View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2032_high_4 (Length: 242)
Name: NF2032_high_4
Description: NF2032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2032_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 46496322 - 46496104
Alignment:
| Q |
18 |
aaataagggaatgatgctttttgtcttagaatcaaaagcctgaagggaaaacaaaataaacaagcaaaaggcaagttagcgtcgttacaagtgataaagg |
117 |
Q |
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| T |
46496322 |
aaataagggaatgatgctttttgtcttagaatcaaaagcctgaagggaaaacaaaataaacaagcaaaaggcaagttagcgtcgatacaagtgataaagg |
46496223 |
T |
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| Q |
118 |
ttttttatacattgggatagtgtaggcagatcattgattcataattggaatgagaggtctctatatatataataattactaataaaagagaatgttattt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
46496222 |
ttttttatacattgggatagtgtaggcagatcattgattcataattggaatgagaggtctctatatatataataattactaataaaagagaatgctattt |
46496123 |
T |
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| Q |
218 |
caacaacatttttcttaaa |
236 |
Q |
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||||||||||||||||||| |
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| T |
46496122 |
caacaacatttttcttaaa |
46496104 |
T |
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