View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2032_low_1 (Length: 446)
Name: NF2032_low_1
Description: NF2032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2032_low_1 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 410; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 33 - 446
Target Start/End: Complemental strand, 48170916 - 48170503
Alignment:
| Q |
33 |
gtgacccttgtttgtattatattatttcttattactgttgtcacaattacatataattatcatacaggaaacaaatcttatatattgtctgtcctattga |
132 |
Q |
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| T |
48170916 |
gtgacccttgtttgtattatattatttcttattactgttgtcacaattacatataattatcatacaggaaacaaatcttatatattgtctgtcctattga |
48170817 |
T |
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| Q |
133 |
tcagaaactcaaatagctattttattctagcaattcaactagttagatagatatacaacaagccattgaaaatttgtttgagtagttatgatagattata |
232 |
Q |
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| T |
48170816 |
tcagaaactcaaatagctattttattctagcaattcaactagttagatagatatacaacaagccattgaaaatttgtttgagtagttatgatagattata |
48170717 |
T |
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| Q |
233 |
tcggtttattttatccaatatgataagtttgtttagcagcatcactataaagaaggctaatgcaagatcattggctcaagtaattttctcatgttcactt |
332 |
Q |
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| T |
48170716 |
tcggtttattttatccaatatgataagtttgtttagcagcatcactataaagaaggctaatgcaagatcattggctcaagtaattttctcatgttcactt |
48170617 |
T |
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| Q |
333 |
ctctaacttgctggaaagatatgaagaaataagtagcatgagacgtgtatcttaaggattatttcactgtggaggtaattttaatgatgtgattatccat |
432 |
Q |
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| T |
48170616 |
ctctaacttgctggaaagatatgaagaaataagtagcatgagacgtgtatcttaaggattatttcactgtggaggtaattttaatgatgtgaatatccat |
48170517 |
T |
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| Q |
433 |
ctggactcttctgc |
446 |
Q |
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| T |
48170516 |
ctggactcttctgc |
48170503 |
T |
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