29176463-29176544)
chr2 (369-459)||(20242722-20242812)
chr2 (402-460)||(34691799-34691857)
chr2 (402-460)||(34714211-34714269)
chr2 (375-457)||(37558957-37559039)
chr2 (373-461)||(6940233-6940321)
chr2 (370-454)||(15657839-15657923)
chr2 (370-456)||(23718001-23718087)
chr2 (370-456)||(24105673-24105759)
chr2 (381-483)||(38117130-38117232)
chr2 (369-453)||(14996224-14996309)
chr2 (369-454)||(30335391-30335476)
chr2 (369-453)||(11223864-11223948)
chr2 (423-483)||(12224251-12224311)
chr2 (423-475)||(28596497-28596549)
chr2 (374-454)||(30717530-30717610)
chr2 (395-454)||(974747-974806)
chr2 (370-441)||(21616737-21616808)
chr2 (371-460)||(21624242-21624332)
chr2 (375-440)||(16069268-16069333)
chr2 (375-444)||(21374709-21374778)
chr2 (370-454)||(23058442-23058527)
chr2 (402-455)||(28677916-28677968)
chr2 (370-442)||(29663984-29664057)
chr2 (369-454)||(34784982-34785067)
chr2 (423-484)||(43585975-43586036)
chr2 (403-475)||(18570980-18571052)
chr2 (403-459)||(23921261-23921317)
chr2 (376-444)||(24894370-24894438)
[»] chr3 (53 HSPs)
chr3 (370-475)||(26492184-26492289)
chr3 (369-454)||(14216866-14216951)
chr3 (369-454)||(14222995-14223080)
chr3 (375-483)||(10954932-10955040)
chr3 (370-483)||(28917976-28918091)
chr3 (370-460)||(8383232-8383322)
chr3 (373-475)||(55401053-55401155)
chr3 (370-461)||(10335279-10335370)
chr3 (381-483)||(20503451-20503553)
chr3 (371-460)||(16000010-16000099)
chr3 (370-458)||(8587017-8587105)
chr3 (370-454)||(15796294-15796378)
chr3 (423-483)||(40993306-40993366)
chr3 (370-454)||(41961650-41961734)
chr3 (378-441)||(29112293-29112356)
chr3 (402-460)||(7928457-7928515)
chr3 (361-451)||(26508076-26508166)
chr3 (370-454)||(750618-750703)
chr3 (413-458)||(23657757-23657802)
chr3 (401-452)||(17005621-17005672)
chr3 (370-449)||(35312029-35312108)
chr3 (370-436)||(3164043-3164109)
chr3 (375-461)||(10318028-10318113)
chr3 (375-453)||(22774071-22774149)
chr3 (403-460)||(25775516-25775574)
chr3 (375-457)||(33359741-33359823)
chr3 (378-459)||(51206348-51206427)
chr3 (370-475)||(7171477-7171581)
chr3 (401-483)||(29508450-29508538)
chr3 (402-454)||(25948887-25948939)
chr3 (374-441)||(11493374-11493441)
chr3 (369-459)||(15505785-15505876)
chr3 (403-454)||(16789020-16789071)
chr3 (378-441)||(23870572-23870635)
chr3 (395-454)||(34910317-34910376)
chr3 (382-444)||(4987301-4987363)
chr3 (373-459)||(10268481-10268567)
chr3 (360-438)||(14979146-14979224)
chr3 (378-484)||(18426932-18427038)
chr3 (381-455)||(21479104-21479178)
chr3 (425-475)||(25093532-25093582)
chr3 (370-460)||(35994733-35994821)
chr3 (402-484)||(45451560-45451642)
chr3 (370-459)||(24205037-24205125)
chr3 (402-454)||(1509546-1509598)
chr3 (423-475)||(3631712-3631764)
chr3 (402-454)||(8039835-8039887)
chr3 (405-461)||(8789543-8789599)
chr3 (370-454)||(9800015-9800099)
chr3 (370-454)||(14829665-14829748)
chr3 (382-450)||(21256990-21257058)
chr3 (378-454)||(28812499-28812574)
chr3 (402-454)||(49651786-49651838)
[»] chr6 (55 HSPs)
chr6 (370-484)||(34595109-34595223)
chr6 (371-454)||(3398595-3398677)
chr6 (369-454)||(8365519-8365604)
chr6 (370-461)||(8776966-8777057)
chr6 (375-482)||(28152079-28152185)
chr6 (370-459)||(7938091-7938180)
chr6 (360-454)||(10770674-10770768)
chr6 (370-454)||(16766672-16766756)
chr6 (370-461)||(16833283-16833374)
chr6 (370-460)||(426508-426598)
chr6 (375-461)||(17841582-17841668)
chr6 (402-475)||(7265572-7265645)
chr6 (370-459)||(7977825-7977914)
chr6 (371-478)||(4877918-4878026)
chr6 (370-454)||(9107370-9107454)
chr6 (370-454)||(12696299-12696383)
chr6 (370-461)||(853852-853943)
chr6 (402-459)||(21924930-21924987)
chr6 (402-483)||(28715302-28715383)
chr6 (373-453)||(19044442-19044522)
chr6 (423-483)||(32978870-32978930)
chr6 (370-461)||(6898274-6898365)
chr6 (370-453)||(15489733-15489816)
chr6 (373-444)||(17435177-17435248)
chr6 (405-475)||(13364684-13364754)
chr6 (358-483)||(23771541-23771666)
chr6 (381-454)||(7723250-7723323)
chr6 (382-455)||(7801155-7801228)
chr6 (370-459)||(13360367-13360456)
chr6 (371-460)||(13851712-13851801)
chr6 (370-454)||(9027153-9027237)
chr6 (369-441)||(9658853-9658925)
chr6 (402-466)||(19040359-19040423)
chr6 (378-454)||(31384903-31384979)
chr6 (369-456)||(6327516-6327603)
chr6 (375-442)||(16388245-16388311)
chr6 (423-466)||(26402668-26402711)
chr6 (402-461)||(33001282-33001341)
chr6 (405-459)||(1700362-1700416)
chr6 (370-460)||(5732504-5732594)
chr6 (422-460)||(16388211-16388249)
chr6 (375-444)||(17302536-17302606)
chr6 (402-452)||(24138433-24138483)
chr6 (403-460)||(403858-403915)
chr6 (371-444)||(1681734-1681807)
chr6 (402-483)||(7377986-7378067)
chr6 (402-475)||(12627556-12627629)
chr6 (371-416)||(31563838-31563883)
chr6 (421-454)||(34197137-34197170)
chr6 (402-454)||(7996378-7996430)
chr6 (402-454)||(8022371-8022423)
chr6 (402-454)||(9025494-9025546)
chr6 (372-444)||(17341674-17341746)
chr6 (403-466)||(31579215-31579276)
chr6 (370-454)||(34073347-34073431)
[»] chr4 (41 HSPs)
chr4 (360-482)||(12797310-12797431)
chr4 (393-483)||(28964219-28964309)
chr4 (370-483)||(23292957-23293070)
chr4 (375-475)||(40179615-40179715)
chr4 (353-461)||(54580016-54580118)
chr4 (369-454)||(19482642-19482727)
chr4 (402-483)||(29205451-29205532)
chr4 (370-475)||(35157964-35158069)
chr4 (400-475)||(7377374-7377451)
chr4 (373-483)||(12895245-12895355)
chr4 (370-483)||(49431000-49431114)
chr4 (370-475)||(21945478-21945583)
chr4 (423-475)||(16073422-16073474)
chr4 (394-475)||(4157149-4157229)
chr4 (402-483)||(8423689-8423770)
chr4 (369-454)||(30838184-30838269)
chr4 (369-444)||(27706187-27706262)
chr4 (381-455)||(15029751-15029825)
chr4 (381-475)||(34306783-34306876)
chr4 (370-444)||(40481612-40481685)
chr4 (378-439)||(4383351-4383411)
chr4 (423-484)||(35161064-35161125)
chr4 (402-475)||(38846991-38847064)
chr4 (369-433)||(11651155-11651219)
chr4 (370-454)||(16303266-16303350)
chr4 (357-441)||(22440613-22440697)
chr4 (375-454)||(30298926-30299006)
chr4 (375-454)||(30327794-30327874)
chr4 (402-461)||(2361968-2362027)
chr4 (419-478)||(8402718-8402777)
chr4 (370-441)||(36635299-36635370)
chr4 (403-453)||(6863161-6863211)
chr4 (370-444)||(14126121-14126195)
chr4 (423-460)||(482232-482269)
chr4 (375-452)||(6485613-6485690)
chr4 (425-466)||(20950415-20950456)
chr4 (423-460)||(42640557-42640594)
chr4 (423-475)||(4157464-4157516)
chr4 (402-454)||(11596352-11596404)
chr4 (426-454)||(19312366-19312394)
chr4 (402-454)||(35952617-35952669)
[»] chr8 (35 HSPs)
chr8 (370-464)||(20873044-20873138)
chr8 (375-461)||(36450747-36450833)
chr8 (378-454)||(15816129-15816205)
chr8 (400-461)||(4948657-4948718)
chr8 (378-483)||(5813575-5813680)
chr8 (370-451)||(25192350-25192431)
chr8 (370-454)||(2572056-2572140)
chr8 (370-454)||(22651951-22652035)
chr8 (361-459)||(3677751-3677850)
chr8 (370-453)||(4673426-4673509)
chr8 (370-452)||(29510306-29510388)
chr8 (370-475)||(31556972-31557076)
chr8 (370-482)||(926760-926872)
chr8 (370-460)||(8343291-8343381)
chr8 (372-458)||(18170478-18170564)
chr8 (372-458)||(18634046-18634132)
chr8 (378-459)||(34897068-34897149)
chr8 (402-454)||(25566848-25566900)
chr8 (369-433)||(41838144-41838208)
chr8 (402-461)||(3025558-3025617)
chr8 (395-454)||(8342972-8343031)
chr8 (375-441)||(14134679-14134745)
chr8 (381-483)||(20679366-20679468)
chr8 (402-460)||(24613528-24613585)
chr8 (402-456)||(30077385-30077439)
chr8 (371-441)||(36934646-36934716)
chr8 (402-459)||(13844591-13844648)
chr8 (402-475)||(18407726-18407799)
chr8 (404-461)||(40332200-40332257)
chr8 (381-461)||(4786331-4786411)
chr8 (402-458)||(12606825-12606881)
chr8 (370-454)||(13436964-13437048)
chr8 (402-462)||(31236569-31236629)
chr8 (403-475)||(33405363-33405435)
chr8 (403-474)||(41831915-41831991)
[»] scaffold0053 (1 HSPs)
scaffold0053 (370-475)||(8773-8878)
[»] chr1 (54 HSPs)
chr1 (375-475)||(46348362-46348462)
chr1 (377-475)||(22515866-22515964)
chr1 (373-454)||(1486709-1486790)
chr1 (371-475)||(16927165-16927268)
chr1 (379-483)||(37598816-37598919)
chr1 (375-466)||(38078649-38078740)
chr1 (371-458)||(42359445-42359532)
chr1 (378-483)||(1815240-1815345)
chr1 (360-453)||(28273089-28273182)
chr1 (381-461)||(22881609-22881689)
chr1 (381-454)||(24577186-24577259)
chr1 (370-458)||(5927336-5927424)
chr1 (370-454)||(7918211-7918295)
chr1 (370-441)||(398778-398849)
chr1 (375-454)||(18556456-18556535)
chr1 (404-482)||(18337338-18337416)
chr1 (381-475)||(36878447-36878541)
chr1 (402-475)||(51410031-51410105)
chr1 (402-459)||(40181878-40181935)
chr1 (369-454)||(47989472-47989556)
chr1 (403-475)||(21530697-21530769)
chr1 (380-460)||(31672889-31672969)
chr1 (403-475)||(40258912-40258984)
chr1 (370-454)||(5944256-5944342)
chr1 (395-454)||(6332671-6332729)
chr1 (426-481)||(19637799-19637854)
chr1 (372-454)||(9629900-9629982)
chr1 (369-447)||(34298410-34298488)
chr1 (360-460)||(19058850-19058951)
chr1 (381-462)||(35702580-35702661)
chr1 (419-460)||(52903273-52903314)
chr1 (370-454)||(6612171-6612255)
chr1 (370-474)||(8842694-8842798)
chr1 (401-461)||(14332635-14332695)
chr1 (360-483)||(5898237-5898360)
chr1 (370-449)||(48450592-48450671)
chr1 (402-484)||(18190078-18190160)
chr1 (385-454)||(113289-113358)
chr1 (403-460)||(1864874-1864931)
chr1 (423-460)||(24334699-24334736)
chr1 (369-454)||(25272456-25272541)
chr1 (395-444)||(32434726-32434775)
chr1 (370-459)||(39130762-39130851)
chr1 (370-454)||(40917726-40917808)
chr1 (402-454)||(1704992-1705044)
chr1 (370-454)||(5376500-5376584)
chr1 (377-440)||(9033021-9033085)
chr1 (360-444)||(14359532-14359615)
chr1 (370-454)||(20157350-20157434)
chr1 (364-452)||(21378547-21378635)
chr1 (402-442)||(23531790-23531830)
chr1 (423-459)||(30749868-30749904)
chr1 (423-459)||(30771319-30771355)
chr1 (381-454)||(31694710-31694785)
[»] chr5 (42 HSPs)
chr5 (370-459)||(21191051-21191140)
chr5 (370-460)||(6247597-6247687)
chr5 (370-454)||(13287399-13287483)
chr5 (403-475)||(28588653-28588725)
chr5 (402-482)||(30502360-30502440)
chr5 (402-482)||(30542703-30542783)
chr5 (378-454)||(39698524-39698600)
chr5 (370-444)||(15405065-15405137)
chr5 (360-483)||(21576716-21576841)
chr5 (370-462)||(14422879-14422969)
chr5 (380-453)||(21351906-21351979)
chr5 (370-455)||(15382452-15382539)
chr5 (370-454)||(21522725-21522809)
chr5 (370-454)||(21533291-21533375)
chr5 (424-464)||(26312798-26312838)
chr5 (379-454)||(10298553-10298628)
chr5 (384-459)||(33178014-33178089)
chr5 (370-453)||(36642763-36642846)
chr5 (379-457)||(8420011-8420089)
chr5 (375-449)||(14674249-14674323)
chr5 (400-454)||(40131626-40131680)
chr5 (370-444)||(4105232-4105308)
chr5 (370-459)||(6326292-6326381)
chr5 (369-454)||(21542004-21542089)
chr5 (360-416)||(6072352-6072408)
chr5 (375-466)||(6770523-6770612)
chr5 (370-442)||(22013389-22013461)
chr5 (402-482)||(23012380-23012460)
chr5 (370-458)||(24906297-24906385)
chr5 (405-461)||(43564891-43564947)
chr5 (423-466)||(42029780-42029823)
chr5 (423-461)||(15884016-15884054)
chr5 (370-444)||(25863179-25863253)
chr5 (381-482)||(31084309-31084415)
chr5 (373-439)||(41995449-41995515)
chr5 (402-459)||(42893367-42893424)
chr5 (375-444)||(43001780-43001849)
chr5 (423-459)||(2548415-2548451)
chr5 (402-454)||(7677712-7677764)
chr5 (405-481)||(18421814-18421890)
chr5 (371-435)||(19552562-19552626)
chr5 (373-413)||(41558724-41558764)
[»] chr7 (40 HSPs)
chr7 (377-461)||(1401007-1401091)
chr7 (370-475)||(33994187-33994292)
chr7 (375-475)||(15680789-15680889)
chr7 (369-461)||(26733278-26733370)
chr7 (370-463)||(25481877-25481970)
chr7 (370-483)||(21864781-21864896)
chr7 (370-454)||(24339617-24339701)
chr7 (370-454)||(27945016-27945100)
chr7 (394-453)||(13300409-13300468)
chr7 (376-475)||(21880133-21880232)
chr7 (373-454)||(5409836-5409917)
chr7 (376-480)||(7197271-7197375)
chr7 (395-475)||(8234146-8234226)
chr7 (370-454)||(43027469-43027553)
chr7 (373-460)||(11061070-11061157)
chr7 (386-453)||(11665441-11665508)
chr7 (361-435)||(2034407-2034481)
chr7 (361-455)||(24105644-24105738)
chr7 (371-460)||(3721070-3721158)
chr7 (382-483)||(41020483-41020584)
chr7 (370-454)||(5235961-5236045)
chr7 (370-454)||(13770666-13770750)
chr7 (402-474)||(20549798-20549870)
chr7 (423-483)||(39138472-39138532)
chr7 (395-454)||(3991324-3991383)
chr7 (395-446)||(11831432-11831483)
chr7 (403-454)||(11890919-11890970)
chr7 (371-454)||(21140982-21141065)
chr7 (369-483)||(598182-598296)
chr7 (400-454)||(7058431-7058485)
chr7 (381-459)||(42720885-42720963)
chr7 (381-454)||(6630912-6630985)
chr7 (381-454)||(9408334-9408407)
chr7 (373-454)||(10042915-10042996)
chr7 (373-454)||(18013074-18013155)
chr7 (382-459)||(40287352-40287428)
chr7 (402-454)||(19992008-19992060)
chr7 (423-475)||(25956473-25956525)
chr7 (402-450)||(26033465-26033513)
chr7 (382-454)||(35861951-35862023)
[»] scaffold0018 (1 HSPs)
scaffold0018 (370-453)||(178819-178903)
[»] scaffold0652 (1 HSPs)
scaffold0652 (371-484)||(432-545)
[»] scaffold0223 (1 HSPs)
scaffold0223 (370-454)||(20147-20231)
[»] scaffold0050 (1 HSPs)
scaffold0050 (403-475)||(70286-70358)
[»] scaffold0003 (1 HSPs)
scaffold0003 (370-454)||(241569-241653)
[»] scaffold0122 (2 HSPs)
scaffold0122 (395-461)||(8010-8075)
scaffold0122 (370-454)||(8641-8725)
[»] scaffold0103 (1 HSPs)
scaffold0103 (375-464)||(51791-51883)
[»] scaffold0697 (1 HSPs)
scaffold0697 (403-475)||(1652-1724)
[»] scaffold0306 (1 HSPs)
scaffold0306 (375-455)||(13380-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (375-455)||(21867-21947)
[»] scaffold0027 (1 HSPs)
scaffold0027 (370-454)||(46657-46741)
[»] scaffold0361 (1 HSPs)
scaffold0361 (395-475)||(14530-14607)
[»] scaffold0246 (1 HSPs)
scaffold0246 (370-444)||(19551-19624)
[»] scaffold0011 (1 HSPs)
scaffold0011 (379-453)||(17750-17824)
[»] scaffold0171 (1 HSPs)
scaffold0171 (370-454)||(23395-23479)
[»] scaffold0083 (1 HSPs)
scaffold0083 (423-461)||(45523-45561)
[»] scaffold0049 (1 HSPs)
scaffold0049 (368-454)||(56895-56981)
[»] scaffold0722 (1 HSPs)
scaffold0722 (378-459)||(7027-7108)
[»] scaffold0021 (1 HSPs)
scaffold0021 (370-451)||(130457-130538)
[»] scaffold0008 (1 HSPs)
scaffold0008 (373-454)||(263372-263453)
[»] scaffold0450 (1 HSPs)
scaffold0450 (382-454)||(8635-8707)


Alignment Details
Target: chr2 (Bit Score: 415; Significance: 0; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 1 - 439
Target Start/End: Complemental strand, 12941388 - 12940950
Alignment:
Q  1 caaaacaagaggaacctattttttagcataaaatttctctccaatgggtctttattatttgagcacaaaactcatttttgagaatatgtttaggattttt 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941388 caaaacaagagcaacctattttttagcataaaatttctctccaatgagtctttattatttgagcacaaaactcatttttgagaatatgtttaggattttt 12941289  T
Q  101 acattattgctctctttcaaatttagcatatcatataaaattcaagcttcatttgtttttggtgattctttgctcgatgtagggaacaacaattacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941288 acattattgctctctttcaaatttagcatatcatataaaattcaagcttcatttgtttttggtgattctttgctcgatgtagggaacaacaattacatca 12941189  T
Q  201 cttcacttgccaaagcaaatcatcacccttatggaattgattttggaaaacccacaggtcgtttttgtaatggaagaaccgttgttgatgttataggtaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12941188 cttcacttgccaaagcaaatcatcacccttatggaattgattttggaaaacccacaggtcgtttttgtaatggaagaaccgttgttgatgttataggtaa 12941089  T
Q  301 gagtttgtttttcttccatcttcattatcttatcttatgtttatttttaggttataaaacacggatatagacacgacacggacactgacacgttgacata 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |    
T  12941088 gagtttgtttttcttccatcttcattatcttatcttatgtttatttttaggttataaaacacggatacagacacgacacggacactgacacgttgacaca 12940989  T
Q  401 actaataatttgaaaatgtcatataattcagtgtaatta 439  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  12940988 actaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 370 - 484
Target Start/End: Complemental strand, 18841097 - 18840983
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||  | | |||||| |||||||||| |||| |||||||| ||||||| |||| ||    
T  18841097 gacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtc 18840998  T
Q  470 cgacacagggacaca 484  Q
    |||||| ||||||||    
T  18840997 cgacaccgggacaca 18840983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 20539758 - 20539674
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||  |||||||||| |||||||||| |||| |||||||||    
T  20539758 gacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 20539674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 2438795 - 2438690
Alignment:
Q  376 acacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||||||||||| |  ||||| | |||||||||| ||||  ||| ||||||||||||||||| |||| |||||||||||||||| |||| ||||||||    
T  2438795 acacggacactgacgc--tgacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacac 2438698  T
Q  476 agggacac 483  Q
     |||||||    
T  2438697 cgggacac 2438690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 484
Target Start/End: Original strand, 15972851 - 15972962
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccga 472  Q
    ||||||||||||||||||||  |||| || ||||||||||||||  | | | ||||||||||||||| |||| |||||||||||||||| || | |||||    
T  15972851 acgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccga 15972950  T
Q  473 cacagggacaca 484  Q
    | | ||||||||    
T  15972951 cgccgggacaca 15972962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 460
Target Start/End: Complemental strand, 19536482 - 19536391
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttg-aaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||||||| |||||||  |||| ||||||||||||| ||||  ||| ||||||||||||||||| |||| |||||||||||||||    
T  19536482 gacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 475
Target Start/End: Complemental strand, 30404944 - 30404829
Alignment:
Q  360 cacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||  |||| ||||||||||||||||||  ||||    ||||||||||||||  ||| ||||||||||||||||| |||| |||| |||||||||    
T  30404944 cacggatacggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacac 30404845  T
Q  460 gatacatatccgacac 475  Q
    || |||| ||||||||    
T  30404844 gacacatgtccgacac 30404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 459
Target Start/End: Original strand, 18421941 - 18422027
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||||||||||||||  |||| || ||||||||| ||||| ||| ||||||||||||||||| |||| ||||||||| ||||    
T  18421941 acgacacggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcgaacac 18422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 454
Target Start/End: Complemental strand, 36756425 - 36756344
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||| ||||||||||||| |||| ||||||||||||||| |  | | |||||||||||||||||||||| |||||||||    
T  36756425 acgacacagacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcg 36756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 369 - 460
Target Start/End: Original strand, 20473296 - 20473387
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||| |||||| |||||||||| |  |||| |||||||||||| ||||  ||||||||||||||||||||| |||| ||| |||||||||||    
T  20473296 agactcgacacagacactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcggacacg 20473387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 483
Target Start/End: Original strand, 5367198 - 5367280
Alignment:
Q  401 actaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    |||||||||||||  |  ||| ||||||||||||||||||| || |||||||||||||||| ||||||||||| | |||||||    
T  5367198 actaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatatccgactccgggacac 5367280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 454
Target Start/End: Complemental strand, 12668493 - 12668423
Alignment:
Q  384 actgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||  ||||||||||||||||||||||  | | |||||||||||||||||||||| |||||||||    
T  12668493 actgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcg 12668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 484
Target Start/End: Complemental strand, 29176544 - 29176463
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacaca 484  Q
    |||||||||||||| |||| |||||||||||||||||||||| | ||||| |||||||  |||| |||||||| | ||||||    
T  29176544 taataatttgaaaaggtcacataattcagtgtaattataagtgttggtgttggacacggcacatgtccgacactgagacaca 29176463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 369 - 459
Target Start/End: Complemental strand, 20242812 - 20242722
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||||| |||||||||||||  |||| |||||||  ||| | ||  ||| ||||||||||||||||||| || ||||||||||||||    
T  20242812 agacacgacatggacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 20242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 34691857 - 34691799
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||||| ||  ||||||||||||||||||||||| || |||||||||||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34691799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Complemental strand, 34714269 - 34714211
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||||| ||  ||||||||||||||||||||||| || |||||||||||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 34714211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 457
Target Start/End: Original strand, 37558957 - 37559039
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggac 457  Q
    ||||||||||||||||||  |||| | ||||||||||| |||  ||| |||||||| |||||||| |||| ||||||||||||    
T  37558957 gacacggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcggac 37559039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 6940233 - 6940321
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||||||||||  |||| | |||||||||| |||| || | |||||| |||||||||| |||| ||||| || |||||||    
T  6940233 acgacacggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatccgacacga 6940321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 15657839 - 15657923
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||| |||||  |||  ||||||||||||| |||  ||| ||||||||||||||||| || | |||||||||    
T  15657839 gacacgacacggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 15657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 456
Target Start/End: Original strand, 23718001 - 23718087
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgga 456  Q
    |||| |||||||||||||||||   ||||   |||||||||||| || |||| ||||||||||||||||||| || |||||| ||||    
T  23718001 gacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtgacgga 23718087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 456
Target Start/End: Original strand, 24105673 - 24105759
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgga 456  Q
    |||| |||||||||||||||||   ||||   |||||||||||| || |||| ||||||||||||||||||| || |||||| ||||    
T  24105673 gacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtgacgga 24105759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 483
Target Start/End: Complemental strand, 38117232 - 38117130
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacaggga 480  Q
    ||||||||||||  |||| | |||||||||||||||  ||| ||| ||| ||||||||| |||| | |||||||||||| | || | |||||||| ||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcggacacaacacgtgtccgacaccggga 38117133  T
Q  481 cac 483  Q
    |||    
T  38117132 cac 38117130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 453
Target Start/End: Complemental strand, 14996309 - 14996224
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttg-aaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    ||||| |||||||||||||||| |  |||| | ||||||||||| ||||  |||||||||| |||||||||| |||| ||||||||    
T  14996309 agacatgacacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 30335391 - 30335476
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||  ||||  |||| |||||||||||||||||  | | |||||| |||||||||| || | |||||||||    
T  30335391 agacacgacacggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 453
Target Start/End: Complemental strand, 11223948 - 11223864
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    ||||| |||| |||||| |||||| ||||| | |||||| ||||||||  | | ||||||||||||||||| |||| ||||||||    
T  11223948 agacatgacatggacacagacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 12224251 - 12224311
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    ||||| || |||||||| |||| ||||||||||||||||||| | |||||||| |||||||    
T  12224251 ataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgtccgacactgggacac 12224311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 475
Target Start/End: Original strand, 28596497 - 28596549
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||| ||||||||||||||||| |||||||||||||||| || | ||||||||    
T  28596497 ataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacac 28596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 454
Target Start/End: Complemental strand, 30717610 - 30717530
Alignment:
Q  374 cgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||    |||| | |||||||||||||||  ||| ||||||||||||||||| |||| ||| |||||    
T  30717610 cgacacggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 974747 - 974806
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||| |||||||||||||||||  ||| || |||||||||||||| |||| |||||||||    
T  974747 gacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcg 974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 21616737 - 21616808
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    |||||||||||||||| ||||||  ||||   |||||||||||| ||  ||| |||||||||||||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 21616808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 460
Target Start/End: Original strand, 21624242 - 21624332
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcat-ataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||| ||||||||||||  |||| | |||||||||| ||||    |  ||||||||||||||||| |||| |||||||||||||||    
T  21624242 acacgacacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcggacacg 21624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 440
Target Start/End: Complemental strand, 16069333 - 16069268
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattat 440  Q
    ||||||||||||||||||  ||||    ||||||||| ||||  ||||||||||||||||||||||    
T  16069333 gacacggacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 444
Target Start/End: Complemental strand, 21374778 - 21374709
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||||| |||||  |||| | |||||||||||||||  | | ||||||||||||||||| ||||    
T  21374778 gacacggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagt 21374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 23058527 - 23058442
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttg-aaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||| |||||||   ||| || |||||||||| ||||  ||| ||||| ||||||||||| |||| |||||||||    
T  23058527 gacacgacacggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtcg 23058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 28677916 - 28677968
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgg 455  Q
    |||||||||||||||  ||| ||||||||||||||||||| || ||||||||||    
T  28677916 ctaataatttgaaaaaatcacataattcagtgtaattatatgt-tcggtgtcgg 28677968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 29663984 - 29664057
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgt-catataattcagtgtaattataa 442  Q
    |||||||||| |||||||||| || ||||   |||||||||||||||  |  ||||||||||||||||||||||    
T  29663984 gacacgacacagacactgacatgtcgacagtgctaataatttgaaaaaatatatataattcagtgtaattataa 29664057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 454
Target Start/End: Complemental strand, 34785067 - 34784982
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||   |||| |||||||  ||| | ||  ||| |||||| |||||||||||| || |||||||||    
T  34785067 agacacgacacggacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcg 34784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 484
Target Start/End: Complemental strand, 43586036 - 43585975
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacaca 484  Q
    |||||||| |||||| | |||| ||||||||||||||||||| | || |||||| |||||||    
T  43586036 ataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcagacacatggacaca 43585975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 475
Target Start/End: Original strand, 18570980 - 18571052
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||| ||  | | |||||||| |||||| ||| || || |||||| ||||||||||||||||||||    
T  18570980 taataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgaacacgatacatatccgacac 18571052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 459
Target Start/End: Original strand, 23921261 - 23921317
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||||| ||  | | |||||||||||||||||||| ||| ||||||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaattataaatattggtgtcggacac 23921317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 376 - 444
Target Start/End: Original strand, 24894370 - 24894438
Alignment:
Q  376 acacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||||||||||  |||| | |||||||||| ||||  ||| ||||||||||| ||||| ||||    
T  24894370 acacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagt 24894438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 370 - 475
Target Start/End: Complemental strand, 26492289 - 26492184
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    |||||||||||||||||||||||  |||| | |||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||| |||| ||    
T  26492289 gacacgacacggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacacatgtc 26492190  T
Q  470 cgacac 475  Q
     |||||    
T  26492189 tgacac 26492184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 14216866 - 14216951
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||| |||| || ||||||    
T  14216866 agacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcg 14216951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 14222995 - 14223080
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||||||||| |||| |||||||||||| ||||| ||||||||||||||||||||| |||| || ||||||    
T  14222995 agacacgacacggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcg 14223080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 375 - 483
Target Start/End: Original strand, 10954932 - 10955040
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgaca 474  Q
    |||||| |||||||||||  |||| |||||||||||||||||  ||| ||||||||||||||| | |||| |||||||||||||||| || | |||||||    
T  10954932 gacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgaca 10955031  T
Q  475 cagggacac 483  Q
    | |||||||    
T  10955032 ctgggacac 10955040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 370 - 483
Target Start/End: Original strand, 28917976 - 28918091
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc--ggacacgatacata 467  Q
    ||||||||||||| |||||||||  |||||| |||||||||||||||  ||| ||||||||||||||||| |||| ||||||||  |||||||| || |     
T  28917976 gacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtg 28918075  T
Q  468 tccgacacagggacac 483  Q
    |||||||| |||||||    
T  28918076 tccgacactgggacac 28918091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 370 - 460
Target Start/End: Original strand, 8383232 - 8383322
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||||||| |||||||  ||||   |||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||||    
T  8383232 gacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 475
Target Start/End: Original strand, 55401053 - 55401155
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccga 472  Q
    |||||||||||||||| |||  |||| |||||||||||||||||  ||| |||||| |||||||||| |||| |||||||||||||||| || | |||||    
T  55401053 acgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccga 55401152  T
Q  473 cac 475  Q
    |||    
T  55401153 cac 55401155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 370 - 461
Target Start/End: Complemental strand, 10335370 - 10335279
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||| |||| ||| || ||||||| || |||| |||||||||| |||||    
T  10335370 gacacgacacggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcgggcacga 10335279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 483
Target Start/End: Original strand, 20503451 - 20503553
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacaggga 480  Q
    ||||||||||||  |||| ||| |||||||||||||  | | ||||||||||||||||| |||| ||||||| |||||||| |||| || ||||| ||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccggga 20503550  T
Q  481 cac 483  Q
    |||    
T  20503551 cac 20503553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 460
Target Start/End: Complemental strand, 16000099 - 16000010
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||| ||||||||||||  |||| |||||||||||| ||||  | | |||||||||||||| || |||| |||||||||||||||    
T  16000099 acacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcggacacg 16000010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 458
Target Start/End: Complemental strand, 8587105 - 8587017
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggaca 458  Q
    |||| ||||||||||||||||||  |||| | ||| |||||||||||  ||| |||||| |||||||||| |||| |||||||||||||    
T  8587105 gacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcggaca 8587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 15796378 - 15796294
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||| |||||||  |||| |  ||||||||||||||  ||||||||||||||||||||| || | |||||||||    
T  15796378 gacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcg 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 40993366 - 40993306
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    ||||||||||||||||||| || |||||||||||||||| |||| |||||||| |||||||    
T  40993366 ataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacac 40993306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 41961734 - 41961650
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||| ||||||||||||  | || |||||||||||||||||| ||| || |||| ||||||||| |||| |||||||||    
T  41961734 gacacgacacagacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcg 41961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 441
Target Start/End: Complemental strand, 29112356 - 29112293
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    |||||||||||||||||||||  |||||| |||||| ||  |||||||||||||||||||||||    
T  29112356 acggacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 29112293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 7928457 - 7928515
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||||||||  ||| ||||||||||||||||||| || |||||||||||||||    
T  7928457 ctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 361 - 451
Target Start/End: Original strand, 26508076 - 26508166
Alignment:
Q  361 acggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtg 451  Q
    |||||||  ||||||| || || ||||||||| ||||| | |||||||||||||||  ||| ||||||||||||||||| |||| ||||||    
T  26508076 acggatacggacacgatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 750703 - 750618
Alignment:
Q  370 gacacgacacggacact-gacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||| ||||||  |||| |||||||||||||||||| ||| |||||||  || ||||| |||| |||||||||    
T  750703 gacacgacacggacacttgacacggcgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcg 750618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 413 - 458
Target Start/End: Original strand, 23657757 - 23657802
Alignment:
Q  413 aaaatgtcatataattcagtgtaattataagtatcggtgtcggaca 458  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  23657757 aaaatatcatataattcagtgtaattataaatatcggtgtcggaca 23657802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 452
Target Start/End: Complemental strand, 17005672 - 17005621
Alignment:
Q  401 actaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgt 452  Q
    ||||||||||||| ||  |||||||||||||||||||||||||| |||||||    
T  17005672 actaataatttgataaaatcatataattcagtgtaattataagtgtcggtgt 17005621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 449
Target Start/End: Original strand, 35312029 - 35312108
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcgg 449  Q
    ||||||||||||||||||| | || |||| |  ||||||||| ||||||| | ||||||||||||||||| |||| ||||    
T  35312029 gacacgacacggacactgatatgtcgacacatttaataatttaaaaatgttacataattcagtgtaattacaagtgtcgg 35312108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 3164109 - 3164043
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaa 436  Q
    ||||||||||||||| || ||||| |||| | |||||||||||||||  ||| ||||||||||||||    
T  3164109 gacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 461
Target Start/End: Complemental strand, 10318113 - 10318028
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||||||||  |||| | ||||||||||||||| |||| ||  || ||||||| ||||||| |||||||||| |||||    
T  10318113 gacacggacactgacacgccgacacagctaataatttgaaaaagtcacat-ttttagtgtaaatataagtgtcggtgtcgggcacga 10318028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 453
Target Start/End: Complemental strand, 22774149 - 22774071
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    ||||| ||||| ||||||| ||||  |||||||||| || || |||| ||| |||||||||||||||||| ||||||||    
T  22774149 gacacagacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcggtgtc 22774071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 460
Target Start/End: Original strand, 25775516 - 25775574
Alignment:
Q  403 taataatttgaaaatg-tcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||    
T  25775516 taataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcggacacg 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 457
Target Start/End: Original strand, 33359741 - 33359823
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggac 457  Q
    ||||| |||||||||||| ||||| | ||||||||||||||| |||| ||| || ||||||| || |||| || |||||||||    
T  33359741 gacacagacactgacacgctgacacagctaataatttgaaaaggtcacatattttagtgtaaatacaagtgtcagtgtcggac 33359823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 51206427 - 51206348
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||| |||||  ||||| | |||||||||||||||  ||| |||||||||||||| || |||| ||||||||||||||    
T  51206427 acggacacggacac--tgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 475
Target Start/End: Original strand, 7171477 - 7171581
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    ||||||||||||| ||||||| |  |||| | ||  |||||||||||  ||||||||||| ||||||||| |||| | |||||||||||||| || | ||    
T  7171477 gacacgacacggatactgacatgccgacacagcttgtaatttgaaaaa-tcatataattcggtgtaattacaagtgttggtgtcggacacgacacgtgtc 7171575  T
Q  470 cgacac 475  Q
    ||||||    
T  7171576 cgacac 7171581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 483
Target Start/End: Original strand, 29508450 - 29508538
Alignment:
Q  401 actaataatttgaaaatgtcatataattcagtgtaattataagtatc------ggtgtcggacacgatacatatccgacacagggacac 483  Q
    ||||||||||||||||  ||||||||||||||||||||||| || ||      |||||||||||||| |||  |||||||| |||||||    
T  29508450 actaataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacac 29508538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 25948939 - 25948887
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||  ||| |||||||||||||||||||||| | |||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcg 25948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 441
Target Start/End: Complemental strand, 11493441 - 11493374
Alignment:
Q  374 cgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    ||||||||||| |||||||| ||||  ||||||||| ||| ||  ||| |||||||||||||||||||    
T  11493441 cgacacggacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattata 11493374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 459
Target Start/End: Complemental strand, 15505876 - 15505785
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatg-tcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||||  || || |||||||||| | || ||||||||| ||||   | |||||||||||||||||||||||| | ||||||||||||    
T  15505876 agacacgacatagatacagacacgttgatacaattaataatttaaaaaaaattatataattcagtgtaattataagtgttggtgtcggacac 15505785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Original strand, 16789020 - 16789071
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||| ||||  |||||||||||||||||||||||||| | |||||||    
T  16789020 taataatttaaaaaaatcatataattcagtgtaattataagtgttggtgtcg 16789071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 441
Target Start/End: Complemental strand, 23870635 - 23870572
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    |||||||| ||||||| ||||   |||||||||||||||  |||||||||||||||| ||||||    
T  23870635 acggacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgtgattata 23870572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 34910317 - 34910376
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||| |||||||||||||||||  ||| ||||||||||||||||| |||  |||||||||    
T  34910317 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcg 34910376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 382 - 444
Target Start/End: Complemental strand, 4987363 - 4987301
Alignment:
Q  382 acactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||||  |||| | |||||||||||||||  ||| ||||||||||||||||| ||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt 4987301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 459
Target Start/End: Complemental strand, 10268567 - 10268481
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||| |||||||||||||  |||| |  ||||||||||||||  ||| |||||| |||||||||| |||| || ||||| |||||    
T  10268567 acgacatggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcagacac 10268481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 14979146 - 14979224
Alignment:
Q  360 cacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaatt 438  Q
    ||||||||  ||||||||| ||||| || ||||  |||| | |||||||||||||||  ||| ||||||||||||||||    
T  14979146 cacggatacggacacgacaaggacaatggcacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 484
Target Start/End: Original strand, 18426932 - 18427038
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacag 477  Q
    |||||||| ||||||  ||||  ||||||||||| ||||  ||| ||||||| |||||||||||  | ||||||||||| |||| || | |||| ||| |    
T  18426932 acggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgtcggatacgacacgtgtccggcaccg 18427031  T
Q  478 ggacaca 484  Q
    |||||||    
T  18427032 ggacaca 18427038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 455
Target Start/End: Original strand, 21479104 - 21479178
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgg 455  Q
    ||||||||||||  |||| | |||||||||||||||  ||| | |||||||||||||||  ||| ||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcgg 21479178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 425 - 475
Target Start/End: Original strand, 25093532 - 25093582
Alignment:
Q  425 aattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||||||||| || |||||||||||||| | |||| ||||||||    
T  25093532 aattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgacac 25093582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 460
Target Start/End: Complemental strand, 35994821 - 35994733
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||| ||||| ||||| |  |||| | |||||||||||||||  ||| ||||||||||||||||| |||| || ||||||||||||    
T  35994821 gacacgacatggacaatgacaagccgacacagctaataatttgaaaa-atcacataattcagtgtaattacaagtgtc-gtgtcggacacg 35994733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 484
Target Start/End: Original strand, 45451560 - 45451642
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacaca 484  Q
    |||||||||||| ||  ||| ||| |||||| |||| ||| || |||||||||||||||| |||| |||||||| | ||||||    
T  45451560 ctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacacatgtccgacaccgagacaca 45451642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 459
Target Start/End: Complemental strand, 24205125 - 24205037
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||||||||||||||||||  ||||    ||||||||||| ||  | | ||||| |||||||||||||||| || |||||||||||    
T  24205125 gacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtc-gtgtcggacac 24205037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 1509546 - 1509598
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||  ||| |||||| |||||||||| |||| |||||||||    
T  1509546 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 1509598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 475
Target Start/End: Original strand, 3631712 - 3631764
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||||||||||| ||  | ||||||||||||| |||| ||||||||    
T  3631712 ataattcagtgtaattatatgtgccagtgtcggacacgacacatgtccgacac 3631764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 8039887 - 8039835
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||| ||  | ||||||||||||||||||||| || |||||||||    
T  8039887 ctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcg 8039835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 8789599 - 8789543
Alignment:
Q  405 ataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||| ||  ||| ||||||| ||||||||||| || ||||||||||||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacga 8789543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 9800015 - 9800099
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||| |||||||||||  ||||   |||||||||||| ||  | | ||||||| |||||||| ||||| |||||||||    
T  9800015 gacacgacacgtacactgacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcg 9800099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 14829665 - 14829748
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||| ||||| ||||||||||||  |||| | |||||||||||||||  ||| ||||||||  ||||||| |||| |||||||||    
T  14829665 gacatgacacagacactgacacgccgacacagctaataatttgaaaa-atcacataattcatggtaattacaagtgtcggtgtcg 14829748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 450
Target Start/End: Complemental strand, 21257058 - 21256990
Alignment:
Q  382 acactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggt 450  Q
    |||| |||||| ||||| | |||||||||||||||  ||| |||||||||| |||||| |||| |||||    
T  21257058 acaccgacacgatgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggt 21256990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 28812499 - 28812574
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||| ||||||  |||| ||||||||||||||| |  ||| ||||||||||||| ||| |||| |||||||||    
T  28812499 acggacac-gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 28812574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 49651838 - 49651786
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||  ||| |||||||| |||||||| |||| |||||||||    
T  49651838 ctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 370 - 484
Target Start/End: Original strand, 34595109 - 34595223
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    ||||||||||||||| |||||||  |||| |||||||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||| || | ||    
T  34595109 gacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtc 34595208  T
Q  470 cgacacagggacaca 484  Q
     ||||| ||||||||    
T  34595209 tgacaccgggacaca 34595223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 371 - 454
Target Start/End: Original strand, 3398595 - 3398677
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||||||  |||| | |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  3398595 acacgacacggacactgacacgccgacacagctaataatttgaaaaa-tcatataattcagtgtaattataagtatcggtgtcg 3398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 369 - 454
Target Start/End: Complemental strand, 8365604 - 8365519
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||||||||  |||| |||||||||||||||||| ||| ||||||| ||||||||| |||| |||||||||    
T  8365604 agacacgacacggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcg 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 461
Target Start/End: Complemental strand, 8777057 - 8776966
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||  ||| | ||||||||||||||| |||| | ||||||||||||||    
T  8777057 gacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacga 8776966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 375 - 482
Target Start/End: Original strand, 28152079 - 28152185
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgaca 474  Q
    ||||||||||||||||||  |||| | |||||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||| || | |||||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 28152177  T
Q  475 cagggaca 482  Q
    | ||||||    
T  28152178 ccgggaca 28152185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 459
Target Start/End: Original strand, 7938091 - 7938180
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||| |||||||||||||  |||| | |||||||||||||||  |||||||||| ||||||||||||||| |||||||| |||||    
T  7938091 gacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccgacac 7938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 454
Target Start/End: Complemental strand, 10770768 - 10770674
Alignment:
Q  360 cacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||  ||||||||| |||||||||||||   ||| |||||||||||||||||  ||| ||||||||||||||||| |||| |||||||||    
T  10770768 cacggatacggacacgacatggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 16766672 - 16766756
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||| |||||||||||||  |||| | |||||||||||||||  ||| ||||||||||||||||| |||| |||||||||    
T  16766672 gacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 370 - 461
Target Start/End: Original strand, 16833283 - 16833374
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||| ||||||||||||  |||| |||||||||||||||||  ||| ||| ||||||||||||| |||| |||||||  |||||||    
T  16833283 gacacgacacagacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgttagacacga 16833374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 460
Target Start/End: Complemental strand, 426598 - 426508
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||||||||||||||||  |||| |  ||||||||||||||  ||| |||||| | |||||||| |||| |||||||||||||||    
T  426598 gacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 375 - 461
Target Start/End: Complemental strand, 17841668 - 17841582
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||||||||  |||| | |||||||||||||||  ||| |||||| |||||||||| ||||  |||||||||||||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacga 17841582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 7265645 - 7265572
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||||||||| ||  ||| ||||||||||||||||||| || |||||||||||||| |||||| ||||||||    
T  7265645 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacac 7265572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 459
Target Start/End: Complemental strand, 7977914 - 7977825
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||| ||| |||||||||  |||| | |||||||||||||||  | | ||||||||||||||||| |||| ||||||||||||||    
T  7977914 gacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 478
Target Start/End: Original strand, 4877918 - 4878026
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaat-gtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    |||||||||||| | ||||||   |||| | |||||||||||||||  |||| |||||| ||| |||||| |||| |||||||||||||||| |||| ||    
T  4877918 acacgacacggatagtgacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtcggacacgacacatgtc 4878017  T
Q  470 cgacacagg 478  Q
    |||||||||    
T  4878018 cgacacagg 4878026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 9107454 - 9107370
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||| |||||  |||| | |||||||||||||||  ||| | ||||||||||||||| |||| |||||||||    
T  9107454 gacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 12696299 - 12696383
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||  |||| | |||||||||||||||  | | ||||||||||||||||| |||| || ||||||    
T  12696299 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcg 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 461
Target Start/End: Complemental strand, 853943 - 853852
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||||||  ||||||||  |||| |||||||||||||||||  ||| |||||| |||| ||||| |||| ||||||||||| ||||    
T  853943 gacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcggatacga 853852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 459
Target Start/End: Complemental strand, 21924987 - 21924930
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||||||| ||| ||| ||||||||||||||||||| || ||||||||||||||    
T  21924987 ctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 483
Target Start/End: Original strand, 28715302 - 28715383
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    |||||||||||||||  | | ||||||||||||||||| |||| |||||||||||||||| || | | |||||| |||||||    
T  28715302 ctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacac 28715383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 453
Target Start/End: Original strand, 19044442 - 19044522
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    |||||| |||||||||||||  ||||  ||||||||||||| ||| ||| |||||||||||| |||||| || ||||||||    
T  19044442 acgacatggacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 32978930 - 32978870
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    |||||| |||||||||| |||| |||||||||||||||| |||| |||||||| |||||||    
T  32978930 ataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacac 32978870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 461
Target Start/End: Complemental strand, 6898365 - 6898274
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||| | ||||||||||||| |||||   ||||||||||||| |  | | |||||| |||||||||| |||| ||||||||||||||||    
T  6898365 gacacgatatggacactgacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcggtgtcggacacga 6898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 15489816 - 15489733
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    ||||| ||||||||||| |||||| |||| |||||||||||||||||  | | | |||||| |||||||| |||| ||||||||    
T  15489816 gacacaacacggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 444
Target Start/End: Original strand, 17435177 - 17435248
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||||||||| |||| |||||| |||||||||| ||||  | | ||||||||||||||||| ||||    
T  17435177 acgacacggacactgatacgtcgacatagctaataattttaaaaaattacataattcagtgtaattacaagt 17435248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 475
Target Start/End: Complemental strand, 13364754 - 13364684
Alignment:
Q  405 ataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||| ||  ||||||||||||||||||| ||| || ||||||| ||||||||||||| || |||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgttggacacgatacatgtctgacac 13364684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 483
Target Start/End: Original strand, 23771541 - 23771666
Alignment:
Q  358 aacacggatat-agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgga 456  Q
    ||||||||||| ||||| ||||||||||| ||||||  |||| |  ||||||||| ||||  | ||||| ||||||||||||| || | |||||||||||    
T  23771541 aacacggatattagacatgacacggacacggacacgccgacacagttaataatttaaaaaatt-atatacttcagtgtaattacaaatgtcggtgtcgga 23771639  T
Q  457 cacgatacatatccgacacagggacac 483  Q
    ||||| |  | |||||||||| |||||    
T  23771640 cacgacatgtgtccgacacagagacac 23771666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 7723323 - 7723250
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||| ||||   |||||||||||| ||  |||||||||||||  |||||||| ||||||||||||    
T  7723323 gacactgacacgtggacactgctaataatttgagaaaatcatataattcagcataattatatgtatcggtgtcg 7723250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 455
Target Start/End: Complemental strand, 7801228 - 7801155
Alignment:
Q  382 acactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgg 455  Q
    ||||| |||||  |||| |||||||||||||||||  ||| ||||||||| ||||||| |||| ||||||||||    
T  7801228 acactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 7801155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 459
Target Start/End: Complemental strand, 13360456 - 13360367
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||| ||| |||| ||||||| ||||  |||| |||||||| ||  ||| ||||||||||||||||||| || |||||||| |||||    
T  13360456 gacacgatacgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgtttcggtgtcagacac 13360367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 460
Target Start/End: Original strand, 13851712 - 13851801
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||||||||||||||| ||||   |||||||||||| ||  | |  |||||||||||||||||| || ||| |||| ||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 13851801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 9027153 - 9027237
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||  ||||   |||||||||||| |   ||| ||||||| ||||||||||| || |||||||||    
T  9027153 gacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtcg 9027237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 441
Target Start/End: Original strand, 9658853 - 9658925
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    ||||||||||||||||||||||||  ||||   |||||||||| | ||  ||| |||||||||||||||||||    
T  9658853 agacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 19040359 - 19040423
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacat 466  Q
    |||||||||||| ||  ||| ||||||||||||||||||| || || ||||||||||||| ||||    
T  19040359 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacacat 19040423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 31384903 - 31384979
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||| |||| || ||||| | |||||||||||||||||  ||| ||||||||||||||||| |||| || ||||||    
T  31384903 acggatactggcatgttgatacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 31384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 456
Target Start/End: Complemental strand, 6327603 - 6327516
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgga 456  Q
    ||||||||||  |||||| |||  ||||||||  ||||||||||||||  | |||||||| |||||||||| |||| ||| |||||||    
T  6327603 agacacgacaaagacacttacattttgacatagttaataatttgaaaaaattatataattaagtgtaattacaagtgtcgatgtcgga 6327516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 442
Target Start/End: Complemental strand, 16388311 - 16388245
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataa 442  Q
    ||||||||||||||||||| || | | | |||||||||||||  ||| ||||||||||||||||||||    
T  16388311 gacacggacactgacacgtcgata-agcaaataatttgaaaaaatcacataattcagtgtaattataa 16388245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 26402711 - 26402668
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacat 466  Q
    ||||||||||||||| | |||| |||||||||||||||||||||    
T  26402711 ataattcagtgtaatcacaagtgtcggtgtcggacacgatacat 26402668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 33001341 - 33001282
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||||||||  ||| |||||| | |||||||||| || ||||||||||||||||    
T  33001341 ctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacga 33001282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 405 - 459
Target Start/End: Original strand, 1700362 - 1700416
Alignment:
Q  405 ataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||| ||||  ||| ||| |||||||||||||||||| ||||||||||||||    
T  1700362 ataatttaaaaaaatcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 460
Target Start/End: Complemental strand, 5732594 - 5732504
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||| |||||||||||||  ||||    ||||||||||| ||  ||| ||| || |||||||||||| || |||||||||||||||    
T  5732594 gacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacg 5732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 422 - 460
Target Start/End: Complemental strand, 16388249 - 16388211
Alignment:
Q  422 tataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  16388249 tataattcagtgtaattacaagtgtcggtgtcggacacg 16388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 444
Target Start/End: Original strand, 17302536 - 17302606
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttg-aaaatgtcatataattcagtgtaattataagt 444  Q
    |||||| ||||||||||| ||||| ||||||||||||| ||||  ||| |||||||| |||||||| ||||    
T  17302536 gacacgaacactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagt 17302606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 452
Target Start/End: Original strand, 24138433 - 24138483
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgt 452  Q
    |||||||||||||||  |||||||||| |||||| ||||| ||||||||||    
T  24138433 ctaataatttgaaaaaatcatataattaagtgtatttatatgtatcggtgt 24138483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 403915 - 403858
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||||||  ||| |||||| ||||||| || |||| |||||||||||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcggacacg 403858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 1681734 - 1681807
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||  ||||| |||||  |||| |||||||||||||||||  |||  |||||||||||||||| ||||    
T  1681734 acacgacacatacactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagt 1681807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 483
Target Start/End: Original strand, 7377986 - 7378067
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    |||| ||||||| ||  ||| |||||||| |||||||||| || |||||||||||||||| |   ||||||||| |||||||    
T  7377986 ctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgacatgcatccgacaccgggacac 7378067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 12627629 - 12627556
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||||| ||||||  ||| ||||||||||||||| ||| || ||| |||||||||| | |||| ||||||||    
T  12627629 ctaataatgtgaaaaaatcacataattcagtgtaataatatgtgtcgatgtcggacaccacacatgtccgacac 12627556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 416
Target Start/End: Complemental strand, 31563883 - 31563838
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaa 416  Q
    |||||||||| ||||||||| |||||||| | ||||||||||||||    
T  31563883 acacgacacgtacactgacatgttgacatcagtaataatttgaaaa 31563838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 454
Target Start/End: Original strand, 34197137 - 34197170
Alignment:
Q  421 atataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||| |||||||||    
T  34197137 atataattcagtgtaattataagtgtcggtgtcg 34197170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 7996430 - 7996378
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||| ||  ||||||||||||||||||||||| |  |||||||||    
T  7996430 ctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 7996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 8022371 - 8022423
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||| ||  ||||||||||||||||||||||| |  |||||||||    
T  8022371 ctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtcg 8022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 9025546 - 9025494
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||| ||  ||| ||||||||||||||||||| || |||||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 17341746 - 17341674
Alignment:
Q  372 cacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||| ||||||||||  ||||    ||||||||||| ||  ||| ||||||||||||||||||||||    
T  17341746 cacgacacgggcactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagt 17341674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 31579276 - 31579215
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacat 466  Q
    ||||||||||| ||  ||| ||||||||||||||||||  || |||||||||||||||| ||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattat--gtgtcggtgtcggacacgacacat 31579215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 34073431 - 34073347
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||||| |   ||||  |||||||||||| ||  ||  ||||||||||||||||||| |  |||||||||    
T  34073431 gacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcg 34073347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 360 - 482
Target Start/End: Complemental strand, 12797431 - 12797310
Alignment:
Q  360 cacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||  || ||||||||||||||||||||  | || |||||||||||||||||  ||| ||||||||||||||||| |||| ||||||||||||||    
T  12797431 cacggatacggatacgacacggacactgacacgccggcaaaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtcggacac 12797333  T
Q  460 gatacatatccgacacagggaca 482  Q
    ||||||| || ||||| ||||||    
T  12797332 gatacatgtctgacaccgggaca 12797310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 393 - 483
Target Start/End: Complemental strand, 28964309 - 28964219
Alignment:
Q  393 ttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    |||||||| |||||||||||||||  ||| ||||||||||||||||| |||| || ||||||||||||| ||||||||||||| |||||||    
T  28964309 ttgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacac 28964219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 370 - 483
Target Start/End: Complemental strand, 23293070 - 23292957
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    ||||||||||||||| |||||||  |||| | |||||||||||||||  ||| |||||||||| |||||| |||| |||||||||||||||| || | ||    
T  23293070 gacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtc 23292971  T
Q  470 cgacacagggacac 483  Q
    |||||| |||||||    
T  23292970 cgacaccgggacac 23292957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 375 - 475
Target Start/End: Complemental strand, 40179715 - 40179615
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgaca 474  Q
    ||||||||||||||||||||||||  | ||||| ||||||||  ||| ||||||||||||||||||| |  |||||||||||||||| |||| | |||||    
T  40179715 gacacggacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacacgacacatgttcgaca 40179616  T
Q  475 c 475  Q
    |    
T  40179615 c 40179615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 353 - 461
Target Start/End: Complemental strand, 54580118 - 54580016
Alignment:
Q  353 tataaaacacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgt 452  Q
    ||||||||||||||| ||||||    ||||||| ||| |  ||||| |||||||||||||||||  ||| |||||||||||||||||||||| |||||||    
T  54580118 tataaaacacggatacagacac----cggacacggacgc--tgacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 54580025  T
Q  453 cggacacga 461  Q
    |||||||||    
T  54580024 cggacacga 54580016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 19482642 - 19482727
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||| ||||||||||||  |||| |||||||||||||||||| ||| ||||||| ||||||||| |||| | |||||||    
T  19482642 agacacgacacagacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcg 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 483
Target Start/End: Original strand, 29205451 - 29205532
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    |||||||||||||||  ||| ||||||||||||||||| |||| ||||||| |||||||| |||| |||||||| |||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacac 29205532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 370 - 475
Target Start/End: Complemental strand, 35158069 - 35157964
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    ||||| |||||||||||||||||  |||  ||||||||||||| |||  ||| |||||| ||||||||||||||| |||||||| ||||||| |||| ||    
T  35158069 gacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtctgacacgacacatgtc 35157970  T
Q  470 cgacac 475  Q
    | ||||    
T  35157969 caacac 35157964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 400 - 475
Target Start/End: Original strand, 7377374 - 7377451
Alignment:
Q  400 aactaataatttgaaaatg--tcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||||||||||||||    |||||||||| ||||||||||||| |||||||||| |||||||||||||| ||||||    
T  7377374 aactaataatttgaaaagaactcatataatttagtgtaattataaatatcggtgtccgacacgatacatattcgacac 7377451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 483
Target Start/End: Complemental strand, 12895355 - 12895245
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccga 472  Q
    |||||||| ||| |||||||  |||| || ||||||||||||||  ||| ||||||  |||||||||||||| |||||||||||||||| |  |||||||    
T  12895355 acgacacgaacaatgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcggacacgacatgtatccga 12895256  T
Q  473 cacagggacac 483  Q
    ||  |||||||    
T  12895255 catcgggacac 12895245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 483
Target Start/End: Original strand, 49431000 - 49431114
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatg-tcatataattcagtgtaattataagtatcggtgtcggacacgatacatat 468  Q
    |||||||| |||||| |||||||  |||| | |||||||||||||||   ||| ||||||||||||||||| |||| |||||||||||||||| || | |    
T  49431000 gacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgt 49431099  T
Q  469 ccgacacagggacac 483  Q
    || |||| |||||||    
T  49431100 ccaacaccgggacac 49431114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 475
Target Start/End: Original strand, 21945478 - 21945583
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    |||| ||||| |||||||||| |  |||| | |||||||||||||||  | | ||||||||||||||||| |||| ||||||||||||| || |||| ||    
T  21945478 gacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtc 21945577  T
Q  470 cgacac 475  Q
    ||||||    
T  21945578 cgacac 21945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 423 - 475
Target Start/End: Original strand, 16073422 - 16073474
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  16073422 ataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacac 16073474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 394 - 475
Target Start/End: Original strand, 4157149 - 4157229
Alignment:
Q  394 tgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||| |||||||||||||||||  ||| |||||| |||| ||||| |||| |||||||||||||||| |||| ||||||||    
T  4157149 tgacacaactaataatttgaaaaa-tcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacac 4157229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 483
Target Start/End: Complemental strand, 8423770 - 8423689
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    |||||||||||| ||  ||| |||||||||||||||||||| | |||||||||||||||| |  | |||||||| |||||||    
T  8423770 ctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacacgacagctgtccgacaccgggacac 8423689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 30838184 - 30838269
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||| |||||||||||| |||| || |   |||||||||||| ||  | |||||||| |||||||||||||||||||||||||    
T  30838184 agacacggcacggacactgatacgtcgatactgctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcg 30838269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 369 - 444
Target Start/End: Complemental strand, 27706262 - 27706187
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||| |||||||||||||| |||| || ||||||||| ||||  ||| |||||| |||||||||| ||||    
T  27706262 agacacgacagggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagt 27706187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 455
Target Start/End: Original strand, 15029751 - 15029825
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgg 455  Q
    ||||||||||||  ||||   |||||||||||||||| ||| ||||||||||||||||||| || | ||||||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtgttggtgtcgg 15029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 475
Target Start/End: Complemental strand, 34306876 - 34306783
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||||| |||  |||| |||||||||||||||||  ||| |||||  |||||||||| |||| |||||||||||||||| || | ||||||||    
T  34306876 gacactgatacgccgacacaactaataatttgaaaaa-tcagataatgtagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacac 34306783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 444
Target Start/End: Original strand, 40481612 - 40481685
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||| ||||||||||||  || | |||||||||||||||||  ||| ||||||||||||||||| ||||    
T  40481612 gacacgacactgacactgacacgccgatacaactaataatttgaaaa-atcacataattcagtgtaattacaagt 40481685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 4383351 - 4383411
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaatta 439  Q
    |||||||||||||||| || | |||||||||||||||||  ||| |||||||||||||||||    
T  4383351 acggacactgacacgtcgatacaactaataatttgaaaa-atcacataattcagtgtaatta 4383411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 423 - 484
Target Start/End: Original strand, 35161064 - 35161125
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacaca 484  Q
    ||||||||||||||||||||||||| | ||||||||||| || | |||||||| || |||||    
T  35161064 ataattcagtgtaattataagtatcagagtcggacacgacacgtgtccgacaccggaacaca 35161125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 38847064 - 38846991
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||||||||||||  |||||| |||||||||||||| |||| || |||||||| |||| || | ||||||||    
T  38847064 ctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcggatacgacacgtgtccgacac 38846991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 11651219 - 11651155
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtg 433  Q
    |||||||| |||||||||||||||| |||| | |||||||||| ||||  ||| |||||||||||    
T  11651219 agacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 11651155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 16303350 - 16303266
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||| |||||||||||||||  |||| |  ||||| ||||||||  | |||||||| |||||||||| |||| |||||||||    
T  16303350 gacacgatacggacactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcg 16303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 441
Target Start/End: Complemental strand, 22440697 - 22440613
Alignment:
Q  357 aaacacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    ||||||||||| |||||||||| ||||||||| || | ||||    ||||||||||| ||  ||| |||||||||||||||||||    
T  22440697 aaacacggatacagacacgacatggacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattata 22440613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 454
Target Start/End: Original strand, 30298926 - 30299006
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatg-tcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||  |||| | |||||||||||||||   | | ||||||||||||||||| |||| |||||||||    
T  30298926 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 454
Target Start/End: Original strand, 30327794 - 30327874
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatg-tcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||  |||| | |||||||||||||||   | | ||||||||||||||||| |||| |||||||||    
T  30327794 gacacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Complemental strand, 2362027 - 2361968
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||||||||  | | |||||| |||||||||| |||| ||||||||||||||||    
T  2362027 ctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcggacacga 2361968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 478
Target Start/End: Complemental strand, 8402777 - 8402718
Alignment:
Q  419 tcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagg 478  Q
    ||||||||||||||||||||||| || || ||||| ||||||| || | |||||||||||    
T  8402777 tcatataattcagtgtaattatatgtctcagtgtcagacacgacacttgtccgacacagg 8402718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 36635299 - 36635370
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    |||||||| ||||||||||||||   |||  ||||||||||||| ||  ||| |||||||||||||||||||    
T  36635299 gacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattata 36635370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 453
Target Start/End: Original strand, 6863161 - 6863211
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    ||||||||||||||  ||||||||||| ||| ||||||| |||||||||||    
T  6863161 taataatttgaaaaaatcatataattcggtgcaattatatgtatcggtgtc 6863211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 14126195 - 14126121
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||| |||||| |||||  ||||    ||||||||||| || |||| ||||||||||||||||||||||    
T  14126195 gacacgacacagacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagt 14126121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 460
Target Start/End: Complemental strand, 482269 - 482232
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||||||||||||| | |||||||||||||||    
T  482269 ataattcagtgtaattataactgtcggtgtcggacacg 482232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 452
Target Start/End: Complemental strand, 6485690 - 6485613
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgt 452  Q
    |||||||||||  |||||  |||| || ||||||||||||||  ||| |||||| |||||||||| |||| |||||||    
T  6485690 gacacggacacctacacgcagacaaaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Complemental strand, 20950456 - 20950415
Alignment:
Q  425 aattcagtgtaattataagtatcggtgtcggacacgatacat 466  Q
    ||||||||||||||||| || |||||||| ||||||||||||    
T  20950456 aattcagtgtaattatatgtgtcggtgtcagacacgatacat 20950415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 460
Target Start/End: Original strand, 42640557 - 42640594
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  42640557 ataattcagtgtaattacaagtgtcggtgtcggacacg 42640594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 475
Target Start/End: Original strand, 4157464 - 4157516
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||| |||| ||||| |||| |||||||||||||||| |||| ||||||||    
T  4157464 ataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacac 4157516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 11596404 - 11596352
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||  ||| ||||||||||||||||| |||| | |||||||    
T  11596404 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcg 11596352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 454
Target Start/End: Original strand, 19312366 - 19312394
Alignment:
Q  426 attcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||||||||    
T  19312366 attcagtgtaattataagtatcggtgtcg 19312394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 35952669 - 35952617
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||| ||  |||||||||||| |||||||||| ||||| ||||||    
T  35952669 ctaataatttgataaaatcatataattcaatgtaattatatgtatcagtgtcg 35952617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 370 - 464
Target Start/End: Original strand, 20873044 - 20873138
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatac 464  Q
    |||||||||||||||||||||||  ||||||  ||||||||||||||  ||| |||||| |||||||||| |||| |||||||||||||||||||    
T  20873044 gacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatac 20873138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 375 - 461
Target Start/End: Complemental strand, 36450833 - 36450747
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||||||||  |||| |||||||||||||||||  ||| | ||||||||||||||| |||| | ||||||||||||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacga 36450747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 15816205 - 15816129
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||  |||| |||||||||||||||||  ||| |||||| ||||||||||||||| |||||||||    
T  15816205 acggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 461
Target Start/End: Original strand, 4948657 - 4948718
Alignment:
Q  400 aactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||||||||||  ||| ||||||||||||||||| |||| ||||||||||||||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 483
Target Start/End: Original strand, 5813575 - 5813680
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacag 477  Q
    |||||||| ||||||  |||| | ||||||||||||||| |||| ||| || ||||||| || |||| |||||||||||||||| || | |||||||| |    
T  5813575 acggacacggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcggacacgacacgtgtccgacaccg 5813674  T
Q  478 ggacac 483  Q
    ||||||    
T  5813675 ggacac 5813680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 451
Target Start/End: Complemental strand, 25192431 - 25192350
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtg 451  Q
    ||||||| |||||||||||||||  |||| | ||||||||||||||| || | |||||||||| ||||||||||| ||||||    
T  25192431 gacacgatacggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtg 25192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 2572140 - 2572056
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||| || ||||||| |||| | |||||||||||||||  ||| |||||| |||||||||| |||| |||||||||    
T  2572140 gacacgacacggataccgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 2572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 22651951 - 22652035
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||  |||| | |||||||||||||||  ||| |||||||| | |||||| |||| |||||||||    
T  22651951 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcg 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 459
Target Start/End: Original strand, 3677751 - 3677850
Alignment:
Q  361 acggatat-agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||| |||||||||||||| |||||||| | |||| || ||||||||| ||||  ||| |||||||  |||||||||| |||||||||| ||||||    
T  3677751 acggatatcagacacgacacggatactgacacatcgacacaattaataattttaaaaaatcacataattctatgtaattatatgtatcggtgttggacac 3677850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 4673509 - 4673426
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    |||||||||| ||||||||||||  |||| |  ||||||||||||||  ||||| ||||||||||||||| ||||||| |||||    
T  4673509 gacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtc 4673426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 452
Target Start/End: Complemental strand, 29510388 - 29510306
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgt 452  Q
    |||||||||||||||||||||||  |||| | |||||||||||||||  ||| | |||||||| |||||| |||| |||||||    
T  29510388 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgt 29510306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 475
Target Start/End: Original strand, 31556972 - 31557076
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    |||| |||| || ||||||||||  |||| |  ||||||||||||||  ||| ||||||||||||||||| |||| |||||||| ||||||| |||| ||    
T  31556972 gacatgacatggtcactgacacgccgacacagttaataatttgaaaaa-tcacataattcagtgtaattacaagtttcggtgtcagacacgacacatgtc 31557070  T
Q  470 cgacac 475  Q
    ||||||    
T  31557071 cgacac 31557076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 482
Target Start/End: Complemental strand, 926872 - 926760
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    |||||||||||||||||||||||   |||   |||||||||||| ||  ||  ||  |||||||||||||||||| |||||||||||| ||| || | ||    
T  926872 gacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataagtgtcggtgtcggacgcgacacgtgtc 926773  T
Q  470 cgacacagggaca 482  Q
    |||||| ||||||    
T  926772 cgacaccgggaca 926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 460
Target Start/End: Original strand, 8343291 - 8343381
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||| ||||| |||||   |||||| |||||||||||||||  ||| |||||| |||||||||| |||| || |||||| |||||    
T  8343291 gacacgacactgacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacg 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 458
Target Start/End: Complemental strand, 18170564 - 18170478
Alignment:
Q  372 cacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggaca 458  Q
    |||||||||||||||||||||  |||| || ||| ||||||||||  | | |||||||| |||||||| || | |||||||||||||    
T  18170564 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggaca 18170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 458
Target Start/End: Complemental strand, 18634132 - 18634046
Alignment:
Q  372 cacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggaca 458  Q
    |||||||||||||||||||||  |||| || ||| ||||||||||  | | |||||||| |||||||| || | |||||||||||||    
T  18634132 cacgacacggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggaca 18634046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 34897068 - 34897149
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||| ||||||| ||||   |||||||||||| ||  ||| ||||||||||||||||||| || ||| ||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 25566848 - 25566900
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||  ||| ||||||||||||||||| |||| |||||||||    
T  25566848 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 25566900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 433
Target Start/End: Complemental strand, 41838208 - 41838144
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtg 433  Q
    |||||||| |||||||||||||||| |||| | |||||||||| ||||  ||| |||||||||||    
T  41838208 agacacgatacggacactgacacgtcgacacagctaataatttaaaaaaatcacataattcagtg 41838144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 461
Target Start/End: Original strand, 3025558 - 3025617
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||||| ||  ||| ||||||||||||||||||| || || |||||||||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacga 3025617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 8342972 - 8343031
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||| |||||||||||||||  ||| |||||| |||||||||| |||| |||||||||    
T  8342972 gacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 8343031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 441
Target Start/End: Original strand, 14134679 - 14134745
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    ||||| ||||| ||||||| ||||  ||||||||||||| ||  ||| |||||||||||||||||||    
T  14134679 gacaccgacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattata 14134745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 483
Target Start/End: Complemental strand, 20679468 - 20679366
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacaggga 480  Q
    |||||||||| || ||||   |||||||||||| ||  ||| ||| |||||||||||||||||| |||||||| ||| | | || | |||||||| ||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccggga 20679369  T
Q  481 cac 483  Q
    |||    
T  20679368 cac 20679366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 460
Target Start/End: Original strand, 24613528 - 24613585
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||||||||  ||| |||||| |||||||||| |||| |||||||||||||||    
T  24613528 ctaataatttgaaaaa-tcacataattaagtgtaattacaagtgtcggtgtcggacacg 24613585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 456
Target Start/End: Complemental strand, 30077439 - 30077385
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgga 456  Q
    |||||||||||||||  ||| ||||||||||||||||| |||| || ||||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcgga 30077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 36934646 - 36934716
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    |||||||||||||||| |||||| ||||   ||||||||| |||||  ||| |||||||| ||||||||||    
T  36934646 acacgacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattata 36934716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 459
Target Start/End: Complemental strand, 13844648 - 13844591
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||||||| ||  ||| |||||| |||||||||||| || ||||||||||||||    
T  13844648 ctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 475
Target Start/End: Original strand, 18407726 - 18407799
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||||||  ||||  ||| ||||||||||||||||| |||| ||| || ||||||||| |||| ||||||||    
T  18407726 ctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacac 18407799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 40332200 - 40332257
Alignment:
Q  404 aataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||| ||  ||| ||||||||||||||||| |||| ||||||| ||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacga 40332257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 461
Target Start/End: Complemental strand, 4786411 - 4786331
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||  ||||  | ||||||||| | ||  ||| ||||||||||||||||||| || ||||||||||| ||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtcggatacga 4786331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 458
Target Start/End: Complemental strand, 12606881 - 12606825
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggaca 458  Q
    |||||||||||| ||  |||||||||||| |||||||||| || |||||||| ||||    
T  12606881 ctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtcagaca 12606825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 13437048 - 13436964
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||| |||| |||||||||||||  |||| | |||||||||||||||  ||| ||||||||  ||||| | |||| |||||||||    
T  13437048 gacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcg 13436964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 31236629 - 31236569
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgat 462  Q
    |||||||||||| ||  ||| |||||||| |||||||||| || |||||| ||||||||||    
T  31236629 ctaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggacacgat 31236569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 475
Target Start/End: Complemental strand, 33405435 - 33405363
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||| ||   || |||||| |||||||||||| || |||||||||||||||| |||| || |||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacgacacatgtctgacac 33405363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 474
Target Start/End: Complemental strand, 41831991 - 41831915
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatc-----ggtgtcggacacgatacatatccgaca 474  Q
    ||||||||||||||  ||| |||||||||||||| || |||| ||     ||||||||||||||||| |||||||||    
T  41831991 taataatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgttggtgtcggacacgatacgtatccgaca 41831915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 370 - 475
Target Start/End: Original strand, 8773 - 8878
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    |||||||||||||||||||||||  |||| | |||||||||||||||  |||||| ||| |||||||||| |||| |||||||||||||||| || | ||    
T  8773 gacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtc 8872  T
Q  470 cgacac 475  Q
    ||||||    
T  8873 cgacac 8878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 3e-21; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 375 - 475
Target Start/End: Complemental strand, 46348462 - 46348362
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgaca 474  Q
    ||||||||||||||||||  |||| | |||||||||||||||  |||||||||| |||||||||| |||| |||||||||||||||| || | |||||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgaca 46348363  T
Q  475 c 475  Q
    |    
T  46348362 c 46348362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 377 - 475
Target Start/End: Complemental strand, 22515964 - 22515866
Alignment:
Q  377 cacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||| ||||||  |||| | |||||||||||||||  ||| |||||| |||||||||| |||| |||||||||||||||| |||||||||||||    
T  22515964 cacggacacggacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacac 22515866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 373 - 454
Target Start/End: Complemental strand, 1486790 - 1486709
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||| ||||||||| ||||| | |||||||||||||||  ||| |||||||||||||||||||||| |||||||||    
T  1486790 acgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 371 - 475
Target Start/End: Complemental strand, 16927268 - 16927165
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatcc 470  Q
    ||||||||| ||||||||||||| | |||| |||||||||||||||  |||||||||||||||||||||||  | | |||||| || |||| ||||||||    
T  16927268 acacgacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattatatatgttggtgtcagatacga-acatatcc 16927170  T
Q  471 gacac 475  Q
    |||||    
T  16927169 gacac 16927165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 379 - 483
Target Start/End: Original strand, 37598816 - 37598919
Alignment:
Q  379 cggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagg 478  Q
    ||||||||||||||  |||| |||||||||||||||||  ||| | |||||||||||||||||||| |||||||||||||||| || | |||||||  ||    
T  37598816 cggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgg 37598914  T
Q  479 gacac 483  Q
    |||||    
T  37598915 gacac 37598919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 466
Target Start/End: Complemental strand, 38078740 - 38078649
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacat 466  Q
    |||||| |||||||||||| |||| | |||||||||||||||  ||| |||||||| |||||||| |||| |||||||||||||||| ||||    
T  38078740 gacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacacat 38078649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 458
Target Start/End: Complemental strand, 42359532 - 42359445
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggaca 458  Q
    |||| ||||||||||||||||| ||||| | |||||||||||||||  ||| | ||||||||||||||| |||| |||||||||||||    
T  42359532 acacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggaca 42359445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 483
Target Start/End: Original strand, 1815240 - 1815345
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacag 477  Q
    |||||||||||||||  |||| || |||| |||| ||||  ||| ||||||||||||||||| |||| |||||||| ||||||| |||| |||||||| |    
T  1815240 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccg 1815339  T
Q  478 ggacac 483  Q
    ||||||    
T  1815340 ggacac 1815345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 28273182 - 28273089
Alignment:
Q  360 cacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    ||||||||  |||| |||| ||||||||||| | ||||| ||||||| |||||||||  ||||||||||||||||||||| |||| ||||||||    
T  28273182 cacggatacggacatgacaaggacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 461
Target Start/End: Complemental strand, 22881689 - 22881609
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||  |||| |||||||||||||||||  ||| |||||| |||||||||| |||| ||||||||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacga 22881609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 24577259 - 24577186
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||| |||||| ||||| |||||||||||||||||  ||| ||||||||||||||||| |||| |||||||||    
T  24577259 gacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 458
Target Start/End: Complemental strand, 5927424 - 5927336
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggaca 458  Q
    ||||||||||||||||||||||| | |||   |||||||||||||||  |||||||||| | |||||||| |||| || ||||||||||    
T  5927424 gacacgacacggacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcggaca 5927336  T

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Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 7918295 - 7918211
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||| |||| ||||||| |||||| ||||||||||||| ||  ||| ||||||||||||||||||| || || ||||||    
T  7918295 gacacgacacagacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcg 7918211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 398849 - 398778
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattata 441  Q
    |||||||||||||||||||||||  ||||   |||||||||||||||  ||| |||||||||||||||||||    
T  398849 gacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 454
Target Start/End: Complemental strand, 18556535 - 18556456
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||  |||| | |||||||||||||||| ||| |||||| | |||||||| |||||| |||||||    
T  18556535 gacacggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcg 18556456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 482
Target Start/End: Original strand, 18337338 - 18337416
Alignment:
Q  404 aataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggaca 482  Q
    |||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||| | || | |||||||| ||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggaca 18337416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 381 - 475
Target Start/End: Original strand, 36878447 - 36878541
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||||  ||||   |||||||||||| ||  ||| ||||||||||||||||||| || |||||||| ||||||| |||| ||||||||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacacgaaacatgtccgacac 36878541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 475
Target Start/End: Original strand, 51410031 - 51410105
Alignment:
Q  402 ctaataatttgaaaatg-tcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||||||||||||   ||| ||||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  51410031 ctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacac 51410105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 40181878 - 40181935
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||||||| ||  ||| ||||||||||||||||||| |||||||||||||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacac 40181935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 47989472 - 47989556
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||| ||||||||||||  |||| || ||||||||| ||||  ||| ||||||||||||||||| |||| |||||||||    
T  47989472 agacacgacacagacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 475
Target Start/End: Original strand, 21530697 - 21530769
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||| ||  ||||||||||  || ||||||||||| |||||||||||||||| |||| ||||||||    
T  21530697 taataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatgtccgacac 21530769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 31672969 - 31672889
Alignment:
Q  380 ggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||||   |||| | |||||||||||||||  |||  |||||||||||||||| |||| |||||||||||||||    
T  31672969 ggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcggacacg 31672889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 475
Target Start/End: Complemental strand, 40258984 - 40258912
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||||||  ||| ||||||||||||||||| |||| |||||||| ||||||| || | ||||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacac 40258912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 5944256 - 5944342
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatg--tcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||| ||||||||||||  | || | |||||||||||||||    ||| |||||||||||||||||||||| |||||||||    
T  5944256 gacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 6332671 - 6332729
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||| |||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||    
T  6332671 gacacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtatcggtgtcg 6332729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 426 - 481
Target Start/End: Original strand, 19637799 - 19637854
Alignment:
Q  426 attcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggac 481  Q
    ||||| |||||| ||| || |||||||||||||||||||||||||||||| |||||    
T  19637799 attcaatgtaatcatatgtgtcggtgtcggacacgatacatatccgacaccgggac 19637854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 454
Target Start/End: Complemental strand, 9629982 - 9629900
Alignment:
Q  372 cacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||| |||||| ||||| | ||||   |||||||||||| ||  |||||||||||||||| ||||||||| |||||||||    
T  9629982 cacgacatggacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtcg 9629900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 447
Target Start/End: Original strand, 34298410 - 34298488
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatc 447  Q
    |||||||||||||| ||||||||   ||||  ||||||||||||| ||  ||| ||||||||||||||||||| |||||    
T  34298410 agacacgacacggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaattatacgtatc 34298488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 460
Target Start/End: Complemental strand, 19058951 - 19058850
Alignment:
Q  360 cacggatatagacacgacacggacact-gacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggaca 458  Q
    ||||||||  ||||||||||  ||||| ||||||  |||| | |||||||||| ||||  | | ||||||||||||||||| |||| |||||||||||||    
T  19058951 cacggatacggacacgacacacacacttgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcggaca 19058852  T
Q  459 cg 460  Q
    ||    
T  19058851 cg 19058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 462
Target Start/End: Complemental strand, 35702661 - 35702580
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgat 462  Q
    |||||||||| |  |||| | |||||||||||||||  ||| |||||| |||||||||| |||| || ||||||||||||||    
T  35702661 gacactgacatgccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtcagtgtcggacacgat 35702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 419 - 460
Target Start/End: Original strand, 52903273 - 52903314
Alignment:
Q  419 tcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  52903273 tcatataattcagtgtaattatatgtgtcggtgtcggacacg 52903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 6612255 - 6612171
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||| |||||||  || | |  ||||||||||||||  | | ||||||||||||||||| |||| |||||||||    
T  6612255 gacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 474
Target Start/End: Complemental strand, 8842798 - 8842694
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    |||| ||||| ||||||||||||  | ||  |||| |||||||| ||   ||||||||| | |||||||||| |||| |||||||||||||| || ||||    
T  8842798 gacatgacacagacactgacacgccggcaccactagtaatttgagaaaaacatataatttaatgtaattatatgtattggtgtcggacacgacacgtatc 8842699  T
Q  470 cgaca 474  Q
    |||||    
T  8842698 cgaca 8842694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 461
Target Start/End: Complemental strand, 14332695 - 14332635
Alignment:
Q  401 actaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||| ||  ||| |||||| |||||||||||| || ||||||||||||||||    
T  14332695 actaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacacga 14332635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 483
Target Start/End: Complemental strand, 5898360 - 5898237
Alignment:
Q  360 cacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||  |||| ||||| |||||||| |||  ||||   |||||||| ||||||  ||| ||||||||||||||||||| |  |||||||| |||||    
T  5898360 cacggatacggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagacac 5898261  T
Q  460 gatacatatccgacacagggacac 483  Q
    || || | ||| |||| |||||||    
T  5898260 gacacgtgtccaacaccgggacac 5898237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 449
Target Start/End: Complemental strand, 48450671 - 48450592
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcgg 449  Q
    |||||||||||||||||||||||   ||| | |||||||||||||||  | | |||||| |||||||||| |||| ||||    
T  48450671 gacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 484
Target Start/End: Complemental strand, 18190160 - 18190078
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacaca 484  Q
    |||||||||||||||  | | ||||||||||||||||| |||| ||| |||| ||||| | || | |||||||| ||||||||    
T  18190160 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacaca 18190078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 454
Target Start/End: Original strand, 113289 - 113358
Alignment:
Q  385 ctgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||  |||| | |||||||||||||||  ||| ||||||||||||||||| |||| | |||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcg 113358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 460
Target Start/End: Complemental strand, 1864931 - 1864874
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||| ||  ||| ||||||||||||||||||| || ||||||| |||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttggacacg 1864874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 460
Target Start/End: Complemental strand, 24334736 - 24334699
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  24334736 ataattcagtgtaattacaagtgtcggtgtcggacacg 24334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 25272456 - 25272541
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||  |||| ||||| |||||| |  ||| ||||||| ||  ||| |||||| ||||||||||||||| |||||||||    
T  25272456 agacacgacacaaacacagacactttgacacagttaacaatttgagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 32434775 - 32434726
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||| ||||||||||||||||| |||| |||||||| |||||||| ||||    
T  32434775 gacacaactaataatttgaaaaagtcacataattcattgtaattacaagt 32434726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 459
Target Start/End: Complemental strand, 39130851 - 39130762
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||| ||| | ||||||| |||||  | ||||||||| | ||  | |||||||| |||||||||||| || ||||||||||||||    
T  39130851 gacacgacatggatattgacacgctgacactattaataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcggacac 39130762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 40917726 - 40917808
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||| |||||||||  |||| | |||||||||||||||  ||  | |||| |||||||||| |||| |||||||||    
T  40917726 gacacgacacggatactgacacgccgacacagctaataatttgaaaaaatc--acaattaagtgtaattacaagtctcggtgtcg 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Complemental strand, 1705044 - 1704992
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||  ||| ||||||||| ||||||| |||| |||||||||    
T  1705044 ctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcg 1704992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 5376584 - 5376500
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||| |||||  ||||   |||||||||| | ||  | | ||||||||||||||||| |||| |||||||||    
T  5376584 gacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtcg 5376500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 377 - 440
Target Start/End: Complemental strand, 9033085 - 9033021
Alignment:
Q  377 cacggacactgacacgttgacataactaataatttg-aaaatgtcatataattcagtgtaattat 440  Q
    |||||||||||||||||  |||  |||||||||||| ||||  ||| ||||||||||||||||||    
T  9033085 cacggacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaattat 9033021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 444
Target Start/End: Complemental strand, 14359615 - 14359532
Alignment:
Q  360 cacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    ||||||||  |||||||||| ||||| ||||||  |||| | |||||||||||||||  ||| |||||| |||||||||| ||||    
T  14359615 cacggatacggacacgacacagacacggacacgccgacacagctaataatttgaaaa-atcacataatttagtgtaattacaagt 14359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 20157434 - 20157350
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||| ||||||||| | ||||   |||||||| ||| ||  ||| ||||||||||||||| ||| || |||||||||    
T  20157434 gacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcg 20157350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 452
Target Start/End: Original strand, 21378547 - 21378635
Alignment:
Q  364 gatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgt 452  Q
    ||||| |||||||||||||||  |||||   |||| | ||||||| |||||||  | | ||||||||||||||||| |||| |||||||    
T  21378547 gatatggacacgacacggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 23531830 - 23531790
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataa 442  Q
    |||||||||||||||| ||| |||||||| |||||||||||    
T  23531830 ctaataatttgaaaatatcacataattcaatgtaattataa 23531790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 30749868 - 30749904
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||||||||||||| || ||||||||||||||    
T  30749868 ataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 30771319 - 30771355
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||||||||||||| || ||||||||||||||    
T  30771319 ataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 31694785 - 31694710
Alignment:
Q  381 gacactgacacgttgacataactaataatttg--aaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||| |||| |||||| |||||||||||  ||||  ||| |||||||||| |||||| |||| |||||||||    
T  31694785 gacactgatacgtcgacatagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcg 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 459
Target Start/End: Complemental strand, 21191140 - 21191051
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||||||||||||||| |  |||| | |||||||||||||||  ||| ||||||||||||||||| |||| ||||||||||||||    
T  21191140 gacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 460
Target Start/End: Original strand, 6247597 - 6247687
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||| ||| |||||||||||  |||| | |||||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||    
T  6247597 gacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 6247687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 13287483 - 13287399
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||| |||||| |||| |  ||||||||||||||  ||| |||||||||||||| || |||| |||||||||    
T  13287483 gacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcg 13287399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 475
Target Start/End: Complemental strand, 28588725 - 28588653
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||| ||  ||| ||||||||||||||||||| || |||||||||||||||| ||||||| |||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacacatatctgacac 28588653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 482
Target Start/End: Complemental strand, 30502440 - 30502360
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggaca 482  Q
    |||||||||||| ||  |||  |||||||||||||||||| || |||||||||||||||| |||| |||||||| ||||||    
T  30502440 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggaca 30502360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 482
Target Start/End: Complemental strand, 30542783 - 30542703
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggaca 482  Q
    |||||||||||| ||  |||  |||||||||||||||||| || |||||||||||||||| |||| |||||||| ||||||    
T  30542783 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacactgggaca 30542703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 39698524 - 39698600
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||| ||||| | |||||||||||||||  ||| ||||||||||||||||| |||| || ||||||    
T  39698524 acggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 15405137 - 15405065
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    ||||||||||||||||| ||||  ||||| |||||||||||||||||  |||||||||||| |||||||| ||||    
T  15405137 gacacgacacggacactaacac--tgacacaactaataatttgaaaaaatcatataattcaatgtaattacaagt 15405065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 483
Target Start/End: Complemental strand, 21576841 - 21576716
Alignment:
Q  360 cacggatatagacac--gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggac 457  Q
    |||||||| ||||||  |||||| ||||||| |||   ||| | |||||||||||||||  ||| ||||||||||||||||| |||| ||| ||||||||    
T  21576841 cacggatacagacactggacacgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggac 21576742  T
Q  458 acgatacatatccgacacagggacac 483  Q
    |||| || | || ||||| |||||||    
T  21576741 acgacacgtgtctgacactgggacac 21576716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 462
Target Start/End: Original strand, 14422879 - 14422969
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgat 462  Q
    ||||||||| ||||||||||||   || | | |||||||||| |||||  || |||||||||||||||||||||| ||| |||||||||||||    
T  14422879 gacacgacaaggacactgacacaccgatacagctaataatttaaaaat--cacataattcagtgtaattataagtttcgatgtcggacacgat 14422969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 21351979 - 21351906
Alignment:
Q  380 ggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    ||||||||||||   |||| ||||||||||| ||||| |||| ||||||||||||||||| |||| ||||||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 455
Target Start/End: Original strand, 15382452 - 15382539
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttg--aaaatgtcatataattcagtgtaattataagtatcggtgtcgg 455  Q
    ||||||||||||||| |||||||  |||| | |||||||||||  ||||  |||||||||||||| |||||| |||| ||||||||||    
T  15382452 gacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcgg 15382539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 21522725 - 21522809
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||  |||| | |||||||||| ||||  | | ||||||||||||||||| || | |||||||||    
T  21522725 gacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcg 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 21533291 - 21533375
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||  |||| | |||||||||| ||||  | | ||||||||||||||||| || | |||||||||    
T  21533291 gacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcg 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 26312798 - 26312838
Alignment:
Q  424 taattcagtgtaattataagtatcggtgtcggacacgatac 464  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  26312798 taattcagtgtaattatatgtatcggtgtcggacacgatac 26312838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 454
Target Start/End: Original strand, 10298553 - 10298628
Alignment:
Q  379 cggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||| |||||  |||| ||||||||||||||||| |||| ||||| || |||||||| |||| |||||||||    
T  10298553 cggacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcg 10298628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 384 - 459
Target Start/End: Original strand, 33178014 - 33178089
Alignment:
Q  384 actgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||||  |||| |||||||||||| ||||  ||| |||||| |||||||||| |||| ||||||||||||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 36642846 - 36642763
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    |||||||||||||||||||||||  |||| |  |||||||||||||| || | ||| || ||||||| ||||||| ||||||||    
T  36642846 gacacgacacggacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtc 36642763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 457
Target Start/End: Original strand, 8420011 - 8420089
Alignment:
Q  379 cggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggac 457  Q
    |||||| |||||||  |||||| |||||||||||||||  | | |||||||| |||||||| |||| ||||||||||||    
T  8420011 cggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcggac 8420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 449
Target Start/End: Original strand, 14674249 - 14674323
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcgg 449  Q
    ||||||||||||||||||  |||| | |||||||||||||||  ||| |||||| |||||||||| |||| ||||    
T  14674249 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 40131626 - 40131680
Alignment:
Q  400 aactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||  ||| |||||||||| ||||||||| |||||||||||    
T  40131626 aactaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcg 40131680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 444
Target Start/End: Original strand, 4105232 - 4105308
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttg--aaaatgtcatataattcagtgtaattataagt 444  Q
    |||| |||||||| |||||||||  ||||||||||||||||||  ||||  ||| ||||||||||||||||| ||||    
T  4105232 gacatgacacggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagt 4105308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 459
Target Start/End: Complemental strand, 6326381 - 6326292
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||||||||||||||||||  |||||  ||| |||||||| ||  | | ||||||||||||||||| |||| || | |||||||||    
T  6326381 gacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtcagcgtcggacac 6326292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 369 - 454
Target Start/End: Original strand, 21542004 - 21542089
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||| |||| ||||| |  |||| |||||||||||| ||||  | | ||||||||||||||||| |||| |||||||||    
T  21542004 agacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcg 21542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 416
Target Start/End: Complemental strand, 6072408 - 6072352
Alignment:
Q  360 cacggatatagacacgacacggacactgacacgttgacataactaataatttgaaaa 416  Q
    ||||||||| ||||||| ||||| |||||||||  ||||||||||||||||| ||||    
T  6072408 cacggatatggacacgatacggatactgacacgccgacataactaataattttaaaa 6072352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 6770523 - 6770612
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacat 466  Q
    |||||||||||||||||  ||||| |||||||||||| | ||  ||| ||||||||||||| ||||  || || ||||||||||||| ||||    
T  6770523 gacacggacactgacacactgacacaactaataatttaagaaaatcacataattcagtgtacttat--gtgtcagtgtcggacacgacacat 6770612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 22013389 - 22013461
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataa 442  Q
    |||||||||||||||||||||||  |||| | ||||||||||| |||  | | |||||| |||||||||||||    
T  22013389 gacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 482
Target Start/End: Complemental strand, 23012460 - 23012380
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggaca 482  Q
    |||||||||||| ||  |||||||||| | |||||||||| || ||||||| |||||||| |||| || ||||| ||||||    
T  23012460 ctaataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttggacacgacacatgtctgacaccgggaca 23012380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 458
Target Start/End: Complemental strand, 24906385 - 24906297
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggaca 458  Q
    ||||||||||| |||||||||||   ||| |  ||||||||||||||  | | ||||||||||||||||| |||| ||||| |||||||    
T  24906385 gacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcggaca 24906297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 43564891 - 43564947
Alignment:
Q  405 ataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||| |||  ||| |||||| ||||||||||||||| ||||||||||||||||    
T  43564891 ataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacga 43564947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 42029780 - 42029823
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacat 466  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||    
T  42029780 ataattcaatgtaattatatgtatcggtgtcggacacgacacat 42029823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 461
Target Start/End: Original strand, 15884016 - 15884054
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  15884016 ataattcagtgtaattacaagtgtcggtgtcggacacga 15884054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 444
Target Start/End: Original strand, 25863179 - 25863253
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||| ||||  ||||||| |||||   ||||||||||| ||  | ||||||||||||||||||||||||    
T  25863179 gacacgacacagacatcgacacgtcgacatgtataataatttgagaaaatgatataattcagtgtaattataagt 25863253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 482
Target Start/End: Original strand, 31084309 - 31084415
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcg-----gtgtcggacacgatacatatccgacac 475  Q
    ||||||||||||  |||| | |||||||||||||||  ||| |||||||| |||||||| |||| |||     ||||||||||||| || | ||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacac 31084408  T
Q  476 agggaca 482  Q
     ||||||    
T  31084409 tgggaca 31084415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 439
Target Start/End: Original strand, 41995449 - 41995515
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaatta 439  Q
    ||||||| ||||||||||||  |||| ||||||||||| |||||  ||| |||||||| ||||||||    
T  41995449 acgacacagacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 459
Target Start/End: Original strand, 42893367 - 42893424
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||||||||||||||  ||| ||||| ||||||||||| |||| |||||||| |||||    
T  42893367 ctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacac 42893424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 444
Target Start/End: Original strand, 43001780 - 43001849
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||||||||| || ||||   |||||||||||||||  | | ||||||||||||||||| ||||    
T  43001780 gacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagt 43001849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 459
Target Start/End: Original strand, 2548415 - 2548451
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  2548415 ataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 7677712 - 7677764
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||  ||| ||||||||||| ||||| |||| |||||||||    
T  7677712 ctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcg 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 405 - 481
Target Start/End: Complemental strand, 18421890 - 18421814
Alignment:
Q  405 ataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggac 481  Q
    ||||||||| ||  ||| ||||| ||||||||||||| || |||| ||||||||||| |||| |||| ||| |||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcggacacgacacatgtccggcaccgggac 18421814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 435
Target Start/End: Complemental strand, 19552626 - 19552562
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgta 435  Q
    ||||||||||||||||||||||  |||| |  ||||||||||||||  ||| |||||| ||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 41558764 - 41558724
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttga 413  Q
    ||||||||||||||||||| |||||| || |||||||||||    
T  41558764 acgacacggacactgacacattgacacaaataataatttga 41558724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 8e-19; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 377 - 461
Target Start/End: Original strand, 1401007 - 1401091
Alignment:
Q  377 cacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||||||||||||||| ||| ||  |||||||||||| ||  ||| ||||||||||||||||||||||||||||||| |||||||    
T  1401007 cacggacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaattataagtatcggtgtccgacacga 1401091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 370 - 475
Target Start/End: Original strand, 33994187 - 33994292
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatc 469  Q
    ||||||||||| |||||||||||  |||  ||||| ||||||||||| |||| ||||||||||| ||||| |||| |||||||| ||||||| |||| ||    
T  33994187 gacacgacacgaacactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtc 33994286  T
Q  470 cgacac 475  Q
    | ||||    
T  33994287 caacac 33994292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 375 - 475
Target Start/End: Original strand, 15680789 - 15680889
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgaca 474  Q
    |||| |||||||||||||  |||||| |||||||||  ||||  ||| |||||| ||||||||||||||| |||||||||||||||| || | |||||||    
T  15680789 gacatggacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgaca 15680888  T
Q  475 c 475  Q
    |    
T  15680889 c 15680889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 461
Target Start/End: Original strand, 26733278 - 26733370
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||||||||||||||| ||||   |||||||||||| ||  ||| |||||||||| |||||| | || ||||||||||||||||    
T  26733278 agacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacacga 26733370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 463
Target Start/End: Original strand, 25481877 - 25481970
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgata 463  Q
    ||||| ||| ||||| |||||||  |||| | |||||||||||||||  ||| ||||||||||||||||| |||| | ||||||||||||||||    
T  25481877 gacacaacatggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacgata 25481970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 483
Target Start/End: Original strand, 21864781 - 21864896
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatg--tcatataattcagtgtaattataagtatcggtgtcggacacgatacata 467  Q
    |||||||||||||||| |||||   |||| | |||||||||||||||    |||||||||| |||||||||| |||| ||| |||||||||||| || |     
T  21864781 gacacgacacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcgctgtcggacacgacacgtg 21864880  T
Q  468 tccgacacagggacac 483  Q
    |||||||| |||||||    
T  21864881 tccgacaccgggacac 21864896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 24339617 - 24339701
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||| ||||| |||||||  |||| | |||||||||||||||  ||| ||||||||||||||||| |||| |||||||||    
T  24339617 gacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 27945016 - 27945100
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||  ||||  ||||||||||||| ||  | | ||||||||||||||||| |||| |||||||||    
T  27945016 gacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 453
Target Start/End: Original strand, 13300409 - 13300468
Alignment:
Q  394 tgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    |||||||||||||||||||||||  |||||||||||||||||||||  ||| ||||||||    
T  13300409 tgacataactaataatttgaaaaaatcatataattcagtgtaattaccagtctcggtgtc 13300468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 376 - 475
Target Start/End: Original strand, 21880133 - 21880232
Alignment:
Q  376 acacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||| ||||| ||| || |||||  |||||||||||| ||  | | ||||||||||||||||| |||| |||||||||||||||| |||| ||||||||    
T  21880133 acacgaacactaacatgtggacatcgctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacac 21880232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 454
Target Start/End: Complemental strand, 5409917 - 5409836
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||| ||||||||||||| ||| | | |||||||||||||||  ||| ||||||||||| ||||| |||| |||||||||    
T  5409917 acgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcg 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 480
Target Start/End: Complemental strand, 7197375 - 7197271
Alignment:
Q  376 acacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||| |||| |||||||  |||| | |||||||||| ||||  |||| ||||||| |||||||| |||| |||||||||||||| | |||| ||||||||    
T  7197375 acacagacattgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggacacaacacatgtccgacac 7197276  T
Q  476 aggga 480  Q
     ||||    
T  7197275 cggga 7197271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 8234146 - 8234226
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||| |||||||||||||||||  | | ||||||||||||| ||| ||||  ||||||||||||||| |||| ||||||||    
T  8234146 gacacaactaataatttgaaaaaataacataattcagtgtagttacaagtgccggtgtcggacacgacacatgtccgacac 8234226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 43027553 - 43027469
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||  |||  | |||||||||||||||  ||| ||||| |||||||| || |||| |||||||||    
T  43027553 gacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcg 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 460
Target Start/End: Complemental strand, 11061157 - 11061070
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    |||||||||||||||||||   |||| | |||||||||||||||  ||| |||||| ||| |||||| |||| |||||||| ||||||    
T  11061157 acgacacggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtcagacacg 11061070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 386 - 453
Target Start/End: Complemental strand, 11665508 - 11665441
Alignment:
Q  386 tgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    ||||||| ||||| |||||||||||||||||  ||| |||||||||| ||||||||||| ||| ||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 435
Target Start/End: Original strand, 2034407 - 2034481
Alignment:
Q  361 acggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgta 435  Q
    |||||||  ||||||||||||| ||| |||||| ||||  ||||||||||||| ||| |||||||||| ||||||    
T  2034407 acggatactgacacgacacggatacttacacgtcgacaccactaataatttgagaatatcatataatttagtgta 2034481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 455
Target Start/End: Original strand, 24105644 - 24105738
Alignment:
Q  361 acggatatagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgg 455  Q
    |||||||  |||||||||||||||||||||||  |||| | |||||||||||||||  |   || |||||||||||||| |||| |||| |||||    
T  24105644 acggatacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcgg 24105738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 371 - 460
Target Start/End: Original strand, 3721070 - 3721158
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacg 460  Q
    ||||||||||||||||||||  | |||||  |||||||||||| ||  ||| |||||| ||| |||||||| || |||||||||||||||    
T  3721070 acacgacacggacactgacatttcgacatg-ctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacacg 3721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 382 - 483
Target Start/End: Original strand, 41020483 - 41020584
Alignment:
Q  382 acactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggac 481  Q
    |||||||||||| |||| ||||||||||||  |||  ||| |||||| |||||||||||| |  ||||||| | |||||| |||||||  |||| |||||    
T  41020483 acactgacacgtcgacacaactaataatttacaaaaatcacataatttagtgtaattatatgcgtcggtgttgaacacgacacatatctaacaccgggac 41020582  T
Q  482 ac 483  Q
    ||    
T  41020583 ac 41020584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 5235961 - 5236045
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||| ||||||||||||| ||||   |||||||||| | ||  | |||||||| ||||||||||||  |||||||||||    
T  5235961 gacacgacacagacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattatatatatcggtgtcg 5236045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 13770666 - 13770750
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||| |||  |||| | |||||||||| ||||  | | ||||||||||||||||| |||| ||| |||||    
T  13770666 gacacgacacggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcg 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 474
Target Start/End: Original strand, 20549798 - 20549870
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgaca 474  Q
    |||||||||||| ||  |||  |||||||||||||||||| || |||||||||||||| | |||| |||||||    
T  20549798 ctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacacatgtccgaca 20549870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 39138472 - 39138532
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacacagggacac 483  Q
    |||||||||||||||||||  | ||||||||||||||||||||| ||  |||| |||||||    
T  39138472 ataattcagtgtaattatatatgtcggtgtcggacacgatacatgtctaacacggggacac 39138532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 454
Target Start/End: Original strand, 3991324 - 3991383
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||| |||||||||||||||||  ||| |||||||||| |||||| |||| |||||||||    
T  3991324 gacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 3991383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 446
Target Start/End: Original strand, 11831432 - 11831483
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagtat 446  Q
    |||| |||||||||||||||||  |||||||||| |||||||||| ||||||    
T  11831432 gacacaactaataatttgaaaaaatcatataatttagtgtaattacaagtat 11831483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 11890970 - 11890919
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||  |||||||||||||||||||||| ||| | |||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcg 11890919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 454
Target Start/End: Complemental strand, 21141065 - 21140982
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||| | ||||||| ||||  ||||||||||| | ||  |||||||||||||||| |||||| || |||| ||||    
T  21141065 acacgacacggacgccgacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattataggtgtcggagtcg 21140982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 483
Target Start/End: Original strand, 598182 - 598296
Alignment:
Q  369 agacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatat 468  Q
    ||||| ||||||||||||||||| | ||||   |||||||||| | ||  |||  ||||| | ||||||| ||||| |||||||| ||||||| || | |    
T  598182 agacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgt 598281  T
Q  469 ccgacacagggacac 483  Q
    ||||||| |||||||    
T  598282 ccgacaccgggacac 598296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 7058431 - 7058485
Alignment:
Q  400 aactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||  |||| |||||||||||||||| |||| | |||||||    
T  7058431 aactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcg 7058485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 459
Target Start/End: Complemental strand, 42720963 - 42720885
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||||||||||||   |||||||||||||||  ||| |||||| | |||||||||| || || ||||| |||||    
T  42720963 gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtctgacac 42720885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 6630985 - 6630912
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||  ||||  ||||||||||||| || ||||  |||||||||||||||||| || ||| |||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtcg 6630912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 9408407 - 9408334
Alignment:
Q  381 gacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||   |||| || ||||||||||||||  ||| |||||| |||||||||| |||| |||||||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 9408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 454
Target Start/End: Original strand, 10042915 - 10042996
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||| |||||  ||||  ||||||||||||| ||  ||| |||||| || |||||||||||| || ||||||    
T  10042915 acgacacggacacttacacgccgacaccactaataatttgataaattcacataatttagcgtaattataagtgtcagtgtcg 10042996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 454
Target Start/End: Complemental strand, 18013155 - 18013074
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||||||   |||||  ||||||||||| ||||  | | ||||||||||||||||||| || || ||||||    
T  18013155 acgacacggacactgacattctgacactactaataatttaaaaaaattacataattcagtgtaattatatgtgtcagtgtcg 18013074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 459
Target Start/End: Complemental strand, 40287428 - 40287352
Alignment:
Q  382 acactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    |||| ||||||  |||| ||| |||||||||||||  ||||||| ||||||||||||| |||| ||||| ||||||||    
T  40287428 acacggacacgccgacacaacgaataatttgaaaaaatcatata-ttcagtgtaattacaagtgtcggtatcggacac 40287352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 19992008 - 19992060
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||| ||  ||| ||| |||||||||||||||||| |||||||||    
T  19992008 ctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcg 19992060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 475
Target Start/End: Original strand, 25956473 - 25956525
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||||||| |||||| | |||| ||||||||||||||||||||| || |||||    
T  25956473 ataattcaatgtaatcacaagtgtcggtgtcggacacgatacatgtcggacac 25956525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 450
Target Start/End: Complemental strand, 26033513 - 26033465
Alignment:
Q  402 ctaataatttgaaaatgtcatataattcagtgtaattataagtatcggt 450  Q
    |||||||||||||||  ||| ||||||||||||||||| |||| |||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggt 26033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 454
Target Start/End: Original strand, 35861951 - 35862023
Alignment:
Q  382 acactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||| |||||  |||| |||||||||||||||||  ||| |||||||| ||||||| ||||| || ||||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtctgtgtcg 35862023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 178903 - 178819
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcat-ataattcagtgtaattataagtatcggtgtc 453  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||  |||| ||||||||||||||||| |||| || |||||    
T  178903 gacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtc 178819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 484
Target Start/End: Complemental strand, 545 - 432
Alignment:
Q  371 acacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatcc 470  Q
    ||||| |||||||||||| |||  ||||   |||||||||||||||  ||| | ||||||||||||||| |||| ||||||||||||||||  | | |||    
T  545 acacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtcc 446  T
Q  471 gacacagggacaca 484  Q
    ||||| ||||||||    
T  445 gacaccgggacaca 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 20147 - 20231
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||| |||||||  |||| | |||||||||||||||  ||| ||||||||||||||||| |||| || ||||||    
T  20147 gacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 20231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 475
Target Start/End: Original strand, 70286 - 70358
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||||||  | | |||||||||||||||||||||| |||||||||||||||| || | ||||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacac 70358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 241569 - 241653
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||||||||  |||| | ||||||||||| |||  ||| |||||| ||||||||||| ||| |||||||||    
T  241569 gacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcg 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 395 - 461
Target Start/End: Original strand, 8010 - 8075
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    |||| |||||||||||||||||  ||||||||| ||||||||||| |||| ||||||||||||||||    
T  8010 gacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtcggacacga 8075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 8641 - 8725
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||| |||||||||||||| ||||   ||||||||||   ||  ||| ||| |||||| ||||||||||| |||||||||    
T  8641 gacacgacatggacactgacacgtcgacacttctaataatttaggaaaatcacatagttcagtataattataagtgtcggtgtcg 8725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 464
Target Start/End: Original strand, 51791 - 51883
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataag---tatcggtgtcggacacgatac 464  Q
    ||||||||||||||||||  |||| | |||||||||||||||  ||| ||||||||||||||||| |||   | |||||||| ||||||||||    
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttgtcggtgtcagacacgatac 51883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 475
Target Start/End: Original strand, 1652 - 1724
Alignment:
Q  403 taataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    ||||||||||| ||  ||||||||||  || ||||||||||| |||||||||||||||| |||| ||||||||    
T  1652 taataatttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacacatgtccgacac 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 455
Target Start/End: Original strand, 13380 - 13460
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgg 455  Q
    ||||||||||||||||||  |||| |||||||||||||| ||  ||| ||||||||||| ||||| |||  ||||||||||    
T  13380 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcgg 13460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 455
Target Start/End: Complemental strand, 21947 - 21867
Alignment:
Q  375 gacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcgg 455  Q
    ||||||||||||||||||  |||| |||||||||||||| ||  ||| ||||||||||| ||||| |||  ||||||||||    
T  21947 gacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcgg 21867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 46657 - 46741
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||||||||| |||||||  |||| |  ||||||||||||||  ||| ||||||||||||||||| || | |||||||||    
T  46657 gacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 14530 - 14607
Alignment:
Q  395 gacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacacgatacatatccgacac 475  Q
    |||| |||||||||||||||||  ||| ||||||||||||||||| ||||   |||||||||||||| || | ||||||||    
T  14530 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagt---ggtgtcggacacgacacgtgtccgacac 14607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 444
Target Start/End: Original strand, 19551 - 19624
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagt 444  Q
    |||||||||| ||||||||||||  || | |||||||||||||||||  ||| ||||||||||||||||| ||||    
T  19551 gacacgacactgacactgacacgccgatacaactaataatttgaaaa-atcacataattcagtgtaattacaagt 19624  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 453
Target Start/End: Complemental strand, 17824 - 17750
Alignment:
Q  379 cggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtc 453  Q
    |||||| | ||||| ||||| |||||||||||||||||  ||| |||||| |||||||||| |||| ||||||||    
T  17824 cggacaataacacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 23395 - 23479
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||| ||||||||||||  |||| |  |||||| |  ||||  ||| |||||||||||||||||||||| |||||||||    
T  23395 gacacgacacagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 23479  T

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Target: scaffold0083 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 423 - 461
Target Start/End: Complemental strand, 45561 - 45523
Alignment:
Q  423 ataattcagtgtaattataagtatcggtgtcggacacga 461  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  45561 ataattcagtgtaattacaagtgtcggtgtcggacacga 45523  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 454
Target Start/End: Original strand, 56895 - 56981
Alignment:
Q  368 tagacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||| ||||| ||||||||||||||| | |  | ||||||||| ||  | ||||||||||||||||| |||||| || ||||||    
T  56895 tagacacaacacgcacactgacacgttgataaagattataatttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcg 56981  T

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Target: scaffold0722 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 459
Target Start/End: Complemental strand, 7108 - 7027
Alignment:
Q  378 acggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcggacac 459  Q
    ||||||||||| |||| |||| | |||||||||||||||  | | |||||| ||| |||||| |||| | ||||||||||||    
T  7108 acggacactgatacgtcgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcggacac 7027  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 451
Target Start/End: Original strand, 130457 - 130538
Alignment:
Q  370 gacacgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtg 451  Q
    ||||||||||||||| ||||| |  |||| |  ||||| ||||||||  ||| ||||||||||||||||| |||| ||||||    
T  130457 gacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 454
Target Start/End: Complemental strand, 263453 - 263372
Alignment:
Q  373 acgacacggacactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    |||||||||||||||||| ||  |||   |||||||||||| ||   || |||||||||||||||||||||| || ||||||    
T  263453 acgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcg 263372  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 382 - 454
Target Start/End: Complemental strand, 8707 - 8635
Alignment:
Q  382 acactgacacgttgacataactaataatttgaaaatgtcatataattcagtgtaattataagtatcggtgtcg 454  Q
    ||||||||| |  |||| |||||||||||||||||| ||| ||||||| || |||||| || | |||||||||    
T  8707 acactgacatgccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcg 8635  T

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