View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20335_low_7 (Length: 456)
Name: NF20335_low_7
Description: NF20335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20335_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 46772658 - 46773115
Alignment:
| Q |
1 |
gaacaccacaatttgaacagtttgaacttaaaattgactttggtttgagacagagagagtaagcaaagacactgtacctcctaaattagctggtttggga |
100 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |
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| T |
46772658 |
gaacaccacaatttgaactgtttgaacttaaaattgactttggtttgagacagagagagcaagcaaaggcactgtacctcctaaattagctggtttggga |
46772757 |
T |
|
| Q |
101 |
aacttccccagcggagatgttttttgtgcactattcttgatccttcaaattatcaacataacataaacaattgagttaataacgtacaatacaaatattt |
200 |
Q |
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| T |
46772758 |
aacttccccagcggagatgttttttgtgcactattcttgatccttcaaattatcaacataacataaacaattgagttaataacatacaatacaaatattt |
46772857 |
T |
|
| Q |
201 |
atttaattttttaagaaaactaggcaatacaactattaatagcaacttaatcaatcaattaagata-----------------gaaggaactctagatta |
283 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
46772858 |
atttaatttttaaagaaaactaggcaatacaactattaatagcaacttaatcaatcaattaagatagaaggaacaatcctttggaaggaactctagatta |
46772957 |
T |
|
| Q |
284 |
aataacgcccctgagaatttctgagagacaatgagaatgaatgtattgaaagcaaaaggcaagatgtacctaatagattcttgcttgcatcttagacttg |
383 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46772958 |
aataacgcccctgagaatttctgagagacaatgagaatgaatgtgttgaaagcaaaaggcaagatgtacctaatagattcttgcttgcatcttagacttg |
46773057 |
T |
|
| Q |
384 |
ttctgagataagttgtggtgctacgaggacttagattaactccagaaaccagctttgt |
441 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46773058 |
ttctgagataagttgtggtgctacgaggacttagattaactccagaaaccagctttgt |
46773115 |
T |
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