View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20329_low_11 (Length: 222)

Name: NF20329_low_11
Description: NF20329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20329_low_11
NF20329_low_11
[»] chr3 (61 HSPs)
chr3 (5-215)||(33341812-33342022)
chr3 (5-215)||(7853913-7854123)
chr3 (5-215)||(54685415-54685625)
chr3 (40-214)||(17956099-17956274)
chr3 (27-214)||(30152893-30153082)
chr3 (36-214)||(45581591-45581771)
chr3 (48-214)||(54038239-54038406)
chr3 (60-204)||(16996176-16996321)
chr3 (52-204)||(19570805-19570957)
chr3 (5-144)||(19946629-19946768)
chr3 (64-204)||(50112168-50112309)
chr3 (52-201)||(317628-317778)
chr3 (48-214)||(3992522-3992690)
chr3 (52-204)||(22144389-22144542)
chr3 (58-201)||(16182065-16182209)
chr3 (57-214)||(53771022-53771181)
chr3 (48-214)||(23492346-23492513)
chr3 (84-214)||(16261463-16261593)
chr3 (80-204)||(12349847-12349970)
chr3 (52-204)||(13817492-13817642)
chr3 (57-214)||(2844172-2844331)
chr3 (52-204)||(35123674-35123826)
chr3 (52-204)||(6154448-6154600)
chr3 (52-204)||(14298399-14298551)
chr3 (52-204)||(14304026-14304178)
chr3 (57-204)||(53898572-53898719)
chr3 (36-204)||(17523006-17523176)
chr3 (57-214)||(38167896-38168054)
chr3 (52-204)||(6146863-6147015)
chr3 (5-144)||(47784924-47785064)
chr3 (52-204)||(14295415-14295569)
chr3 (58-204)||(17100636-17100783)
chr3 (58-204)||(17101321-17101468)
chr3 (48-201)||(11329081-11329235)
chr3 (41-182)||(17139474-17139616)
chr3 (48-182)||(14528151-14528286)
chr3 (5-86)||(9303343-9303425)
chr3 (57-149)||(28558188-28558282)
chr3 (48-195)||(12560362-12560510)
chr3 (48-204)||(54423986-54424142)
chr3 (57-204)||(19260956-19261104)
chr3 (48-174)||(55440996-55441123)
chr3 (52-204)||(14301042-14301196)
chr3 (57-204)||(12349656-12349809)
chr3 (32-182)||(12488865-12489017)
chr3 (57-120)||(14059414-14059478)
chr3 (42-181)||(17204667-17204807)
chr3 (33-159)||(38811170-38811297)
chr3 (32-144)||(1990759-1990873)
chr3 (33-114)||(17960520-17960602)
chr3 (151-213)||(34439451-34439513)
chr3 (85-196)||(8631801-8631912)
chr3 (41-157)||(9590918-9591035)
chr3 (27-144)||(12952915-12953034)
chr3 (82-201)||(17938582-17938701)
chr3 (41-182)||(15876034-15876176)
chr3 (57-144)||(3576615-3576703)
chr3 (82-182)||(16880131-16880231)
chr3 (174-214)||(28558271-28558311)
chr3 (33-144)||(34559857-34559969)
chr3 (42-116)||(17191511-17191583)
[»] chr5 (30 HSPs)
chr5 (6-204)||(11583982-11584184)
chr5 (48-214)||(2031783-2031950)
chr5 (27-214)||(11342635-11342825)
chr5 (27-204)||(1168321-1168500)
chr5 (52-204)||(28261498-28261651)
chr5 (48-214)||(21204898-21205066)
chr5 (59-204)||(21397073-21397222)
chr5 (52-203)||(21646857-21647009)
chr5 (52-204)||(11337303-11337455)
chr5 (52-204)||(24475560-24475708)
chr5 (52-204)||(4865239-4865393)
chr5 (36-204)||(20712036-20712206)
chr5 (48-214)||(21650668-21650835)
chr5 (5-87)||(16105573-16105656)
chr5 (83-203)||(21906729-21906846)
chr5 (5-87)||(109075-109158)
chr5 (80-204)||(24183249-24183370)
chr5 (41-195)||(19405503-19405658)
chr5 (33-201)||(7728378-7728547)
chr5 (52-174)||(23466434-23466557)
chr5 (32-201)||(3673818-3673989)
chr5 (33-182)||(21616974-21617124)
chr5 (32-195)||(23493875-23494040)
chr5 (41-116)||(16595474-16595550)
chr5 (33-116)||(32966352-32966436)
chr5 (49-201)||(19862183-19862336)
chr5 (6-44)||(24225596-24225634)
chr5 (32-144)||(6456580-6456694)
chr5 (33-144)||(37983325-37983434)
chr5 (41-144)||(29917931-29918035)
[»] chr6 (32 HSPs)
chr6 (5-214)||(18583264-18583457)
chr6 (40-214)||(35015272-35015447)
chr6 (40-204)||(19983416-19983581)
chr6 (57-214)||(26089718-26089875)
chr6 (52-203)||(25744331-25744483)
chr6 (5-144)||(18823573-18823712)
chr6 (48-214)||(18002611-18002777)
chr6 (64-204)||(32898779-32898920)
chr6 (57-214)||(23994904-23995063)
chr6 (5-144)||(18839428-18839567)
chr6 (52-204)||(22440911-22441064)
chr6 (52-201)||(31628245-31628395)
chr6 (48-210)||(15742339-15742505)
chr6 (48-203)||(18777119-18777275)
chr6 (52-204)||(13014826-13014979)
chr6 (5-87)||(4991002-4991085)
chr6 (58-201)||(16086001-16086144)
chr6 (58-201)||(18432626-18432770)
chr6 (27-201)||(18398890-18399065)
chr6 (40-201)||(18381803-18381965)
chr6 (67-204)||(18570271-18570409)
chr6 (5-116)||(17083383-17083496)
chr6 (33-201)||(22361885-22362054)
chr6 (57-182)||(25367376-25367502)
chr6 (52-201)||(16106499-16106643)
chr6 (48-156)||(28195259-28195367)
chr6 (57-114)||(15740211-15740269)
chr6 (41-146)||(18629786-18629892)
chr6 (36-182)||(25651197-25651345)
chr6 (33-116)||(25919571-25919655)
chr6 (57-116)||(33324675-33324735)
chr6 (57-116)||(35136217-35136277)
[»] scaffold1867 (1 HSPs)
scaffold1867 (5-204)||(75-274)
[»] chr8 (40 HSPs)
chr8 (48-214)||(41506924-41507091)
chr8 (40-214)||(24716977-24717152)
chr8 (67-214)||(39115267-39115415)
chr8 (52-201)||(41246635-41246785)
chr8 (52-204)||(19993171-19993324)
chr8 (57-204)||(22234920-22235068)
chr8 (52-204)||(20573309-20573461)
chr8 (36-214)||(16038996-16039176)
chr8 (80-204)||(37611675-37611798)
chr8 (48-214)||(274416-274583)
chr8 (48-214)||(641266-641433)
chr8 (48-214)||(827072-827239)
chr8 (36-204)||(20481565-20481735)
chr8 (64-201)||(20647949-20648087)
chr8 (64-201)||(20654025-20654163)
chr8 (41-195)||(39446892-39447046)
chr8 (52-120)||(20567200-20567268)
chr8 (52-144)||(20567335-20567427)
chr8 (52-144)||(20573528-20573620)
chr8 (52-156)||(25122513-25122618)
chr8 (33-195)||(38533607-38533770)
chr8 (27-137)||(29759893-29760005)
chr8 (33-182)||(5854572-5854722)
chr8 (57-193)||(21680984-21681121)
chr8 (33-113)||(22736046-22736127)
chr8 (40-201)||(23837163-23837325)
chr8 (52-116)||(15969796-15969860)
chr8 (84-214)||(24385867-24385988)
chr8 (33-182)||(26011452-26011602)
chr8 (40-111)||(21198362-21198434)
chr8 (32-182)||(33528383-33528533)
chr8 (33-182)||(15933256-15933406)
chr8 (148-201)||(20561751-20561804)
chr8 (32-157)||(23226240-23226368)
chr8 (32-158)||(23149736-23149865)
chr8 (40-109)||(24929018-24929087)
chr8 (40-157)||(31194488-31194606)
chr8 (40-116)||(17285232-17285309)
chr8 (32-146)||(22742717-22742833)
chr8 (41-144)||(27233244-27233348)
[»] scaffold0833 (1 HSPs)
scaffold0833 (5-182)||(3230-3407)
[»] scaffold0120 (2 HSPs)
scaffold0120 (5-204)||(21442-21642)
scaffold0120 (5-204)||(31141-31341)
[»] scaffold0158 (2 HSPs)
scaffold0158 (5-204)||(24890-25088)
scaffold0158 (74-204)||(25212-25341)
[»] chr7 (37 HSPs)
chr7 (48-214)||(111384-111550)
chr7 (27-214)||(126366-126555)
chr7 (36-214)||(32494161-32494341)
chr7 (5-201)||(7284180-7284376)
chr7 (52-204)||(39046740-39046893)
chr7 (48-204)||(11287390-11287547)
chr7 (57-211)||(42056407-42056563)
chr7 (52-204)||(35094794-35094946)
chr7 (57-214)||(2190301-2190460)
chr7 (52-204)||(12758965-12759117)
chr7 (57-214)||(3049565-3049723)
chr7 (48-214)||(2028893-2029061)
chr7 (52-204)||(15822548-15822701)
chr7 (40-214)||(1937127-1937290)
chr7 (52-182)||(45452305-45452435)
chr7 (48-204)||(3894998-3895155)
chr7 (41-204)||(16570122-16570287)
chr7 (41-204)||(16595375-16595540)
chr7 (57-201)||(26070384-26070529)
chr7 (57-201)||(26094171-26094316)
chr7 (52-204)||(47289758-47289911)
chr7 (48-204)||(12248237-12248395)
chr7 (52-204)||(44865204-44865360)
chr7 (41-182)||(49047813-49047955)
chr7 (41-204)||(13274753-13274918)
chr7 (5-158)||(14272049-14272203)
chr7 (52-204)||(143622-143769)
chr7 (40-211)||(17224047-17224220)
chr7 (36-204)||(12369957-12370127)
chr7 (33-182)||(16915067-16915217)
chr7 (33-182)||(48356602-48356752)
chr7 (32-211)||(13377485-13377667)
chr7 (32-144)||(4484683-4484797)
chr7 (32-111)||(4446168-4446249)
chr7 (32-111)||(14935319-14935400)
chr7 (32-111)||(15362912-15362993)
chr7 (33-116)||(34241393-34241477)
[»] scaffold0686 (1 HSPs)
scaffold0686 (40-214)||(6198-6373)
[»] scaffold0184 (1 HSPs)
scaffold0184 (40-214)||(31395-31570)
[»] scaffold0078 (1 HSPs)
scaffold0078 (40-214)||(41274-41449)
[»] chr4 (36 HSPs)
chr4 (27-214)||(14951713-14951902)
chr4 (40-214)||(25119322-25119498)
chr4 (52-204)||(53704850-53705003)
chr4 (40-214)||(5682642-5682817)
chr4 (27-208)||(55376710-55376893)
chr4 (40-204)||(34395222-34395387)
chr4 (52-208)||(23270047-23270204)
chr4 (52-204)||(44055892-44056045)
chr4 (52-204)||(16732146-16732299)
chr4 (64-204)||(44346816-44346957)
chr4 (52-202)||(53907818-53907966)
chr4 (57-214)||(15272427-15272586)
chr4 (52-204)||(30457880-30458033)
chr4 (67-204)||(21959580-21959718)
chr4 (58-204)||(820033-820177)
chr4 (96-204)||(8872588-8872699)
chr4 (5-107)||(16522748-16522851)
chr4 (57-204)||(12837317-12837464)
chr4 (57-204)||(30232613-30232761)
chr4 (48-182)||(18494467-18494602)
chr4 (5-107)||(9295624-9295727)
chr4 (57-195)||(13809636-13809775)
chr4 (80-203)||(45458973-45459096)
chr4 (41-181)||(27960938-27961078)
chr4 (33-116)||(37957230-37957314)
chr4 (5-182)||(7185983-7186159)
chr4 (33-142)||(7964890-7965000)
chr4 (80-201)||(52265628-52265749)
chr4 (33-116)||(19821981-19822065)
chr4 (32-201)||(15044784-15044955)
chr4 (32-211)||(15109458-15109640)
chr4 (40-116)||(14901197-14901274)
chr4 (40-116)||(47535251-47535328)
chr4 (40-158)||(41166109-41166228)
chr4 (32-144)||(41256546-41256660)
chr4 (33-181)||(18276392-18276541)
[»] scaffold0039 (2 HSPs)
scaffold0039 (48-214)||(12635-12802)
scaffold0039 (48-181)||(19049-19183)
[»] scaffold0034 (3 HSPs)
scaffold0034 (57-214)||(79846-80004)
scaffold0034 (80-204)||(46171-46295)
scaffold0034 (80-204)||(40664-40788)
[»] chr1 (25 HSPs)
chr1 (27-214)||(22366970-22367158)
chr1 (48-214)||(21859984-21860151)
chr1 (27-214)||(15861541-15861728)
chr1 (45-214)||(44035086-44035255)
chr1 (52-204)||(49967628-49967780)
chr1 (52-204)||(35522436-35522588)
chr1 (52-204)||(41212046-41212202)
chr1 (52-204)||(21718206-21718358)
chr1 (57-204)||(22403227-22403375)
chr1 (36-204)||(35054716-35054886)
chr1 (41-180)||(51627805-51627945)
chr1 (48-204)||(27329872-27330026)
chr1 (33-116)||(27674755-27674838)
chr1 (34-116)||(22829629-22829712)
chr1 (80-182)||(9784239-9784341)
chr1 (33-182)||(17608886-17609036)
chr1 (33-116)||(19603055-19603139)
chr1 (33-113)||(38033882-38033962)
chr1 (40-144)||(20177140-20177245)
chr1 (33-116)||(20955644-20955728)
chr1 (41-144)||(21194980-21195084)
chr1 (40-158)||(13377003-13377122)
chr1 (33-159)||(37234022-37234149)
chr1 (134-201)||(9784184-9784248)
chr1 (40-111)||(41229149-41229221)
[»] scaffold0310 (2 HSPs)
scaffold0310 (5-201)||(234-430)
scaffold0310 (5-81)||(6603-6679)
[»] scaffold0016 (4 HSPs)
scaffold0016 (40-214)||(162293-162469)
scaffold0016 (64-204)||(164204-164345)
scaffold0016 (40-214)||(166379-166547)
scaffold0016 (40-144)||(116690-116795)
[»] scaffold0116 (1 HSPs)
scaffold0116 (40-185)||(30056-30202)
[»] chr2 (27 HSPs)
chr2 (40-214)||(22274688-22274862)
chr2 (52-204)||(23836822-23836975)
chr2 (40-214)||(22283921-22284095)
chr2 (52-204)||(32465835-32465988)
chr2 (36-204)||(25876036-25876206)
chr2 (48-214)||(9653011-9653179)
chr2 (5-158)||(19433495-19433649)
chr2 (60-214)||(21274164-21274319)
chr2 (52-203)||(4448251-4448402)
chr2 (52-208)||(6879414-6879571)
chr2 (52-204)||(28974026-28974179)
chr2 (52-204)||(271148-271300)
chr2 (40-204)||(25601989-25602154)
chr2 (36-201)||(36890805-36890972)
chr2 (52-168)||(27261783-27261900)
chr2 (5-87)||(24826961-24827044)
chr2 (33-159)||(3403-3529)
chr2 (41-181)||(22579999-22580140)
chr2 (5-107)||(25212977-25213081)
chr2 (41-204)||(24571408-24571572)
chr2 (5-67)||(43645824-43645886)
chr2 (33-116)||(722353-722437)
chr2 (36-201)||(67952-68119)
chr2 (32-73)||(24884643-24884684)
chr2 (46-116)||(25305416-25305487)
chr2 (36-159)||(23821767-23821892)
chr2 (36-159)||(23830846-23830971)
[»] scaffold0342 (1 HSPs)
scaffold0342 (45-214)||(566-736)
[»] scaffold0396 (1 HSPs)
scaffold0396 (59-204)||(11825-11970)
[»] scaffold0091 (2 HSPs)
scaffold0091 (52-204)||(32180-32333)
scaffold0091 (52-204)||(41970-42123)
[»] scaffold0021 (3 HSPs)
scaffold0021 (52-204)||(132367-132520)
scaffold0021 (48-204)||(11660-11818)
scaffold0021 (88-203)||(88289-88404)
[»] scaffold0001 (2 HSPs)
scaffold0001 (52-204)||(70739-70892)
scaffold0001 (52-208)||(60784-60940)
[»] scaffold0597 (1 HSPs)
scaffold0597 (48-214)||(1093-1261)
[»] scaffold0480 (2 HSPs)
scaffold0480 (52-204)||(5363-5516)
scaffold0480 (48-204)||(8998-9156)
[»] scaffold0251 (2 HSPs)
scaffold0251 (48-214)||(13501-13669)
scaffold0251 (57-214)||(21475-21634)
[»] scaffold0175 (1 HSPs)
scaffold0175 (48-214)||(14921-15089)
[»] scaffold0008 (1 HSPs)
scaffold0008 (52-204)||(22668-22821)
[»] scaffold0234 (1 HSPs)
scaffold0234 (48-214)||(17519-17686)
[»] scaffold0673 (2 HSPs)
scaffold0673 (52-204)||(6962-7118)
scaffold0673 (52-204)||(939-1092)
[»] scaffold0035 (2 HSPs)
scaffold0035 (48-201)||(109582-109736)
scaffold0035 (48-203)||(118081-118237)
[»] scaffold0011 (2 HSPs)
scaffold0011 (52-204)||(254931-255084)
scaffold0011 (52-204)||(261537-261690)
[»] scaffold0083 (2 HSPs)
scaffold0083 (52-204)||(14854-15004)
scaffold0083 (52-145)||(14194-14288)
[»] scaffold0240 (1 HSPs)
scaffold0240 (59-204)||(7556-7699)
[»] scaffold0014 (2 HSPs)
scaffold0014 (64-201)||(85321-85459)
scaffold0014 (48-212)||(159275-159438)
[»] scaffold0610 (1 HSPs)
scaffold0610 (52-204)||(693-846)
[»] scaffold0044 (1 HSPs)
scaffold0044 (64-204)||(38287-38428)
[»] scaffold0032 (3 HSPs)
scaffold0032 (48-214)||(55553-55721)
scaffold0032 (33-120)||(93973-94061)
scaffold0032 (57-144)||(104799-104887)
[»] scaffold0012 (1 HSPs)
scaffold0012 (40-204)||(253106-253271)
[»] scaffold0190 (1 HSPs)
scaffold0190 (41-204)||(9903-10067)
[»] scaffold0077 (1 HSPs)
scaffold0077 (36-204)||(15588-15761)
[»] scaffold0706 (1 HSPs)
scaffold0706 (57-214)||(6658-6816)
[»] scaffold0338 (1 HSPs)
scaffold0338 (48-204)||(8960-9117)
[»] scaffold0195 (1 HSPs)
scaffold0195 (52-204)||(635-788)
[»] scaffold0004 (2 HSPs)
scaffold0004 (48-214)||(193603-193770)
scaffold0004 (57-214)||(186641-186799)
[»] scaffold0359 (2 HSPs)
scaffold0359 (58-201)||(1300-1444)
scaffold0359 (52-204)||(11771-11921)
[»] scaffold0574 (1 HSPs)
scaffold0574 (48-214)||(9622-9789)
[»] scaffold0037 (2 HSPs)
scaffold0037 (48-214)||(94948-95115)
scaffold0037 (48-204)||(24845-25002)
[»] scaffold0465 (1 HSPs)
scaffold0465 (48-201)||(10094-10248)
[»] scaffold0150 (2 HSPs)
scaffold0150 (5-111)||(28466-28573)
scaffold0150 (5-55)||(21637-21687)
[»] scaffold0022 (3 HSPs)
scaffold0022 (52-204)||(112662-112812)
scaffold0022 (41-182)||(109556-109698)
scaffold0022 (33-120)||(103123-103211)
[»] scaffold0025 (1 HSPs)
scaffold0025 (36-204)||(146561-146731)
[»] scaffold1164 (1 HSPs)
scaffold1164 (27-178)||(1332-1485)
[»] scaffold0160 (2 HSPs)
scaffold0160 (57-204)||(3-151)
scaffold0160 (48-144)||(3492-3589)
[»] scaffold0075 (1 HSPs)
scaffold0075 (40-201)||(4906-5068)
[»] scaffold0117 (1 HSPs)
scaffold0117 (52-201)||(11688-11837)
[»] scaffold0068 (2 HSPs)
scaffold0068 (52-213)||(48124-48286)
scaffold0068 (52-213)||(61572-61734)
[»] scaffold0028 (3 HSPs)
scaffold0028 (5-107)||(130486-130589)
scaffold0028 (57-182)||(79521-79647)
scaffold0028 (135-204)||(89586-89655)
[»] scaffold0303 (1 HSPs)
scaffold0303 (57-214)||(143-301)
[»] scaffold0095 (1 HSPs)
scaffold0095 (41-195)||(33854-34008)
[»] scaffold0103 (1 HSPs)
scaffold0103 (80-201)||(33668-33789)
[»] scaffold0122 (1 HSPs)
scaffold0122 (48-146)||(24372-24471)
[»] scaffold0031 (3 HSPs)
scaffold0031 (41-179)||(31010-31149)
scaffold0031 (137-195)||(70676-70734)
scaffold0031 (33-116)||(97403-97487)
[»] scaffold0554 (1 HSPs)
scaffold0554 (48-159)||(1889-2001)
[»] scaffold0053 (1 HSPs)
scaffold0053 (40-201)||(76967-77129)
[»] scaffold0080 (1 HSPs)
scaffold0080 (33-144)||(43975-44087)
[»] scaffold1272 (1 HSPs)
scaffold1272 (36-158)||(270-393)
[»] scaffold0740 (2 HSPs)
scaffold0740 (140-203)||(4351-4414)
scaffold0740 (52-120)||(4284-4353)
[»] scaffold0589 (1 HSPs)
scaffold0589 (48-118)||(7807-7878)
[»] scaffold0092 (1 HSPs)
scaffold0092 (64-174)||(3308-3419)
[»] scaffold0483 (1 HSPs)
scaffold0483 (36-121)||(6622-6708)
[»] scaffold0009 (1 HSPs)
scaffold0009 (33-182)||(69415-69565)
[»] scaffold0700 (1 HSPs)
scaffold0700 (33-195)||(2483-2646)
[»] scaffold0231 (1 HSPs)
scaffold0231 (8-65)||(12990-13048)
[»] scaffold0013 (1 HSPs)
scaffold0013 (40-116)||(35444-35520)
[»] scaffold1734 (1 HSPs)
scaffold1734 (40-97)||(1364-1422)
[»] scaffold0017 (1 HSPs)
scaffold0017 (5-45)||(12694-12734)
[»] scaffold0244 (1 HSPs)
scaffold0244 (48-118)||(22715-22786)
[»] scaffold0243 (1 HSPs)
scaffold0243 (32-201)||(2436-2607)
[»] scaffold0090 (1 HSPs)
scaffold0090 (5-40)||(3392-3427)
[»] scaffold0020 (1 HSPs)
scaffold0020 (32-144)||(107967-108080)
[»] scaffold0335 (1 HSPs)
scaffold0335 (36-87)||(5823-5875)


Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 33341812 - 33342022
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33341812 acataatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 33341911  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33341912 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcataattcatcaacaaccatgcataattcaccaattgag 33342011  T
Q  205 tataatttacc 215  Q
     ||||||||||    
T  33342012 cataatttacc 33342022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 7853913 - 7854123
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7853913 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgattcatgcaaacccaagc 7854012  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||     
T  7854013 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgaa 7854112  T
Q  205 tataatttacc 215  Q
     ||||||||||    
T  7854113 cataatttacc 7854123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 54685625 - 54685415
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  54685625 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccagcaacagcaactcatttctcaacaacaatcatgaatcatgcaaatccaagc 54685526  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  54685525 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 54685426  T
Q  205 tataatttacc 215  Q
     ||||||||||    
T  54685425 cataatttacc 54685415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 17956274 - 17956099
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||||| |||| || ||||||||  ||||||||||||||||    
T  17956274 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgactaaacaaca 17956175  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  17956174 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataatacaccaattgagtataatttac 17956099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 30152893 - 30153082
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||| || ||| |||| |||||||  |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  30152893 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 30152992  T
Q  125 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  30152993 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 30153082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 36 - 214
Target Start/End: Original strand, 45581591 - 45581771
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||| | ||||||||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  45581591 acccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaa 45581690  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  45581691 caacaacaacaaccattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataatttac 45581771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 54038406 - 54038239
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||| | |||||| |||||||| | |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  54038406 aaaccaacaacaacaatttatttcttaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaactatatgactaaacaacaacaacaac 54038307  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||| |||||||||||||||| | ||||||||||||||||||||||||||||||| || |||||||||    
T  54038306 cattaatcatgaaacatatcacatttcatcaacaaccatgcataattcaccaatttagcataatttac 54038239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 60 - 204
Target Start/End: Complemental strand, 16996321 - 16996176
Alignment:
Q  60 acaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 158  Q
    |||||||||||||||||||||| | | |||| |||||||| |||||||||||||||||||||  | |||||||||||||||||||||| |||||||||||    
T  16996321 acaactcatttctcaacaacaaaccaagaattatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatcatga 16996222  T
Q  159 aacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||    
T  16996221 aacatatcacaattcatcaacaacaatgcataattcaccaattgag 16996176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 19570957 - 19570805
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||||||||||||||| || |||| |||||||| |||||||||||||||||||||  | |||||||||||||||||||||| ||||    
T  19570957 caccaacaacatctcatttctcaacaacaaccaagaattatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaattg 19570858  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| |||||| ||||||| |||||||||||||||||||||    
T  19570857 atcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgag 19570805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 19946629 - 19946768
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19946629 acatcatcaaaatcaaacttctatattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 19946728  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaaca 144  Q
    |||| |||||||||||  | |||||  | |||||||||||    
T  19946729 catggattatcatcaacaacatgacatatcaacaacaaca 19946768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 204
Target Start/End: Complemental strand, 50112309 - 50112168
Alignment:
Q  64 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 162  Q
    |||||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||  | |||||||||||||||||||| | ||||||||||||||     
T  50112309 ctcatttctcaaaaacaaaccatgaatcatgcaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaact 50112210  T
Q  163 tatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  50112209 tatcacaattcatcaacaacaatgcataattcaccaattgag 50112168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 52 - 201
Target Start/End: Complemental strand, 317778 - 317628
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||| ||||||| | | |||| || ||||| |||||||||||||||||||||  | |||||||||||||||||||||| |||    
T  317778 caccaacaacatctcatttctccacaacaaaccaagaattatacaaactcaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaatt 317679  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  317678 gatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaatt 317628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 3992522 - 3992690
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||||| | ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  3992522 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 3992621  T
Q  146 ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  3992622 ctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 3992690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 22144542 - 22144389
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| ||||||||||||| |||| | ||||||||||||||||||||||||| |||||||||||  | ||| || ||||||||||||||| |||    
T  22144542 caccaacaacatctcatttctcaaccacaaaccatgaatcatgcaaacccaagccatgtattatcatcaacaacatggcttaacaacaacaacaacaatt 22144443  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||    
T  22144442 gatcatgaaacttatcacaattcatcaacaacaatgcatacttcaccaattgag 22144389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 201
Target Start/End: Complemental strand, 16182209 - 16182065
Alignment:
Q  58 caacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 156  Q
    ||||| |||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||  | ||||||||| |||||||||||| |||||||||    
T  16182209 caacatctcatttctcaacaacaatccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaaaacaacaacaacaattgatcat 16182110  T
Q  157 gaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
     |||| ||||| ||||||||||| || ||||||||||||||||||    
T  16182109 taaacttatcacaattcatcaacgacaatgcataattcaccaatt 16182065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 53771022 - 53771181
Alignment:
Q  57 acaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 154  Q
    ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||    
T  53771022 acaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatc 53771121  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  53771122 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 53771181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 23492346 - 23492513
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |    
T  23492346 aaaccaacaacaacaacttatttcacaacaacaaactatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 23492445  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
     |||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||| |||||||||    
T  23492446 tattgatcatgaaacatatcacaattcatcaacaaccatccataattcaccatttgagcataatttac 23492513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 16261463 - 16261593
Alignment:
Q  84 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 183  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  16261463 atgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatgaaacatatcacaattcatcaacaacc 16261562  T
Q  184 atgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||| |||||||||    
T  16261563 atgcataattcaccaattgagcataatttac 16261593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 80 - 204
Target Start/End: Complemental strand, 12349970 - 12349847
Alignment:
Q  80 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||    
T  12349970 aatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaac 12349872  T
Q  180 aaccatgcataattcaccaattgag 204  Q
     || |||||||||||||||||||||    
T  12349871 tacgatgcataattcaccaattgag 12349847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 13817492 - 13817642
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||||   |||||||| |||    
T  13817492 caccaacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaca---acaacaacaatt 13817588  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||    
T  13817589 gatcatgaaacttatcacaattcaccaacaacaatgcataattcaccaattgag 13817642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 2844172 - 2844331
Alignment:
Q  57 acaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 154  Q
    ||||||||| | ||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||    
T  2844172 acaacaacttacttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatc 2844271  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  2844272 atgaaacttatcacaattcatcaagaaccatgcataattcaccaattgagcataatttac 2844331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 35123674 - 35123826
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||  | |||||  | ||||||||||| | ||||    
T  35123674 caccaacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 35123773  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| ||||||  |||||| | |||||||||||||||||||    
T  35123774 atcatgaaacttatcacaattcaataacaacaaagcataattcaccaattgag 35123826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 6154600 - 6154448
Alignment:
Q  52 caccgacaacaactcatttctcaaca-acaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||| | | | ||| ||||||||||||| |||||||||||||||||||||||  | |||||| ||||| ||||||||| |||    
T  6154600 caccaacaacatctcatttctccatacaaaattatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaataacaacaacaatt 6154502  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||    
T  6154501 gatcatgaaacttatcacaattcatcaataacaatgcataattcaccaattgag 6154448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 14298399 - 14298551
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  |  || ||||||| | ||||    
T  14298399 caccaacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattg 14298498  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| |||||  ||||||| | |||||||||||||||||||    
T  14298499 atcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgag 14298551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 14304026 - 14304178
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  |  || ||||||| | ||||    
T  14304026 caccaacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatattaataacaacatcaattg 14304125  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| |||||  ||||||| | |||||||||||||||||||    
T  14304126 atcatgaaacttatcacaattcgacaacaacaaagcataattcaccaattgag 14304178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 53898719 - 53898572
Alignment:
Q  57 acaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 156  Q
    |||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||||||| |||  | |||||  | |||||||||||   |||||||||    
T  53898719 acaacatctcatttctcaacataaatcatgaatcttgcaaacccaagccatgaattatcaccaacaacatgacatatcaacaacaacattaattgatcat 53898620  T
Q  157 gaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| ||||| ||| || ||||||| |||||||||||||||||||||    
T  53898619 gaaacttatcacaatgcaacaacaacaatgcataattcaccaattgag 53898572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 17523176 - 17523006
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaa-acatatgactaaa 133  Q
    ||||||||| || ||| |||| |||||| ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||| | |  ||||| |     
T  17523176 acccattttcaccaaaacaccaacaacatctcatttctcaacacaaatcataaatcatgcaaacccaagccatgaattatcatcaacaaaattgacttag 17523077  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| | |||| ||||||||| ||||| |||||||||| |||   |||||||||||||||||||    
T  17523076 caacaacaacatcaattggtcatgaaacttatcacaattcatcaataacatagcataattcaccaattgag 17523006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 38167896 - 38168054
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | ||||||||    
T  38167896 acaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattgatca 38167995  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||| ||| | ||||||||||||||   ||||||||||||||||||| |||||||||    
T  38167996 tgaaacttattacaattcatcaacaacatagcataattcaccaattgagcataatttac 38168054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 6147015 - 6146863
Alignment:
Q  52 caccgacaacaactcatttctcaaca-acaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||| | | | |||||||||||||| |||||||||||||||||||| |||||  | |||||| |||||||||| |||| |||    
T  6147015 caccaacaacatctcatttctccatacaaaatcatgaatcatg-aaacccaagccatgaattattatcaacaacatgacttaacaacaacagcaacaatt 6146917  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    || |||||||| ||||| |||||||||||||| |||||| ||||||||||||||    
T  6146916 gaccatgaaacttatcacaattcatcaacaacaatgcatgattcaccaattgag 6146863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 47785064 - 47784924
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaag 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| |||| |||||||||| ||| | |||||||    
T  47785064 acatcatcaaaatcaaacttcttcattatcaacccattttacagaatcaccaacaacaactcatttctcaccaacaaatcatgaattatgaacacccaag 47784965  T
Q  104 ccatgaattatcatcaaacatatgactaaacaacaacaaca 144  Q
    |||||||| || | |||  | || ||| |||||||||||||    
T  47784964 ccatgaatcattaacaacaacatcacttaacaacaacaaca 47784924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 14295415 - 14295569
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | || ||| |  |||||||||| | |||    
T  14295415 caccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatcacttagaaacaacaacatcaatt 14295514  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 204  Q
    ||||||||| | ||||| |||||| |||||||   ||||||||| ||||||||||    
T  14295515 gatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 14295569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 17100636 - 17100783
Alignment:
Q  58 caacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 156  Q
    |||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||| |||| | |||||||||    
T  17100636 caacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattgatcat 17100735  T
Q  157 gaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| ||||| ||||||||||||||   |||||||||||||||||||    
T  17100736 gaaacttatcacaattcatcaacaacatagcataattcaccaattgag 17100783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 204
Target Start/End: Original strand, 17101321 - 17101468
Alignment:
Q  58 caacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 156  Q
    |||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||| |||| | |||||||||    
T  17101321 caacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaataacatcaattgatcat 17101420  T
Q  157 gaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| ||||| ||||||||||||||   |||||||||||||||||||    
T  17101421 gaaacttatcacaattcatcaacaacatagcataattcaccaattgag 17101468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 11329235 - 11329081
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||| ||| |||||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||  | || ||| | ||||||||||| |    
T  11329235 aaactaccaacaacatctcatttctcatcaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaacaacatc 11329136  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
     |||||||||||| | ||||| |||||| |||||||   |||||||||| |||||    
T  11329135 aattgatcatgaatcttatcacaattcaacaacaacatagcataattcaacaatt 11329081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 17139474 - 17139616
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| |||| ||| |||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||| | ||||||    
T  17139474 ttttaccaaactaccaacaacatctcatttcgcaacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacttagcaacaa 17139573  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    ||||| | |||||||||||| | ||||| |||||| |||||||    
T  17139574 caacatcaattgatcatgaatcttatcacaattcaacaacaac 17139616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 14528286 - 14528151
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||| || ||||||||||||||||| ||||||  | || ||| | ||||||||||| |    
T  14528286 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcattcatacccaagccatgaattaccatcaacaacatcacttagcaacaacaacatc 14528187  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaac 182  Q
     |||||||||||| | ||||| |||||| |||||||    
T  14528186 aattgatcatgaatcttatcacaattcaacaacaac 14528151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 86
Target Start/End: Complemental strand, 9303425 - 9303343
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaatcatg 86  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  9303425 acatcatcaaaatcaaacttcttctttatcaacccgttttacaaaaccaccaacaacaactcattttctcaacaacaatcatg 9303343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 28558188 - 28558282
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa-caacaaccat 149  Q
    ||||||| | ||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  28558188 acaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaatcaacaaccat 28558282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 195
Target Start/End: Complemental strand, 12560510 - 12560362
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||| ||| |||||| |||||||||||||| ||| |||||||||||||| |||||||||| |||||| |||| |  | || ||| | ||||||||||| |    
T  12560510 aaactaccaacaacatctcatttctcaacatcaaatcatgaatcatgcatacccaagccaggaattaacatccacaacatcacttagcaacaacaacatc 12560411  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 195  Q
    ||||||||||||| ||||||| |||||| |||||||   ||||||||||    
T  12560410 cattgatcatgaatcatatcacaattcaacaacaacatagcataattca 12560362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 54423986 - 54424142
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 147  Q
    |||||| | ||||||||| ||||||||  |  |||||||||||||||| ||||||||||||||| |||||| |  |  | ||| | ||| ||||||| |     
T  54423986 aaaccaacaacaacaacttatttctcataacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacgtcacttagcaataacaacatca 54424085  T
Q  148 attgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||||| ||||| ||||||||||||||   |||||||||||||||||||    
T  54424086 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 54424142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 19261104 - 19260956
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| |||||  |||||||| | |||||||||||| ||||||||||||||||| |||  |  | || | | ||||||||||||| | ||||||||    
T  19261104 acaacaacttatttcataacaacaaattatgaatcatgcatacccaagccatgaattaacattcataacatcatttaacaacaacaacatctattgatca 19261005  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||| ||||| ||||||||||||||   | |||||||||||||||||    
T  19261004 tgaaacttatcacaattcatcaacaacttagtataattcaccaattgag 19260956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 55441123 - 55440996
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| ||||||||||||||| || |||||||| ||||| ||||||| ||||||||||||||||  | || ||| | || |||||||| |    
T  55441123 aaaccaccaacaacatctcatttctcaacaaaaaatcatgaattatgcatacccaagtcatgaattatcatcaacaacatcacttagcatcaacaacatc 55441024  T
Q  147 cattgatcatgaaacatatcaaaattca 174  Q
     |||||||||||||| ||||| ||||||    
T  55441023 aattgatcatgaaacttatcacaattca 55440996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 14301042 - 14301196
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| ||||||||||||||||||  ||||||||||||||||| ||| ||||||| ||||||||  | || ||| |  |||||||||| | |||    
T  14301042 caccaacaacatctcatttctcaacaacaaaacatgaatcatgcaaaccaaagacatgaataatcatcaacaacatcacttagaaacaacaacatcaatt 14301141  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 204  Q
    ||||||||| | ||||| |||||| |||||||   ||||||||| ||||||||||    
T  14301142 gatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 14301196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 12349809 - 12349656
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacc-----caagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    ||||||||| |||||||| || ||| | ||||||||||||||||     |||||||||| |||||||| |  | |||||  | ||||||||||| | |||    
T  12349809 acaacaacttatttctcatcatcaaattatgaatcatgcaaaccatggccaagccatgatttatcatctacaacatgacatatcaacaacaacatcaatt 12349710  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||| ||||||| | |||||||||||||||||||    
T  12349709 gatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 12349656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 182
Target Start/End: Complemental strand, 12489017 - 12488865
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    ||||||||||||| || |||||| | ||||||||| ||||| || ||  || |||||||| ||| | ||||||||||||||||||||||||  | || ||    
T  12489017 atcaacccattttcaccaaaccaacaacaacaacttatttcccatcattaaatcatgaattatgaacacccaagccatgaattatcatcaacaacatcac 12488918  T
Q  130 taaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    | | ||||||||||| | |||||||||||| | ||||| |||||| |||||||    
T  12488917 ttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaac 12488865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 14059478 - 14059414
Alignment:
Q  57 acaacaactcatttctcaacaaca-atcatgaatcatgcaaacccaagccatgaattatcatcaa 120  Q
    |||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  14059478 acaacatctcatttctcatcaacagatcatgaattatgcaaacccaagccatgaattatcatcaa 14059414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 17204667 - 17204807
Alignment:
Q  42 tttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaac 140  Q
    |||||||||||||  |||||||||||||||||| |||| |||||||||| ||  | ||||||||||||||| |||| |||  |||| ||| | |||||||    
T  17204667 tttacaaaaccactaacaacaactcatttctcatcaacaaatcatgaattataaacacccaagccatgaatcatcaacaacaatattacttagcaacaac 17204766  T
Q  141 aacaaccattgatcatgaaacatatcaaaattcatcaacaa 181  Q
    |||| ||||| | |||||  | ||||| |||||| ||||||    
T  17204767 aacatccattaaacatgattcctatcacaattcaacaacaa 17204807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 159
Target Start/End: Complemental strand, 38811297 - 38811170
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    |||||||||||||||||  |||| |||||||||||||||| | || |||  ||||||| ||||| ||||||||||||||| ||||||||  | || |||     
T  38811297 tcaacccattttacaaagtcaccaacaacaactcatttctgatcatcaaaacatgaattatgcacacccaagccatgaatcatcatcaacaacatcactt 38811198  T
Q  132 aacaacaacaacaaccattgatcatgaa 159  Q
    | ||||||||||| | ||||| ||||||    
T  38811197 agcaacaacaacatcaattgaacatgaa 38811170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 1990759 - 1990873
Alignment:
Q  32 atcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgca-aacccaagccatgaattatcatcaaacatatgac 129  Q
    |||||||||||||||||||||||| |||||||||||||||||| || | |||||||| | ||| | || ||||||||||||| |||| |||  ||||  |    
T  1990759 atcaacccattttacaaaaccaccaacaacaactcatttctcatcatcaaatcatgatttatgaacaaaccaagccatgaatcatcaacaacaatatctc 1990858  T
Q  130 taaacaacaacaaca 144  Q
    | |||||||||||||    
T  1990859 ttaacaacaacaaca 1990873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 17960602 - 17960520
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattat 114  Q
    |||||||||||||||||  |||| ||||||||||||||| || |||| |||||||||| ||||| ||||||| ||||||||||    
T  17960602 tcaacccattttacaaagtcaccaacaacaactcatttcccatcaacaaatcatgaattatgcacacccaagtcatgaattat 17960520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 34439513 - 34439451
Alignment:
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataattta 213  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||| ||||    
T  34439513 gatcatgaaacttatcataattcatcaacaacaatgcataattcaccaattgagcatatttta 34439451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 8631801 - 8631912
Alignment:
Q  85 tgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacca 184  Q
    ||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||||| | |||  | ||||||| ||||| ||| || ||||||| |    
T  8631801 tgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaatttgttatgaaacttatcacaatccaacaacaacaa 8631900  T
Q  185 tgcataattcac 196  Q
     |||||||||||    
T  8631901 agcataattcac 8631912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 9591035 - 9590918
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    ||||||||||||| | |||||||||||||||||| || | |||||||||  ||| | ||||||| ||||||| |||| |||  |||| ||| ||||||||    
T  9591035 ttttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgaactatgaacacccaagtcatgaatcatcaacaacaatatcacttaacaacaa 9590936  T
Q  140 caacaaccattgatcatg 157  Q
    ||||| | ||||| ||||    
T  9590935 caacatcaattgaacatg 9590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 12952915 - 12953034
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||| ||||||||| | |||||||||||||||||| || ||| |||||| | ||| | ||||||||||||||| |||| |||  ||    
T  12952915 tcataatcaacccatttttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaat 12953014  T
Q  125 atgactaaacaacaacaaca 144  Q
    ||  || | |||||||||||    
T  12953015 atctcttagcaacaacaaca 12953034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 201
Target Start/End: Original strand, 17938582 - 17938701
Alignment:
Q  82 tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaa 181  Q
    |||||||||||| ||||||||||||||||| || |||||  | |||||  | ||||||||||| | |||||||||||||   | || ||| || ||||||    
T  17938582 tcatgaatcatgtaaacccaagccatgaatgattatcaacaacatgacatatcaacaacaacatcaattgatcatgaaaataaccacaatccaacaacaa 17938681  T
Q  182 ccatgcataattcaccaatt 201  Q
    | | |||||||||| |||||    
T  17938682 caaagcataattcatcaatt 17938701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 15876034 - 15876176
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| |||| ||| ||| |||||||||||||| | |||| |||||||| ||| | ||| ||||||||||| ||||| ||  | || ||| | ||||||    
T  15876034 ttttaccaaactaccaacaccaactcatttctcatccacaaatcatgaattatgaatacctaagccatgaatcatcattaacaacatcacttaccaacaa 15876133  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    ||||| | ||||| |||||| | ||||| |||||| |||||||    
T  15876134 caacatcaattgaacatgaatcttatcacaattcaacaacaac 15876176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 3576703 - 3576615
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 144  Q
    |||||||||||||||||| |||||| |||||||| ||| | ||||||||||||||| |||| | |  |||| ||| | |||||||||||    
T  3576703 acaacaactcatttctcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaaccacaatattacttagcaacaacaaca 3576615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 182
Target Start/End: Original strand, 16880131 - 16880231
Alignment:
Q  82 tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaa 181  Q
    |||||||| ||||| |||||||||||||||||||||| |  | || ||| | |||||| |||| | ||||| |||||| | ||||| |||||| ||||||    
T  16880131 tcatgaattatgcacacccaagccatgaattatcatccacaacatcacttagcaacaataacatcaattgaacatgaatcttatcacaattcaacaacaa 16880230  T
Q  182 c 182  Q
    |    
T  16880231 c 16880231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 28558271 - 28558311
Alignment:
Q  174 atcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  28558271 atcaacaaccatgcataattcaccaattgagcatcatttac 28558311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 34559857 - 34559969
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | ||||||||||| |||||| || | ||| |||| | ||| | || |||||||||||| |||| |||  |||| |||     
T  34559857 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaattatgatttatgaacactcaagccatgaatcatcaacaacaatatcactt 34559956  T
Q  132 aacaacaacaaca 144  Q
    | |||||||||||    
T  34559957 agcaacaacaaca 34559969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 17191511 - 17191583
Alignment:
Q  42 tttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    ||||||||||||||   |||||||||||||||| |||| |||||||||| ||| | || |||||||||||| ||||    
T  17191511 tttacaaaaccacc---aacaactcatttctcatcaacaaatcatgaattatgaacactcaagccatgaatcatca 17191583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 4e-74; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 11583982 - 11584184
Alignment:
Q  6 catcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaa-cccaagc 104  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11583982 catcatcaaaaacaaacttcttcatcatcaacccattttacaaaaccacgaacaacaactcatttctcaacaacaatcatgaatcatgcaaaacccaagc 11584081  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat---gcataattcaccaatt 201  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |    ||||||||||||||||    
T  11584082 catgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcaacaacaacaacaaagcataattcaccaatt 11584181  T
Q  202 gag 204  Q
    |||    
T  11584182 gag 11584184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 2031783 - 2031950
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  2031783 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaacaacaac 2031882  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  2031883 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 2031950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 11342635 - 11342825
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||| || ||  |||| |||||||  |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  11342635 tcataatcaacccattttcaccaagacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 11342734  T
Q  125 atgactaaacaa-caacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  11342735 atgactaaacaaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 11342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 27 - 204
Target Start/End: Complemental strand, 1168500 - 1168321
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||| |  ||| |||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |     
T  1168500 tcataatcaacccattttcatcaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaac 1168401  T
Q  125 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||| | ||||||||||| | |||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||    
T  1168400 atgacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacattgcataattcaccaattgag 1168321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 28261498 - 28261651
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | | |||| |||||||||||||||||||||||||||||   | |||||||||||||||||||||| |||    
T  28261498 caccaacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcagcaacatgactaaacaacaacaacaacaatt 28261597  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||| |||||||||| |||| ||||||||| |||||||||||||||||||||    
T  28261598 gatcataaaacatatcacaatttatcaacaacaatgcataattcaccaattgag 28261651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 21204898 - 21205066
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||||| | ||||||||| ||||| |||||||||  | |||||||||||| |||||||||||||||||  || ||  | || ||| ||||||||||||||    
T  21204898 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagaataaataacatcacttaacaacaacaacaa 21204997  T
Q  146 ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
      |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  21204998 atattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 21205066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 21397073 - 21397222
Alignment:
Q  59 aacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa---caacaaccattgatc 154  Q
    |||| |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||   ||||||| |||||||    
T  21397073 aacatctcatttctcaataacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaataacaacaacaattgatc 21397172  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  21397173 atgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 21397222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 52 - 203
Target Start/End: Complemental strand, 21647009 - 21646857
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacat-atgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||||||||||| | |  ||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| ||    
T  21647009 caccaacaacatctcatttctcaacaacaaaccaataattatacaaacccaagccatgaattatcatcaa-catcatgactaaacaacaacagcaacaat 21646911  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 203  Q
    |||||||||||||||||| |||||||||||||| || |||||||||||||||||    
T  21646910 tgatcatgaaacatatcacaattcatcaacaacgatacataattcaccaattga 21646857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 11337455 - 11337303
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||  | |||||| | ||||||||||| | ||||    
T  11337455 caccaacaacatctcatttctcaacaacaatcatgaatcatgtaaactcaagccatgaattatcatcaacgacatgacttagcaacaacaacatcaattg 11337356  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| ||||||||||||||    ||||||||||||| ||||    
T  11337355 atcatgaaacttatcacaattcatcaacaacataacataattcaccaaatgag 11337303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 24475560 - 24475708
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||   |||    
T  24475560 caccaacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaaca---att 24475656  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||  | |||||||||||||| |||||||||||||||||||||    
T  24475657 gatcatgaaacata--acaattcatcaacaacaatgcataattcaccaattgag 24475708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 4865239 - 4865393
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaa-ttatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| ||||| ||||||||||||| || |||| |||||||||||||||||||| ||||||||||  | |||| |||||||| | |||||| ||    
T  4865239 caccaacaacacctcatctctcaacaacaattcaagaattatgcaaacccaagccatgaaattatcatcaacaacatgaataaacaaccataacaacaat 4865338  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||||||||| ||||||||||| || |||||||||||||||||||||    
T  4865339 tgatcatgaaacatatcacaattcatcaaccacaatgcataattcaccaattgag 4865393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 20712036 - 20712206
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| ||||||  | |||||| ||    
T  20712036 acccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatcaacaacatgacttaa 20712135  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| | |||||||||| ||| ||||| |||||||||||||| | |||||||||||||||||||    
T  20712136 caacaacaacatcaattgatcatgcaacttatcacaattcatcaacaacaaagcataattcaccaattgag 20712206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 21650668 - 21650835
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| | ||||||| | |||||||||||| |||||| |||||||||| |||  |  | || ||| ||||||||||||| |    
T  21650668 aaaccaacaacaacaacttatttcaccacaacaaattatgaatcatgcatacccaaaccatgaattagcattcataacatcacttaacaacaacaacatc 21650767  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
     |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  21650768 tattgatcatgaaacttatcacaattcaacaacaaccatgcataattcaccaattgagcataatttac 21650835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 16105573 - 16105656
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaatcatga 87  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  16105573 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 16105656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 21906729 - 21906846
Alignment:
Q  83 catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||| |||||||||| ||   |||||||||||||| ||||| ||||||||||||||    
T  21906729 catgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacatca---attgatcatgaaacttatcacaattcatcaacaac 21906825  T
Q  183 catgcataattcaccaattga 203  Q
       |||||||||| |||||||    
T  21906826 atagcataattcatcaattga 21906846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 109158 - 109075
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaatcatga 87  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  109158 acatcatcaaaatcaaacttcttctctatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 109075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 80 - 204
Target Start/End: Complemental strand, 24183370 - 24183249
Alignment:
Q  80 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    |||||||||||||||||||||||||||| |||||||||||   | |||||  | |||||||| || | ||||||||||||||  |||| |||||| ||||    
T  24183370 aatcatgaatcatgcaaacccaagccattaattatcatca---acatgacatatcaacaacaccatcaattgatcatgaaactcatcacaattcaacaac 24183274  T
Q  180 aaccatgcataattcaccaattgag 204  Q
    ||| | |||||||||||||||||||    
T  24183273 aacaaagcataattcaccaattgag 24183249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 195
Target Start/End: Original strand, 19405503 - 19405658
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| ||| |||| |||||| |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||  | ||  ||    
T  19405503 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacataccagtaa 19405602  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 195  Q
    ||| | | |||||||||||||| ||||| |||||| ||||||| |  |||||||||    
T  19405603 caatatcaattgatcatgaaacttatcacaattcaacaacaacgaatcataattca 19405658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 33 - 201
Target Start/End: Original strand, 7728378 - 7728547
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    |||||||||||| ||||  |||| |||||| ||||| ||||| ||||||| ||||||| ||||| |||||||| || ||||||||||||  | || |||     
T  7728378 tcaacccatttttcaaagtcaccaacaacacctcatctctcaccaacaattcatgaattatgcacacccaagcgataaattatcatcaacaacatcactt 7728477  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    | ||||||||||| | ||||| |||||| | ||||| |||||| |||||||   |||||||||| |||||    
T  7728478 agcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaacaatt 7728547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 23466434 - 23466557
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat-atgactaaacaacaacaacaaccat 149  Q
    |||| ||||||  ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||| ||||| || ||| | ||||||||||| | ||    
T  23466434 caccaacaacatatcattcctcaacaacaaatcatgaatcatgcatacccaagccatgaactatcatc-aacatcatcacttagcaacaacaacatcaat 23466532  T
Q  150 tgatcatgaaacatatcaaaattca 174  Q
    |||||||||||| ||||| ||||||    
T  23466533 tgatcatgaaacttatcacaattca 23466557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 201
Target Start/End: Original strand, 3673818 - 3673989
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    ||||||||||||| || |||||| | ||||||||| |||||||| || ||| || ||| | ||| | ||||||||||||||| |||||||| ||  |  |    
T  3673818 atcaacccattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcgtgatttatgaacacccaagccatgaatcatcatcaaccacctcgc 3673917  T
Q  130 taaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    | | ||||||||||| | |||||||||||||| ||||| |||||| |||||||   |||||||||| |||||    
T  3673918 ttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacatagcataattcaacaatt 3673989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 21616974 - 21617124
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | |||||| |||| |||||| || ||| |||||||| ||| | ||||||||||||||| | || |||  |||| |||     
T  21616974 tcaacccattttacaaaaccaaccacaacagctcacttctcatcatcaaatcatgaattatgaacacccaagccatgaatcaacaacaacaatatcactt 21617073  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  21617074 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaac 21617124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 23493875 - 23494040
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    |||||| |||||| || |||||| | ||||||||| |||||||| || ||| |||||||| ||| | ||||||||||||||| ||||||||  | || ||    
T  23493875 atcaactcattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcac 23493974  T
Q  130 taaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 195  Q
    | | ||||||||||| | ||||| |||||| | ||||| |||||| |||||||   ||||||||||    
T  23493975 ttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattca 23494040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 16595474 - 16595550
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||| |||| ||| |||||| ||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||    
T  16595474 ttttaccaaactaccaacaacatctcatttctcatcaacaattcatgaatcatgcacacccaagtcatgaattatca 16595550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 32966436 - 32966352
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaa-caatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||||||  |||| |||||||||||||||||| ||| |||| |||||| |||||  | |||||||||||||||||    
T  32966436 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaaccaattatgaattatgcacgctcaagccatgaattatca 32966352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 201
Target Start/End: Original strand, 19862183 - 19862336
Alignment:
Q  49 aaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 147  Q
    ||||||| |||||||||||||||||| || ||| |||||||| ||| | ||||||| ||||||| |||| |||  |||| ||| | ||||||||||| |     
T  19862183 aaccaccaacaacaactcatttctcatcatcaaatcatgaattatgaacacccaagtcatgaatcatcaacaataatatcacttagcaacaacaacatca 19862282  T
Q  148 attgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||  |||||  | ||||| |||||| |||||||   |||||||||| |||||    
T  19862283 attgcacatgattcttatcacaattcaacaacaacatagcataattcaacaatt 19862336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 24225634 - 24225596
Alignment:
Q  6 catcatcaaattcaaacttcttcattatcaacccatttt 44  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  24225634 catcatcaaaatcaaacttcttcattatcaacccatttt 24225596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 6456580 - 6456694
Alignment:
Q  32 atcaacccattt-tacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    |||||||| ||| ||||||| || | ||||||||| |||||||| || ||| |||||| ||||| | ||||||||||||||| |||| |||  ||||  |    
T  6456580 atcaacccgtttgtacaaaaacaacaacaacaacttatttctcatcatcaaatcatgattcatgaacacccaagccatgaatcatcaacaacgatatctc 6456679  T
Q  130 taaacaacaacaaca 144  Q
    | |||||||||||||    
T  6456680 ttaacaacaacaaca 6456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 37983325 - 37983434
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    |||||||||||||||||||||   |||||||||||||| ||| || | |||| ||| | ||| | |||||||| |||||| |||| |||  |||| |||     
T  37983325 tcaacccattttacaaaacca---acaacaactcatttttcatcatcaaatcctgatttatgaacacccaagctatgaatcatcaacaacaatatcactt 37983421  T
Q  132 aacaacaacaaca 144  Q
    |||||||||||||    
T  37983422 aacaacaacaaca 37983434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 29917931 - 29918035
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    ||||||||||||| |||||| || | ||||||||||| ||| |||||| | ||| | ||||||||||||||| |||| |||  ||||  || | ||||||    
T  29917931 ttttacaaaaccaacgacaataatttatttctcaacatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttagcaacaa 29918030  T
Q  140 caaca 144  Q
    |||||    
T  29918031 caaca 29918035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 3e-69; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 18583264 - 18583457
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18583264 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 18583363  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||||                ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18583364 catgaattatcat----------------caacaacaacatcaattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 18583447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 35015447 - 35015272
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||  ||||||||||||||||    
T  35015447 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 35015348  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  35015347 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 35015272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 19983581 - 19983416
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| | ||||||||||||||||||||||||| || ||||||||  ||||||||||||||||    
T  19983581 atttcacaaaaccaccaacaacaatccatttctcaacaacaaaccatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacaaca 19983482  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| | | |||||||||||||| ||||||||||||| |||||||||||||| |||||||    
T  19983481 acaacaaccactaaccatgaaacatatcacaattcatcaacaatcatgcataattcactaattgag 19983416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 26089718 - 26089875
Alignment:
Q  57 acaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 156  Q
    ||||||||| ||||| |||||||||| |||||||||||| |||||| |||||||||| |||| |  | || ||| ||||||||||||| | |||||||||    
T  26089718 acaacaacttatttcacaacaacaattatgaatcatgcatacccaaaccatgaattagcatccataacatcacttaacaacaacaacatctattgatcat 26089817  T
Q  157 gaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  26089818 gaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 26089875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 203
Target Start/End: Complemental strand, 25744483 - 25744331
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||| ||||||| | | |||| ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||  ||    
T  25744483 caccaacaacatctcatttctctacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacattt 25744384  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 203  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| ||||    
T  25744383 gatcatgaaacatatcacaattcatcaacaacaatgcataattcaccacttga 25744331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 18823712 - 18823573
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| |||||||||||| ||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||    
T  18823712 acatcatcaaaatcaaacttcttctttatcaagccattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaatcatgcaaacccaagc 18823613  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaaca 144  Q
    |||| |||||||||||  | |||||  | |||||||||||    
T  18823612 catggattatcatcaacaacatgacatatcaacaacaaca 18823573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 18002777 - 18002611
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 147  Q
    |||||| | ||||||||| ||||| |||||||||  |||||||||||| ||||||||||||||||| |||| |  |  | ||| ||||||||||||| |     
T  18002777 aaaccaacaacaacaacttatttcacaacaacaagtatgaatcatgcatacccaagccatgaattagcatccataacgtcacttaacaacaacaacatct 18002678  T
Q  148 attgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||    
T  18002677 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcatcaattgagcataatttac 18002611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 32898779 - 32898920
Alignment:
Q  64 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 162  Q
    |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||  | |||||||||||||||||||  | ||||||||||||||     
T  32898779 ctcatttctcaacaacaaaccatgaatcatgcaaacccaagccattaattatcatcaacaacatgactaaacaacaacaacttcaattgatcatgaaact 32898878  T
Q  163 tatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| |||||||||||||  |||||||||||||||||||||    
T  32898879 tatcacaattcatcaacaataatgcataattcaccaattgag 32898920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 23994904 - 23995063
Alignment:
Q  57 acaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 154  Q
    ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||    
T  23994904 acaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatc 23995003  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  23995004 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 23995063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 18839567 - 18839428
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| |||||||||||| || ||||| |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||    
T  18839567 acatcatcaaaatcaaacttcttctttttcaactcattttacaaaaccaccaccaacaactcatttctccacaacaatcatgaatcatgcaaacccaagc 18839468  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaaca 144  Q
    |||| |||||||||||  | |||||  | |||||||||||    
T  18839467 catggattatcatcaacaacatgacatatcaacaacaaca 18839428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 22440911 - 22441064
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||| | |||||  ||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||| ||    
T  22440911 caccaacaacatctcatttctccataacaaaatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacaat 22441009  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||| ||||| || |||| |||||| |||||||||||||||||||||    
T  22441010 tgatcatgaaacttatcacaaatcatgaacaacaatgcataattcaccaattgag 22441064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 52 - 201
Target Start/End: Original strand, 31628245 - 31628395
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | |||    
T  31628245 caccaacaacatctcatttctccacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaatt 31628344  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||||||||| ||||| |||||| ||||||| | ||||||||||||||||    
T  31628345 gatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaatt 31628395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 15742505 - 15742339
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa- 145  Q
    |||||| | ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||||     
T  15742505 aaaccagcaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacaac 15742406  T
Q  146 --ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataat 210  Q
      | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  15742405 atctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataat 15742339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 48 - 203
Target Start/End: Original strand, 18777119 - 18777275
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||      
T  18777119 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatt 18777218  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 203  Q
    ||||||||||||||| ||||| ||||||||||||||   ||||||||||||||||||    
T  18777219 cattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattga 18777275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 13014979 - 13014826
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||| | |||||  ||| ||||||||||| ||||||||| |||||||||||||  | |||||| |||| || ||||||| ||    
T  13014979 caccaacaacatctcatttctccataacaaaatcaagaatcatgcaa-cccaagccacgaattatcatcaacaacatgacttaacatcagcaacaacaat 13014881  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| |||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  13014880 tgatcttgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 13014826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 4991002 - 4991085
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaatcatga 87  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  4991002 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatga 4991085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 58 - 201
Target Start/End: Original strand, 16086001 - 16086144
Alignment:
Q  58 caacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatg 157  Q
    ||||| |||||||||| |||  |||||||||||||||||||||||| ||||||||||||| ||  | |||||  | ||||||||||| | | ||||||||    
T  16086001 caacatctcatttctccacataaatcatgaatcatgcaaacccaagtcatgaattatcattaacaacatgacatatcaacaacaacatcaaatgatcatg 16086100  T
Q  158 aaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||| ||||| |||||| ||||||| | | ||||||||||||||    
T  16086101 aaacttatcataattcaacaacaacaaggtataattcaccaatt 16086144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 201
Target Start/End: Original strand, 18432626 - 18432770
Alignment:
Q  58 caacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 156  Q
    ||||| ||||||| ||||||| || | || ||||||||||||||||||||||||||||||||||  | || ||  | |||||||| || | |||||||||    
T  18432626 caacatctcatttttcaacaataaaccattaatcatgcaaacccaagccatgaattatcatcaacaacataacatatcaacaacatcatcaattgatcat 18432725  T
Q  157 gaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||| ||||| |||||| ||||||| | ||||||||||||||||    
T  18432726 gaaacttatcacaattcaacaacaacaaagcataattcaccaatt 18432770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 201
Target Start/End: Original strand, 18398890 - 18399065
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacata 125  Q
    |||| ||||||||||||| ||||||||| | |||||||||||||||| | ||  | |||||||| ||||| ||||||||||||||||||||||||  | |    
T  18398890 tcataatcaacccatttttacaaaaccaacaacaacaactcatttcttatcacaattcatgaattatgcacacccaagccatgaattatcatcaacaaca 18398989  T
Q  126 tgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    | ||| | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||   |||||||||| |||||    
T  18398990 tcacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaacaatt 18399065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 201
Target Start/End: Complemental strand, 18381965 - 18381803
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||||||||||||| |||||| |||||||| ||| | ||||||||||||||| |||| |||  | || ||| | |||||    
T  18381965 atttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 18381866  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||||| | ||||| |||||  | ||||| |||||| ||||||| | |||||||||| |||||    
T  18381865 acaacatcaattgaacatgactcttatcacaattcaacaacaacaaagcataattcaacaatt 18381803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 204
Target Start/End: Original strand, 18570271 - 18570409
Alignment:
Q  67 atttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatat 165  Q
    ||||| ||||||||| | |||||||||||| ||||| ||||||||||| |||| |  | || ||| ||||||||| ||  | |||||||||||||| |||    
T  18570271 atttcacaacaacaaattatgaatcatgcatacccaggccatgaattagcatccataacatcacttaacaacaactacttctattgatcatgaaacttat 18570370  T
Q  166 caaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    || ||||||||||||||   |||||||||||||||||||    
T  18570371 cacaattcatcaacaacatagcataattcaccaattgag 18570409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 17083496 - 17083383
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaa 102  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| || | |||||||||||||||| | || | |||||||| | ||| | ||||||    
T  17083496 acatcatcaaaatcaaacttcttcattatcaacccattttcacaaaaacaacaacaacaactcatttctaatcatcaaatcatgatttatgaacacccaa 17083397  T
Q  103 gccatgaattatca 116  Q
    ||||||||| ||||    
T  17083396 gccatgaatcatca 17083383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 22362054 - 22361885
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||| | | ||||||||||| |||||| || |||| ||||||| ||| | ||||||||||||||| |||| |||  |||| |||     
T  22362054 tcaacccattttacaaaactaacaacaacaactcaattctcatcatcaattcatgaattatgaacacccaagccatgaatcatcaacaacaatatcactt 22361955  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    | ||||||||||| | ||||| ||||||    |||| |||||| |||||||   |||||||||| |||||    
T  22361954 agcaacaacaacatcaattgaacatgaatttcatcacaattcaacaacaacatagcataattcatcaatt 22361885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 25367502 - 25367376
Alignment:
Q  57 acaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    |||||| ||||||||||| ||||||| ||||||||||||| |||||||||||||||||||   ||  | || ||| | ||||||||||| | ||||| ||    
T  25367502 acaacatctcatttctcatcaacaattcatgaatcatgcacacccaagccatgaattatcgataacaacatcacttagcaacaacaacatcaattgaaca 25367403  T
Q  156 tgaaacatatcaaaattcatcaacaac 182  Q
    |||| | ||||| |||||| |||||||    
T  25367402 tgaatcttatcacaattcaacaacaac 25367376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 52 - 201
Target Start/End: Original strand, 16106499 - 16106643
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||||||| |||  ||||||||||||||||||     | ||||||||||||| ||  | |||||  | ||||||||||| | | ||    
T  16106499 caccaacaacatctcatttctccacataaatcatgaatcatgcaaa-----gtcatgaattatcattaacaacatgacatatcaacaacaacatcaaatg 16106593  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||||||||| ||||| |||||| ||||||| | | ||||||||||||||    
T  16106594 atcatgaaacttatcacaattcaacaacaacaaggtataattcaccaatt 16106643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 156
Target Start/End: Complemental strand, 28195367 - 28195259
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||| ||| |||||| ||||||||||||||| || |||| ||| |||||||| |||||||||||||||||||||  | || ||| | ||||||| |||||    
T  28195367 aaactaccaacaacatctcatttctcaacaataaatcat-aattatgcaaactcaagccatgaattatcatcaacaacatcacttagcaacaaccacaac 28195269  T
Q  147 cattgatcat 156  Q
     |||||||||    
T  28195268 aattgatcat 28195259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 15740211 - 15740269
Alignment:
Q  57 acaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattat 114  Q
    |||||| ||||||||||| ||||||| ||||||||||||| |||||| |||||||||||    
T  15740211 acaacatctcatttctcatcaacaattcatgaatcatgcacacccaaaccatgaattat 15740269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 18629892 - 18629786
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    ||||||||||||| | ||||||||| |||||||| || ||| |||||| | ||| | |||||| |||||||| |||| |||  |||| ||| ||||||||    
T  18629892 ttttacaaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatcacttaacaacaa 18629793  T
Q  140 caacaac 146  Q
    |||||||    
T  18629792 caacaac 18629786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 182
Target Start/End: Original strand, 25651197 - 25651345
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| ||||||||| | ||||||||| | |||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| ||| |     
T  25651197 acccattttcacaaaaccaacaacaacaacttaattctcatcatccaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcacttag 25651296  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  25651297 caacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 25651345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 25919571 - 25919655
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    ||||| |||||||||||  |||| |||| ||||||||| ||| |||| |||||||||| ||| | ||||||||||||||| ||||    
T  25919571 tcaactcattttacaaagtcaccaacaataactcatttttcatcaacaaatcatgaattatgaatacccaagccatgaatcatca 25919655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 33324675 - 33324735
Alignment:
Q  57 acaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||||||| || |||| ||||||| ||| | ||||||||||||||| ||||    
T  33324675 acaacaactcatttctcatcaccaattcatgaattatgaatacccaagccatgaatcatca 33324735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 35136277 - 35136217
Alignment:
Q  57 acaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||||||| || |||| ||||||| ||| | ||||||||||||||| ||||    
T  35136277 acaacaactcatttctcatcaccaattcatgaattatgaatacccaagccatgaatcatca 35136217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1867 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 75 - 274
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||    
T  75 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaacaacaacaactcatttctcagcaacaatcatgaatcatgcaaacccaagc 174  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||||| | |||||||||||||||||||    
T  175 catgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 41507091 - 41506924
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  41507091 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaacaacaacaac 41506992  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  41506991 cattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 41506924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 24717152 - 24716977
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||||||||||||||| |||||||  ||||| |||||||||| | ||||||||||||||||||||||||| || ||||||||  ||||||||||||| ||    
T  24717152 attttacaaaaccaccaacaacaatccatttatcaacaacaaattatgaatcatgcaaacccaagccatgtatcatcatcaacaatatgactaaacatca 24717053  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  24717052 acaacaaccattgaacatgaaacaaatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 24716977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 67 - 214
Target Start/End: Original strand, 39115267 - 39115415
Alignment:
Q  67 atttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatat 165  Q
    |||||||||||| || | |||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39115267 atttctcaacaataaattatgaatcatgcatacacaagtcatgaattatcatcaaccatatgactaaacaacaacaacaaccattgatcatgaaacatat 39115366  T
Q  166 caaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||  ||||||||||||| ||||||||||||||||||||| |||||||||    
T  39115367 cacgattcatcaacaactatgcataattcaccaattgagcataatttac 39115415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 52 - 201
Target Start/End: Original strand, 41246635 - 41246785
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| ||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||    
T  41246635 caccaacaacatttcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaatt 41246734  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  41246735 gatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaatt 41246785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 19993324 - 19993171
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||||| | |||| |||||||||| |||||||||||||||||||  | |||||||||||||||||||||| |||    
T  19993324 caccaacaacatctcatttctcaacaacaatccaagaattatgcaaaccctagccatgaattatcatcaacaacatgactaaacaacaacaacaacaatt 19993225  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||| ||||||  ||||| |||||||||||||| |||||||||||||||||||||    
T  19993224 gatgatgaaatttatcacaattcatcaacaacaatgcataattcaccaattgag 19993171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 22235068 - 22234920
Alignment:
Q  57 acaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    |||||| |||| | ||||||||||| | | |||| |||||||||||| |||||||||||||||||  | |||||||||||||||||||||| ||||||||    
T  22235068 acaacatctcaatcctcaacaacaaaccaagaattatgcaaacccaatccatgaattatcatcaacaacatgactaaacaacaacaacaacaattgatca 22234969  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  22234968 tgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 22234920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 20573461 - 20573309
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | ||||    
T  20573461 caccaacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 20573362  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| |||||| ||||||| | | |||||||||||||||||    
T  20573361 atcatgaaacttatcacaattcaacaacaacaaaggataattcaccaattgag 20573309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 16039176 - 16038996
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||||| ||||| ||||||||| | |||||||||||| | ||||||||| ||||| |||| |  | || ||| ||    
T  16039176 acccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatatccaagccataaattagcatccataacatcacttaa 16039077  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||| | |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| |||||||||    
T  16039076 caacaacaacatctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataatttac 16038996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 37611675 - 37611798
Alignment:
Q  80 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    |||||||||| |||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||| | ||| |||||||||||    
T  37611675 aatcatgaattatgcaa-cccaagccatgaattatcatcaaccacatgacttaacaacaacaacaacaattgatcatgaaacttttcacaattcatcaac 37611773  T
Q  180 aaccatgcataattcaccaattgag 204  Q
    ||| | |||||||||||||||||||    
T  37611774 aacaaagcataattcaccaattgag 37611798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 274416 - 274583
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| ||||||||| | |||| ||||||| ||||||||||||||||| |||| |  | || ||| ||||| ||||||| |    
T  274416 aaaccaacaacaacaacttatttcacaacaacaaattatgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatc 274515  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
     |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  274516 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttac 274583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 641433 - 641266
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| ||||||||| | |||| ||||||| ||||||||||||||||| |||| |  | || ||| ||||| ||||||| |    
T  641433 aaaccaacaacaacaacttatttcacaacaacaaattatgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatc 641334  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
     |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  641333 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttac 641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 827239 - 827072
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| ||||||||| | |||| ||||||| ||||||||||||||||| |||| |  | || ||| ||||| ||||||| |    
T  827239 aaaccaacaacaacaacttatttcacaacaacaaattatgattcatgcatacccaagccatgaattagcatccataacatcacttaacaataacaacatc 827140  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
     |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  827139 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgaacataatttac 827072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 20481565 - 20481735
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| ||||||  | |||||| ||    
T  20481565 acccattttcaccaaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatcaacaacatgacttaa 20481664  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| | |||||||||| ||| ||||| |||||||||||||| | | |||||||||||||||||    
T  20481665 caacaacaacatcaattgatcatgcaacttatcacaattcatcaacaacaaagtataattcaccaattgag 20481735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 20648087 - 20647949
Alignment:
Q  64 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 162  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||  | |||||  | ||||||| ||| | ||||||||||||||     
T  20648087 ctcacttctccacaacaaatcatgaatcatgcaaacccaagccatggattaacatcaacaacatgacctagcaacaacgacatcaattgatcatgaaact 20647988  T
Q  163 tatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||| ||||||||||||||   ||||||||||||||||    
T  20647987 tatcacaattcatcaacaacatagcataattcaccaatt 20647949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 201
Target Start/End: Complemental strand, 20654163 - 20654025
Alignment:
Q  64 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 162  Q
    |||| ||||| ||||||| ||||||||||||||||||||||| |||||||| ||||||  | |||||  | ||||||| ||| | ||||||||||||||     
T  20654163 ctcacttctccacaacaaatcatgaatcatgcaaacccaagcaatgaattaacatcaacaacatgacctagcaacaacgacatcaattgatcatgaaact 20654064  T
Q  163 tatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||| ||||||||||||||   ||||||||||||||||    
T  20654063 tatcacaattcatcaacaacttagcataattcaccaatt 20654025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 39447046 - 39446892
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| |||| ||| |||||| |||||||||||||||||| |||| ||||||||| |||||||||||||||||| |||||  | || ||| | ||||||    
T  39447046 ttttaccaaactaccaacaacatctcatttctcaacaacaaatcat-aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaa 39446948  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 195  Q
    ||||| | |||||||||||| | ||||| |||||| |||||||   ||||||||||    
T  39446947 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattca 39446892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 20567268 - 20567200
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaa 120  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  20567268 caccaacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaa 20567200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 20567427 - 20567335
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 144  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | |||||||||||    
T  20567427 caccaacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaaca 20567335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 20573620 - 20573528
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 144  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | |||||||||||    
T  20573620 caccaacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaaca 20573528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 25122513 - 25122618
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||| | |||||  ||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||| | ||    
T  25122513 caccaacaacatctcatttctccataacaaaatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgactaaacaacaacaacatctat 25122611  T
Q  150 tgatcat 156  Q
    |||||||    
T  25122612 tgatcat 25122618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 33 - 195
Target Start/End: Original strand, 38533607 - 38533770
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    |||||||||||||||||  | || |||||| ||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||  | || ||      
T  38533607 tcaacccattttacaaagtctccaacaacatctcatttctcatcaacaaatcatgaattatgcacacccaagccatgaattatcatcaacaacatcacct 38533706  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 195  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||   ||||||||||    
T  38533707 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattca 38533770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 137
Target Start/End: Original strand, 29759893 - 29760005
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||  || ||| |||| |||||||  |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  29759893 tcataatcaacccatttacaccaaaacaccaacaacaaaccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 29759992  T
Q  125 atgactaaacaac 137  Q
    |||||||||||||    
T  29759993 atgactaaacaac 29760005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 5854572 - 5854722
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | ||||||||||| |||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  5854572 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 5854671  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  5854672 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaac 5854722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 193
Target Start/End: Original strand, 21680984 - 21681121
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    |||||| || ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||  | ||  ||||||| | ||||||||    
T  21680984 acaacatcttatttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacataccagtaacaacatcaattgatca 21681083  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataatt 193  Q
    ||||||  |||| |||||| ||||||| | ||||||||    
T  21681084 tgaaactaatcacaattcaacaacaacaaagcataatt 21681121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 22736127 - 22736046
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaatta 113  Q
    |||||||||||||||||  |||| |||||||||||||| ||| |||||| |||||||| ||||| |||||||||||||||||    
T  22736127 tcaacccattttacaaagtcaccaacaacaactcatttttcatcaacaattcatgaattatgcacacccaagccatgaatta 22736046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 23837163 - 23837325
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| |||||||||||  ||||||||||||||||| |||| |||||||||| ||| | ||||||||||||||| |||| |||  | || ||| | |||||    
T  23837163 atttcacaaaaccaccaccaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaacaacaacatcacttagcaaca 23837262  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||||| | ||||| |||||  | || || |||||| |||||||   |||||||||| |||||    
T  23837263 acaacatcaattgaacatgactcttaccacaattcaacaacaacatagcataattcaacaatt 23837325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 15969796 - 15969860
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||| |||||||||||||||||  | |||||||||||| ||||| ||||||||||||||||||||    
T  15969796 caccaacaacaactcatttctcctctacaatcatgaattatgcacacccaagccatgaattatca 15969860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 24385988 - 24385867
Alignment:
Q  84 atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaacc 183  Q
    |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | ||||||||| | |         |||||||||||||     
T  24385988 atgaatcatgcatacccaagccatgaattagcatccataaaatcacttaacaacaacaacatctattgatcattaca---------attcatcaacaaca 24385898  T
Q  184 atgcataattcaccaattgagtataatttac 214  Q
    |||| |||||||||||||||| |||||||||    
T  24385897 atgcttaattcaccaattgagcataatttac 24385867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 26011452 - 26011602
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | ||||||||| | |||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  26011452 tcaacccattttacaaaaccaacaacaacaacttaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 26011551  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    | ||||||||||| | ||| | |||||| |  |||| |||||| |||||||    
T  26011552 agcaacaacaacatcaattcaacatgaatctcatcacaattcaacaacaac 26011602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 21198434 - 21198362
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaat 111  Q
    ||||||| |||||||| |||||||||||||||||| | || |||||||||| ||| | |||||||||||||||    
T  21198434 attttaccaaaccaccaacaacaactcatttctcatccacaaatcatgaattatgaacacccaagccatgaat 21198362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 182
Target Start/End: Original strand, 33528383 - 33528533
Alignment:
Q  32 atcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgact 130  Q
    ||||||||||||||||||| || | |||||||| ||||||||| || | |||||||| | ||| | ||||||||||||||| |||| |||| ||||  ||    
T  33528383 atcaacccattttacaaaatcaacaacaacaacccatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaaa-atatctct 33528481  T
Q  131 aaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
     | ||||||||||| | ||| | |||||| |  |||| |||||| |||||||    
T  33528482 tagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaac 33528533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 15933256 - 15933406
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | ||||||||||| |||||| |  | |||||||| | |   | ||||||||||||||| |||| |||  |||| |||     
T  15933256 tcaacccattttacaaaaccaacaacaacaactcaattctcatcttcaaatcatgatttacaaacacccaagccatgaatcatcaacaacaatatcactt 15933355  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  15933356 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 15933406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 201
Target Start/End: Complemental strand, 20561804 - 20561751
Alignment:
Q  148 attgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||||||||||||| ||||| ||||||||||||||   ||||||||||||||||    
T  20561804 attgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaatt 20561751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 23226368 - 23226240
Alignment:
Q  32 atcaacccattt--tacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatga 128  Q
    ||||||||||||  |||||||||| | |||||||  |||||||||  | ||| |||||||| ||| | ||||||||||||||| |||| |||  |||| |    
T  23226368 atcaacccatttcttacaaaaccaacaacaacaatccatttctcataatcaaatcatgaattatgaatacccaagccatgaatcatcaacaacaatatca 23226269  T
Q  129 ctaaacaacaacaacaaccattgatcatg 157  Q
    || ||||||||||||| | ||||| ||||    
T  23226268 cttaacaacaacaacatcaattgaacatg 23226240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 158
Target Start/End: Original strand, 23149736 - 23149865
Alignment:
Q  32 atcaacccattt--tacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatga 128  Q
    ||||||||||||  |||||||||| | |||||||||||||| ||| || | |||||||||| ||| | || |||||||||||| |||| |||  | || |    
T  23149736 atcaacccatttcttacaaaaccaacaacaacaactcatttttcatcatcaaatcatgaattatgaatactcaagccatgaatcatcaacaacaacatca 23149835  T
Q  129 ctaaacaacaacaacaaccattgatcatga 158  Q
    || | |||||| |||||| ||||| |||||    
T  23149836 cttagcaacaaaaacaactattgaacatga 23149865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 24929087 - 24929018
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatga 109  Q
    |||| ||||||||||| |||||||  |||||||||||||| |||||||||| ||||| |||||||| ||||    
T  24929087 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaat-atgcatacccaagcaatga 24929018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 157
Target Start/End: Complemental strand, 31194606 - 31194488
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    ||||||||||  |||| |||||||||||||| ||| |||| ||||||||||||||   |||||||| |||||| |||| |||  |||| | | | |||||    
T  31194606 attttacaaagtcaccaacaacaactcatttttcaccaacaaatcatgaatcatgtgcacccaagctatgaatcatcaacaacaatatcatttagcaaca 31194507  T
Q  139 acaacaaccattgatcatg 157  Q
    |||||| | ||||| ||||    
T  31194506 acaacatcaattgaacatg 31194488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 17285232 - 17285309
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 116  Q
    ||||| |||||| ||| |||||||||||||||||| |  ||| |||||||| ||| | ||||||||||||||| ||||    
T  17285232 attttgcaaaactaccaacaacaactcatttctcatcctcaagtcatgaattatgaatacccaagccatgaatcatca 17285309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 22742717 - 22742833
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    ||||||||||||| ||||||||| | ||||||||| |||||||| |||||| | | || | ||| | |||||||||| |||| |||| |||  ||||  |    
T  22742717 atcaacccatttttacaaaaccaacaacaacaacttatttctcatcaacaaaccaagatttatgaacacccaagccacgaatcatcaacaacaatattcc 22742816  T
Q  130 taaacaacaacaacaac 146  Q
    | |||||||||||||||    
T  22742817 tcaacaacaacaacaac 22742833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 27233348 - 27233244
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    ||||||||||||| | ||||||||| ||||||||  | | |||||||| | ||| | ||||||||||||||| |||| |||  ||||  || ||||||||    
T  27233348 ttttacaaaaccaacaacaacaacttatttctcattatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaa 27233249  T
Q  140 caaca 144  Q
    |||||    
T  27233248 caaca 27233244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 182
Target Start/End: Original strand, 3230 - 3407
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3230 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 3329  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    ||||||||||||||||  | |||||  | ||||||||||| | |||||||||||||| ||||| ||||||||||||||    
T  3330 catgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaac 3407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 21442 - 21642
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaag 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  21442 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttcttaacaacaattcatgaatcatgcaaacccaag 21541  T
Q  104 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 203  Q
    |||||||||||||||||  | |||||| | ||||||||||| | | | |||||||||| ||||| ||||||||||||||   ||||||||||||||||||    
T  21542 ccatgaattatcatcaacaacatgacttagcaacaacaacatcaaataatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattga 21641  T
Q  204 g 204  Q
    |    
T  21642 g 21642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 31141 - 31341
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaag 103  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31141 acatcatcaaaatcaaactttttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaattcatgaatcatgcaaacccaag 31240  T
Q  104 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 203  Q
    |||||||||||||||||  | |||||| | |||||| |||| | |||||| ||||||| ||||| ||||||||||||||   | |||||| |||||||||    
T  31241 ccatgaattatcatcaacaacatgacttagcaacaaaaacatcaattgataatgaaacttatcacaattcatcaacaacatagtataatttaccaattga 31340  T
Q  204 g 204  Q
    |    
T  31341 g 31341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 24890 - 25088
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  24890 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgc-aacccaagc 24988  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||||  | ||| |  | ||||||||||||| ||||||| |||||| ||||| |||||| ||||||| |  ||||||||||||||||||    
T  24989 catgaattatcatcaacaacatgccatatcaacaacaacaacaattgatcgtgaaacttatcacaattcaacaacaacaaaacataattcaccaattgag 25088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 25212 - 25341
Alignment:
Q  74 aacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattc 173  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  | ||| |  | ||||||||||||| ||||||| |||||| ||||| |||||    
T  25212 aacaacaatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgccatatcaacaacaacaacaattgatcgtgaaacttatcacaattc 25310  T
Q  174 atcaacaaccatgcataattcaccaattgag 204  Q
    | ||||||| |  ||||||||||||||||||    
T  25311 aacaacaacaaaacataattcaccaattgag 25341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 2e-63; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 111550 - 111384
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 147  Q
    |||||| | ||||||| | |||||||||||||||   ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  111550 aaaccaacaacaacaatttatttctcaacaacaaatttgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaacc 111451  T
Q  148 attgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  111450 attgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 111384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 126366 - 126555
Alignment:
Q  27 tcattatcaacccatttta-caaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| |||||||||||||  | ||| |||| |||||||  |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||   |    
T  126366 tcataatcaacccattttctccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacagt 126465  T
Q  125 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  126466 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 126555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 32494341 - 32494161
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||| | ||||||||||||||| | |||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  32494341 acccattttcaccaaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacacaagccatgaattatcatcaatcatatgactaaa 32494242  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  32494241 caacaacaacaaccattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 32494161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 7284376 - 7284180
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||| ||||| |||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  7284376 acatcgtcaaaatcaaacttctccattatcaacccatttaacaaaaccaccaacaacaactcatttctcaacaacaatcatgaatcatgcaaactcaagc 7284277  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||||||||| |||||  | |||||  | ||||||||||| | |||||||||||||| ||||| |||||| ||||||| | | ||||||||||||||    
T  7284276 catgaattattatcaacaacatgacatatcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaaggataattcaccaatt 7284180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 39046893 - 39046740
Alignment:
Q  52 caccgacaacaactcatttctcaacaaca-atcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |||    
T  39046893 caccaacaacatctcatttctcaacaacagatcaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaatt 39046794  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  39046793 gatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 39046740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 11287390 - 11287547
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  11287390 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 11287489  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
     | |||||||||||| ||||| ||||||||||||||   |||||||||||||||||||    
T  11287490 aactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 11287547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 211
Target Start/End: Complemental strand, 42056563 - 42056407
Alignment:
Q  57 acaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 154  Q
    ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  |||| ||| ||||||||||||| | |||||||    
T  42056563 acaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataatatcacttaacaacaacaacatctattgatc 42056464  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatt 211  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  42056463 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatt 42056407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 35094794 - 35094946
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||  | ||||||||||||||||| ||| ||||    
T  35094794 caccaacaacatctcatttctcaacaacaaatcaagaattatgcaaacccaagccatgatttatcatcaacaacatgactaaacaacaacagcaa-catt 35094892  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||| | | ||||||||||||||  ||||||||||||||||||||    
T  35094893 gatcatgaaacatttaacaattcatcaacaacagtgcataattcaccaattgag 35094946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 2190460 - 2190301
Alignment:
Q  57 acaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 154  Q
    ||||||||| | ||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||| ||||| | |||||||    
T  2190460 acaacaacttacttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacatcaacatctattgatc 2190361  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  2190360 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 2190301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 12758965 - 12759117
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||||||| |||  |||||| |||| ||||||||||||||||||||||||| |||  | |||||| ||||||||||||||| ||||    
T  12758965 caccaacaacatctcatttctccacacaaatcataaatcctgcaaacccaagccatgaattatcaccaacaacatgacttaacaacaacaacaacaattg 12759064  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| |||||| |||||||   |||||||||||||||||||    
T  12759065 atcatgaaacttatcataattcaccaacaacatagcataattcaccaattgag 12759117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 3049565 - 3049723
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | ||||||||    
T  3049565 acaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatctattgatca 3049664  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||| ||||| ||||||||||||||   ||||||||||||||||||| |||||||||    
T  3049665 tgaaacttatcacaattcatcaacaacatagcataattcaccaattgagcataatttac 3049723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 2028893 - 2029061
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||||| | ||||||||| ||||| |||||||||  | |||||||||||| ||||||| ||||||||| |||| |  | || ||| |||||| ||||||     
T  2028893 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagtcatgaattagcatccataacatcacttaacaacgacaacat 2028992  T
Q  146 ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | |||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  2028993 ctattgatcatgaaacttatcacaattcatcaacaatcatgcataattcaccaattgagcataatttac 2029061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 15822701 - 15822548
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| ||||||||||||| |||| | |||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||||| | |||    
T  15822701 caccaacaacatctcatttctcaaccacaaaccatgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaatt 15822602  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||| ||||||| | ||||||||||||| |||||    
T  15822601 gatcatgaaacttatcacaattcaacaacaacaaagcataattcaccatttgag 15822548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 1937290 - 1937127
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||| ||  ||||||||||||| || | |||||||||||||||||||| |||| || ||||||||  ||||||||||||| ||    
T  1937290 atttcacaaaaccaccaacaataatccatttctcaacaaaaaattatgaatcatgcaaacccaagtcatgtatcatcatcaacaatatgactaaacatca 1937191  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||            ||||||||||||||||| |||||||||||||||||| |||||||||    
T  1937190 acaacaaccattgatcat------------aattcatcaacaaccatacataattcaccaattgagcataatttac 1937127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 52 - 182
Target Start/End: Complemental strand, 45452435 - 45452305
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||  | |||||  | |||||||||| || ||||    
T  45452435 caccaacaacatctcatttctccacacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacgacaattg 45452336  T
Q  152 atcatgaaacatatcaaaattcatcaacaac 182  Q
    |||||||||| ||||| ||||||||||||||    
T  45452335 atcatgaaacttatcacaattcatcaacaac 45452305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 3894998 - 3895155
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||  ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |    
T  3894998 aaaccaacaacaacaacttattttacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 3895097  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
     |||||||||||||| ||||| ||||||||||||||   |||||||||||||||||||    
T  3895098 tattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 3895155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 41 - 204
Target Start/End: Complemental strand, 16570287 - 16570122
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| ||| |||| |||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |  | || ||| | ||||||    
T  16570287 ttttaccaaaacacccacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaa 16570188  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 204  Q
    ||||| | |||||||||||||| ||||  |||||| |||||||   ||||||||| ||||||||||    
T  16570187 caacatcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgag 16570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 41 - 204
Target Start/End: Original strand, 16595375 - 16595540
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| ||| |||| |||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |  | || ||| | ||||||    
T  16595375 ttttaccaaaacacccacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattatcatccacgacatcacttagcaacaa 16595474  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 204  Q
    ||||| | |||||||||||||| ||||  |||||| |||||||   ||||||||| ||||||||||    
T  16595475 caacatcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgag 16595540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 57 - 201
Target Start/End: Complemental strand, 26070529 - 26070384
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |  | || ||| | ||||||||||| | ||||||||    
T  26070529 acaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgatca 26070430  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||||| ||||| ||||||||||||||    |||||||||||||||    
T  26070429 tgaaacttatcacaattcatcaacaacataacataattcaccaatt 26070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 57 - 201
Target Start/End: Complemental strand, 26094316 - 26094171
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||| |  | || ||| | ||||||||||| | ||||||||    
T  26094316 acaacaacttatttctcaacaacaaatcatgaatcatgcatacccaagccatgaataatcatccacaacatcacttagcaacaacaacatcaattgatca 26094217  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||||| ||||| ||||||||||||||    |||||||||||||||    
T  26094216 tgaaacttatcacaattcatcaacaacataacataattcaccaatt 26094171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 47289758 - 47289911
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||| | |||||  ||||||||||||||| | ||||||||||||||||||||   | |||||| |||| ||||| |||| ||    
T  47289758 caccaacaacatctcatttctccataacaaaatcatgaatcatgcaa-cacaagccatgaattatcatcatcaacatgacttaacagcaacagcaacaat 47289856  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||| | ||| |||||||||||||| | |||||||||||||||||||    
T  47289857 tgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgag 47289911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 12248395 - 12248237
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||| ||||||| |||| ||||||||| |  | || ||| | ||||||||||| |    
T  12248395 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagtcatgcattatcatccacaacatcacttagcaacaacaacatc 12248296  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 204  Q
    ||||||||||||| | ||||| |||||| |||||||   ||||||||| ||||||||||    
T  12248295 cattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 12248237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 44865204 - 44865360
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgact---aaacaacaacaacaac 146  Q
    |||| |||||| |||||||||| | |||||  |||||||| |||||| |||||||||||||||||||| ||  | ||||||    |||||||||||||||    
T  44865204 caccaacaacatctcatttctccataacaaaatcatgaattatgcaa-cccaagccatgaattatcataaactacatgacttaacaacaacaacaacaac 44865302  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
     ||| |||||||||| ||||| |||||||||||||  |||||||||||||||||||||    
T  44865303 aattaatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgag 44865360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 49047955 - 49047813
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| |||| ||| |||||| ||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |||  | || ||| | ||||||    
T  49047955 ttttaccaaactaccaacaacatctcgtttctcaacaacaaatcatgaatcatgcatacccaagccatgaattatcagcaacaacatcacttagcaacaa 49047856  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    ||||| | |||||||||||| | ||||| |||||| |||||||    
T  49047855 caacatcaattgatcatgaatcttatcacaattcaacaacaac 49047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 41 - 204
Target Start/End: Original strand, 13274753 - 13274918
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| |||| ||| |||||| ||||||||||||||||||  ||||||||||||| ||| ||||||||||| ||||||||  | || ||| | ||||||    
T  13274753 ttttaccaaactaccaacaacatctcatttctcaacaacaaaacatgaatcatgcataccaaagccatgaatcatcatcaacaacatcacttagcaacaa 13274852  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 204  Q
    ||||| | |||||||||||| | ||||| |||||| |||||||   ||||||||| ||||||||||    
T  13274853 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgag 13274918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 14272203 - 14272049
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaag 103  Q
    ||||||| ||| | |||||||||||| ||||||||||||||||||||||||  ||||||||||||||||| || | |||||||||| ||| | || ||||    
T  14272203 acatcattaaaataaaacttcttcatcatcaacccattttacaaaaccaccaccaacaactcatttctcatcatctaatcatgaattatgaacactcaag 14272104  T
Q  104 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 158  Q
    |||||||| |||| |||  |||| | | | ||||||||||| | ||||| |||||    
T  14272103 ccatgaatcatcaacaacaatatcatttagcaacaacaacatcaattgaacatga 14272049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 143622 - 143769
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||| | |||||  |||||||| |||||| |||||||||||||||||||| ||  | |||||| |||||||||||      |    
T  143622 caccaacaacatctcatttctccataacaaaatcatgaattatgcaa-cccaagccatgaattatcattaacaacatgacttaacaacaacaa------t 143714  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||| | ||| |||||||||||||| | |||||||||||||||||||    
T  143715 tgatcatgaaacttttcacaattcatcaacaacaaagcataattcaccaattgag 143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 211
Target Start/End: Complemental strand, 17224220 - 17224047
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||||| ||| | ||||||||||||||| ||||| ||  | || ||| | |||||    
T  17224220 attttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcattaacaacatcacttagcaaca 17224121  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaa-ttgagtataatt 211  Q
    |||||| | ||||| |||||  | ||  | |||||| |||||||   |||||||||| ||| ||||||||||||    
T  17224120 acaacatcaattgaacatgactcttacaacaattcaacaacaacatagcataattcaacaatttgagtataatt 17224047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 12370127 - 12369957
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | || |||||| ||||||||| ||||| |||||||||||||| ||| ||||||||||| || ||  |  | || ||| |     
T  12370127 acccattttcaccaaaccaacaactacaacttatttctcaataacaaatcatgaatcatgcatacctaagccatgaataattatgcacaacatcacttag 12370028  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| | ||| |||||||||  ||||| |||||| ||||||| | |||||||||||||||||||    
T  12370027 caacaacaacatcaattaatcatgaaagttatcacaattcaacaacaacaaggcataattcaccaattgag 12369957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 16915217 - 16915067
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | ||||||||||| |||||  || ||| |||||| | ||| | ||||||||||||||| |||| |||  ||||||||     
T  16915217 tcaacccattttacaaaaccaacaacaacaactcaattctcttcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatgactt 16915118  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  16915117 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 16915067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 48356602 - 48356752
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | ||||||||||| |||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  48356602 tcaacccattttacaaaaccaacaacaacaactcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 48356701  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  48356702 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaac 48356752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 13377485 - 13377667
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    ||||||||||||| || |||||| | ||||||||| |||||||| || ||| |||||| | ||| | ||||||||||||||| ||||||||  | || ||    
T  13377485 atcaacccattttcaccaaaccaacaacaacaacttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattac 13377584  T
Q  130 taaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaa-ttgagtataatt 211  Q
    | | ||||||||||| | ||||| |||||| | ||||| |||||| |||||||   |||||||| | ||| ||||||||||||    
T  13377585 ttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattaatcaatttgagtataatt 13377667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 4484683 - 4484797
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    ||||||||||||| |||||||||   ||||||||| |||||||| || ||| |||||| ||||| | |||||||| |||||| |||| |||  ||||  |    
T  4484683 atcaacccatttttacaaaaccaagcacaacaacttatttctcatcatcaaatcatgattcatgaatacccaagctatgaatcatcaacaacaatatctc 4484782  T
Q  130 taaacaacaacaaca 144  Q
    | |||||||||||||    
T  4484783 ttaacaacaacaaca 4484797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 4446168 - 4446249
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaat 111  Q
    ||||||||||||| ||||||||| | ||||||||||||||| || || ||| |||||| | ||| | |||||||||||||||    
T  4446168 atcaacccatttttacaaaaccaacaacaacaactcatttcacatcatcaattcatgatttatgaacacccaagccatgaat 4446249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 14935319 - 14935400
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaat 111  Q
    ||||||||||||| ||||||||| | ||||||||| |||||||| |||| |||||||| | ||| | |||||| ||||||||    
T  14935319 atcaacccatttttacaaaaccaacaacaacaactgatttctcatcaacaaatcatgatttatgaacacccaaaccatgaat 14935400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 15362912 - 15362993
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaat 111  Q
    ||||||||||||| ||||||||| | ||||||||| |||||||| |||| |||||||| | ||| | |||||| ||||||||    
T  15362912 atcaacccatttttacaaaaccaacaacaacaactgatttctcatcaacaaatcatgatttatgaacacccaaaccatgaat 15362993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 34241477 - 34241393
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    ||||||| ||||||||||||| | |||||||||||||| ||| || | |||||||| | ||| | || |||||||||||| ||||    
T  34241477 tcaaccctttttacaaaaccaacaacaacaactcatttttcatcatcaaatcatgatttatgaacactcaagccatgaatcatca 34241393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 6373 - 6198
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||||| |||| || ||||||||  |||| |||||||||||    
T  6373 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaatattactaaacaaca 6274  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  6273 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 6198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 31570 - 31395
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| | |||||||||||||||| |||||||| || ||||||||  ||||||||||||||||    
T  31570 atttcacaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 31471  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  31470 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 31395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 41274 - 41449
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| | |||||||||||||||| |||||||| || ||||||||  ||||||||||||||||    
T  41274 atttcacaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaacctaagccatgtatcatcatcaacaatatgactaaacaaca 41373  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  41374 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 41449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 2e-60; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 14951713 - 14951902
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||| || ||| |||| |||||||  |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  ||    
T  14951713 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaat 14951812  T
Q  125 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  14951813 atgactaaataacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 14951902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 25119498 - 25119322
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaac 137  Q
    |||| ||||||||||| |||||||  ||||||||||||||||  | ||||||||||||||||||||||||| || || |||||  |||||||||||||||    
T  25119498 atttcacaaaaccaccaacaacaatccatttctcaacaacaaaattatgaatcatgcaaacccaagccatgtatcattatcaacaatatgactaaacaac 25119399  T
Q  138 aacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||    
T  25119398 aacaacaaccattgatcatgaaacatatcacaattcatcaaaaaccatgcataattcaccaattgatcataatttac 25119322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 53705003 - 53704850
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |||    
T  53705003 caccaacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaatt 53704904  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  53704903 gatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgag 53704850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 5682817 - 5682642
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||||| |||  || ||||||||  |||||| |||| ||||    
T  5682817 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagacatatatcatcatcaacaatatgaataaaaaaca 5682718  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  5682717 acaacaaccaataatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 5682642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 27 - 208
Target Start/End: Complemental strand, 55376893 - 55376710
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||| |  ||| |||| ||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |     
T  55376893 tcataatcaacccattttcatcaaaacaccaacatcatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaac 55376794  T
Q  125 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtata 208  Q
    || | | ||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||    
T  55376793 ataatttaacaacaacaacaacaattgatcatgaaacttatcacaattcatcaacaacaatgtataattcaccaattgagtata 55376710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 34395222 - 34395387
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||  | |||||  | |||||    
T  34395222 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatagcaaca 34395321  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||| | |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  34395322 acaacatcaattgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 34395387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 208
Target Start/End: Complemental strand, 23270204 - 23270047
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||    
T  23270204 caccaacaacatctcatttctcaaccacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaatt 23270105  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtata 208  Q
    |||||||| || ||||| |||||||||||||| |||||||||||| ||||||||||||    
T  23270104 gatcatgatacttatcacaattcatcaacaacaatgcataattcatcaattgagtata 23270047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 44055892 - 44056045
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | ||| |||||| ||||||||| | |||    
T  44055892 caccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatggctaaaccacaacaacatcaatt 44055991  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||||||||||  |||||||||||||||||||||    
T  44055992 gatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgag 44056045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 16732146 - 16732299
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||| ||| | |||    
T  16732146 caccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacgacatcaatt 16732245  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| ||||||||||||||   |||||||||||||||||||    
T  16732246 gatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 16732299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 44346816 - 44346957
Alignment:
Q  64 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 162  Q
    |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | || |||||||||||||||||||  ||||||||||||||    
T  44346816 ctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacgacatcactaaacaacaacaacaacatttgatcatgaaaca 44346915  T
Q  163 tatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| ||||||| |||||| ||| |||||||||||||||||    
T  44346916 tatcacaattcatgaacaacaatgtataattcaccaattgag 44346957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 52 - 202
Target Start/End: Complemental strand, 53907966 - 53907818
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||| ||||||||||||   ||    
T  53907966 caccaacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaatcaacaacaacaa---tt 53907870  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattg 202  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  53907869 gatcatgaaacatttcacaattcatcaacaacaatgcataattcaccaattg 53907818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 15272586 - 15272427
Alignment:
Q  57 acaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 154  Q
    ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||    
T  15272586 acaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatc 15272487  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  15272486 atggaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 15272427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 30457880 - 30458033
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||| | |||||  | |||||| |||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| ||    
T  30457880 caccaacaacatctcatttctctataacaaaataatgaattatgcaa-cccaagccatgaattatcatcaaccacatgacttaacaacaacaacaacaat 30457978  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||    
T  30457979 tgatcatgaaacttatcacaattcatcaacaacaatgcgtaattcaccaattgag 30458033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 67 - 204
Target Start/End: Complemental strand, 21959718 - 21959580
Alignment:
Q  67 atttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatat 165  Q
    |||||||||| |||| | ||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||||| | |||||||||||||| |||    
T  21959718 atttctcaaccacaaactatgaatcatgcaagcccaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaattgatcatgaaacttat 21959619  T
Q  166 caaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    || ||||||||||||||   |||||||||||||||||||    
T  21959618 cacaattcatcaacaacatagcataattcaccaattgag 21959580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 204
Target Start/End: Complemental strand, 820177 - 820033
Alignment:
Q  58 caacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||| |||||||||| | |||||  ||||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||||||||   |||||||    
T  820177 caacatctcatttctccataacaaaatcatgaatcatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaa---ttgatca 820082  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  820081 tgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 820033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 8872699 - 8872588
Alignment:
Q  96 aacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacca---ttgatcatgaaacatatcaaaattcatcaacaaccatgcataat 192  Q
    |||||||||||||| ||||||||||  | |||||||||||||||||||||| |   ||||||||||||||||||| |||||||||||||| | |||||||    
T  8872699 aacccaagccatgagttatcatcaacaacatgactaaacaacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaacgcataat 8872600  T
Q  193 tcaccaattgag 204  Q
    ||||||||||||    
T  8872599 tcaccaattgag 8872588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 16522748 - 16522851
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcattt-ctcaacaacaatcatgaatcatgcaaacccaag 103  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||   ||| | |||||||    
T  16522748 acatcatcaaaatcaaacttcttctttatcaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 16522847  T
Q  104 ccat 107  Q
    ||||    
T  16522848 ccat 16522851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 12837464 - 12837317
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| ||||||| ||    
T  12837464 acaacaacttatttctca-caacaaatcatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgacca 12837366  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||| ||||| |||| | |||||||   |||||||||||||||||||    
T  12837365 tgaaacttatcacaatttaacaacaacatagcataattcaccaattgag 12837317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 30232761 - 30232613
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| ||||| ||||||||| | |||||| ||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| ||||||||||    
T  30232761 acaacaacttatttcacaacaacaaattatgaataatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatccattgatca 30232662  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||| ||||| |||| | |||||||   |||||||||||||||||||    
T  30232661 tgaaacttatcacaatttaacaacaacatagcataattcaccaattgag 30232613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 18494602 - 18494467
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||| ||||||  | || ||| |||||||||| ||||    
T  18494602 aaaccaccaacaacatctcatttctcaacaacaagtcatgaatcatgcatacccaagccatgagttaccatcaacaacatcacttaacaacaacagcaac 18494503  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaac 182  Q
     |||||||||||| | || || |||||| |||||||    
T  18494502 aattgatcatgaatcttaacacaattcaacaacaac 18494467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 9295624 - 9295727
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcattt-ctcaacaacaatcatgaatcatgcaaacccaag 103  Q
    ||||||||||| |||||||||||| |||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||   ||| | |||||||    
T  9295624 acatcatcaaaatcaaacttcttctttatcaactcattttacataaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 9295723  T
Q  104 ccat 107  Q
    ||||    
T  9295724 ccat 9295727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 195
Target Start/End: Complemental strand, 13809775 - 13809636
Alignment:
Q  57 acaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    |||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||  | || | | | ||||||||||| | ||||||||    
T  13809775 acaacatctcatttctcaacaaccaatcatgaatcatgcatatccaagccatgaattatcatcaacaacatcaattagcaacaacaacatcaattgatca 13809676  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattca 195  Q
    |||| | ||||| |||||| |||||||   ||||||||||    
T  13809675 tgaatcttatcacaattcaacaacaacatagcataattca 13809636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 203
Target Start/End: Complemental strand, 45459096 - 45458973
Alignment:
Q  80 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    ||||||||||||||||||||||||||||| |||||| ||||  | |||||  | ||||||||||| | |||| ||||||||| ||||| |||||| ||||    
T  45459096 aatcatgaatcatgcaaacccaagccatggattatcttcaacaacatgacatatcaacaacaacatcaattggtcatgaaacttatcacaattcaacaac 45458997  T
Q  180 aaccatgcataattcaccaattga 203  Q
    | | | ||||||||||||||||||    
T  45458996 agcaaagcataattcaccaattga 45458973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 181
Target Start/End: Original strand, 27960938 - 27961078
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| |||| ||| |||| | ||||||||||||||| || |||| ||||||||| |||||| |||||||||||||||||  | || ||| ||||||||    
T  27960938 ttttaccaaactaccaacaatatctcatttctcaacaataaatcat-aatcatgcatacccaaaccatgaattatcatcaacaacatcacttaacaacaa 27961036  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaa 181  Q
    ||||| | |||||||||||| | ||| | |||||| ||||||    
T  27961037 caacatcaattgatcatgaatcttataacaattcaacaacaa 27961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 37957314 - 37957230
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||||||  |||| |||||||||||||| ||| |||| |||||||||| ||||| ||||||||| ||||||||||    
T  37957314 tcaacccattttacaaagtcaccaacaacaactcatttatcatcaacaaatcatgaattatgcacacccaagccgtgaattatca 37957230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 7186159 - 7185983
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaa 102  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| ||   |||||||||||| ||||| || | |||||||| | ||  | ||||||    
T  7186159 acatcatcaaaatcaaacttcttcattatcaacccattttcacaaaaaca---acaacaactcatatctcatcatcaaatcatgatttataaacacccaa 7186063  T
Q  103 gccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    ||||||||| |||| |||  ||||  || | ||||||||||| | ||| | |||||| |  |||| |||||| |||||||    
T  7186062 gccatgaatcatcaacaataatatctcttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaac 7185983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 7965000 - 7964890
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | |||||||||||||||||| || | |||||||| | ||| | || |||||||||||| |||| |||  |||| |||     
T  7965000 tcaacccattttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacactcaagccatgaatcatcaacaacaatatcactt 7964901  T
Q  132 aacaacaacaa 142  Q
    | |||||||||    
T  7964900 agcaacaacaa 7964890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 201
Target Start/End: Complemental strand, 52265749 - 52265628
Alignment:
Q  80 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    |||||||||| ||| | ||||||||||||||| |||| ||   |||| ||| | ||||||||||| | ||||| |||||| | ||||| |||||| ||||    
T  52265749 aatcatgaattatgaacacccaagccatgaatcatcaacatcaatatcacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaac 52265650  T
Q  180 aaccatgcataattcaccaatt 201  Q
    |||  ||||||||||| |||||    
T  52265649 aacattgcataattcaacaatt 52265628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 19822065 - 19821981
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    ||||| |||||||||||  |||| | |||||||||||||||| |||| |||||||||| ||| | ||||||||||||||| ||||    
T  19822065 tcaactcattttacaaagtcaccaaaaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatca 19821981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 201
Target Start/End: Original strand, 15044784 - 15044955
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    ||||||||||||| || ||| || | ||||||| | |||||||| || ||| |||||| | ||| | ||||||||||||||| ||||||||  | || ||    
T  15044784 atcaacccattttcaccaaagcaacaacaacaatttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacatcac 15044883  T
Q  130 taaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    | | ||||||||||| | ||||| |||||| | ||||| |||||| |||||||   |||||||||| |||||    
T  15044884 ttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcatcaatt 15044955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 211
Target Start/End: Complemental strand, 15109640 - 15109458
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    ||||||||||||| || ||| || | ||||||| | |||||||| || ||| |||||| | ||| | ||||||||||||||| ||||||||  | || ||    
T  15109640 atcaacccattttcaccaaagcaacaacaacaatttatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcatcaacaacattac 15109541  T
Q  130 taaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaa-ttgagtataatt 211  Q
    | | ||||||||||| | ||||| |||||| | ||||| |||||| |||||||   |||||||| | ||| ||||||||||||    
T  15109540 ttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatttatcaatttgagtataatt 15109458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 14901197 - 14901274
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||||| |||||||| ||||||||| || ||| |||||||| ||||| ||||| | ||||||| ||||    
T  14901197 attttacaaaaccaccaacaacaacccatttctcatcatcaattcatgaattatgcacacccatgtcatgaatcatca 14901274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 47535328 - 47535251
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||| | ||||||||||||||||||  ||| |||||||||| ||| | || |||||||||||| ||||    
T  47535328 attttacaaaaccatcaacaacaactcatttctcattaacaaatcatgaattatgaacactcaagccatgaatcatca 47535251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 41166228 - 41166109
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||||||||||||| |||| |||||| | | ||| | ||||||||||||| | |||| |||  | || ||| | |||||    
T  41166228 atttcacaaaaccacccacaacaactcatttctcatcaacaaatcataagttatgaatacccaagccatgattcatcaacaacaacatcacttagcaaca 41166129  T
Q  139 acaacaaccattgatcatga 158  Q
    |||||| | ||||| |||||    
T  41166128 acaacatcaattgaacatga 41166109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 41256660 - 41256546
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    ||||||||||||| | ||||||| | |||||||||||||||||| || | |||||||| | ||| | |||||| |||||||| |||| |||  ||||  |    
T  41256660 atcaacccatttttataaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatctc 41256561  T
Q  130 taaacaacaacaaca 144  Q
    | |||||||||||||    
T  41256560 ttaacaacaacaaca 41256546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 181
Target Start/End: Original strand, 18276392 - 18276541
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | ||||||||||| | |||| |  | |||||||| | ||| | ||||||||||| ||| |||| |||  |||| |||     
T  18276392 tcaacccattttacaaaaccaacaacaacaactcaatactcatcgtcaaatcatgatttatgaacacccaagccatcaatcatcaacaacaatatcactt 18276491  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaa 181  Q
      ||||||||||| | ||||| |||||| |  |||| |||||| ||||||    
T  18276492 tgcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaa 18276541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 12802 - 12635
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||| | ||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12802 aaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaac 12703  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  12702 cattaatcatgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataatttac 12635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 19183 - 19049
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||| | ||||||||||||||| | |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19183 aaaccaacaacaacaatttatttctcaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaac 19084  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaa 181  Q
    |||| |||||||||||||||| |||||||||||||    
T  19083 cattaatcatgaaacatatcacaattcatcaacaa 19049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 115; Significance: 1e-58; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 57 - 214
Target Start/End: Original strand, 79846 - 80004
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| ||||| ||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  79846 acaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattatcatcaaccatatgactaaacaacaacaacaaccattaatca 79945  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  79946 tgaaacatatcacaattcatcaacaatcatgcataattcaccaattgagcataatttac 80004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 46171 - 46295
Alignment:
Q  80 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    |||||||||| ||| | ||||||||||||||| |||| |||  |||| ||| |  |||||||||| |||||||||||||||| ||||| |||| | ||||    
T  46171 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagaaacaacaacatccattgatcatgaaacttatcacaatttaacaac 46270  T
Q  180 aaccatgcataattcaccaattgag 204  Q
    |||   |||||||||||||||||||    
T  46271 aacatagcataattcaccaattgag 46295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 40664 - 40788
Alignment:
Q  80 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    |||||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | ||||||||||| |||||||||||||||| ||||| |||  | ||||    
T  40664 aatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaacaacaacatccattgatcatgaaacttatcacaatgtaacaac 40763  T
Q  180 aaccatgcataattcaccaattgag 204  Q
    ||    |||||||||||||||||||    
T  40764 aatatagcataattcaccaattgag 40788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 22366970 - 22367158
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||| || ||| |||| |||||||  |||||||||||||||| |||||||||||||||||||||| |||| || ||||||||  ||    
T  22366970 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgtatcatcatcaacaat 22367069  T
Q  125 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||    
T  22367070 atgactaaacaacaacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcat-attcaccaattgagcataatttac 22367158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 21859984 - 21860151
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||| ||||||||||||||||| | ||||||||||||||||| ||||||| || ||||||||  ||||||||||||||||||||||||    
T  21859984 aaaccaacaacaacaattcatttctcaacaacaaattatgaatcatgcaaacccgagccatgtatcatcatcaacaatatgactaaacaacaacaacaac 21860083  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  21860084 cattaatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 21860151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 27 - 214
Target Start/End: Complemental strand, 15861728 - 15861541
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||| || ||| |||| |||||||  |||||||||||||||| |||||||||||||||||||||| |||| || ||||||||  ||    
T  15861728 tcataatcaacccattttcaccaaaacaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagtcatgcatcatcatcaacaat 15861629  T
Q  125 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  15861628 atgactaaacaa--acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 15861541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 44035255 - 44035086
Alignment:
Q  45 acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaac 143  Q
    ||||||||||| |||||||  |||||||||||||||| | ||||||||||||||| |||||||| | | ||||||||  |||||||||||||||||||||    
T  44035255 acaaaaccaccaacaacaatccatttctcaacaacaaattatgaatcatgcaaactcaagccatta-tcatcatcaactatatgactaaacaacaacaac 44035157  T
Q  144 aaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  44035156 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaaatgagcataatttac 44035086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 49967628 - 49967780
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||| ||||||||||| ||||||||||||||||| |||| |||||||||||||||  | |||||| ||||||||||||| | ||||    
T  49967628 caccaacaacatctcattcctcaacaacaaccatgaatcatgcaaaccgaagcaatgaattatcatcaacaacatgacttaacaacaacaacatcaattg 49967727  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| |||||||||||||| ||| |||||||||||||||||    
T  49967728 atcatgaaacgtatcacaattcatcaacaacaatgtataattcaccaattgag 49967780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 35522588 - 35522436
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | ||||    
T  35522588 caccaacaacatctcatttctcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacgtatcaacaacaacatcaattg 35522489  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| |||||| ||||||| | |||||||||||||||||||    
T  35522488 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 35522436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 41212046 - 41212202
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaaca---acaacaacaacc 147  Q
    |||| |||||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||||   |||||||||||     
T  41212046 caccaacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaaca 41212145  T
Q  148 attgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||| |||||||    
T  41212146 attgatcatgaaacatatcacaattcatcaacaacagtgcataattcactaattgag 41212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 21718206 - 21718358
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | ||||    
T  21718206 caccaacaacatctcatttctcaagaacaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 21718305  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| || |||||||||||   |||||||||||||||||||    
T  21718306 atcatgaaacttatcacaaatcatcaacaacatagcataattcaccaattgag 21718358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 204
Target Start/End: Complemental strand, 22403375 - 22403227
Alignment:
Q  57 acaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 154  Q
    |||||| |||||||||| | |||||  |||||||||||| ||||||||||||||||||||||||||  | |||||| |||||||||||||||  || |||    
T  22403375 acaacatctcatttctccataacaaaatcatgaatcatg-aaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacaacagttaatc 22403277  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  22403276 atgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 22403227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 35054716 - 35054886
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||||| ||| | ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||    
T  35054716 acccattttcaccaaaccaacaacaacaacttattccacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaa 35054815  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| |||||||||||||||| ||||| | ||||||||| ||   |||||||||||||||||||    
T  35054816 caacaacaacatccattgatcatgaaacttatcacagttcatcaactacatagcataattcaccaattgag 35054886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 51627945 - 51627805
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat-atgactaaacaaca 138  Q
    |||||| |||||||| |||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| ||||| || ||| | |||||    
T  51627945 ttttaccaaaccaccaacaacatctcatttctcaacagcaaatcatgaatcatgcatacccaagccatgaattatcatc-aacatcatcacttagcaaca 51627847  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaaca 180  Q
    |||||| | |||||||||||| | ||||| |||||| |||||    
T  51627846 acaacatcaattgatcatgaatcttatcacaattcaacaaca 51627805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 27330026 - 27329872
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacc 147  Q
    |||||| | ||||||||| ||||  ||||||  || |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| ||    
T  27330026 aaaccaacaacaacaacttatttgacaacaa--attatgaatcatgcatacccaagccatgaattaacatccataacatcacttaacaacaacaacatcc 27329929  T
Q  148 attgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||||| ||||| |||| | |||||||   |||||||||||||||||||    
T  27329928 attgatcatgaaacttatcacaatttaacaacaacatagcataattcaccaattgag 27329872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 27674755 - 27674838
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||||||  |||| |||||||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  27674755 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaaaaatcatgaattatgcacacccaagccatgaattatca 27674838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 22829712 - 22829629
Alignment:
Q  34 caacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    ||||||||||||||||  |||| |||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||||    
T  22829712 caacccattttacaaagtcaccaacaacaactcatttctcatcaacaaatcatgaattatgcacacccaagccatgaattatca 22829629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 9784341 - 9784239
Alignment:
Q  80 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    ||||||||||||||||| |||||||||||||| ||||||||  | |||||  | ||||||||||| | ||||||| |||||| ||||| |||||| ||||    
T  9784341 aatcatgaatcatgcaagcccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcttgaaacttatcacaattcaacaac 9784242  T
Q  180 aac 182  Q
    |||    
T  9784241 aac 9784239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 17608886 - 17609036
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    |||||||||||| |||||||| | ||||||||||| ||||||  | ||| |||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  17608886 tcaacccattttccaaaaccaacaacaacaactcaattctcataatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 17608985  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    ||||||||||||||| ||||| |||||| |  |||| |||||| |||||||    
T  17608986 aacaacaacaacaacaattgaacatgaatctcatcataattcaacaacaac 17609036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 19603055 - 19603139
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||||||  |||| |||||||||||||||||| |||| |||||||||| || || ||||||| ||||||||||||    
T  19603055 tcaacccattttacaaagtcaccaacaacaactcatttctcatcaacaaatcatgaattattcacacccaagtcatgaattatca 19603139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 38033962 - 38033882
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaatta 113  Q
    |||||||||||||||||  |||| ||||||||| |||||||| |||||||| ||||  ||||| |||||||||||||||||    
T  38033962 tcaacccattttacaaagtcaccaacaacaacttatttctcatcaacaatcgtgaactatgcacacccaagccatgaatta 38033882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 20177140 - 20177245
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||||||||||||  |||||| |||||||| ||| | | ||||||||||||| ||||||||  | || ||| | |||||    
T  20177140 atttcacaaaaccaccaacaacaactcatttctcttcaacaaatcatgaattatgaatatccaagccatgaatcatcatcaacaacatcacttagcaaca 20177239  T
Q  139 acaaca 144  Q
    ||||||    
T  20177240 acaaca 20177245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 20955728 - 20955644
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 116  Q
    ||||||| |||||||||  |||| ||||||||||||||| || |||||| ||| |||| || || ||| ||||||||||||||||    
T  20955728 tcaaccccttttacaaagtcacccacaacaactcatttcacaccaacaattcacgaattattcacaccgaagccatgaattatca 20955644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 21194980 - 21195084
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    ||||| ||||||| | |||||||||||||||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  ||||  || ||||||||    
T  21194980 ttttataaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatctcttaacaacaa 21195079  T
Q  140 caaca 144  Q
    |||||    
T  21195080 caaca 21195084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 158
Target Start/End: Complemental strand, 13377122 - 13377003
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| |||||||| || ||||||| |||||||||| |||||| |||||||| ||| | || |||||||||||| | ||||||  | || ||| | |||||    
T  13377122 atttcacaaaaccgccaacaacaattcatttctcatcaacaaatcatgaattatgaatactcaagccatgaatcaacatcaacaacatcacttagcaaca 13377023  T
Q  139 acaacaaccattgatcatga 158  Q
    |||||| | ||||| |||||    
T  13377022 acaacatcaattgagcatga 13377003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 159
Target Start/End: Complemental strand, 37234149 - 37234022
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | |||| |||||| || ||| || | |||||||| | ||| | ||||||| ||||||| |||| |||  |||| |||     
T  37234149 tcaacccattttacaaaaccaaccacaaaaactcaattttcatcatcaaatcatgatttatggacacccaagtcatgaatcatcaacaacaatatcactt 37234050  T
Q  132 aacaacaacaacaaccattgatcatgaa 159  Q
    | ||||||||||| | ||||| ||||||    
T  37234049 agcaacaacaacatcaattgaacatgaa 37234022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 9784248 - 9784184
Alignment:
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||||||||| | |||||||||||||| ||||| |||   |||||||| | ||||||||||||||||    
T  9784248 caacaacaacatcaattgatcatgaaacttatcacaat---tcaacaacaaagcataattcaccaatt 9784184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 41229221 - 41229149
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaat 111  Q
    ||||||| |||| ||| |||||||||||||||||| | || |||||||||| ||| | || ||||||||||||    
T  41229221 attttaccaaactaccaacaacaactcatttctcatccacaaatcatgaattatgaacactcaagccatgaat 41229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 430 - 234
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagc 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||    
T  430 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaaaagctcatttctcaacaacaatcatgaatcatgcaaacccaagc 331  T
Q  105 catgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
     |||||||||||||||  | |||||  | ||||||||||| | ||||||||| |||| ||||| |||||| ||||||| |  |||||||||| ||||    
T  330 tatgaattatcatcaacaacatgacatatcaacaacaacatcaattgatcattaaacttatcacaattcaacaacaacaaaacataattcacgaatt 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 6679 - 6603
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa 81  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  6679 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaagaacaactcaattctcaacaacaa 6603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 113; Significance: 2e-57; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 162469 - 162293
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaa-c 137  Q
    |||| ||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||||||||  || ||||||||  |||||||||||||| |    
T  162469 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatatatcatcatcaacaatatgactaaacaaac 162370  T
Q  138 aacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||    
T  162369 aacaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataatttac 162293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 164204 - 164345
Alignment:
Q  64 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 162  Q
    |||||||||||||||||| | | |||| ||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||  ||||||||||||||    
T  164204 ctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattaccatcaacaacatgactaaacaacaacaacaacatttgatcatgaaaca 164303  T
Q  163 tatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  164304 tatcacaattcatcaacaacaatgcataattcaccaattgag 164345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 166547 - 166379
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  ||||| |||||||||| ||||||||||||||||||||||||||| || ||||||||  |||| |       |||    
T  166547 atttcacaaaaccaccaacaacaatccatttttcaacaacaaatcatgaatcatgcaaacccaagccatgtatcatcatcaacaatatta-------aca 166455  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||    
T  166454 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccatgcagaattcaccaattgagcataatttac 166379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 116795 - 116690
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||||||||||||||| |||||||  ||||| ||| |||||| |||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | |||||    
T  116795 attttacaaaaccaccaacaacaatccatttttcatcaacaaatcatgaattatgaacacccaagccatgaatcatcaacaacaatatcacttagcaaca 116696  T
Q  139 acaaca 144  Q
    ||||||    
T  116695 acaaca 116690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 30056 - 30202
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  30056 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaatatgactaaacaaca 30155  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccat 185  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  30156 acaacaaccattgatcatgaaacatatcacaattcatcaacaaccat 30202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 22274688 - 22274862
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  ||||||||||||||||| |||||||||||||| ||||||||||  || ||||||||  ||||||||||||| ||    
T  22274688 atttcacaaaaccaccaacaacaatccatttctcaacaacaattcatgaatcatgcaa-cccaagccatctatcatcatcaacaatatgactaaacatca 22274786  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  22274787 acaacaaccattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 22274862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 23836975 - 23836822
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| ||| |||| ||||||||||||| ||||||||||||||||  | |||||||||||||||||||||| |||    
T  23836975 caccaacaacatctcatttctcaacaacaaatcaagaattatgcaaacccaagtcatgaattatcatcaacaaaatgactaaacaacaacaacaacaatt 23836876  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  23836875 gatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 23836822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 22283921 - 22284095
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| ||||||| ||||||||||||| |||| |||||||||||||| ||||||||||| || ||||||||  ||| ||||||||| ||    
T  22283921 atttcacaaaaccaccaacaacaattcatttctcaacagcaattcatgaatcatgcaa-cccaagccatgtatcatcatcaacaataagactaaacatca 22284019  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  22284020 aaaacaacgattgatcatgaaacacatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 22284095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 32465835 - 32465988
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||| | |||    
T  32465835 caccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacatcaatt 32465934  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||||||| ||| |||||||||||||||||||||    
T  32465935 gatcatgaaacttatcacaattcatcaagaacaatgcataattcaccaattgag 32465988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 25876206 - 25876036
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||||| ||||| ||| ||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||    
T  25876206 acccattttcaccaaaccaacaacaacaacttatttcacaataacaagccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaa 25876107  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||| |||||||||  ||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  25876106 caataacaacaacatttgatcatgaagcatatcacaattcatcaacaacaatgcataattcaccaattgag 25876036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 9653179 - 9653011
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||||| | ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||| |||||     
T  9653179 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacatcaacat 9653080  T
Q  146 ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | ||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  9653079 ctattgatcatgaaaaatatcgcaattcatcaacaaccatgcataattcaccaattgagtataatttac 9653011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 158
Target Start/End: Complemental strand, 19433649 - 19433495
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaag 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||| ||| | |||||||    
T  19433649 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaacacccaag 19433550  T
Q  104 ccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 158  Q
    |||||||| |||| |||  ||||  || | ||||||||||| | ||||| |||||    
T  19433549 ccatgaatcatcaacaacaatatctcttagcaacaacaacatcaattgaacatga 19433495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 60 - 214
Target Start/End: Complemental strand, 21274319 - 21274164
Alignment:
Q  60 acaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatg 157  Q
    |||||| ||||| |||||||||  | ||||||||||| | |||||||||||||||| |||| |  | || ||| ||||||||||||| | ||||||||||    
T  21274319 acaacttatttcacaacaacaaaattatgaatcatgcta-cccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatcatg 21274221  T
Q  158 aaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  21274220 aaacatattacaattcatcaacaaccatgcataattcaccaattgagtataatttac 21274164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 203
Target Start/End: Complemental strand, 4448402 - 4448251
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | ||||    
T  4448402 caccaacaacatctcatttttcaacacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 4448303  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 203  Q
    |||||||||| ||||| |||||| ||||||| | |||| |||||||||||||    
T  4448302 atcatgaaacttatcataattcaacaacaacaaagcatcattcaccaattga 4448251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 52 - 208
Target Start/End: Original strand, 6879414 - 6879571
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||| ||||||||||||| | | |||| ||  ||||||||| |||| |||||||||||  | ||||||||| |||||||||||| |||    
T  6879414 caccaacaacatctcaattctcaacaacaaaccaagaattatttaaacccaagacatgtattatcatcaacaacatgactaaataacaacaacaacaatt 6879513  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtata 208  Q
    |||||| |||||||||| |||||||||| ||| |||||||||||||||||||||||||    
T  6879514 gatcattaaacatatcacaattcatcaataacaatgcataattcaccaattgagtata 6879571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 28974026 - 28974179
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||||| | |||    
T  28974026 caccaacaacatctcatttctcatcaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaatt 28974125  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| || || ||||||||||||||   ||||||||| |||| ||||    
T  28974126 gatcatgaaacttaccacaattcatcaacaacatagcataattcgccaaatgag 28974179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 271148 - 271300
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||| |||||||  ||||||||||||||||||||||||| |||||||||||||||  | |||||  | ||||||||||| | ||||    
T  271148 caccaacaacatctcattcctcaacacaaatcatgaatcatgcaaacccaagctatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 271247  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| ||||| |||||| ||||||| |  ||||||||||||||||||    
T  271248 atcatgaaacttatcacaattcaacaacaacaaaacataattcaccaattgag 271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 25601989 - 25602154
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  |||||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||  | |||||  | |||||    
T  25601989 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacctaagccatgatttatcataaacaacatgacatagcaaca 25602088  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||| | |||||||||||||| ||||| ||||||||||| ||   |||||| ||||||||||||    
T  25602089 acaacatcaattgatcatgaaacttatcacaattcatcaaccacatagcataactcaccaattgag 25602154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 201
Target Start/End: Complemental strand, 36890972 - 36890805
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||||| ||||||||||||||| ||| |||||||||| ||||||||||||||| |||||| |  | || ||| |     
T  36890972 acccattttcaccaaaccaacaacaacaacttatttctcaacaacaaatcaagaatcatgcatacccaagccatgaataatcatccacaacatcacttag 36890873  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||||||||||| |||||||||||||| ||||| |||| |||||||||   ||||||||||||||||    
T  36890872 caacaacaacaacaattgatcatgaaacttatcacaatttatcaacaacatagcataattcaccaatt 36890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 52 - 168
Target Start/End: Original strand, 27261783 - 27261900
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||  | |||||| | ||||||||| | | |||    
T  27261783 caccaacaacatctcatttcttaacaacaaatcatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaatatcaatt 27261882  T
Q  151 gatcatgaaacatatcaa 168  Q
    ||||||||||| ||||||    
T  27261883 gatcatgaaacttatcaa 27261900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 24827044 - 24826961
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca-tttctcaacaacaatcatga 87  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||    
T  24827044 acatcatcaatatcaaacttcttctttatcaacccattttacaaaaccaccaacaacagctcattttctcaacaacaatcatga 24826961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 159
Target Start/End: Complemental strand, 3529 - 3403
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaa 132  Q
    |||||||||||||||||  |||| |||||||||||||||||| | |||||||||||| ||| | ||||||||||||||| ||||||||  | || ||| |    
T  3529 tcaacccattttacaaagtcaccaacaacaactcatttctcatctacaatcatgaattatgaacacccaagccatgaatcatcatcaacaacatcactta 3430  T
Q  133 acaacaacaacaaccattgatcatgaa 159  Q
     ||||||||||| | ||||| ||||||    
T  3429 gcaacaacaacatcaattgaacatgaa 3403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 181
Target Start/End: Complemental strand, 22580140 - 22579999
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| ||| |||| |||||| |||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||  | || ||  | || ||     
T  22580140 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcatacccaagccatgaattatcatcaacaacatcacatatcagcag 22580041  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaa 181  Q
    ||||| | |||||||||||||| ||||| |||||| ||||||    
T  22580040 caacatcaattgatcatgaaacttatcacaattcaacaacaa 22579999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 25212977 - 25213081
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcattt--ctcaacaacaatcatgaatcatgcaaacccaa 102  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||||||||  |||||||||||||  |||||||||||||||||   ||| | ||||||    
T  25212977 acatcatcaaaatcaaatttcttctttatcaacccattttacaaaaccaccaccaacaactcatttttctcaacaacaatcatgatatatgaacacccaa 25213076  T
Q  103 gccat 107  Q
    |||||    
T  25213077 gccat 25213081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 204
Target Start/End: Complemental strand, 24571572 - 24571408
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| |||||||| |||||| |||||||||||||||| ||||||||||||| || | ||||| ||||| ||||||||||  | || ||| ||||||||    
T  24571572 ttttaccaaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatacatagccaag-catgagttatcatcaacaacatcacttaacaacaa 24571474  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 204  Q
    ||||| | |||||||||||| | || || |||||| ||| |||   ||||||||| ||||||||||    
T  24571473 caacatcaattgatcatgaatcttaacacaattcaacaaaaacatagcataattcaaccaattgag 24571408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 43645824 - 43645886
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactca 67  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||||  ||||||||||    
T  43645824 acatcatcaaaatcaaactttttcattaccaacccattttacaaaaccaccaccaacaactca 43645886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 722353 - 722437
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||| ||||||||||  |||| |||||||||||| ||||| ||| || |||||||| ||||| ||||||||||||||||||||    
T  722353 tcaaccaattttacaaagtcaccaacaacaactcatatctcatcaataaatcatgaattatgcacacccaagccatgaattatca 722437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 201
Target Start/End: Original strand, 67952 - 68119
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| ||||||||| | ||||||||| |||||||| || ||| |||||||| ||| | || |||||||||||| | || |||  |||| ||| |     
T  67952 acccattttcacaaaaccaacaacaacaacttatttctcatcatcaaatcatgaattatgaacacgcaagccatgaatcaccaacaacaatatcacttag 68051  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||||||||| | ||||| |||||| | || || |||||| |||||||   |||||||||| |||||    
T  68052 caacaacaacatcaattgaacatgaatcttaccacaattcaacaacaacatagcataattcaacaatt 68119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 24884643 - 24884684
Alignment:
Q  32 atcaacccattttacaaaaccaccgacaacaactcatttctc 73  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  24884643 atcaacccattttacaaaaccaacaacaacaactcatttctc 24884684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 25305416 - 25305487
Alignment:
Q  46 caaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||| ||| |||||||||||||||||| |||| |||||||||| ||| | ||||| ||||||||| ||||    
T  25305416 caaaactaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaggccatgaatcatca 25305487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 23821892 - 23821767
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| ||||||||| | ||||||||| ||||| || || ||| |||||||| ||| | ||||| ||||||||| |||| |||  |||| ||| |     
T  23821892 acccattttcacaaaaccaacaacaacaacttatttcacatcatcaaatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttag 23821793  T
Q  134 caacaacaacaaccattgatcatgaa 159  Q
    ||||||||||| | ||||| ||||||    
T  23821792 caacaacaacatcaattgaacatgaa 23821767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 23830971 - 23830846
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| ||||||||| | ||||||||| ||||| || || ||| |||||||| ||| | ||||| ||||||||| |||| |||  |||| ||| |     
T  23830971 acccattttcacaaaaccaacaacaacaacttatttcacatcatcaaatcatgaattatgaacacccatgccatgaatcatcaacaacaatatcacttag 23830872  T
Q  134 caacaacaacaaccattgatcatgaa 159  Q
    ||||||||||| | ||||| ||||||    
T  23830871 caacaacaacatcaattgaacatgaa 23830846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 736 - 566
Alignment:
Q  45 acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaac 143  Q
    ||||||||||| |||| ||  |||||||||||||||| | || |||||||||||||||||||||| || ||||||||  |||||| |||| | |||||||    
T  736 acaaaaccaccaacaataatccatttctcaacaacaaattattaatcatgcaaacccaagccatgtatcatcatcaacaatatgagtaaatatcaacaac 637  T
Q  144 aaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  636 aaccattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 59 - 204
Target Start/End: Complemental strand, 11970 - 11825
Alignment:
Q  59 aacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 158  Q
    |||| |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||  | |||||| | ||||||||||| | |||||||||||    
T  11970 aacatctcatttctcaacaccaatcatgaaccatgcaaactcaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatga 11871  T
Q  159 aacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||| |||||||||||||||||||| |||||||||||||||||||||    
T  11870 aacttatcaaaattcatcaacaacaatgcataattcaccaattgag 11825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 32180 - 32333
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | | | || ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |||    
T  32180 caccaacaacatctcatttctcaacaacaaaccaaggattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaatt 32279  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||||| |||||||||||||| || ||||||||||||||||||    
T  32280 gatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgag 32333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 42123 - 41970
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | | | || ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |||    
T  42123 caccaacaacatctcatttctcaacaacaaaccaaggattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaatt 42024  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||||| |||||||||||||| || ||||||||||||||||||    
T  42023 gatcatgaaacatatcacaattcatcaacaacaattcataattcaccaattgag 41970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 94; Significance: 5e-46; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 132520 - 132367
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| ||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||    
T  132520 caccaacaacatttcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaatt 132421  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  132420 gatcatgaaacttatcacaattcatcaacaacgatgcataattcaccaattgag 132367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 11660 - 11818
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||  |  | ||| | ||||||||||| |    
T  11660 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcataaccaagccatgaattatcatcaacaacgtcacttagcaacaacaacatc 11759  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 204  Q
     |||||||||||||| ||||| |||||  |||||||   ||||||||| ||||||||||    
T  11760 aattgatcatgaaacttatcacaattctacaacaacatagcataattcaaccaattgag 11818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 203
Target Start/End: Original strand, 88289 - 88404
Alignment:
Q  88 atcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgc 187  Q
    |||||||| |||||||||| |||||| |||| |  | || ||| ||||||| ||||| | |||||||||||||| ||||| ||||||||||||||   ||    
T  88289 atcatgcatacccaagccaagaattagcatccataacatcacttaacaacagcaacatctattgatcatgaaacttatcacaattcatcaacaacatagc 88388  T
Q  188 ataattcaccaattga 203  Q
    ||||||||||||||||    
T  88389 ataattcaccaattga 88404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 70892 - 70739
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||| ||| |    
T  70892 caccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagtcatgaattatcatcaacaacatgactaaacaacaacaacatccaat 70793  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||||||||||  |||||||||||||||||||||    
T  70792 gatcatgaaacttatcacaattcatcaacaataatgcataattcaccaattgag 70739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 52 - 208
Target Start/End: Original strand, 60784 - 60940
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||||||| |||  |||||||||||||||||||||||| ||||||||||||||||  | |||||  | ||||||||||| | ||||    
T  60784 caccaacaacatctcatttctccacacaaatcatgaatcatgcaaacccaagtcatgaattatcatcaacaacatgacatatcaacaacaacatcaattg 60883  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtata 208  Q
    |||||||||| ||||| |||||| ||||||| | |||||||||||||||| ||||||    
T  60884 atcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattaagtata 60940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 1261 - 1093
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||||| | ||||||||| |||||||||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| |||||||||||||     
T  1261 aaaccaacaacaacaacttatttctcaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacat 1162  T
Q  146 ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  1161 ctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 5516 - 5363
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||  | |||||| | ||||||||||| | |||    
T  5516 caccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaatt 5417  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||    
T  5416 gatcatgaaacatatcacaattcatcaacaacaatgcctaattcaccaattgag 5363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 9156 - 8998
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||  | || ||| | ||||||||||| |    
T  9156 aaaccaccgacaacatctcatttctcaacaacaaatcatgaatcatgcatacctaagccatgaattatcatcaacaacatcacttagcaacaacaacatc 9057  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgag 204  Q
     |||||||||||||| ||||| |||| | |||||||   ||||||||| ||||||||||    
T  9056 aattgatcatgaaacttatcacaatttaacaacaacatagcataattcaaccaattgag 8998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 13669 - 13501
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||||| | ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  13669 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 13570  T
Q  146 ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  13569 ctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 13501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 21634 - 21475
Alignment:
Q  57 acaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 154  Q
    ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||||||||||||| | |||||||    
T  21634 acaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcattcataacatcacttaacaacaacaacatctattgatc 21535  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  21534 atgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 21475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 14921 - 15089
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||||| | ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  14921 aaaccaacaacaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 15020  T
Q  146 ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  15021 ctattgatcatgaaacatatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 15089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 22668 - 22821
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||||| | |||    
T  22668 caccaacaacatctcatttctcaataacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacaaaacaacaacaacatcaatt 22767  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||||||||||  |||||||||||||||||||||    
T  22768 gatcatgaaacttatcacaattcatcaacaaaaatgcataattcaccaattgag 22821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 17686 - 17519
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaaca-atcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| |||||||| || |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |    
T  17686 aaaccaacaacaacaacttatttcacaacaacatattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 17587  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
     |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  17586 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 17519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 7118 - 6962
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaacca-- 148  Q
    |||| |||||| |||||||||||||||||| | | |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |      
T  7118 caccaacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaacaaca 7019  T
Q  149 -ttgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
     ||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  7018 attgatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 6962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 1092 - 939
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||  | |||||  | ||||||||||||| |||    
T  1092 caccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaacccaagccatgaattatcatcaacaacatgacatatcaacaacaacaacaatt 993  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| || ||||||| ||| |||||||||||||||||||||    
T  992 gatcatgaaacttatcacaaatcatcaataacaatgcataattcaccaattgag 939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 109736 - 109582
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  109736 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaatcccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 109637  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
     |||||||||||||| ||||| ||||||||||||||   ||||||||||||||||    
T  109636 aattgatcatgaaacttatcacaattcatcaacaacttagcataattcaccaatt 109582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 118237 - 118081
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  118237 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaccccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 118138  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 203  Q
     | |||||||||||| ||||| ||||||||||||||   ||||||||||||||||||    
T  118137 aactgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattga 118081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 255084 - 254931
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||  | |||||  | ||||||||||| | |||    
T  255084 caccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaatt 254985  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  254984 gatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 254931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 261690 - 261537
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||  | |||||  | ||||||||||| | |||    
T  261690 caccaacaacatctcatttctcaacaacaaaccatgaatcatgcaaactcaagccatgaattatcatcaacaacatgacatatcaacaacaacatcaatt 261591  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||    
T  261590 gatcatgaaacttatcacaattcatcaacaacaatgcataattcaccaattgag 261537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 84; Significance: 4e-40; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 14854 - 15004
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcat-gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| |   |||| ||||||||||||||||||||||||||||||  | |||||||||||   |||||||| |||    
T  14854 caccaacaacatctcatttctcaacaacaaaccgagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaaca---acaacaacaatt 14950  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  14951 gatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 15004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 14194 - 14288
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcat-gaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||| |||||| |||||||||||||||||| |   |||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  14194 caccaacaacatctcatttctcaacaacaaaccgagaattatgcaaacccaagccatgaattatcatcaacaacatgactaaacaacaacaacaa 14288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 59 - 204
Target Start/End: Original strand, 7556 - 7699
Alignment:
Q  59 aacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatga 158  Q
    |||| |||||||||||||||| | |  |||||||||||||||||||||||||||||||||||  | |||||| ||||||||||||| | |||||||||||    
T  7556 aacatctcatttctcaacaaccaac--gaatcatgcaaacccaagccatgaattatcatcaacaacatgacttaacaacaacaacatcaattgatcatga 7653  T
Q  159 aacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||| ||||| |||| ||||||||| |||||||||||||||||||||    
T  7654 aacttatcataatttatcaacaacaatgcataattcaccaattgag 7699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 201
Target Start/End: Original strand, 85321 - 85459
Alignment:
Q  64 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 162  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||  | |||||| | ||||||||||| | ||||||||||||||     
T  85321 ctcatttctcaacaacaaatcatgaatcatgcaaacccaaaccatgaattatcatcaacaacatgacttagcaacaacaacatcaattgatcatgaaact 85420  T
Q  163 tatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||| |||||||||||||||  ||||||||||||||||    
T  85421 tatcacaattcatcaacaacctagcataattcaccaatt 85459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 212
Target Start/End: Original strand, 159275 - 159438
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| |||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||   | || ||| | ||||||||||| |    
T  159275 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccaaaaattatcatca---acatcacttagcaacaacaacatc 159371  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattc-accaattgagtataattt 212  Q
     |||||||||||||| ||||| |||||| || ||||   ||||||||| |||||||||| |||||||    
T  159372 aattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcataattt 159438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 846 - 693
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||  | |||||| | ||||||||||| | |||    
T  846 caccaacaacatctcatttctcaacaacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatcaatt 747  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| ||||||||||||||   |||||||||||||| ||||    
T  746 gatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgag 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 64 - 204
Target Start/End: Original strand, 38287 - 38428
Alignment:
Q  64 ctcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 162  Q
    |||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||  | |||||||||||||||||||  | ||||||||||||||     
T  38287 ctcatttctcaacaacaaaccatgaatcatgcaaacccaagttatgaattatcatcaacaacatgactaaacaacaacaacgtcaattgatcatgaaact 38386  T
Q  163 tatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  38387 tatcacaattcatcaacaacaatgcataattcgccaattgag 38428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 82; Significance: 7e-39; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 55553 - 55721
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||||| | ||||||||| ||||  |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  55553 aaaccaacaacaacaacttattttacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 55652  T
Q  146 ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  55653 ctattgatcatgaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 55721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 94061 - 93973
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaa 120  Q
    |||||||||||||||||  |||| |||||| ||||||||||| |||| |||||||||| |||   ||||||  ||||||||||||||||    
T  94061 tcaacccattttacaaagtcaccaacaacatctcatttctcaccaacaaatcatgaattatgttcacccaaatcatgaattatcatcaa 93973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 104887 - 104799
Alignment:
Q  57 acaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 144  Q
    |||||||||||||| ||| || |||| ||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | |||||||||||    
T  104887 acaacaactcatttatcatcatcaattcatgaattatgaatacccaagccatgaatcatcaacaacaatatcacttagcaacaacaaca 104799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 253271 - 253106
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  ||||||||| ||| || |||||||||||||||||||||||| ||||||||||||||  | |||||| ||||| |    
T  253271 atttcacaaaaccaccaacaacaatccatttctcatcaagaaatcatgaatcatgcaaacccaagccttgaattatcatcaacaacatgacttaacaaaa 253172  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||| |||||||||||||| ||||| |||||| ||||||| | |||| ||||||||||||||    
T  253171 acaacaacaattgatcatgaaacttatcacaattcaacaacaacaaagcatgattcaccaattgag 253106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 204
Target Start/End: Original strand, 9903 - 10067
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| ||| |||| |||||| |||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||    
T  9903 ttttaccaaaacaccaacaacatctcatttctccacaacaaatcatgaatcatgcaaacccaagccatgaataatcatcaacaacatgacatatcaacaa 10002  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||| | |||||||||||||| ||||| |||||| ||||||| | |||||||||||||||||||    
T  10003 caacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaccaattgag 10067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 204
Target Start/End: Complemental strand, 15761 - 15588
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||| | |||||||||||| || | |||||||||||| ||||||||||||||||| |||| |  | |||||||||    
T  15761 acccattttcaccaaaccaacaacaacaatttatttctcaacaaaaaattatgaatcatgcatacccaagccatgaattagcatctataacatgactaaa 15662  T
Q  134 caacaacaacaacca---ttgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||||| |   ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  15661 caacaacaacaacaacaattgatcatgaaacatatcacaattcatcaacaacaatgcataattcaccaattgag 15588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 6816 - 6658
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||| | | ||||||||    
T  6816 acaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaagatctattgatca 6717  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | |||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  6716 tcaaacttatcacaattcatcaacaaccatgcataattcaccaattgagcataatttac 6658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 8960 - 9117
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||  | |||||| | ||||||||||| |    
T  8960 aaaccaccaacaacatctcatttctcaacaacaaatcatgaatcaagcaaacccaagccatgaattatcatcaacaacatgacttagcaacaacaacatc 9059  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
     | ||||| |||||| ||||| || |||||||||||   |||||||||||||||||||    
T  9060 aagtgatcttgaaacttatcacaaatcatcaacaacatagcataattcaccaattgag 9117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 788 - 635
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||  | |||||| |  |||||||||| | |||    
T  788 caccaacaacatctcatttctcaacaacaaatcatgaatcatgccaacccaagccatgaattatcatcaacaacatgacttagtaacaacaacatcaatt 689  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| ||||||||||||||   |||||||||||||| ||||    
T  688 gatcatgaaacttatcacaattcatcaacaacatagcataattcaccaaatgag 635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 193770 - 193603
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaa 145  Q
    |||||| | ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| |||||||||||||     
T  193770 aaaccaacaacaacaacttatttcgcaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacat 193671  T
Q  146 ccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    | |||||||||||||||||||| || | ||||||||||||||||||||||||||||||| |||||||||    
T  193670 ctattgatcatgaaacatatcacaa-taatcaacaaccatgcataattcaccaattgagcataatttac 193603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 186799 - 186641
Alignment:
Q  57 acaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatc 154  Q
    ||||||||| ||||| |||||||||  | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| | |||||||    
T  186799 acaacaacttatttcacaacaacaaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatctattgatc 186700  T
Q  155 atgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    ||||||||||||| || | ||||||||||||||||||||||||||||||| |||||||||    
T  186699 atgaaacatatcacaa-taatcaacaaccatgcataattcaccaattgagcataatttac 186641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 58 - 201
Target Start/End: Original strand, 1300 - 1444
Alignment:
Q  58 caacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcat 156  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  | |||||  | ||||||||||| | |||||||||    
T  1300 caacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaatgatcatcaacaacatgacatatcaacaacaacatcaattgatcat 1399  T
Q  157 gaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||| ||||| |||||| ||||||| | ||||||||||||||||    
T  1400 gaaacttatcacaattcaacaacaacaaagcataattcaccaatt 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 11921 - 11771
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||| | |||||  |||||| | |||||| |||||||||||||||||||||||  | |||||| ||||||||||||||   |    
T  11921 caccaacaacatctcatttctccataacaaaatcatgagttatgcaa-cccaagccatgaattatcatcaacaacatgacttaacaacaacaacaa---t 11826  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||||| | ||| |||||||||||||| ||||||||||||| |||||||    
T  11825 tgatcatgaaacttttcacaattcatcaacaacaatgcataattcactaattgag 11771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 9789 - 9622
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  |  | ||| ||||||||||||| |    
T  9789 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacgtcacttaacaacaacaacatc 9690  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
     |||||||||||||| ||||| ||||||||||||||||||||||| |||| ||||||| |||||||||    
T  9689 tattgatcatgaaacttatcacaattcatcaacaaccatgcataagtcactaattgagcataatttac 9622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 94948 - 95115
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| ||||||||| | |||||||||||| |||||| |||||||||| |||| |  | || ||| | ||||||||||| |    
T  94948 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaaaccatgaattagcatccataacatcacttatcaacaacaacatc 95047  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
     |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||| |||||||||    
T  95048 tattgatcatgaaacttatcacaattcatcaacaaccatgcataattcactaattgagcataatttac 95115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 25002 - 24845
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| ||||||||| | |||||||||| | |||||||||| |||||| |||| |  | || ||| ||||||||||||| |    
T  25002 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgaatacccaagccaagaattaacatccataacatcacttaacaacaacaacatc 24903  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
     |||||||||||||| ||||| ||||||||||||||   |||||||||||||||||||    
T  24902 tattgatcatgaaacttatcacaattcatcaacaacatagcataattcaccaattgag 24845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 10248 - 10094
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||| | ||||||||| ||||| ||||||||| | |||||||||||| ||||||||||||||||| |||| |  | || ||| ||||||||||||| |    
T  10248 aaaccatcaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaagccatgaattagcatccataacatcacttaacaacaacaacatc 10149  T
Q  147 cattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||    
T  10148 cattgatcatgaaacttatcacaattcatcaacaaccaagcataattcgccaatt 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 28466 - 28573
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcatttctcaacaa-caatcatgaatcatgcaaacccaag 103  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||  |||||||||| ||| | |||||||    
T  28466 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccaccaacaacaactcatttctcaccaataaatcatgaattatgaacacccaag 28565  T
Q  104 ccatgaat 111  Q
    ||||||||    
T  28566 ccatgaat 28573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 21637 - 21687
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccacc 55  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21637 acatcatcaaaatcaaacttcttcattatcaacccattttacaaaaccacc 21687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 72; Significance: 6e-33; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 112812 - 112662
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccatt 150  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||   | |||||| |||||||||||||   |||    
T  112812 caccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgaattatcaaca---acatgacttaacaacaacaacataaatt 112716  T
Q  151 gatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| ||||| ||||||||||| ||   ||||||||||| |||||||    
T  112715 gatcatgaaacttatcacaattcatcaaccacatagcataattcactaattgag 112662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 109556 - 109698
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| |||| ||| |||||| ||||||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||  | || ||| | ||||||    
T  109556 ttttaccaaactaccaacaacatctcatttctcatcaacaaatcatgaatcgtgcatacccaagccatgaattatcatcaacaacatcacttagcaacaa 109655  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    ||||| | | |||||||||| | ||||| |||||| |||||||    
T  109656 caacatcaactgatcatgaatcttatcacaattcaacaacaac 109698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 103211 - 103123
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaa 120  Q
    |||||||||||||||||  |||| |||||||||||||| ||| |||||| |||||||| ||||| |||||| |||||||||||||||||    
T  103211 tcaacccattttacaaagtcaccaacaacaactcatttatcaccaacaattcatgaattatgcacacccaaaccatgaattatcatcaa 103123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 204
Target Start/End: Original strand, 146561 - 146731
Alignment:
Q  36 acccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaa 133  Q
    ||||||||| || |||||| | ||||||||| ||||| ||| ||||| | |||||||||||| ||||||||||||||||| |||  |  | || ||| ||    
T  146561 acccattttcaccaaaccaacaacaacaacttatttcacaaaaacaaattatgaatcatgcatacccaagccatgaattaacatgcataacatcacttaa 146660  T
Q  134 caacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    ||||||||||| | |||||||||||||| ||||| |||||||||||||||  |||||||||||||||||||    
T  146661 caacaacaacatctattgatcatgaaacttatcacaattcatcaacaacctagcataattcaccaattgag 146731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 1332 - 1485
Alignment:
Q  27 tcattatcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacat 124  Q
    |||| ||||||||||||| || ||| |||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||  |     
T  1332 tcataatcaacccattttcaccaaaacaccaacaacatctcatttctcaacaacaaatcatgaatcatgcaaacccaagccatgatttatcatcaacaac 1431  T
Q  125 atgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaa 178  Q
    |||||  | ||||| |||||   |||||||||||||| ||||| ||||||||||    
T  1432 atgacatagcaacagcaacatttattgatcatgaaacttatcacaattcatcaa 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 204
Target Start/End: Original strand, 3 - 151
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    |||||||  |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||  | |||||  | ||||||||||| | ||||||||    
T  3 acaacaatccatttctcaacaacaaataatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaacaacatcaattgatca 102  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||| ||||| ||||||||||| ||   ||||||||||| |||||||    
T  103 tgaaacttatcacaattcatcaaccacgtagcataattcacgaattgag 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 3492 - 3589
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaaca 144  Q
    |||||||| ||||||   |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||  | |||||  | |||||||||||    
T  3492 aaaccaccaacaacattccatttctcaacaacaaataatgaaacatgcaaacccaagccatgaattatcatcaacaagatgacatagcaacaacaaca 3589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 201
Target Start/End: Original strand, 4906 - 5068
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||  ||||||||| || ||| |||||||| ||| | | ||||||||||||||||||||||  | |||||| | |||||    
T  4906 atttcacaaaaccaccaacaacaatccatttctcatcagcaaatcatgaattatgaacaaccaagccatgaattatcatcaacaacatgacttagcaaca 5005  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||||| | |||||||||||||| ||||| |||||| ||||||| |  |||||||||||||||    
T  5006 acaacatcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattcaccaatt 5068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 52 - 201
Target Start/End: Complemental strand, 11837 - 11688
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattg 151  Q
    |||| |||||| |||||||||| |||  |||||||||| ||||||||||||| ||||||||||||||||  | |||||  | |||||||||||   ||||    
T  11837 caccaacaacatctcatttctccacacaaatcatgaattatgcaaacccaagtcatgaattatcatcaacaacatgacatatcaacaacaacataaattg 11738  T
Q  152 atcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    ||||||||||  |||| |||||| ||||||| | ||||||||||||||||    
T  11737 atcatgaaactgatcacaattcaacaacaacaaagcataattcaccaatt 11688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 48124 - 48286
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||| | |||||  |||||||| |||||| |||||||||||||||||||||||  | ||| || |||||||| || ||| ||    
T  48124 caccaacaacatctcatttctccataacaaaatcatgaattatgcaa-cccaagccatgaattatcatcaacaacatggcttaacaacaataataacaat 48222  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataattta 213  Q
    |||||||||||| | ||| |||||||||||||| |  |||||||||||||||||| ||| ||||    
T  48223 tgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttta 48286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 61572 - 61734
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaa--tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccat 149  Q
    |||| |||||| |||||||||| | |||||  |||||||| |||||| |||||||||||||||||||||||  | ||| || |||||||| || ||| ||    
T  61572 caccaacaacatctcatttctccataacaaaatcatgaattatgcaa-cccaagccatgaattatcatcaacaacatggcttaacaacaataataacaat 61670  T
Q  150 tgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataattta 213  Q
    |||||||||||| | ||| |||||||||||||| |  |||||||||||||||||| ||| ||||    
T  61671 tgatcatgaaacttttcacaattcatcaacaacaaaacataattcaccaattgagcatatttta 61734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 130486 - 130589
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccattttacaaaaccaccgacaacaactcattt-ctcaacaacaatcatgaatcatgcaaacccaag 103  Q
    ||||||||||| |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||   ||| | |||||||    
T  130486 acatcatcaaaatcaaacttcttctttattaacccattttacaaaaccaccaacaacaactcattttctcaacaacaatcatgatatatgaacacccaag 130585  T
Q  104 ccat 107  Q
    ||||    
T  130586 ccat 130589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 79521 - 79647
Alignment:
Q  57 acaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    |||||||||||||||||| || |||| ||||||| ||| | ||||||||||||||| |||| |||  |||| ||| | ||||||||||| | ||||| ||    
T  79521 acaacaactcatttctcatcaccaattcatgaattatgaatacccaagccatgaatcatcaacaataatatcacttagcaacaacaacatcaattgaaca 79620  T
Q  156 tgaaacatatcaaaattcatcaacaac 182  Q
    ||   || |||| |||||| |||||||    
T  79621 tggttcacatcataattcaacaacaac 79647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 89655 - 89586
Alignment:
Q  135 aacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgag 204  Q
    |||||||||| | |||| ||||||||| ||||| |||| | ||||||| | |||||||||||||||||||    
T  89655 aacaacaacatcaattgttcatgaaacttatcacaatttaacaacaacaaagcataattcaccaattgag 89586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 214
Target Start/End: Complemental strand, 301 - 143
Alignment:
Q  57 acaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatca 155  Q
    ||||||||| ||||| |||||| || | |||||||||||| || |||||||||||||| |||| |  | || ||| |||||||||||||   ||||||||    
T  301 acaacaacttatttcacaacaataaattatgaatcatgcatactcaagccatgaattagcatccataacatcacttaacaacaacaacatttattgatca 202  T
Q  156 tgaaacatatcaaaattcatcaacaaccatgcataattcaccaattgagtataatttac 214  Q
    |||||| ||||| ||||||||||  |  ||||||||||||||||||||| |||||||||    
T  201 tgaaacttatcataattcatcaattattatgcataattcaccaattgagcataatttac 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 34008 - 33854
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| |||| ||| |||||| |||||||||||||||||| |||| ||||||||| |||||||||||||||||| |||||  | || ||| | ||||||    
T  34008 ttttaccaaactaccaacaacatctcatttctcaacaacaaatcat-aatcatgcatacccaagccatgaattattatcaacaacatcacttagcaacaa 33910  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 195  Q
    ||||| | |||||||||||| | ||||| |||||| |||||||   ||||||||||    
T  33909 caacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattca 33854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 201
Target Start/End: Original strand, 33668 - 33789
Alignment:
Q  80 aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    |||||||||| ||| | |||| |||||||||| |||| |||  |||| ||| | ||||||||||| | |||||||||||||| |||||||||||||||||    
T  33668 aatcatgaattatgaacaccctagccatgaatcatcaacaacaatatcacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaac 33767  T
Q  180 aaccatgcataattcaccaatt 201  Q
    |||   ||||||||||||||||    
T  33768 aacatagcataattcaccaatt 33789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 24471 - 24372
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||| |||||||  |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||  | |||||  | |||||||||||||    
T  24471 aaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaacccaagacatgaattatcatcaacaacatgacatagcaacaacaacaac 24372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 179
Target Start/End: Original strand, 31010 - 31149
Alignment:
Q  41 ttttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaa 139  Q
    |||||| ||| |||| |||||| |||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| |  | ||  | || |||    
T  31010 ttttaccaaaacaccaacaacatctcatttctcaacaacaagtcatgaatcatgcatacccaagccataaattatcatcaaaaacctcacatatcagcaa 31109  T
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaac 179  Q
    ||||| | ||| |||||||||| ||||| |||||| ||||    
T  31110 caacatcaattaatcatgaaacttatcacaattcaacaac 31149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 195
Target Start/End: Original strand, 70676 - 70734
Alignment:
Q  137 caacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 195  Q
    |||||||| | |||||||||||||| ||||| |||||| ||||||| | ||||||||||    
T  70676 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattca 70734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 97487 - 97403
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||||||||||   ||||||||||| |||| | || | |||||||| | ||| ||||||||| ||||||| ||||    
T  97487 tcaacccattttacaaaaccaataacaacaactcaattcttatcatcaaatcatgatttatgaaaacccaaggcatgaatcatca 97403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 48 - 159
Target Start/End: Original strand, 1889 - 2001
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaac 146  Q
    |||||||  |||||| |||||||||||||||||| |||||||||||||| || ||||||| ||||||||||||   | |||||| | ||||||||||| |    
T  1889 aaaccactaacaacatctcatttctcaacaacaaatcatgaatcatgcatactcaagccaagaattatcatcatcaacatgacttagcaacaacaacatc 1988  T
Q  147 cattgatcatgaa 159  Q
     ||||||||||||    
T  1989 aattgatcatgaa 2001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 201
Target Start/End: Complemental strand, 77129 - 76967
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaaca 138  Q
    |||| ||||||||||| |||||||||||||||||| |||| |||||||||| ||| | ||||||||||||||| ||||  ||  |||| ||| | |||||    
T  77129 atttcacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatcaataacaatatcacttagcaaca 77030  T
Q  139 acaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    |||||| | ||||| |||||| |  | || |||||| |||||||   |||||||||| |||||    
T  77029 acaacatcaattgaacatgaatctcaccacaattcaacaacaacatagcataattcaacaatt 76967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 44087 - 43975
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | |||||||||||||||||| || | |||||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  44087 tcaacccattttacaaaaccaacaacaacaactcatttctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 43988  T
Q  132 aacaacaacaaca 144  Q
    | |||||||||||    
T  43987 agcaacaacaaca 43975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 158
Target Start/End: Original strand, 270 - 393
Alignment:
Q  36 acccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaac 134  Q
    ||||| |||||||||||||| |||||||||||||||||| |||| |||||||||| |||   ||||||| ||||||| |||| |||| | || ||| | |    
T  270 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgagcacccaaggcatgaataatcaacaaaaacatcacttagc 369  T
Q  135 aacaacaacaaccattgatcatga 158  Q
    |||||||||| | ||||| |||||    
T  370 aacaacaacatcaattgaacatga 393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 4351 - 4414
Alignment:
Q  140 caacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaattga 203  Q
    ||||||| ||||||||| |||| ||||| |||||||||||||| ||||||||||||||||||||    
T  4351 caacaacaattgatcataaaacttatcacaattcatcaacaacaatgcataattcaccaattga 4414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 4284 - 4353
Alignment:
Q  52 caccgacaacaactcatttctcaacaacaatc-atgaatcatgcaaacccaagccatgaattatcatcaa 120  Q
    |||| |||||| |||||||||||||||||| | | |||| |||||||||||| |||||||||||||||||    
T  4284 caccaacaacatctcatttctcaacaacaaaccaagaattatgcaaacccaaaccatgaattatcatcaa 4353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 7807 - 7878
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatc 118  Q
    |||| ||| |||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  7807 aaactaccaacaacatctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattaacatc 7878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 3308 - 3419
Alignment:
Q  64 ctcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgactaaacaacaacaacaaccattgatcatgaaaca 162  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| |  | || ||| | ||||| ||||| | |||||||||||| |     
T  3308 ctcatttctcaacaacaaatcatgaatcatgcatacccaagccatgaattaacatccacaacatcacttagcaacatcaacatcaattgatcatgaatct 3407  T
Q  163 tatcaaaattca 174  Q
    ||||| ||||||    
T  3408 tatcacaattca 3419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 6622 - 6708
Alignment:
Q  36 acccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaa 121  Q
    ||||| |||||||||||||| |||||||||||||||||| |||| |||||||||| |||   ||||||||||||||| |||| ||||    
T  6622 acccagtttacaaaaccaccaacaacaactcatttctcatcaacaaatcatgaattatgaccacccaagccatgaatcatcaacaaa 6708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 182
Target Start/End: Original strand, 69415 - 69565
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||||||||||| | |||||| |||| |||||| || ||| |||||| | ||| | ||||||||||||||| |||| |||  |||| |||     
T  69415 tcaacccattttacaaaaccaacaacaacacctcaattctcatcatcaaatcatgatttatgaacacccaagccatgaatcatcaacaacaatatcactt 69514  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaac 182  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||    
T  69515 agcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaac 69565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 195
Target Start/End: Original strand, 2483 - 2646
Alignment:
Q  33 tcaacccattttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgacta 131  Q
    ||||||||||||| ||||||| | ||||||| |||||||||| || | |||||||| | ||| | |||||| |||||||| |||| |||  |||| |||     
T  2483 tcaacccattttagaaaaccaacaacaacaagtcatttctcatcatcaaatcatgatttatgaacacccaaaccatgaatcatcaacaacaatatcactt 2582  T
Q  132 aacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattca 195  Q
    | ||||||||||| | ||||| |||||| |  |||| |||||| |||||||   ||||||||||    
T  2583 agcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcataattca 2646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 13048 - 12990
Alignment:
Q  8 tcatcaaattcaaacttcttcattatcaacccatttt-acaaaaccaccgacaacaact 65  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  13048 tcatcaaaatcaaacttcttcattatcaacccattttcacaaaaccatcaacaacaact 12990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 35444 - 35520
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatca 116  Q
    |||||||||||||||| ||| |||||||||||||| |||||| |||||||| ||| | ||||||||||||||| ||||    
T  35444 attttacaaaaccaccaaca-caactcatttctcatcaacaaatcatgaattatgaatacccaagccatgaatcatca 35520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1734 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1734
Description:

Target: scaffold1734; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 1364 - 1422
Alignment:
Q  40 attttacaaaaccaccgacaacaactcatttctcaacaac-aatcatgaatcatgcaaa 97  Q
    |||| ||||||||||| |||||||  |||||||||||||| ||||||||||||||||||    
T  1364 atttcacaaaaccaccaacaacaatccatttctcaacaacaaatcatgaatcatgcaaa 1422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 12694 - 12734
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaacccatttta 45  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  12694 acatcatcaaaatcaaacttcttcactatcaacccatttta 12734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 22786 - 22715
Alignment:
Q  48 aaaccaccgacaacaactcatttctcaacaacaa-tcatgaatcatgcaaacccaagccatgaattatcatc 118  Q
    |||||| | ||||||||| ||||| ||||||||| | |||||||||||| |||||| |||||||||| ||||    
T  22786 aaaccaacaacaacaacttatttcacaacaacaaattatgaatcatgcatacccaaaccatgaattagcatc 22715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 201
Target Start/End: Complemental strand, 2607 - 2436
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaat-catgaatcatgcaaacccaagccatgaattatcatcaaacatatgac 129  Q
    ||||||||||||| || |||||| | ||||||||| |||||||| || |||  ||||||| ||| |  |||||||||||||| ||||||||  | || ||    
T  2607 atcaacccattttcaccaaaccaacaacaacaacttatttctcatcatcaaaacatgaattatgaacgcccaagccatgaatcatcatcaacaacatcac 2508  T
Q  130 taaacaacaacaacaaccattgatcatgaaacatatcaaaattcatcaacaaccatgcataattcaccaatt 201  Q
    | |  |||||||||| | ||||| |||||  | ||||| |||||| |||||||   |||||||||| |||||    
T  2507 ttaggaacaacaacatcaattgaacatgagtcttatcataattcaacaacaacatagcataattcatcaatt 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 3427 - 3392
Alignment:
Q  5 acatcatcaaattcaaacttcttcattatcaaccca 40  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3427 acatcatcaaaatcaaacttcttcattatcaaccca 3392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 107967 - 108080
Alignment:
Q  32 atcaacccatttt-acaaaaccaccgacaacaactcatttctcaacaacaatcatgaatcatgcaaacccaagccatgaattatcatcaaacatatgact 130  Q
    ||||||||||||| | ||||||| | ||||||||| |||||||| ||| | |||||| | ||| | |||||||| |||||| |||| |||  ||||  ||    
T  107967 atcaacccatttttaaaaaaccaacaacaacaacttatttctcatcaaaattcatgatttatgaacacccaagctatgaatcatcaacaacaatatatct 108066  T
Q  131 aaacaacaacaaca 144  Q
     |||||||||||||    
T  108067 taacaacaacaaca 108080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 5875 - 5823
Alignment:
Q  36 acccattt-tacaaaaccaccgacaacaactcatttctcaacaacaatcatga 87  Q
    |||||||| |||||||| ||| |||||| ||||||||||| ||||||||||||    
T  5875 acccatttatacaaaacaaccaacaacatctcatttctcaccaacaatcatga 5823  T

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