View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20326_high_18 (Length: 218)
Name: NF20326_high_18
Description: NF20326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20326_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 250677 - 250863
Alignment:
| Q |
16 |
atgaagtcaatgaatagttacatcataggaccagtaaattaccccgtcagaaatgaattcttggtttgcaaaatcaagttatactccaatcaaacttgaa |
115 |
Q |
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| T |
250677 |
atgaagtcaatgaatagttacatcataggaccagtaaattaccccgtcagaaatgaattcttggtttgcaaaatcaagttatactccaatcaaacttgaa |
250776 |
T |
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| Q |
116 |
aaaagaaatttgtaaagagactaaaagggtacccccaatgagaacaagaaaattaaatgtgttcatttttacacctatgattataac |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
250777 |
aaaagaaatttgtaaagagactaaaagggtacccccaatgagaacaagaaaattaaatgtgttcatttttacacctatgattataac |
250863 |
T |
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