View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20327_low_1 (Length: 948)

Name: NF20327_low_1
Description: NF20327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20327_low_1
NF20327_low_1
[»] chr1 (22 HSPs)
chr1 (126-609)||(12540793-12541275)
chr1 (487-628)||(12532769-12532914)
chr1 (677-752)||(12532927-12533002)
chr1 (676-739)||(12535404-12535467)
chr1 (677-740)||(6326682-6326745)
chr1 (673-740)||(14508739-14508806)
chr1 (154-269)||(12534973-12535092)
chr1 (454-568)||(12535197-12535311)
chr1 (521-615)||(24621571-24621665)
chr1 (12-77)||(12541275-12541340)
chr1 (523-615)||(23787210-23787302)
chr1 (677-748)||(12540645-12540716)
chr1 (210-261)||(47569740-47569791)
chr1 (520-569)||(12538581-12538630)
chr1 (197-261)||(28239767-28239831)
chr1 (695-742)||(4872623-4872670)
chr1 (101-144)||(12531936-12531979)
chr1 (674-740)||(14470549-14470615)
chr1 (673-751)||(28239151-28239229)
chr1 (211-257)||(14508386-14508432)
chr1 (694-740)||(28326411-28326457)
chr1 (675-740)||(14507267-14507332)
[»] chr6 (3 HSPs)
chr6 (466-615)||(384373-384522)
chr6 (673-740)||(384619-384686)
chr6 (195-254)||(384134-384193)
[»] chr2 (4 HSPs)
chr2 (365-478)||(36007875-36007987)
chr2 (677-740)||(9066378-9066441)
chr2 (674-740)||(9068561-9068627)
chr2 (219-261)||(16375795-16375837)
[»] chr5 (1 HSPs)
chr5 (673-740)||(1717979-1718046)
[»] chr3 (1 HSPs)
chr3 (674-741)||(47924841-47924908)


Alignment Details
Target: chr1 (Bit Score: 178; Significance: 2e-95; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 126 - 609
Target Start/End: Complemental strand, 12541275 - 12540793
Alignment:
Q  126 acatgatcaaattagaatagcattaattaaaacattattattttccagtacacacacttggaagcaaagctatagaagtgaaagtaaaagcagaagcatg 225  Q
    |||||| |||||||||||  ||||||||||  |||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  12541275 acatgaacaaattagaattacattaattaag-cattattattttgcagtgcacacacttggaagcaaagatgtagaagtgaaagtaaaagcagaagcatg 12541177  T
Q  226 gtccttaaattagaaaactagaaagcatgtaatctagaatattcaataggc---aagtagctccttctgtccttcctttgcaacatccatcactatttct 322  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| |  |||   | ||||||||||| |||||||||||| |  |||||||  ||||||     
T  12541176 gtccttaaattaaaaaactagaaagcatgtaatctacaatattccaccggcaggacgtagctccttccgtccttcctttgaaggatccatccttatttca 12541077  T
Q  323 gtattgtacagctagcaccaaattattatttttatcaggcatgctaaggtcaaacaagaacacacttgaaataaatataatcataataattaacctcagt 422  Q
     ||| ||||||||||  |||      |||| |||||||| | ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||    
T  12541076 atatggtacagctagaccca------tattattatcaggaaagctaaggtcaagcaagaacacacatgaaataaatataatcataataattaacctaagt 12540983  T
Q  423 aat-atg--ttccaagaaaaagattggaaaatgacaaactcaactcttccacatttctagcaaccttaactctttcacctttgaacagtccacccctcat 519  Q
    ||| |||  || | ||||||  |   ||||||  |||||||||||||||||  ||||| | ||| |||||| || |||| ||| | ||||||||   ||     
T  12540982 aataatgattttccagaaaacaaacagaaaatctcaaactcaactcttccatctttcttgtaactttaactgttccaccattgtatagtccaccaaccac 12540883  T
Q  520 ggattgataaccagcacgatcaggtttgacaccgcgttttatcagcacagctgctgctcttttaacagctttcacctcttgttctgtaac 609  Q
    ||||||| ||| |||| |||||||||||||||||||||||||||| |||||  ||||||||||| ||||| |||||||||||||||||||    
T  12540882 ggattgacaactagcaagatcaggtttgacaccgcgttttatcagaacagcaactgctcttttagcagctgtcacctcttgttctgtaac 12540793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 487 - 628
Target Start/End: Original strand, 12532769 - 12532914
Alignment:
Q  487 aactctttcacctttgaacagtccacccctcatggattgataaccagcacgatcaggtttgacaccgcgttttatcagcacagctgctgctc--ttttaa 584  Q
    ||||||| |||||||| |||| ||||| |||| ||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||||||  |||||     
T  12532769 aactcttccacctttggacaggccaccactcacggattgataactagcaagattaggtttgacaccgcgttttatcagcacagctactgctcttttttag 12532868  T
Q  585 cagctttcacctcttgttctgtaactaaagt--actgatgtttttt 628  Q
    ||  |||||||||||||||| ||||||||||  |||||||||||||    
T  12532869 cacttttcacctcttgttctttaactaaagtacactgatgtttttt 12532914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 677 - 752
Target Start/End: Original strand, 12532927 - 12533002
Alignment:
Q  677 aattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagatagctatatgtgg 752  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  | |||||||||    
T  12532927 aattctttaaacaaggcaattgcttgtttaaattgaccgttgatgtaatagccatagattagagggttatatgtgg 12533002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 676 - 739
Target Start/End: Original strand, 12535404 - 12535467
Alignment:
Q  676 caattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattaga 739  Q
    ||||||| |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  12535404 caattctctaaacatggcaattgcttgtttaaattgaccggtgatgcaatagccatagattaga 12535467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 677 - 740
Target Start/End: Original strand, 6326682 - 6326745
Alignment:
Q  677 aattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagat 740  Q
    |||| ||||||||||||||||||||||| |||||||| |  |||||||||||||||||||||||    
T  6326682 aattttttaaacaaggcaattgcttgttcaaattgaccgaggatgcaatagccatagattagat 6326745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 673 - 740
Target Start/End: Original strand, 14508739 - 14508806
Alignment:
Q  673 ctccaattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagat 740  Q
    |||||||| | |||||||||||||||||||||||||||||| |  ||||||||| |||||||||||||    
T  14508739 ctccaattttctaaacaaggcaattgcttgtttaaattgaccgacgatgcaataaccatagattagat 14508806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 269
Target Start/End: Original strand, 12534973 - 12535092
Alignment:
Q  154 aaaacattattattttccagtacacacacttggaagcaaagcta----tagaagtgaaagtaaaagcagaagcatggtccttaaattagaaaactagaaa 249  Q
    |||||||  |||||||| ||| ||||||||||||||||||  ||    ||||| ||  ||||||| ||||||||| |||||| |||||||||||||||||    
T  12534973 aaaacatcgttattttctagtgcacacacttggaagcaaacttacatatagaaatgcgagtaaaaacagaagcatagtcctttaattagaaaactagaaa 12535072  T
Q  250 gcatgtaatctagaatattc 269  Q
    ||| ||| |||| |||||||    
T  12535073 gcaagtagtctacaatattc 12535092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 454 - 568
Target Start/End: Original strand, 12535197 - 12535311
Alignment:
Q  454 caaactcaactcttccacatttctagcaaccttaactctttcacctttgaacagtccacccctcatggattgataaccagcacgatcaggtttgacaccg 553  Q
    |||||||| ||||||||| ||||| ||||||||||||||| |||||||| | ||||||||   ||  |||||||| | |||  ||| ||||| ||||||     
T  12535197 caaactcagctcttccacttttcttgcaaccttaactcttccacctttgtatagtccaccaaccacagattgatagctagcgagatgaggttggacacca 12535296  T
Q  554 cgttttatcagcaca 568  Q
    |||||||||||||||    
T  12535297 cgttttatcagcaca 12535311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 521 - 615
Target Start/End: Original strand, 24621571 - 24621665
Alignment:
Q  521 gattgataaccagcacgatcaggtttgacaccgcgttttatcagcacagctgctgctcttttaacagctttcacctcttgttctgtaactaaagt 615  Q
    |||||||||| ||||  || ||||||||||||   |||||||| || || |||||| |||||||||| ||||||||||||||| |||||||||||    
T  24621571 gattgataacaagcaacattaggtttgacaccagcttttatcatcaaagttgctgcacttttaacagatttcacctcttgttcggtaactaaagt 24621665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 12541340 - 12541275
Alignment:
Q  12 aagaatatgtcacaagtcaagacaatcataaggcattattgaagagaaaatataaaacaagaaaca 77  Q
    ||||| |||||||||| ||||||||| ||||||||| ||  |||||||||||||||||||||||||    
T  12541340 aagaaaatgtcacaaggcaagacaatgataaggcataatcaaagagaaaatataaaacaagaaaca 12541275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 523 - 615
Target Start/End: Complemental strand, 23787302 - 23787210
Alignment:
Q  523 ttgataaccagcacgatcaggtttgacaccgcgttttatcagcacagctgctgctcttttaacagctttcacctcttgttctgtaactaaagt 615  Q
    |||||||| ||||  || ||||||||||||   |||||||| || || |||||| |||||||||| ||||||||||||||| |||||||||||    
T  23787302 ttgataacaagcaacattaggtttgacaccagcttttatcaccaaagttgctgcacttttaacagatttcacctcttgttcggtaactaaagt 23787210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 677 - 748
Target Start/End: Complemental strand, 12540716 - 12540645
Alignment:
Q  677 aattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagatagctatat 748  Q
    |||||| ||||||||||||||||||| ||||||||||   |||||||||||||||||| |||| ||| ||||    
T  12540716 aattctctaaacaaggcaattgcttgcttaaattgaccagtgatgcaatagccatagactagacagcaatat 12540645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 47569791 - 47569740
Alignment:
Q  210 taaaagcagaagcatggtccttaaattagaaaactagaaagcatgtaatcta 261  Q
    |||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  47569791 taaaagcaaaaacatagtccttaaattagaaaactagaaagcatgtaatcta 47569740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 520 - 569
Target Start/End: Original strand, 12538581 - 12538630
Alignment:
Q  520 ggattgataaccagcacgatcaggtttgacaccgcgttttatcagcacag 569  Q
    ||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  12538581 ggattgataactagcaagatcaggtttgacaccgcgttttatctgcacag 12538630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 28239831 - 28239767
Alignment:
Q  197 atagaagtgaaagtaaaagcagaagcatggtccttaaattagaaaactagaaagcatgtaatcta 261  Q
    ||||||||| || |||||||| || ||  ||||||||||||| ||||||||||||||||||||||    
T  28239831 atagaagtgcaattaaaagcaaaaacaaagtccttaaattagcaaactagaaagcatgtaatcta 28239767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 695 - 742
Target Start/End: Complemental strand, 4872670 - 4872623
Alignment:
Q  695 attgcttgtttaaattgactgttgatgcaatagccatagattagatag 742  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||||    
T  4872670 attgcttgtttaaattgaccgaggatgcaatagccatagattagatag 4872623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 12531936 - 12531979
Alignment:
Q  101 gaacatatatgggccaaatacgcagacatgatcaaattagaata 144  Q
    |||||||||| ||||||||||||||||| |||||||||||||||    
T  12531936 gaacatatatcggccaaatacgcagacacgatcaaattagaata 12531979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 674 - 740
Target Start/End: Original strand, 14470549 - 14470615
Alignment:
Q  674 tccaattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagat 740  Q
    ||||||||| |||||||||||||||||| |||||||||||   |||||||| | ||| |||||||||    
T  14470549 tccaattctctaaacaaggcaattgcttttttaaattgaccaatgatgcaacaaccaaagattagat 14470615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 673 - 751
Target Start/End: Complemental strand, 28239229 - 28239151
Alignment:
Q  673 ctccaattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagatagctatatgtg 751  Q
    |||||||||| |||| ||| ||||||| ||||||||||||| |  ||||||||| ||||||| |||||  |||||||||    
T  28239229 ctccaattctataaagaagtcaattgcctgtttaaattgaccgaggatgcaataaccatagactagatgactatatgtg 28239151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 14508386 - 14508432
Alignment:
Q  211 aaaagcagaagcatggtccttaaattagaaaactagaaagcatgtaa 257  Q
    ||||||| |||||| |||||| |||||||||| ||||||||||||||    
T  14508386 aaaagcaaaagcatagtcctttaattagaaaaatagaaagcatgtaa 14508432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 694 - 740
Target Start/End: Complemental strand, 28326457 - 28326411
Alignment:
Q  694 aattgcttgtttaaattgactgttgatgcaatagccatagattagat 740  Q
    |||||||||||||||||||| | |||| ||||||||| |||||||||    
T  28326457 aattgcttgtttaaattgaccgatgatacaatagccaaagattagat 28326411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 740
Target Start/End: Original strand, 14507267 - 14507332
Alignment:
Q  675 ccaattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagat 740  Q
    |||||||| |||||||||||||||||| || ||||||||    ||||||| ||||| |||||||||    
T  14507267 ccaattctctaaacaaggcaattgctttttcaaattgaccaacgatgcaacagccaaagattagat 14507332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 2e-33; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 466 - 615
Target Start/End: Original strand, 384373 - 384522
Alignment:
Q  466 ttccacatttctagcaaccttaactctttcacctttgaacagtccacccctcatggattgataaccagcacgatcaggtttgacaccgcgttttatcagc 565  Q
    |||||| ||||| |||| |||||||||| |||||||||||||||||||  |||  || ||| || ||||| ||| |||||||||||||||||| ||||||    
T  384373 ttccacctttcttgcaatcttaactcttccacctttgaacagtccaccaatcacagactgacaagcagcaagattaggtttgacaccgcgtttaatcagc 384472  T
Q  566 acagctgctgctcttttaacagctttcacctcttgttctgtaactaaagt 615  Q
    |||||| | ||||||||| ||| ||| |||||||||||||||||||||||    
T  384473 acagctacggctcttttagcagatttgacctcttgttctgtaactaaagt 384522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 673 - 740
Target Start/End: Original strand, 384619 - 384686
Alignment:
Q  673 ctccaattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagat 740  Q
    |||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||||||||||||    
T  384619 ctccaattctttaaacaaggcaattgcttgtttaaattgacgagtgatgcaatggacatagattagat 384686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 384134 - 384193
Alignment:
Q  195 ctatagaagtgaaagtaaaagcagaagcatggtccttaaattagaaaactagaaagcatg 254  Q
    ||||||||||| || ||||||||||||||| || | ||||||||||||||||||||||||    
T  384134 ctatagaagtgcaactaaaagcagaagcatagtgcataaattagaaaactagaaagcatg 384193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 1e-19; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 365 - 478
Target Start/End: Original strand, 36007875 - 36007987
Alignment:
Q  365 gctaaggtcaaacaagaacacacttgaaataaatataatcataataattaacctcagtaat-atgttccaagaaaaagattggaaaatgacaaactcaac 463  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||| || |||| ||||| | |  |||||||  ||||||||||    
T  36007875 gctaaggtcaagcaagaacacccttgaaataaatataatcaaaataattaacctcagtaatgattttcc-agaaaca-aacggaaaatctcaaactcaac 36007972  T
Q  464 tcttccacatttcta 478  Q
    |||||||| ||||||    
T  36007973 tcttccacctttcta 36007987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 677 - 740
Target Start/End: Complemental strand, 9066441 - 9066378
Alignment:
Q  677 aattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagat 740  Q
    |||||| ||||||||||||||||| |||||||||||| |  ||| ||||| |||||||||||||    
T  9066441 aattctctaaacaaggcaattgctggtttaaattgaccgacgatacaataaccatagattagat 9066378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 674 - 740
Target Start/End: Complemental strand, 9068627 - 9068561
Alignment:
Q  674 tccaattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagat 740  Q
    ||||||||| ||||||||||||   |||||||||||||||    |||||||||||||||||||||||    
T  9068627 tccaattctctaaacaaggcaacaacttgtttaaattgaccaacgatgcaatagccatagattagat 9068561  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 16375837 - 16375795
Alignment:
Q  219 aagcatggtccttaaattagaaaactagaaagcatgtaatcta 261  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||    
T  16375837 aagcatgatcctttaattagaaaactacaaagcatgtaatcta 16375795  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 673 - 740
Target Start/End: Complemental strand, 1718046 - 1717979
Alignment:
Q  673 ctccaattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagat 740  Q
    |||||||| | ||||||||||||||||||||||||||||||    ||||||||| |||||||||||||    
T  1718046 ctccaattttctaaacaaggcaattgcttgtttaaattgaccaacgatgcaataaccatagattagat 1717979  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 674 - 741
Target Start/End: Original strand, 47924841 - 47924908
Alignment:
Q  674 tccaattctttaaacaaggcaattgcttgtttaaattgactgttgatgcaatagccatagattagata 741  Q
    ||||||||| ||| ||||||||| ||||||||||||| || | ||||||||||||||| |||||||||    
T  47924841 tccaattctctaagcaaggcaatcgcttgtttaaattcaccgatgatgcaatagccattgattagata 47924908  T

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