View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20333_low_1 (Length: 828)

Name: NF20333_low_1
Description: NF20333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20333_low_1
NF20333_low_1
[»] chr4 (16 HSPs)
chr4 (313-811)||(38412159-38412652)
chr4 (7-306)||(38411744-38412043)
chr4 (120-302)||(55606235-55606416)
chr4 (124-302)||(28146982-28147159)
chr4 (121-302)||(25967999-25968179)
chr4 (625-752)||(38422420-38422550)
chr4 (129-302)||(13198078-13198250)
chr4 (220-302)||(11440588-11440670)
chr4 (71-197)||(11440668-11440797)
chr4 (409-481)||(38407541-38407613)
chr4 (311-381)||(25967801-25967872)
chr4 (519-611)||(38422270-38422357)
chr4 (500-558)||(38407632-38407688)
chr4 (311-381)||(28146787-28146858)
chr4 (120-163)||(29866160-29866203)
chr4 (167-267)||(46308387-46308487)
[»] chr7 (11 HSPs)
chr7 (121-307)||(25635893-25636079)
chr7 (116-301)||(39653441-39653626)
chr7 (117-302)||(47363689-47363874)
chr7 (194-302)||(10493472-10493579)
chr7 (138-197)||(10493376-10493435)
chr7 (116-302)||(33049115-33049311)
chr7 (121-206)||(7493053-7493138)
chr7 (311-378)||(47363963-47364030)
chr7 (209-274)||(45435419-45435484)
chr7 (138-231)||(31742958-31743052)
chr7 (122-220)||(45435503-45435603)
[»] chr2 (9 HSPs)
chr2 (120-302)||(37794640-37794821)
chr2 (121-302)||(17988977-17989157)
chr2 (42-239)||(5430210-5430407)
chr2 (122-212)||(19263821-19263911)
chr2 (124-196)||(35016316-35016388)
chr2 (207-292)||(35016457-35016541)
chr2 (243-301)||(5428641-5428699)
chr2 (249-301)||(19263772-19263824)
chr2 (120-162)||(20929880-20929922)
[»] chr3 (4 HSPs)
chr3 (121-302)||(11783396-11783577)
chr3 (141-302)||(7299106-7299267)
chr3 (313-382)||(7298925-7298994)
chr3 (138-175)||(53527191-53527228)
[»] chr1 (12 HSPs)
chr1 (121-275)||(12990541-12990694)
chr1 (115-301)||(34664779-34664964)
chr1 (121-307)||(32617560-32617744)
chr1 (121-302)||(9457617-9457794)
chr1 (121-302)||(9461714-9461891)
chr1 (127-302)||(14081707-14081872)
chr1 (311-382)||(32617859-32617931)
chr1 (311-381)||(9457446-9457517)
chr1 (311-381)||(9461543-9461614)
chr1 (311-380)||(12990144-12990214)
chr1 (223-302)||(24699887-24699966)
chr1 (119-156)||(963102-963139)
[»] chr8 (8 HSPs)
chr8 (124-302)||(23489962-23490139)
chr8 (121-210)||(13402173-13402262)
chr8 (116-197)||(13396888-13396969)
chr8 (124-302)||(7154249-7154439)
chr8 (128-179)||(14370805-14370856)
chr8 (244-302)||(14867365-14867423)
chr8 (324-381)||(14867560-14867618)
chr8 (314-379)||(23490243-23490309)
[»] chr5 (11 HSPs)
chr5 (127-300)||(41283493-41283664)
chr5 (128-302)||(39426087-39426260)
chr5 (128-302)||(22927061-22927236)
chr5 (121-302)||(36491494-36491666)
chr5 (128-302)||(13424636-13424806)
chr5 (315-381)||(13424887-13424954)
chr5 (311-381)||(19967312-19967383)
chr5 (243-302)||(16341523-16341584)
chr5 (38-160)||(19967627-19967749)
chr5 (120-163)||(37247652-37247695)
chr5 (311-381)||(41283294-41283365)
[»] chr6 (7 HSPs)
chr6 (133-302)||(9177588-9177760)
chr6 (122-241)||(26660607-26660726)
chr6 (122-241)||(26766578-26766697)
chr6 (220-302)||(32296363-32296445)
chr6 (209-285)||(10117185-10117259)
chr6 (311-381)||(8169240-8169310)
chr6 (116-163)||(9771928-9771975)
[»] scaffold0989 (1 HSPs)
scaffold0989 (333-379)||(2119-2165)


Alignment Details
Target: chr4 (Bit Score: 406; Significance: 0; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 313 - 811
Target Start/End: Original strand, 38412159 - 38412652
Alignment:
Q  313 cggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaacctctaagactagtatcaacgatatagtagagca 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38412159 cggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaacctctaagactagtatcaacgatatagtagagca 38412258  T
Q  413 aactaaatgtgattcacaaatcagcattaatctttcggtggatatcgccattaaaaaatatctttcaataannnnnnnnnnnnnnnnaatcttgaagaat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||                |||||||||| ||    
T  38412259 aactaaatgtgattcacaaatcagcattaatctttcggtggatatcgccattaaaaaagatctttcaataattttatttttttt---aatcttgaagcat 38412355  T
Q  513 taatcatttcaaacaaaaatgtttgcaatgaacactcacttgggacaatgttgtattgagtaagatctactaatgtcaatggttggtatgattgtggata 612  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  38412356 taatc-tttcaaacaaaaatgtttgcaatgaacactcacttgg-acaatgttgtcttgagtaagatctactaatgtcaatggttggaatgattgtagata 38412453  T
Q  613 ttggttggttaatatgataattgtcatgtgttttatatcacataatggatattttgttgcttcacataacaaatgttaaactctttcaatggaaaatatc 712  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38412454 ttggttggttaatatgataattgtcatgtgttttatatcacataatggatattttgttgcttcacataacaaatgttaaactctttcaatggaaaatatc 38412553  T
Q  713 attttcaagtttgttatatatcaagaattgtcctcgttgttacagtctagtagttttgtatgaagacattttatatcgtgtttccaccatatggccatt 811  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38412554 attttcaagtttgtcatatatcaagaattgtcctcgttgttacagtctagtagttttgtatgaagacattttatatcgtgtttccaccatatggccatt 38412652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 7 - 306
Target Start/End: Original strand, 38411744 - 38412043
Alignment:
Q  7 acatcatcacaaaaacatttttagcagccgaaaggttttaaacaacggtcgcggtcaaggtccaggtcgtgtatatgatttcaccatttcggccgttaca 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||    
T  38411744 acatcatcacaaaaatatttttagcagccgaaaggttttaaacaacggtcgcgttcaaggtccaggtcatgtatatgatttcaccatttcggctgttaca 38411843  T
Q  107 tatattgtattatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagat 206  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38411844 gatattgtattatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaacaatgataggaatgtaaataacttaacctagagat 38411943  T
Q  207 agatttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaagata 306  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38411944 agatttggagttctaaactagataaggaaataacattatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaagata 38412043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 120 - 302
Target Start/End: Original strand, 55606235 - 55606416
Alignment:
Q  120 agattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttc 219  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||| ||||||| ||||||| |||||    
T  55606235 agattacggttgtcgcattgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactagagaaagatttggagttc 55606334  T
Q  220 taaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    ||||||| |||||||||||||  |||||||||||| ||||| |||||| ||||||||| |||||||||||| | |||||||||    
T  55606335 taaactatataaggaaataac-ttatgtaatttatgatcaaatatgtactaaaaatataattttcatctatatcaattgaaaa 55606416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 124 - 302
Target Start/End: Complemental strand, 28147159 - 28146982
Alignment:
Q  124 tgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaa 223  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||  ||  |||||||||||| |||| || ||||||| | |||||||    
T  28147159 tgcggttgtcgcggtgtgaattaatcacaacattgcacaactcttaaataatattatcaacttaaataacttaaactagggaaagatttggaattctaaa 28147060  T
Q  224 ctagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
     |||||||||| |||||  |||||||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||    
T  28147059 ttagataaggagataact-tatgtaatttatgatcaaatatgtactaaaaatatgattttcatctatctcaattgaaaa 28146982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 121 - 302
Target Start/End: Complemental strand, 25968179 - 25967999
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 220  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||  |  || ||||||||| ||||||| |||| ||| |||||    
T  25968179 gattgcggttgtcgcggtgtgaattaatcacaacattgcacaactcttaaataatgatagtcacttacataacttaaactagagaaagatctgacgttct 25968080  T
Q  221 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||||||||||| | |||||  |||||||||||| ||||| ||||||  |||||||||||| |||||||| | |||||||||    
T  25968079 aaactagataagaagataac-ttatgtaatttattatcaaatatgtaccaaaaatatgattatcatctatatcaattgaaaa 25967999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 625 - 752
Target Start/End: Original strand, 38422420 - 38422550
Alignment:
Q  625 tatgataattgtcatgtgttttatatcacataatggatattttgttgcttcacataacaaatgtt-aaactctttcaatggaaaatatcattttcaagtt 723  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||| | ||| |||||||||||||||    
T  38422420 tatgataattgtcatgtgttttatttgacataatggatattttgttgcttcacatgacaaatgttaaaactctttcaaggtaaagtatcattttcaagtt 38422519  T
Q  724 tgt--tatatatcaagaattgtcctcgttgt 752  Q
    |||  |||||||||||||||||||| |||||    
T  38422520 tgttatatatatcaagaattgtccttgttgt 38422550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 129 - 302
Target Start/End: Original strand, 13198078 - 13198250
Alignment:
Q  129 ttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactaga 228  Q
    |||||||| |||||||||||||||||||||||||||| ||||| |||||| | ||  |  ||||||||| ||||| | ||||||| ||||||||| ||||    
T  13198078 ttgtcgcggtgtgaattaatcacaacattgcacaactcttaaacaatgatcgtaactttgataacttaaactagacaaagatttggagttctaaattaga 13198177  T
Q  229 taaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||||| |||||  |||||||||||| ||||| |||| | ||| |||||||||||||| ||||| |||||||||    
T  13198178 taaggagataac-ttatgtaatttatgatcaaatatgcactaagaatatgattttcatgtatctcaattgaaaa 13198250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 11440670 - 11440588
Alignment:
Q  220 taaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    ||||||| ||||| | |||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11440670 taaactatataagaagataacattatgtaatttatgatcaaatatgtactaaaaatatgattttcatctatcttaattgaaaa 11440588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 11440797 - 11440668
Alignment:
Q  71 ggtcgtgtatatgatttcaccatttcggccgttacatatattgtattatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaactttta- 169  Q
    ||||||| |||||||||||| |||||||| |||||  || |||  |||| |||||  ||||||||| |||||||||||||||||||||  ||||| |||     
T  11440797 ggtcgtggatatgatttcacgatttcggctgttacgaatgttgcgttatggattgttgttgtcgcggtgtgaattaatcacaacattgttcaactcttaa 11440698  T
Q  170 --aataatgataggaatgtaaataacttaa 197  Q
      ||||||||||| ||||||||||||||||    
T  11440697 ataataatgatagtaatgtaaataacttaa 11440668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 409 - 481
Target Start/End: Original strand, 38407541 - 38407613
Alignment:
Q  409 agcaaactaaatgtgattcacaaatcagcattaatctttcggtggatatcgccattaaaaaatatctttcaat 481  Q
    |||||||  |||||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||||||    
T  38407541 agcaaacccaatgtgattcacaaattagcattaatctttctgtggatattgccattaaaaaaaatctttcaat 38407613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 25967872 - 25967801
Alignment:
Q  311 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 381  Q
    |||||||||||| ||||||||||| |||||||||| ||||| |||||||||| ||||||| |||||||||||    
T  25967872 aacggtaacgtccgctacctatacctttttgtcgcagccttattctcggtaacggaccatattttaaaacct 25967801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 519 - 611
Target Start/End: Original strand, 38422270 - 38422357
Alignment:
Q  519 tttcaaacaaaaatgtttgcaatgaacactcacttgggacaatgttgtattgagtaagatctactaatgtcaatggttggtatgattgtggat 611  Q
    ||||||||| |||||||| ||| ||||  ||||||| ||||||||||| || |||||||||| |||||   ||||||||||||||||||||||    
T  38422270 tttcaaacagaaatgtttacaaggaac--tcacttgagacaatgttgtcttcagtaagatctgctaat---aatggttggtatgattgtggat 38422357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 500 - 558
Target Start/End: Original strand, 38407632 - 38407688
Alignment:
Q  500 aatcttgaagaattaatcatttcaaacaaaaatgtttgcaatgaacactcacttgggac 558  Q
    |||||||||| ||||||| |||||||||||||||||| ||||||  |||||||||||||    
T  38407632 aatcttgaagcattaatcttttcaaacaaaaatgtttacaatga--actcacttgggac 38407688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 28146858 - 28146787
Alignment:
Q  311 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 381  Q
    |||||||| ||| ||||||||||| ||||||| || ||||||||||| ||||  |||| |||||||||||||    
T  28146858 aacggtaatgtccgctacctatacctttttgttgcggcctttttctccgtaacagaccgttttttaaaacct 28146787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 29866203 - 29866160
Alignment:
Q  120 agattgcggttgtcgcgctgtgaattaatcacaacattgcacaa 163  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  29866203 agattgtggttgtcgtggtgtgaattaatcacaacattgcacaa 29866160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 46308387 - 46308487
Alignment:
Q  167 ttaaataatgataggaatgtaaataacttaacct-agagatagatttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatg 265  Q
    |||||||||||||| ||  ||||||||||||  | ||||| ||||||  ||||||||||||  |||||| |||||  |||||||||||| ||||| ||||    
T  46308387 ttaaataatgatagtaacttaaataacttaaattgagagagagatttagagttctaaactaactaaggagataac-ttatgtaatttatgatcaaatatg 46308485  T
Q  266 ta 267  Q
    ||    
T  46308486 ta 46308487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 3e-53; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 121 - 307
Target Start/End: Original strand, 25635893 - 25636079
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 220  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||||  |||||||||||||||| ||| ||||||||||| ||||||    
T  25635893 gattgcggttgttgcggtgtgaattaatcacaacattgcacacctcttaaataatgataataatgtaaataacttaaactaaagatagatttggagttct 25635992  T
Q  221 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaagatac 307  Q
    |||||||| ||||| |||||| |||||||||||| || || |||||| |||| ||||||||||||||||| | ||||||||| ||||    
T  25635993 aaactagacaaggagataacattatgtaatttatgattaaatatgtactaaagatatgattttcatctatttcaattgaaaaaatac 25636079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 116 - 301
Target Start/End: Original strand, 39653441 - 39653626
Alignment:
Q  116 ttatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaa 215  Q
    |||| ||||| |||||| ||| |||||||||||||||| ||| ||||||| |||||||||||||| || ||||||||||||| ||||| ||| | ||| |    
T  39653441 ttatggattgtggttgttgcggtgtgaattaatcacaatattccacaactcttaaataatgatagcaacgtaaataacttaaactagatataaagttgga 39653540  T
Q  216 gttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaa 301  Q
    |||||||||||||||| || |||||| |||||||||||| ||||| |||||| |||||||||||| ||||||||| | ||||||||    
T  39653541 gttctaaactagataaagagataacattatgtaatttatgatcaaatatgtactaaaaatatgatgttcatctatttcaattgaaa 39653626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 117 - 302
Target Start/End: Original strand, 47363689 - 47363874
Alignment:
Q  117 tatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaag 216  Q
    |||| ||||||||||||  | ||||||||||||| |||||||||||| | |||||||||||||  ||  |||||||||||| ||||||| ||||||||||    
T  47363689 tataaattgcggttgtcttggtgtgaattaatcaaaacattgcacaagtcttaaataatgataataacttaaataacttaaactagagaaagatttgaag 47363788  T
Q  217 ttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatct-atcttaattgaaaa 302  Q
    |||||||||||||||||| |||||  |||||||| ||| ||||| |||||| |||||||||| ||||||||| |||| |||||||||    
T  47363789 ttctaaactagataaggagataac-ttatgtaatctatgatcaaatatgtactaaaaatatgcttttcatctaatctcaattgaaaa 47363874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 10493472 - 10493579
Alignment:
Q  194 ttaacctagagatagatttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatctt 293  Q
    |||| |||||||| |||||| || ||||||||| ||||||| |||||| |||||||||||| ||||| |||| | ||||||||||| ||||||| ||||     
T  10493472 ttaaactagagatggatttggaggtctaaactatataaggagataacattatgtaatttatgatcaaatatgcattaaaaatatga-tttcatccatctc 10493570  T
Q  294 aattgaaaa 302  Q
    |||||||||    
T  10493571 aattgaaaa 10493579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 10493376 - 10493435
Alignment:
Q  138 tgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaa 197  Q
    |||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||    
T  10493376 tgtgaattaatcacaacattgcacaactcttaaataatgatagtaacgtaaataacttaa 10493435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 116 - 302
Target Start/End: Complemental strand, 33049311 - 33049115
Alignment:
Q  116 ttatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatg-ataggaatgtaaataacttaacctagagatagatttga 214  Q
    |||| ||||| ||| |||| | ||||||||||||| |||||||||||||| |||||||||| |||  ||  |||||||||| |  |||||||||||||||    
T  33049311 ttatggattgtggtcgtcgaggtgtgaattaatcaaaacattgcacaactcttaaataatgtataataacttaaataacttgaaatagagatagatttga 33049212  T
Q  215 agttctaaactagat----------aaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||| ||||||||||          ||||| |||||  | ||||||||||  |||| |||||| ||||||| ||||||||||| |||| |||||||||    
T  33049211 agtt-taaactagataaagagcataaaggagataaccttctgtaatttatgttcaaatatgtactaaaaatgtgattttcatccatctcaattgaaaa 33049115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 121 - 206
Target Start/End: Original strand, 7493053 - 7493138
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagat 206  Q
    ||||| |||| || || |||||||||||||||||||| ||||||| |||||||||||||| || |||||||| |||| ||||||||    
T  7493053 gattgtggttatcacggtgtgaattaatcacaacattacacaactcttaaataatgatagtaacgtaaataatttaaactagagat 7493138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 378
Target Start/End: Original strand, 47363963 - 47364030
Alignment:
Q  311 aacggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaa 378  Q
    |||||||||||| |||||||||||||||||| |  |||||||||||||||| ||||| ||||||||||    
T  47363963 aacggtaacgtccgctacctatactttttgtggtggcctttttctcggtaacggaccgttttttaaaa 47364030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 45435484 - 45435419
Alignment:
Q  209 atttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaa 274  Q
    ||||||||||||||||||||||| || |||||| |||||||||||| ||||| |||||| ||||||    
T  45435484 atttgaagttctaaactagataaagagataacattatgtaatttatgatcaaatatgtactaaaaa 45435419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 31743052 - 31742958
Alignment:
Q  138 tgtgaattaatcacaacattgcacaacttttaaataatg-ataggaatgtaaataacttaacctagagatagatttgaagttctaaactagataa 231  Q
    |||||||||||||||||||||||||  | |||||||||| |||  ||  ||||||||||||  ||||||||||||||||||| | || |||||||    
T  31743052 tgtgaattaatcacaacattgcacagttcttaaataatgtataataacttaaataacttaaattagagatagatttgaagttttgaagtagataa 31742958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 45435603 - 45435503
Alignment:
Q  122 attgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaa--ataacttaacctagagatagatttgaagttc 219  Q
    ||||| ||| ||||| ||||||||||| |||| ||||||||||| ||||||||| |||| |||| ||  |||||||||  | |||||| |||||||||||    
T  45435603 attgcagttatcgcggtgtgaattaataacaatattgcacaactcttaaataataatagtaatggaaatataacttaaattggagataaatttgaagttc 45435504  T
Q  220 t 220  Q
    |    
T  45435503 t 45435503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 2e-48; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 120 - 302
Target Start/End: Original strand, 37794640 - 37794821
Alignment:
Q  120 agattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttc 219  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||  || ||||||||  | ||||| ||||||| |||||    
T  37794640 agattgcggttgtcgtggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttagataacttagaccagagaaagatttggagttc 37794739  T
Q  220 taaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    ||||||||||||||| |||||  |||||||||||| ||||| |||||| |||||||||||||||| ||||||| |||||||||    
T  37794740 taaactagataaggagataac-ttatgtaatttatgatcaaatatgtactaaaaatatgattttcttctatctcaattgaaaa 37794821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 121 - 302
Target Start/End: Original strand, 17988977 - 17989157
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 220  Q
    |||||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||| ||  |||||||||||| ||||| | ||||||| ||||||    
T  17988977 gattgcggttgtcgaggtgtgaattaatcacaatattgcacaactcttaaataatgatagtaacttaaataacttaaactagaaaaagatttggagttct 17989076  T
Q  221 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||||||||||||| |||| | ||| |||||||| ||||| |||||| ||||||||||||||||||| |||| |||||||||    
T  17989077 aaactagataaggagataa-attatataatttatgatcaaatatgtactaaaaatatgattttcatcgatctcaattgaaaa 17989157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 5430407 - 5430210
Alignment:
Q  42 ttttaaacaacggtcgcggtcaaggtccaggtcgtgtatatgatttcaccatttcggccgttacatatattgtattatagattgcggttgtcgcgctgtg 141  Q
    ||||||| || |||||||  ||| |||  ||||| ||||||||||| || |||||||  |||||  || ||| |||| |||||| |||||||||| ||||    
T  5430407 ttttaaataatggtcgcgaacaatgtcgcggtcgcgtatatgattttacgatttcggttgttacggatgttgcattacagattgtggttgtcgcggtgtg 5430308  T
Q  142 aattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactagataaggaaataa 239  Q
    |||||||||||| ||||||||||| |||||||||||||| ||  |||||||||||| ||||||||||| ||| | ||||||| |||||||||| ||||    
T  5430307 aattaatcacaatattgcacaactcttaaataatgatagtaacataaataacttaaactagagatagagttggatttctaaagtagataaggagataa 5430210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 122 - 212
Target Start/End: Complemental strand, 19263911 - 19263821
Alignment:
Q  122 attgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagattt 212  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| ||  |||||||||||  ||||||||||||||    
T  19263911 attgcggttgttgcgctgtgaattaatcacaacattgcacaattcttaaataatgatagtaacataaataacttatactagagatagattt 19263821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 35016316 - 35016388
Alignment:
Q  124 tgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataactta 196  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||  |||||||||||    
T  35016316 tgcggttgtcgcggtgtgaattaatcacaacattacacaactcttaaataatgatagtaacttaaataactta 35016388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 35016457 - 35016541
Alignment:
Q  207 agatttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatct 292  Q
    ||||||| | |||||||||||||||||| |||||  ||| |||||||| ||||| ||||||  |||||||||||||||||||||||    
T  35016457 agatttggaattctaaactagataaggagataact-tatataatttatgatcaaatatgtatcaaaaatatgattttcatctatct 35016541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 5428699 - 5428641
Alignment:
Q  243 tatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaa 301  Q
    |||||||||||| ||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  5428699 tatgtaatttatgatcaattatgtactaataatatgattttcatctatctcaattgaaa 5428641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 19263824 - 19263772
Alignment:
Q  249 atttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaa 301  Q
    |||||| ||||| |||||| |||||||||||||||||||||||| ||||||||    
T  19263824 atttatgatcaaatatgtattaaaaatatgattttcatctatctcaattgaaa 19263772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 20929922 - 20929880
Alignment:
Q  120 agattgcggttgtcgcgctgtgaattaatcacaacattgcaca 162  Q
    |||| |||||||||||| |||||||||||||||||| ||||||    
T  20929922 agatcgcggttgtcgcggtgtgaattaatcacaacaatgcaca 20929880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 121 - 302
Target Start/End: Original strand, 11783396 - 11783577
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 220  Q
    ||||| |||||||||  |||||| |||| |||||||||||||||| |||||||||||||| ||  |||| ||||||| | ||||||||||||| ||||||    
T  11783396 gattgtggttgtcgctttgtgaagtaattacaacattgcacaactcttaaataatgatagtaacataaagaacttaaacaagagatagatttggagttct 11783495  T
Q  221 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||||||| ||||| | |||| | |||||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||    
T  11783496 aaactagacaaggagacaacattgtgtaatttatgatcaaatatgtactaaaaatatgattttcatctatctcaattgaaaa 11783577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 141 - 302
Target Start/End: Complemental strand, 7299267 - 7299106
Alignment:
Q  141 gaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactagataaggaaataac 240  Q
    ||||||| |||||||||| |||||| |||||||| ||||| || ||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  7299267 gaattaaccacaacattgtacaactcttaaataacgatagtaacgtaaataacttaaactagagatagatttgaa-ttctaaagtagataaggagataac 7299169  T
Q  241 agtatgtaatttataatcaagtatgtagtaaaaatatgattttcatc-tatcttaattgaaaa 302  Q
    | |||||||||||| || || |||||| | |||||||| |||||||| ||||| |||||||||    
T  7299168 attatgtaatttatgattaaatatgtacttaaaatatggttttcatcgtatctcaattgaaaa 7299106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 382
Target Start/End: Complemental strand, 7298994 - 7298925
Alignment:
Q  313 cggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaacctc 382  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  7298994 cggtaacgtcggctaccgatactttttgtcgcggcctttttctcggtaacggaccgttttttaaaacctc 7298925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 175
Target Start/End: Complemental strand, 53527228 - 53527191
Alignment:
Q  138 tgtgaattaatcacaacattgcacaacttttaaataat 175  Q
    ||||||||||||||||||||||||||||||||||||||    
T  53527228 tgtgaattaatcacaacattgcacaacttttaaataat 53527191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 1e-43; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 121 - 275
Target Start/End: Complemental strand, 12990694 - 12990541
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 220  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||| |||||||||||||| ||  |||||||||||| ||||||| ||||||||||||||    
T  12990694 gattgcagttgtcgcggtgtgaattagtcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactagagaaagatttgaagttct 12990595  T
Q  221 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaat 275  Q
    |||||||||||||| |||| | |||||||||||| ||||| |||||| |||||||    
T  12990594 aaactagataaggagataa-attatgtaatttatgatcaaatatgtattaaaaat 12990541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 115 - 301
Target Start/End: Complemental strand, 34664964 - 34664779
Alignment:
Q  115 attatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttga 214  Q
    ||||| ||||| ||||||| || | ||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||| |||| ||     
T  34664964 attatggattgtggttgtcacggtatgaattaattacaacattgcacaacttttaaataatgatagtaacgtaaataacttaaactatagacagatatgg 34664865  T
Q  215 agttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaa 301  Q
    |||||||||||||||||| | |||||  |||||||||||| ||||| || ||| | |||||||||||||||||||||| ||||||||    
T  34664864 agttctaaactagataagaagataacgttatgtaatttatgatcaaatacgtact-aaaatatgattttcatctatctcaattgaaa 34664779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 121 - 307
Target Start/End: Original strand, 32617560 - 32617744
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 220  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||| ||  | |||||||||| ||||||| |  |||  |||| |    
T  32617560 gattgcggttgtcgcggtgtaaattaatcacaacattgcacaactcttaaataacgatagtaacttgaataacttaaactagagaaatctttagagtt-t 32617658  T
Q  221 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaagatac 307  Q
    |||||||||||||| |||||  |||||||||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| ||||    
T  32617659 aaactagataaggagataac-ttatgtaatttatgatcaaatatgtactaaaaatatgattttcatctatctcaattgaaaaaatac 32617744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 121 - 302
Target Start/End: Complemental strand, 9457794 - 9457617
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 220  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||| |||||   ||||||  ||||||    
T  9457794 gattgcggttgttgcggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactaga---agattttgagttct 9457698  T
Q  221 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||| || |||||| |||||  |  ||||||||| ||||  ||||||  |||||||||||||| |||||||| |||||||||    
T  9457697 aaacaaggtaaggagataac-ttgagtaatttatgatcagatatgtatcaaaaatatgatttttatctatctcaattgaaaa 9457617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 121 - 302
Target Start/End: Complemental strand, 9461891 - 9461714
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 220  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||| |||||   ||||||  ||||||    
T  9461891 gattgcggttgttgcggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactaga---agattttgagttct 9461795  T
Q  221 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||| || |||||| |||||  |  ||||||||| ||||  ||||||  |||||||||||||| |||||||| |||||||||    
T  9461794 aaacaaggtaaggagataac-ttgagtaatttatgatcagatatgtatcaaaaatatgatttttatctatctcaattgaaaa 9461714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 127 - 302
Target Start/End: Original strand, 14081707 - 14081872
Alignment:
Q  127 ggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaacta 226  Q
    |||||||||  |||| |||||||||||||||||| |||||||||||||||  || ||  |||||||||||| |||||||||||||     ||||||| ||    
T  14081707 ggttgtcgcagtgtgcattaatcacaacattgcataacttttaaataatg--agcaacttaaataacttaaactagagatagatt-----ttctaaatta 14081799  T
Q  227 gataaggaaataacagt-atgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    ||||| || |||||| | ||||||||    ||||| ||| || ||||||| |||||||||||||||| |||||||||    
T  14081800 gataatgagataacattaatgtaatt----atcaaatatatactaaaaatttgattttcatctatctcaattgaaaa 14081872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 311 - 382
Target Start/End: Original strand, 32617859 - 32617931
Alignment:
Q  311 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacctc 382  Q
    |||||||||||| ||||||||||| ||||||| || ||||||||||||||||  |||| ||||||||||||||    
T  32617859 aacggtaacgtccgctacctatacctttttgtggcggcctttttctcggtaaccgaccgttttttaaaacctc 32617931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 9457517 - 9457446
Alignment:
Q  311 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 381  Q
    ||||| |||||| ||| ||||||| |||||||||| ||||||| |||||||| | |||||||||||||||||    
T  9457517 aacggcaacgtccgctgcctatacctttttgtcgcggccttttactcggtaacgaaccattttttaaaacct 9457446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 9461614 - 9461543
Alignment:
Q  311 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 381  Q
    ||||| |||||| ||| ||||||| |||||||||| ||||||| |||||||| | |||||||||||||||||    
T  9461614 aacggcaacgtccgctgcctatacctttttgtcgcggccttttactcggtaacgaaccattttttaaaacct 9461543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 311 - 380
Target Start/End: Complemental strand, 12990214 - 12990144
Alignment:
Q  311 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacc 380  Q
    ||||||||||||  |||||||||| ||||| |||| |||||||||||||||| | ||| ||||||||||||    
T  12990214 aacggtaacgtccactacctatacctttttatcgcagcctttttctcggtaacgaaccgttttttaaaacc 12990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 24699887 - 24699966
Alignment:
Q  223 actagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||||||||  | |||||| |||||||| ||| ||||| ||| ||  |||||||| |||||||||||||| |||||||||    
T  24699887 actagataaaaagataacattatgtaatatattatcaaatatatacgaaaaatataattttcatctatctcaattgaaaa 24699966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 963139 - 963102
Alignment:
Q  119 tagattgcggttgtcgcgctgtgaattaatcacaacat 156  Q
    |||||||||||||||| | |||||||||||||||||||    
T  963139 tagattgcggttgtcgtggtgtgaattaatcacaacat 963102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 3e-41; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 124 - 302
Target Start/End: Original strand, 23489962 - 23490139
Alignment:
Q  124 tgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaa 223  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| ||||||| |||||| ||  || | ||| ||| ||||||| ||||||| |||||||||    
T  23489962 tgcggttgttgcggtgtgaattaatcacaacattgtacaactcttaaatactgatagtaacttagacaacataaactagagaaagatttggagttctaaa 23490061  T
Q  224 ctagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    ||||||||||| |||||  |||||||||||| ||||| ||||||  ||||||||||||||||||||||| |||||||||    
T  23490062 ctagataaggagataac-ttatgtaatttatgatcaaatatgtacgaaaaatatgattttcatctatctcaattgaaaa 23490139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 13402262 - 13402173
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagat 210  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||| ||| | ||||||    
T  13402262 gattgcggttgtcgcggtgtgaattaatcacaacattacacaactcttaaataatgatagtaaggtaaataacttaaactaaaaatagat 13402173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 13396969 - 13396888
Alignment:
Q  116 ttatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaa 197  Q
    |||| |||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||||| || |||||||||||||    
T  13396969 ttatggattgcggctgtcgcggtgtgaattaatcacaacattacacaactcttaaataatgatagtaaggtaaataacttaa 13396888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 302
Target Start/End: Original strand, 7154249 - 7154439
Alignment:
Q  124 tgcggttgtcgcgctgtgaattaatcacaacattgcacaa--ctt----------ttaaataatgataggaatgtaaataacttaacctagagatagatt 211  Q
    ||||||||||| | ||||||||||||||||||||||||||  |||          |||||||||||||  |  ||||||||||||| | | |||||||||    
T  7154249 tgcggttgtcgtgatgtgaattaatcacaacattgcacaagtcttaaataaagtcttaaataatgataataccgtaaataacttaaaccatagatagatt 7154348  T
Q  212 tgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |  |||||| ||  ||||||||| |||  | |||||||| ||| ||||| |||||| ||||||||||||||||||||||||| ||| ||||    
T  7154349 ttgagttctgaatcagataaggagatataattatgtaatatatgatcaaatatgtattaaaaatatgattttcatctatcttcatttaaaa 7154439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 14370856 - 14370805
Alignment:
Q  128 gttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgata 179  Q
    ||||||| | |||||||||||||||||||||||||||| |||  ||||||||    
T  14370856 gttgtcgtggtgtgaattaatcacaacattgcacaactcttacttaatgata 14370805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 14867365 - 14867423
Alignment:
Q  244 atgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||||||||||  |||| |||||| ||||||| ||||||||||| |||| |||||||||    
T  14867365 atgtaatttatgttcaaatatgtactaaaaatgtgattttcatccatctcaattgaaaa 14867423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 14867560 - 14867618
Alignment:
Q  324 gctacctata-ctttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 381  Q
    |||||||||| |||| |||||| ||||||||||| |||| ||||| |||||||||||||    
T  14867560 gctacctatatctttctgtcgcggcctttttctcagtaacggaccgttttttaaaacct 14867618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 23490243 - 23490309
Alignment:
Q  314 ggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaac 379  Q
    |||||| |||||||||||||| |||||||||| ||||||||||| |||| ||||  || ||||||||    
T  23490243 ggtaacttcggctacctatacctttttgtcgcggcctttttctcagtaacggacggttctttaaaac 23490309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 3e-38; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 127 - 300
Target Start/End: Complemental strand, 41283664 - 41283493
Alignment:
Q  127 ggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaacta 226  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||| ||||| ||  |||||||||||| ||||||| ||||||||||||||||||||    
T  41283664 ggttgtcgtggtgtgaattaatcacaacattgcacaacttttgaataaagatagtaacataaataacttaaactagagaaagatttgaagttctaaacta 41283565  T
Q  227 gataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaa 300  Q
    |||||||| |||||  ||| |||||||| ||||  | |||| |||||||  ||||||||||||||| |||||||    
T  41283564 gataaggagataac-ttat-taatttatgatcagatttgtactaaaaatgggattttcatctatctcaattgaa 41283493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 39426087 - 39426260
Alignment:
Q  128 gttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactag 227  Q
    ||||||||| ||||||||||| ||||||||||||||||  || ||| |||||| ||||||||||||||||  || ||||| ||||| | ||||||||||     
T  39426087 gttgtcgcggtgtgaattaattacaacattgcacaactcatacatattgatagtaatgtaaataacttaa-atatagatatatttgga-ttctaaactat 39426184  T
Q  228 ataaggaaataacagtatgtaatttataatcaagtatgtagtaaaa-atatgattttcatctatcttaattgaaaa 302  Q
    ||||||| || ||| |||||||||||| ||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  39426185 ataaggagatgacattatgtaatttatgatcaaatatgtactaaaatatatgattttcatctatcttaattgaaaa 39426260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 22927061 - 22927236
Alignment:
Q  128 gttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactag 227  Q
    |||||||||  ||||||||||||||||||||| ||||| ||||||||||| || ||  |||||||||||| ||||||||||||| || ||||||||||||    
T  22927061 gttgtcgcgacgtgaattaatcacaacattgcccaactcttaaataatgaaagtaacataaataacttaaactagagatagattcgaggttctaaactag 22927160  T
Q  228 ataaggaaataacagtatgtaatttataatcaa--gtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    | || || |||||| ||||| |||||| |||||  || ||||  ||||||||||||||||||||||| |||||||||    
T  22927161 acaatgagataaca-tatgtgatttatgatcaaatgtgtgtacaaaaaatatgattttcatctatctcaattgaaaa 22927236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 121 - 302
Target Start/End: Complemental strand, 36491666 - 36491494
Alignment:
Q  121 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 220  Q
    |||| |||||||| || ||||||||||||| ||||||||| || | |||||| ||||||| || ||||||||| ||| ||||||||||||||  ||||||    
T  36491666 gattacggttgtcacggtgtgaattaatcataacattgcaaaattcttaaatgatgatagtaaagtaaataacataaactagagatagattttgagttct 36491567  T
Q  221 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    ||||||||| |||||  ||||         |||| || || |||||| ||||||||||||||||||||||||||||||||||    
T  36491566 aaactagatgaggaaccaaca---------ttatgattaaatatgtactaaaaatatgattttcatctatcttaattgaaaa 36491494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 128 - 302
Target Start/End: Original strand, 13424636 - 13424806
Alignment:
Q  128 gttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactag 227  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||||    ||  ||||||||||||  |||||| ||||||  | ||||||| |||    
T  13424636 gttgtcgtggtgtgaattaatcacaacattgcacaactcttaaataatga----aacttaaataacttaaaatagagaaagatttagaattctaaaatag 13424731  T
Q  228 a-taaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    | |||||| |||||  || || |||||| ||||| |||||| ||||||||| |||||||| ||| | |||||||||    
T  13424732 attaaggagataac-ttacgtgatttatgatcaaatatgtactaaaaatattattttcatttatttcaattgaaaa 13424806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 13424887 - 13424954
Alignment:
Q  315 gtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 381  Q
    ||||| |||||||||||||| ||||| |||| | |||||||||||||||||||||| |||||||||||    
T  13424887 gtaacatcggctacctatacctttttttcgcggtctttttctcggtaatggaccatattttaaaacct 13424954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 19967383 - 19967312
Alignment:
Q  311 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 381  Q
    ||||||||| |||||||||| ||| |||||| ||  |||||||||||||||||||||  |||||||||||||    
T  19967383 aacggtaacttcggctacctgtacctttttgccgtggcctttttctcggtaatggactgttttttaaaacct 19967312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 16341523 - 16341584
Alignment:
Q  243 tatgtaatttata--atcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    |||||||||||||  ||||| |||||| |||||||||| ||||||||||||| |||||||||    
T  16341523 tatgtaatttatatgatcaaatatgtactaaaaatatgtttttcatctatctcaattgaaaa 16341584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 19967749 - 19967627
Alignment:
Q  38 aaggttttaaacaacggtcgcggtcaaggtccaggtcgtgtatatgatttcaccatttcggccgttacatatattgtattatagattgcggttgtcgcgc 137  Q
    ||||||||||| ||||||||| ||||||||| |||| | | ||| |||||| | |||||||||||||    | ||| |  |  |||||||||||||||      
T  19967749 aaggttttaaataacggtcgcagtcaaggtcgaggttgcggataggatttcgcgatttcggccgttatgggtgttgcaacactgattgcggttgtcgcag 19967650  T
Q  138 tgtgaattaatcacaacattgca 160  Q
    || ||||||||||||||||||||    
T  19967649 tgagaattaatcacaacattgca 19967627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 163
Target Start/End: Complemental strand, 37247695 - 37247652
Alignment:
Q  120 agattgcggttgtcgcgctgtgaattaatcacaacattgcacaa 163  Q
    |||||| |||||||||| |||||||||||||||||| |||||||    
T  37247695 agattgtggttgtcgcggtgtgaattaatcacaacaatgcacaa 37247652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 41283365 - 41283294
Alignment:
Q  311 aacggtaacgtcggctacctatact-ttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 381  Q
    |||||||||||| |||||||||||| ||||||| |  |||||||||  |||| ||||| |||||||||||||    
T  41283365 aacggtaacgtccgctacctatacttttttgtcacgacctttttcttagtaacggaccgttttttaaaacct 41283294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 4e-34; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 133 - 302
Target Start/End: Complemental strand, 9177760 - 9177588
Alignment:
Q  133 cgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactagataag 232  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||| ||| ||||||||||| ||||||||||||| |       
T  9177760 cgcggtgtgaattaatcacaacattgcacaactcttgaataatgatagtaacgtaaataacttaaactaaagatagatttggagttctaaactaggt--- 9177664  T
Q  233 gaaataacagtatgtaatttat------aatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    || |||||| ||||||||||||      | |||| |||||| ||||||||||||||||||| |||| |||||||||    
T  9177663 gagataacattatgtaatttatgatcaaattcaaatatgtactaaaaatatgattttcatcaatctcaattgaaaa 9177588  T

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Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 26660607 - 26660726
Alignment:
Q  122 attgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttcta 221  Q
    |||||||||||| || |||||||||||||||||||||||||||| |||||| |  |||| ||  ||||||| |||| ||| ||| ||||||| |||||||    
T  26660607 attgcggttgtcacggtgtgaattaatcacaacattgcacaactcttaaatcacaatagtaacttaaataatttaaactaaagaaagatttggagttcta 26660706  T
Q  222 aactagataaggaaataaca 241  Q
    ||||| | ||||| ||||||    
T  26660707 aactatacaaggagataaca 26660726  T

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Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 26766578 - 26766697
Alignment:
Q  122 attgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttcta 221  Q
    |||||||||||| || |||||||||||||||||||||||||||| |||||| |  |||| ||  ||||||| |||| ||| ||| ||||||| |||||||    
T  26766578 attgcggttgtcacggtgtgaattaatcacaacattgcacaactcttaaatcacaatagtaacttaaataatttaaactaaagaaagatttggagttcta 26766677  T
Q  222 aactagataaggaaataaca 241  Q
    ||||| | ||||| ||||||    
T  26766678 aactatacaaggagataaca 26766697  T

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Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 32296445 - 32296363
Alignment:
Q  220 taaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 302  Q
    ||||||| ||||||| ||| || ||||||| |||| ||||| |||||| |||||||||||||||||||||||| |||||||||    
T  32296445 taaactatataaggagataccattatgtaacttatgatcaaatatgtactaaaaatatgattttcatctatctcaattgaaaa 32296363  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 209 - 285
Target Start/End: Complemental strand, 10117259 - 10117185
Alignment:
Q  209 atttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttca 285  Q
    ||||| |||||||||||||||||||| || |   |||||||||||| ||||| |||||| |||||||||||||||||    
T  10117259 atttggagttctaaactagataaggagattat--tatgtaatttatgatcaaatatgtactaaaaatatgattttca 10117185  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 8169240 - 8169310
Alignment:
Q  311 aacggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 381  Q
    ||||||||||||| |||||||||| ||||||||   ||||||||||||||| || |  |||||||||||||    
T  8169240 aacggtaacgtcgactacctataccttttgtcgtgacctttttctcggtaacgggcagttttttaaaacct 8169310  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 9771975 - 9771928
Alignment:
Q  116 ttatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaa 163  Q
    |||| ||||| ||| |||||| ||||||||||||||||||||||||||    
T  9771975 ttatggattgtggtcgtcgcgttgtgaattaatcacaacattgcacaa 9771928  T

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Target: scaffold0989 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 333 - 379
Target Start/End: Original strand, 2119 - 2165
Alignment:
Q  333 actttttgtcgccgcctttttctcggtaatggaccattttttaaaac 379  Q
    |||||||||||| ||||||||||||||||  |||| |||||||||||    
T  2119 actttttgtcgcggcctttttctcggtaacagaccgttttttaaaac 2165  T

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