View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20328_low_19 (Length: 280)
Name: NF20328_low_19
Description: NF20328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20328_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 14008603 - 14008359
Alignment:
| Q |
18 |
ggcaatgaatgaggaagaagtaagaagcatccatgagaggcttcttagggctaatacaaaagattatggacgatatgatccatcgccaactttttctaag |
117 |
Q |
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| T |
14008603 |
ggcaatgaatgaggaagaagtaagaagcatccatgagaggcttcttagggctaatacaaaagattatggacgatatgatccatcgccaactttttctaag |
14008504 |
T |
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| Q |
118 |
cctcctttcaagctcataccaaattgaatgaacacgttcaaaaaatgaatcttgatatagttggaagttggtatggataatataagtactataaataaat |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
14008503 |
cctcctttcaagctcataccaaattgaatgaacacgttcaaaaaatgaatcttgatatagttggaagttggtatggataatataattactataaataaat |
14008404 |
T |
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| Q |
218 |
aattaacccactgtttaattatcttagtgtaatatatgcttccat |
262 |
Q |
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| T |
14008403 |
aattaacccactgtttaattatcttagtgtaatatatgcttccat |
14008359 |
T |
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