View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20326_low_12 (Length: 313)
Name: NF20326_low_12
Description: NF20326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20326_low_12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 18 - 313
Target Start/End: Original strand, 7331807 - 7332102
Alignment:
| Q |
18 |
gcatcaaagcaaaatgacataacatggtcgaagattgaaattccaccacaactcaactctacatgatttaccaaactattctttaaacattcgacatgtt |
117 |
Q |
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| T |
7331807 |
gcatcaaagcaaaatgacataacatggtcgaagattgaaattccaccacaactcaactccacatgatttaccaaactattctttaaacattcgacatgtt |
7331906 |
T |
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| Q |
118 |
tctaataatgttttcaaatataaatgtttatatatactccactgtcttcggaatgaagcgaaacataacaatttcacaattcacattgcaatatatagaa |
217 |
Q |
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| T |
7331907 |
tctaataatgttttcaaatataaatgtttatatatactccactgtcttcggaatgaagcgaaacataacaatttcacaattcacattgcaatatatagaa |
7332006 |
T |
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| Q |
218 |
aacataggttctattgttactccaacatgaagaagagaaagttatttggttaaagaagtatacatgttcagtagttcacattcaattaaccaatcc |
313 |
Q |
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| T |
7332007 |
aacataggttctattgttactccaacatcaagaagagaaagttatttggttaaagaagtatacatgttcagtagttcacattcaattaaccaatcc |
7332102 |
T |
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