View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20325_low_11 (Length: 210)
Name: NF20325_low_11
Description: NF20325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20325_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 33789563 - 33789381
Alignment:
| Q |
16 |
agggaaagagcaagaacattaagaagattaataaaatggttggcttcattttggatttgttgctatgcgtagtacttgctttatgaagttagttgttgtg |
115 |
Q |
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| T |
33789563 |
agggaaagagcaagaacattaagaagattaataaaattgttggcttcattttggatttgttgctatgcgtagtacttgctttatgaagttagttgttgtg |
33789464 |
T |
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| Q |
116 |
gattagtatttgacaatggaagggaaatacatctata--tatagtggggattgaaagaaatttttcacttgtcaaagatgatg |
196 |
Q |
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| T |
33789463 |
gattagtatttgacaatggaagggaaatacatctatatatatagtggggattgaaagaaatttttcacttgtcaaagatgatg |
33789381 |
T |
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