View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20325_low_4 (Length: 334)
Name: NF20325_low_4
Description: NF20325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20325_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 13786125 - 13786446
Alignment:
| Q |
10 |
ataattctaattaatttttctctgcgttaaatttcaaagaaacctagatgaacatcctatatcttctgatccatgatccaatgacttaacttctttcacc |
109 |
Q |
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| T |
13786125 |
ataattctaattaattttcccctacgttaaatttcaaagaaacctagatgaacatcctatgtcttctgatccatgatccaatgacttaacttctttcacc |
13786224 |
T |
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| Q |
110 |
aatctagaaaatgtttgtttcaaaacacttttcattgagtgaatcaccattttgatctttaaaattgtaattaagtgttggataatttcgtctttcaaat |
209 |
Q |
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| T |
13786225 |
aatctaaaaaatgtttgtttcaaaacatttttcatcgagtgaatcaccattttgatctttaaaattgtaattaagtgttgaataatttcgtctttcaaat |
13786324 |
T |
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| Q |
210 |
tttcaaattagcaaattagtccatgatattgagcattgtcaatcaaattaattcctacgtcaaccaattcaatcaagtttgataaatttgaatcgtgaaa |
309 |
Q |
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| T |
13786325 |
tttcaaaatagcaaattagttcatgatattgagcattgtcaatcaaattagtttctacgtcaaccaattcaatcaagtttgataaatttgaatcgtgaaa |
13786424 |
T |
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| Q |
310 |
tagagatgaatgtcctaaacaa |
331 |
Q |
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| T |
13786425 |
tagagatgaatgtcctaaacaa |
13786446 |
T |
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