View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20335_high_17 (Length: 380)

Name: NF20335_high_17
Description: NF20335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20335_high_17
NF20335_high_17
[»] chr8 (12 HSPs)
chr8 (1-361)||(28252235-28252611)
chr8 (261-325)||(16052402-16052466)
chr8 (261-327)||(24120155-24120221)
chr8 (261-322)||(22894659-22894720)
chr8 (273-311)||(11310341-11310379)
chr8 (277-326)||(10866913-10866962)
chr8 (261-320)||(6358629-6358688)
chr8 (293-326)||(5570305-5570338)
chr8 (261-309)||(12956431-12956479)
chr8 (261-309)||(14977232-14977280)
chr8 (277-321)||(30851240-30851284)
chr8 (271-319)||(32239219-32239267)
[»] chr5 (8 HSPs)
chr5 (261-326)||(24841678-24841743)
chr5 (259-326)||(11274454-11274520)
chr5 (259-326)||(17027452-17027519)
chr5 (261-311)||(17382160-17382210)
chr5 (261-319)||(25594817-25594875)
chr5 (271-320)||(22967977-22968026)
chr5 (293-326)||(12029545-12029578)
chr5 (261-305)||(30790727-30790771)
[»] chr1 (7 HSPs)
chr1 (261-326)||(23223336-23223401)
chr1 (271-323)||(30675411-30675463)
chr1 (261-318)||(25777956-25778013)
chr1 (271-319)||(12424050-12424097)
chr1 (261-319)||(25730696-25730754)
chr1 (271-319)||(12810256-12810302)
chr1 (277-321)||(26101987-26102031)
[»] chr6 (5 HSPs)
chr6 (271-319)||(12974270-12974318)
chr6 (261-317)||(30355260-30355316)
chr6 (271-318)||(15576297-15576344)
chr6 (271-326)||(16527821-16527876)
chr6 (296-326)||(1755712-1755742)
[»] chr2 (8 HSPs)
chr2 (261-325)||(28278548-28278611)
chr2 (261-320)||(21505264-21505323)
chr2 (277-319)||(18236443-18236485)
chr2 (261-326)||(31449882-31449947)
chr2 (277-326)||(39730372-39730421)
chr2 (280-326)||(29769614-29769660)
chr2 (261-307)||(32619586-32619632)
chr2 (271-307)||(19949690-19949725)
[»] chr4 (8 HSPs)
chr4 (261-320)||(5906845-5906905)
chr4 (261-316)||(12111455-12111510)
chr4 (261-317)||(15192137-15192193)
chr4 (271-326)||(1676430-1676485)
chr4 (271-326)||(1682958-1683013)
chr4 (277-326)||(10576378-10576427)
chr4 (271-311)||(10320354-10320394)
chr4 (271-303)||(34864426-34864458)
[»] chr7 (11 HSPs)
chr7 (268-326)||(20470942-20471000)
chr7 (261-319)||(29544451-29544509)
chr7 (259-319)||(7142030-7142090)
chr7 (271-326)||(9761541-9761595)
chr7 (271-326)||(9802000-9802054)
chr7 (268-323)||(22532775-22532830)
chr7 (272-319)||(23124833-23124880)
chr7 (271-324)||(7494638-7494691)
chr7 (261-318)||(18496498-18496555)
chr7 (271-319)||(21545933-21545984)
chr7 (277-317)||(2353381-2353421)
[»] chr3 (7 HSPs)
chr3 (271-325)||(13911191-13911245)
chr3 (271-319)||(17637035-17637083)
chr3 (261-324)||(21017803-21017867)
chr3 (279-326)||(8402693-8402740)
chr3 (155-218)||(26892085-26892148)
chr3 (271-319)||(19219346-19219394)
chr3 (275-319)||(25919603-25919647)
[»] scaffold0002 (1 HSPs)
scaffold0002 (271-319)||(446937-446984)
[»] scaffold0386 (2 HSPs)
scaffold0386 (268-319)||(8841-8892)
scaffold0386 (268-304)||(13203-13239)
[»] scaffold0282 (1 HSPs)
scaffold0282 (261-326)||(22670-22735)
[»] scaffold0188 (1 HSPs)
scaffold0188 (261-310)||(27079-27128)
[»] scaffold0171 (1 HSPs)
scaffold0171 (271-319)||(6128-6176)


Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 361
Target Start/End: Original strand, 28252235 - 28252611
Alignment:
Q  1 aacatctcaatacat-tctctctctttttatgttgatgatttgatgatatactacaaagaagaaagctcaggtttgaattctcttaaggatttattcaac 99  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28252235 aacatctgaatacatctctctctctttttatgttgatgatttgattatatactacaaagaagaaagctcaggtttgaattctcttaaggatttattcaac 28252334  T
Q  100 atatatgctatgaaaaatagctataatttctttgaagaagatatgtagacttgttgatcaaggttgtctcaacatgagatctttaattagtctcaacaat 199  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  28252335 atatatgctatgaaaaattgctataatttctttgaagaagatatgtagacttgttgataaaggttgtctcaacatcagatctctaattaggctcaacaat 28252434  T
Q  200 gcaagtaatttgaagttatcatgaaatattctgcattgacatctcttctaactctcatc----------ttaaatgcgaataaaagtactaaaaacatag 289  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||          |||||| |||||||||||| ||||||||||     
T  28252435 gcaagtaatttgaagttatcatggaatattctgcattgacatctcttctaactctcatcttatttgtctttaaatacgaataaaagtattaaaaacataa 28252534  T
Q  290 caaaaaatatcatatgatgctccgtcatcacaacccc-----ctcttaggtgagttctcacaacctaacaacccaat 361  Q
    ||||||||||||||||||||||| |||||||||||||     || ||||||||||||||||||||||||||||||||    
T  28252535 caaaaaatatcatatgatgctccttcatcacaaccccctaatctgttaggtgagttctcacaacctaacaacccaat 28252611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 261 - 325
Target Start/End: Original strand, 16052402 - 16052466
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaaccc 325  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16052402 aaatgcaaataaaagtactaaaaacatagccaaaaatatcatatgatgctccgtcatcacaaccc 16052466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 24120221 - 24120155
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaaccccc 327  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  24120221 aaatgcaaagaaaagtactaaaaacatagcaaaaaatatcatatgatgattcgtcatcacaaccccc 24120155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 322
Target Start/End: Original strand, 22894659 - 22894720
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaa 322  Q
    ||||||||| |||||||||||||||||| | |||||| ||||||||||||| ||||||||||    
T  22894659 aaatgcgaagaaaagtactaaaaacatacctaaaaatgtcatatgatgctctgtcatcacaa 22894720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 11310341 - 11310379
Alignment:
Q  273 aagtactaaaaacatagcaaaaaatatcatatgatgctc 311  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11310341 aagtactaaaaacatagcaaaaaatatcatatgatgctc 11310379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 10866962 - 10866913
Alignment:
Q  277 actaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    ||||||| |||| ||||||||||||||||||| ||| |||||||||||||    
T  10866962 actaaaatcataccaaaaaatatcatatgatgttccatcatcacaacccc 10866913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 6358688 - 6358629
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcac 320  Q
    |||||| |||||||||||||||||||||||  ||||| ||||||  ||||| ||||||||    
T  6358688 aaatgcaaataaaagtactaaaaacatagcccaaaatgtcatatagtgctctgtcatcac 6358629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 5570305 - 5570338
Alignment:
Q  293 aaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||||||||||||||||| |||||||||||    
T  5570305 aaaatatcatatgatgctccgttatcacaacccc 5570338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 12956479 - 12956431
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgc 309  Q
    |||||| || |||||||||||||||||||  |||||||||| |||||||    
T  12956479 aaatgcaaagaaaagtactaaaaacatagacaaaaatatcacatgatgc 12956431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 14977232 - 14977280
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgc 309  Q
    |||||| || |||||| ||||||||||||  ||||||||||||||||||    
T  14977232 aaatgcaaagaaaagtgctaaaaacatagttaaaaatatcatatgatgc 14977280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 30851240 - 30851284
Alignment:
Q  277 actaaaaacatagcaaaaaatatcatatgatgctccgtcatcaca 321  Q
    |||||||||||||| ||||||||||||||| | ||| ||||||||    
T  30851240 actaaaaacatagccaaaaatatcatatgacgttccatcatcaca 30851284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 32239267 - 32239219
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    |||||| ||||||||||||| |||||||||||| ||||| || ||||||    
T  32239267 aaaagtgctaaaaacatagccaaaaatatcatacgatgcaccatcatca 32239219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 24841743 - 24841678
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||| || || |||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  24841743 aaatgcaaagaatagtactaaaaacatagcaaaaaatgtcatatgatgctctgtcatcacaacccc 24841678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 11274454 - 11274520
Alignment:
Q  259 ttaaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||| || |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  11274454 ttaaatgcaaagaaaagtactaaaaa-atagcaaaaaatatcaaatgatgctccttcatcacaacccc 11274520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 17027519 - 17027452
Alignment:
Q  259 ttaaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||| || |||||||||||||||||||| |||||| |||||||||||||| || ||||||||||    
T  17027519 ttaaatgcaaagaaaagtactaaaaacatagccaaaaatgtcatatgatgctccctcgtcacaacccc 17027452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 311
Target Start/End: Original strand, 17382160 - 17382210
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctc 311  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||||||    
T  17382160 aaatgcaaaaaaaagtactaaacacatagcaaaaaatatcatatgatgctc 17382210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 25594817 - 25594875
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    |||||| ||||||||||||||||||||||| |||||||  ||||||||||| |||||||    
T  25594817 aaatgcaaataaaagtactaaaaacatagccaaaaataatatatgatgctctgtcatca 25594875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 22967977 - 22968026
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcac 320  Q
    |||| |||||||||||||||  ||||||||||||||| ||||||||||||    
T  22967977 aaaactactaaaaacatagcctaaaatatcatatgatactccgtcatcac 22968026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 326
Target Start/End: Complemental strand, 12029578 - 12029545
Alignment:
Q  293 aaaatatcatatgatgctccgtcatcacaacccc 326  Q
    ||||||||||||||||||| ||||||||||||||    
T  12029578 aaaatatcatatgatgctcggtcatcacaacccc 12029545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 30790771 - 30790727
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatg 305  Q
    |||||| |||||||  ||||||||||||||||||||||| |||||    
T  30790771 aaatgcaaataaaataactaaaaacatagcaaaaaatattatatg 30790727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 23223401 - 23223336
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||| || ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||    
T  23223401 aaatgcaaagaaaagtacttaaaacatagccaaaaacatcatatgatgctccgtcatcacaacccc 23223336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 30675463 - 30675411
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaac 323  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||||||||    
T  30675463 aaaagttctaaaaacatagcaaaaaatgtcatatgatgctctgtcatcacaac 30675411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 25777956 - 25778013
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatc 318  Q
    |||||| || ||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  25777956 aaatgcaaagaaaagcactaagaacatagcaaaaaatatcatatgatactccgtcatc 25778013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 12424050 - 12424097
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    |||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  12424050 aaaagtactaaaaacatagccaaaa-tatcatatgatgctctgtcatca 12424097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 25730696 - 25730754
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaa-aatatcatatgatgctccgtcatca 319  Q
    |||||| || ||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  25730696 aaatgcaaagaaaagtactaaaa-catagcaaaaaaatatcatatgatgctctgtcatca 25730754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 12810302 - 12810256
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    ||||||||||||||||||| ||||||||||  |||||||| ||||||||    
T  12810302 aaaagtactaaaaacatagtaaaaaatatc--atgatgcttcgtcatca 12810256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 26102031 - 26101987
Alignment:
Q  277 actaaaaacatagcaaaaaatatcatatgatgctccgtcatcaca 321  Q
    ||||||||||| ||  |||||||||||||||||||| ||||||||    
T  26102031 actaaaaacatcgcctaaaatatcatatgatgctccatcatcaca 26101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 12974318 - 12974270
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12974318 aaaagtactaaaaccatagcaaaaaatatcatatgatgctccgtcatca 12974270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 30355316 - 30355260
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcat 317  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30355316 aaatgcaagtaaaagtactaaaaacatagccaaaaatatcatatgatgctccgtcat 30355260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 15576297 - 15576344
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatc 318  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  15576297 aaaagtactaaaaacatagccaaaaatatcatatgatgctccatcatc 15576344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 326
Target Start/End: Complemental strand, 16527876 - 16527821
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||||||||||||||| |||||||| ||||||||||| | ||||||||||||    
T  16527876 aaaagtactaaaaacatagccaaaaatattatatgatgctctgccatcacaacccc 16527821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 326
Target Start/End: Original strand, 1755712 - 1755742
Alignment:
Q  296 atatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||||||||||||||||||||||||||    
T  1755712 atatcatatgatgctccgtcatcacaacccc 1755742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 325
Target Start/End: Original strand, 28278548 - 28278611
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaaccc 325  Q
    |||||| || ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  28278548 aaatgcaaagaaaagtactaaaa-catagcaaaaaatatcatatgatgctctgtcatcacaaccc 28278611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 21505264 - 21505323
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcac 320  Q
    |||||| || |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  21505264 aaatgcaaagaaaaatactaaaaacatagccaaaaatatcatatgatgctccgtcatcac 21505323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 18236443 - 18236485
Alignment:
Q  277 actaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  18236443 actaaaaacatagcataaaatatcatatgatgctccgtcatca 18236485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 31449947 - 31449882
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||| |||||||  ||||||||||||||  ||||||||||| ||| |||| |||||||||||||    
T  31449947 aaatgcaaataaaataactaaaaacatagcttaaaatatcataagatactccatcatcacaacccc 31449882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 39730421 - 39730372
Alignment:
Q  277 actaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    ||||||||||||||  ||||||| ||||||||||||| ||||||||||||    
T  39730421 actaaaaacatagcctaaaatattatatgatgctccgccatcacaacccc 39730372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 326
Target Start/End: Complemental strand, 29769660 - 29769614
Alignment:
Q  280 aaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||||||  ||||||| ||||||||||||||||||| ||||||    
T  29769660 aaaaacatagcctaaaatattatatgatgctccgtcatcataacccc 29769614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 32619632 - 32619586
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgat 307  Q
    |||||| || |||||||||||||| ||||| ||||||||||||||||    
T  32619632 aaatgcaaagaaaagtactaaaaatatagccaaaaatatcatatgat 32619586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 19949690 - 19949725
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgat 307  Q
    ||||||||||||||||||| |||||||||||||||||    
T  19949690 aaaagtactaaaaacatag-aaaaaatatcatatgat 19949725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 5906845 - 5906905
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaa-atatcatatgatgctccgtcatcac 320  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||| | |||||||||    
T  5906845 aaatgcaaataaaagtactaaaaacatagcaaaaatatatcatatgatgtttcgtcatcac 5906905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 12111455 - 12111510
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtca 316  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  12111455 aaatgcaaataaaagtactaaaaacataacaaaaaatgtcatatgatgctctgtca 12111510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 15192193 - 15192137
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcat 317  Q
    |||||| || |||||||| ||||||||| |||||||| ||||||||||||| |||||    
T  15192193 aaatgcaaagaaaagtacgaaaaacataacaaaaaatgtcatatgatgctctgtcat 15192137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 1676430 - 1676485
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||| ||||| ||| | |||||| |||||||||||| |||||||||||||||    
T  1676430 aaaagtacaaaaaatataaccaaaaatgtcatatgatgcttcgtcatcacaacccc 1676485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 1682958 - 1683013
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||| ||||| ||| | |||||| |||||||||||| |||||||||||||||    
T  1682958 aaaagtacaaaaaatataaccaaaaatgtcatatgatgcttcgtcatcacaacccc 1683013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 10576427 - 10576378
Alignment:
Q  277 actaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||||||||   ||||||||||||||| |||| |||||||||||||    
T  10576427 actaaaaacatagtctaaaatatcatatgatactccatcatcacaacccc 10576378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 10320354 - 10320394
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctc 311  Q
    |||| ||||||||||||||| |||||| |||||||||||||    
T  10320354 aaaattactaaaaacatagcgaaaaatgtcatatgatgctc 10320394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 303
Target Start/End: Original strand, 34864426 - 34864458
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcata 303  Q
    |||||||||||||||||| ||||||||||||||    
T  34864426 aaaagtactaaaaacataacaaaaaatatcata 34864458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 326
Target Start/End: Original strand, 20470942 - 20471000
Alignment:
Q  268 aataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    ||||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||    
T  20470942 aataaaagtactaaaaacaaagccaaaaaattcatatgatgcttcgtcatcacaacccc 20471000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 29544509 - 29544451
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    |||||| || |||| || |||||||||||| ||||||||||||||||||||| ||||||    
T  29544509 aaatgcaaagaaaattaataaaaacatagccaaaaatatcatatgatgctccttcatca 29544451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 319
Target Start/End: Complemental strand, 7142090 - 7142030
Alignment:
Q  259 ttaaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    |||||||| || |||| || |||||||||||| |||||| ||||||||||||| |||||||    
T  7142090 ttaaatgcaaagaaaactattaaaaacatagccaaaaatgtcatatgatgctctgtcatca 7142030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 9761541 - 9761595
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    ||||||||||||||| |||| |||| | ||||||||||||| ||||||||||||||    
T  9761541 aaaagtactaaaaacgtagccaaaa-tgtcatatgatgctctgtcatcacaacccc 9761595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 9802000 - 9802054
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    ||||||||||||||| |||| |||| | ||||||||||||| ||||||||||||||    
T  9802000 aaaagtactaaaaacgtagccaaaa-tgtcatatgatgctctgtcatcacaacccc 9802054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 22532775 - 22532830
Alignment:
Q  268 aataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaac 323  Q
    |||||||  ||||||||||||||  |||||||||||||||||||| |||| |||||    
T  22532775 aataaaataactaaaaacatagcctaaaatatcatatgatgctccatcattacaac 22532830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 23124880 - 23124833
Alignment:
Q  272 aaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    |||||||||||||||||| ||||||| ||| |||||||||| ||||||    
T  23124880 aaagtactaaaaacatagtaaaaaatgtcagatgatgctccatcatca 23124833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 7494691 - 7494638
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacc 324  Q
    |||||||||||||  ||||| ||||||||||| ||||||||  |||||||||||    
T  7494691 aaaagtactaaaagaatagccaaaaatatcatgtgatgctcattcatcacaacc 7494638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 18496555 - 18496498
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatc 318  Q
    |||||| || |||| |||||||||||||||  ||||||||||||| |||||| |||||    
T  18496555 aaatgcaaagaaaactactaaaaacatagcctaaaatatcatatggtgctccatcatc 18496498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 21545933 - 21545984
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatg---atgctccgtcatca 319  Q
    |||||||||||||||||||  ||||||||||||||   ||||||||||||||    
T  21545933 aaaagtactaaaaacatagtcaaaaatatcatatgatcatgctccgtcatca 21545984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 317
Target Start/End: Original strand, 2353381 - 2353421
Alignment:
Q  277 actaaaaacatagcaaaaaatatcatatgatgctccgtcat 317  Q
    ||||||||||||||  ||||||||||| |||||||||||||    
T  2353381 actaaaaacatagcctaaaatatcatacgatgctccgtcat 2353421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 325
Target Start/End: Complemental strand, 13911245 - 13911191
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaaccc 325  Q
    |||| |||||||||||||| |||||||||||| |||| |||||||||||||||||    
T  13911245 aaaattactaaaaacatagaaaaaaatatcatttgattctccgtcatcacaaccc 13911191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 17637083 - 17637035
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    ||||||| || ||||||||| |||||| |||||||||||||||||||||    
T  17637083 aaaagtaatataaacatagccaaaaatgtcatatgatgctccgtcatca 17637035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 21017867 - 21017803
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaa-tatcatatgatgctccgtcatcacaacc 324  Q
    |||||| || |||| ||||||||||||| ||||||| ||||||||||||||| || |||||||||    
T  21017867 aaatgcaaagaaaaatactaaaaacataacaaaaaaatatcatatgatgctctgttatcacaacc 21017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 279 - 326
Target Start/End: Original strand, 8402693 - 8402740
Alignment:
Q  279 taaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||||||||   ||||||||||||||||||| ||||||||||||||    
T  8402693 taaaaacatagtctaaaatatcatatgatgctctgtcatcacaacccc 8402740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 26892085 - 26892148
Alignment:
Q  155 gatcaaggttgtctcaacatgagatctttaattagtctcaacaatgcaagtaatttgaagttat 218  Q
    ||||||||| | |||||||| | ||||||||||||| ||| |||||||| ||||||||| ||||    
T  26892085 gatcaaggtggcctcaacatcaaatctttaattagtgtcagcaatgcaaataatttgaaattat 26892148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Original strand, 19219346 - 19219394
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    |||| ||||||||||| ||| |||| |||||||||||||| ||||||||    
T  19219346 aaaaatactaaaaacacagctaaaagtatcatatgatgcttcgtcatca 19219394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 25919603 - 25919647
Alignment:
Q  275 gtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    |||||||||||||| | | ||||||||||||||||||| ||||||    
T  25919603 gtactaaaaacataaccagaaatatcatatgatgctccatcatca 25919647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 446984 - 446937
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  446984 aaaagtactaaaaacatagca-aaaatatcatatgatgctctgtcatca 446937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 319
Target Start/End: Original strand, 8841 - 8892
Alignment:
Q  268 aataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    ||||||||||||||||| ||| | ||||||||||||||||| ||| ||||||    
T  8841 aataaaagtactaaaaaaataaccaaaaatatcatatgatgttccatcatca 8892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 304
Target Start/End: Original strand, 13203 - 13239
Alignment:
Q  268 aataaaagtactaaaaacatagcaaaaaatatcatat 304  Q
    ||||||||||||||||||||| | |||||||||||||    
T  13203 aataaaagtactaaaaacataactaaaaatatcatat 13239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 22670 - 22735
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatcacaacccc 326  Q
    |||||| ||||||||||| ||||||||||| ||||||   |||||||| ||  |||||||||||||    
T  22670 aaatgcaaataaaagtacaaaaaacatagccaaaaatggtatatgatggtctatcatcacaacccc 22735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Original strand, 27079 - 27128
Alignment:
Q  261 aaatgcgaataaaagtactaaaaacatagcaaaaaatatcatatgatgct 310  Q
    |||||| || ||||||||||||||||||||  |||||||||| |||||||    
T  27079 aaatgcaaagaaaagtactaaaaacatagccgaaaatatcatgtgatgct 27128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 6176 - 6128
Alignment:
Q  271 aaaagtactaaaaacatagcaaaaaatatcatatgatgctccgtcatca 319  Q
    |||||||||||||||||||| ||||||  |||||||||||  |||||||    
T  6176 aaaagtactaaaaacatagccaaaaatgccatatgatgctatgtcatca 6128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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