View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20336_low_2 (Length: 662)

Name: NF20336_low_2
Description: NF20336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20336_low_2
NF20336_low_2
[»] chr1 (65 HSPs)
chr1 (16-638)||(38739719-38740343)
chr1 (21-306)||(19481383-19481669)
chr1 (97-306)||(21638257-21638468)
chr1 (97-306)||(2104252-2104461)
chr1 (97-306)||(482585-482796)
chr1 (97-248)||(19481222-19481373)
chr1 (97-242)||(15985192-15985337)
chr1 (97-300)||(11149420-11149631)
chr1 (128-304)||(40664144-40664321)
chr1 (97-248)||(14368809-14368959)
chr1 (97-272)||(40367471-40367654)
chr1 (97-304)||(35024453-35024655)
chr1 (92-248)||(463200-463363)
chr1 (187-300)||(463080-463194)
chr1 (16-139)||(35892385-35892504)
chr1 (184-306)||(4022116-4022239)
chr1 (58-181)||(35891890-35892013)
chr1 (184-306)||(2697322-2697445)
chr1 (184-306)||(17419777-17419900)
chr1 (184-306)||(20735512-20735635)
chr1 (184-306)||(31305701-31305824)
chr1 (173-280)||(13356933-13357042)
chr1 (21-94)||(40367715-40367788)
chr1 (184-306)||(8520084-8520207)
chr1 (233-306)||(20735794-20735868)
chr1 (234-306)||(45403480-45403553)
chr1 (255-306)||(15392166-15392217)
chr1 (184-294)||(19937046-19937157)
chr1 (255-306)||(29272898-29272949)
chr1 (184-306)||(33879769-33879892)
chr1 (184-306)||(33964363-33964486)
chr1 (234-295)||(36332152-36332214)
chr1 (184-306)||(45264653-45264775)
chr1 (196-296)||(38474285-38474386)
chr1 (225-308)||(22892422-22892506)
chr1 (184-303)||(43423269-43423389)
chr1 (255-306)||(29273057-29273108)
chr1 (255-306)||(29273216-29273267)
chr1 (251-306)||(35926239-35926294)
chr1 (196-297)||(17294980-17295082)
chr1 (196-297)||(29228450-29228552)
chr1 (196-297)||(45443222-45443324)
chr1 (234-306)||(39649075-39649148)
chr1 (97-197)||(40367814-40367921)
chr1 (196-299)||(45858657-45858761)
chr1 (255-306)||(9381161-9381212)
chr1 (184-306)||(15013515-15013638)
chr1 (263-306)||(15392095-15392138)
chr1 (260-295)||(19809960-19809995)
chr1 (255-306)||(21428049-21428100)
chr1 (251-306)||(38870940-38870995)
chr1 (255-306)||(48558312-48558363)
chr1 (196-297)||(51722255-51722358)
chr1 (255-306)||(52846840-52846891)
chr1 (260-306)||(2997047-2997093)
chr1 (264-306)||(9380971-9381013)
chr1 (196-297)||(12287850-12287952)
chr1 (244-306)||(26366824-26366885)
chr1 (194-295)||(28509389-28509491)
chr1 (196-297)||(29228677-29228779)
chr1 (194-295)||(29383625-29383727)
chr1 (196-293)||(30604464-30604562)
chr1 (252-305)||(22892680-22892733)
chr1 (202-306)||(38871146-38871251)
chr1 (234-306)||(43361543-43361616)
[»] chr2 (55 HSPs)
chr2 (21-300)||(30160154-30160434)
chr2 (91-304)||(901813-902034)
chr2 (97-300)||(30156111-30156315)
chr2 (98-291)||(15061271-15061469)
chr2 (159-306)||(29923265-29923411)
chr2 (97-300)||(25286257-25286468)
chr2 (97-291)||(2333364-2333559)
chr2 (21-144)||(901687-901810)
chr2 (97-189)||(10429679-10429769)
chr2 (184-306)||(21214192-21214315)
chr2 (184-306)||(43195774-43195897)
chr2 (184-306)||(23054316-23054439)
chr2 (97-181)||(39596804-39596888)
chr2 (184-302)||(3976466-3976585)
chr2 (97-247)||(35249745-35249887)
chr2 (202-306)||(32667191-32667296)
chr2 (234-306)||(42768325-42768398)
chr2 (195-306)||(25441697-25441809)
chr2 (187-305)||(11969045-11969164)
chr2 (234-310)||(17727444-17727521)
chr2 (187-302)||(3976998-3977114)
chr2 (184-303)||(10849485-10849605)
chr2 (196-299)||(28193333-28193437)
chr2 (184-306)||(6183357-6183480)
chr2 (184-306)||(18901855-18901978)
chr2 (184-290)||(21213892-21213999)
chr2 (255-306)||(29101813-29101864)
chr2 (255-306)||(31761393-31761444)
chr2 (255-306)||(33985762-33985813)
chr2 (184-306)||(43169232-43169355)
chr2 (252-306)||(5424773-5424827)
chr2 (196-297)||(15962157-15962259)
chr2 (234-311)||(20998975-20999053)
chr2 (196-297)||(39420699-39420801)
chr2 (251-295)||(93140-93184)
chr2 (255-306)||(93726-93777)
chr2 (228-306)||(10429773-10429852)
chr2 (255-306)||(12431960-12432011)
chr2 (256-295)||(14408052-14408091)
chr2 (21-94)||(29923427-29923497)
chr2 (255-306)||(34775419-34775470)
chr2 (209-295)||(38760319-38760406)
chr2 (255-306)||(40010036-40010087)
chr2 (195-305)||(43688413-43688524)
chr2 (234-295)||(883890-883952)
chr2 (196-297)||(936814-936916)
chr2 (260-306)||(25621276-25621322)
chr2 (234-292)||(28895567-28895625)
chr2 (260-306)||(39108155-39108201)
chr2 (184-280)||(17509099-17509196)
chr2 (255-295)||(884119-884159)
chr2 (251-299)||(15961798-15961846)
chr2 (254-306)||(25441908-25441960)
chr2 (257-301)||(32667041-32667085)
chr2 (266-306)||(33277336-33277376)
[»] chr3 (69 HSPs)
chr3 (21-304)||(31563692-31563978)
chr3 (23-306)||(38300274-38300560)
chr3 (124-304)||(31563996-31564177)
chr3 (97-306)||(38300743-38300955)
chr3 (22-306)||(21750291-21750588)
chr3 (21-306)||(33909319-33909605)
chr3 (21-187)||(38300560-38300727)
chr3 (103-306)||(33909823-33910028)
chr3 (163-248)||(34356959-34357044)
chr3 (187-300)||(34356839-34356953)
chr3 (184-306)||(44573629-44573752)
chr3 (21-144)||(48407615-48407744)
chr3 (184-306)||(3985763-3985886)
chr3 (184-306)||(34715446-34715569)
chr3 (184-306)||(43101362-43101485)
chr3 (184-306)||(24539143-24539267)
chr3 (42-150)||(53981750-53981858)
chr3 (184-306)||(4255500-4255623)
chr3 (184-306)||(50203848-50203971)
chr3 (174-248)||(48407827-48407901)
chr3 (234-306)||(44573976-44574049)
chr3 (184-303)||(13769285-13769405)
chr3 (184-295)||(44573316-44573428)
chr3 (196-299)||(48511637-48511741)
chr3 (228-311)||(50692560-50692644)
chr3 (251-306)||(22407432-22407487)
chr3 (251-306)||(22407639-22407694)
chr3 (184-306)||(27219319-27219442)
chr3 (184-306)||(45443270-45443393)
chr3 (228-306)||(40230426-40230504)
chr3 (255-308)||(4191111-4191164)
chr3 (234-306)||(50692363-50692436)
chr3 (184-295)||(54369029-54369141)
chr3 (255-306)||(9264077-9264128)
chr3 (255-306)||(9264284-9264335)
chr3 (255-306)||(11414425-11414476)
chr3 (255-306)||(19820519-19820570)
chr3 (228-306)||(40230630-40230709)
chr3 (184-306)||(41380714-41380836)
chr3 (255-306)||(51338394-51338445)
chr3 (255-306)||(51642419-51642470)
chr3 (255-306)||(51642626-51642677)
chr3 (234-295)||(9179173-9179235)
chr3 (196-297)||(10856626-10856728)
chr3 (234-299)||(36020856-36020922)
chr3 (260-306)||(38422050-38422096)
chr3 (97-147)||(48407753-48407803)
chr3 (194-294)||(10453706-10453807)
chr3 (234-302)||(39078766-39078835)
chr3 (234-306)||(39956665-39956738)
chr3 (263-306)||(4255989-4256032)
chr3 (255-306)||(21832190-21832241)
chr3 (228-306)||(35011898-35011977)
chr3 (260-295)||(40337878-40337913)
chr3 (229-292)||(45941138-45941201)
chr3 (251-306)||(50057087-50057142)
chr3 (260-306)||(4029635-4029681)
chr3 (264-306)||(48685303-48685345)
chr3 (234-295)||(49477574-49477636)
chr3 (260-306)||(50338373-50338419)
chr3 (234-306)||(21833564-21833637)
chr3 (234-306)||(22339781-22339854)
chr3 (251-300)||(48407543-48407592)
chr3 (228-304)||(53761391-53761468)
chr3 (251-291)||(14170005-14170045)
chr3 (255-303)||(42258972-42259020)
chr3 (196-299)||(48511408-48511512)
chr3 (255-295)||(49477389-49477429)
chr3 (116-156)||(50095138-50095178)
[»] chr4 (72 HSPs)
chr4 (100-306)||(27048399-27048606)
chr4 (97-300)||(41176602-41176813)
chr4 (97-300)||(21497680-21497891)
chr4 (97-300)||(21498083-21498294)
chr4 (113-306)||(27048128-27048327)
chr4 (97-306)||(34206246-34206452)
chr4 (111-306)||(34205984-34206176)
chr4 (97-300)||(38908013-38908224)
chr4 (91-282)||(7193560-7193759)
chr4 (21-144)||(21497900-21498023)
chr4 (97-222)||(51564816-51564941)
chr4 (184-306)||(15665143-15665266)
chr4 (184-306)||(36558457-36558580)
chr4 (184-306)||(51469471-51469594)
chr4 (184-306)||(53740172-53740295)
chr4 (184-306)||(13254373-13254496)
chr4 (184-306)||(29669354-29669476)
chr4 (184-310)||(56509599-56509726)
chr4 (184-306)||(50858318-50858438)
chr4 (97-157)||(28085636-28085696)
chr4 (184-306)||(29669669-29669791)
chr4 (184-306)||(45426927-45427050)
chr4 (184-306)||(45427243-45427366)
chr4 (184-306)||(50858002-50858125)
chr4 (228-306)||(52214649-52214728)
chr4 (185-306)||(43972346-43972468)
chr4 (185-306)||(51470474-51470596)
chr4 (234-306)||(5488407-5488480)
chr4 (202-309)||(52827221-52827328)
chr4 (184-306)||(990537-990660)
chr4 (184-306)||(991194-991317)
chr4 (184-306)||(22867074-22867197)
chr4 (184-306)||(23018460-23018583)
chr4 (184-306)||(29734551-29734674)
chr4 (196-297)||(2016534-2016636)
chr4 (113-182)||(20545785-20545854)
chr4 (229-294)||(28496508-28496573)
chr4 (196-299)||(11290171-11290275)
chr4 (21-107)||(27048300-27048383)
chr4 (200-283)||(28085700-28085784)
chr4 (187-306)||(48843008-48843128)
chr4 (97-144)||(7193510-7193557)
chr4 (228-306)||(25753596-25753675)
chr4 (255-306)||(28395239-28395290)
chr4 (255-306)||(35399248-35399299)
chr4 (255-306)||(35399407-35399458)
chr4 (184-306)||(53739856-53739979)
chr4 (228-306)||(56511538-56511617)
chr4 (251-305)||(18435918-18435972)
chr4 (260-302)||(27634321-27634363)
chr4 (234-295)||(35269051-35269113)
chr4 (196-297)||(46528923-46529025)
chr4 (234-306)||(12016674-12016747)
chr4 (234-306)||(12016882-12016955)
chr4 (234-306)||(29113489-29113562)
chr4 (234-306)||(43943713-43943786)
chr4 (251-295)||(26942874-26942918)
chr4 (21-107)||(34206147-34206230)
chr4 (255-306)||(6778667-6778718)
chr4 (255-302)||(21498593-21498640)
chr4 (235-306)||(35565120-35565190)
chr4 (255-306)||(53386103-53386154)
chr4 (228-306)||(56511331-56511410)
chr4 (260-306)||(17077135-17077181)
chr4 (196-297)||(33912045-33912147)
chr4 (255-297)||(39110779-39110821)
chr4 (264-306)||(51470715-51470757)
chr4 (69-106)||(20545828-20545865)
chr4 (234-306)||(28245828-28245901)
chr4 (255-304)||(40197272-40197321)
chr4 (255-299)||(6778464-6778508)
chr4 (266-306)||(17076931-17076971)
[»] chr5 (50 HSPs)
chr5 (97-306)||(12965237-12965447)
chr5 (184-304)||(38663237-38663358)
chr5 (184-304)||(29432402-29432523)
chr5 (184-306)||(13843687-13843810)
chr5 (184-306)||(27760065-27760188)
chr5 (184-306)||(38131754-38131877)
chr5 (184-310)||(24918154-24918278)
chr5 (98-223)||(35750418-35750542)
chr5 (184-303)||(37995628-37995748)
chr5 (184-306)||(873687-873810)
chr5 (184-306)||(24994062-24994182)
chr5 (234-306)||(34457136-34457209)
chr5 (192-299)||(14769830-14769938)
chr5 (184-304)||(30588047-30588164)
chr5 (184-306)||(1028084-1028207)
chr5 (196-297)||(29396343-29396445)
chr5 (234-306)||(13413624-13413697)
chr5 (234-306)||(34457343-34457416)
chr5 (255-306)||(2908760-2908811)
chr5 (184-306)||(13844003-13844126)
chr5 (255-306)||(28358026-28358077)
chr5 (234-312)||(35526973-35527052)
chr5 (251-293)||(395036-395078)
chr5 (260-306)||(3762973-3763019)
chr5 (16-104)||(4465080-4465165)
chr5 (184-293)||(17016097-17016207)
chr5 (196-297)||(33040472-33040574)
chr5 (260-306)||(40169032-40169078)
chr5 (97-142)||(14029002-14029047)
chr5 (234-306)||(28156070-28156143)
chr5 (255-312)||(35527259-35527316)
chr5 (255-306)||(48302-48353)
chr5 (184-306)||(4465176-4465299)
chr5 (255-306)||(24125124-24125175)
chr5 (255-306)||(36878388-36878439)
chr5 (255-302)||(38376793-38376840)
chr5 (251-306)||(39205656-39205710)
chr5 (234-295)||(48106-48168)
chr5 (114-152)||(13843890-13843928)
chr5 (196-297)||(22196326-22196428)
chr5 (254-295)||(1892092-1892133)
chr5 (234-306)||(20720346-20720419)
chr5 (265-306)||(36878565-36878606)
chr5 (255-304)||(43490209-43490258)
chr5 (251-295)||(2716604-2716648)
chr5 (266-306)||(3015408-3015448)
chr5 (251-295)||(18541780-18541824)
chr5 (267-303)||(30769862-30769898)
chr5 (255-295)||(37656734-37656774)
chr5 (262-306)||(40168850-40168894)
[»] chr7 (53 HSPs)
chr7 (25-293)||(12524968-12525233)
chr7 (97-303)||(48116290-48116488)
chr7 (91-306)||(12578451-12578677)
chr7 (97-306)||(12524440-12524650)
chr7 (21-306)||(12524666-12524948)
chr7 (97-282)||(14690979-14691161)
chr7 (91-303)||(12518164-12518387)
chr7 (21-122)||(13788746-13788844)
chr7 (184-292)||(37272050-37272159)
chr7 (184-303)||(43288254-43288374)
chr7 (92-205)||(12494464-12494577)
chr7 (184-302)||(7135238-7135357)
chr7 (184-306)||(28910022-28910145)
chr7 (184-308)||(257256-257381)
chr7 (184-308)||(29780137-29780262)
chr7 (196-297)||(47346094-47346196)
chr7 (184-304)||(43288522-43288643)
chr7 (184-306)||(1663595-1663718)
chr7 (225-308)||(40703400-40703484)
chr7 (196-295)||(43384282-43384382)
chr7 (184-306)||(1661182-1661305)
chr7 (234-306)||(6783078-6783151)
chr7 (253-306)||(41670893-41670946)
chr7 (22-104)||(43288394-43288473)
chr7 (255-306)||(23396671-23396722)
chr7 (267-306)||(31357665-31357704)
chr7 (184-306)||(40121609-40121732)
chr7 (196-297)||(47346323-47346425)
chr7 (184-304)||(6959959-6960080)
chr7 (251-296)||(19843541-19843586)
chr7 (196-292)||(19843709-19843806)
chr7 (234-293)||(27729478-27729538)
chr7 (228-306)||(6813069-6813148)
chr7 (251-306)||(8585149-8585204)
chr7 (184-306)||(43167884-43168007)
chr7 (260-306)||(28910232-28910278)
chr7 (196-297)||(33909139-33909241)
chr7 (253-295)||(36092394-36092436)
chr7 (196-297)||(36495891-36495993)
chr7 (255-308)||(8682095-8682148)
chr7 (234-302)||(9378833-9378902)
chr7 (257-306)||(23821667-23821716)
chr7 (234-306)||(31374805-31374878)
chr7 (194-294)||(37530926-37531027)
chr7 (252-305)||(40703644-40703697)
chr7 (234-306)||(44760499-44760571)
chr7 (234-293)||(14991513-14991573)
chr7 (234-293)||(15421124-15421184)
chr7 (262-306)||(23396883-23396927)
chr7 (114-154)||(30296506-30296546)
chr7 (260-296)||(32000884-32000920)
chr7 (255-303)||(40792806-40792854)
chr7 (235-295)||(43295481-43295541)
[»] chr8 (42 HSPs)
chr8 (99-306)||(43984307-43984522)
chr8 (60-306)||(7622170-7622407)
chr8 (21-151)||(7622023-7622150)
chr8 (97-306)||(7621805-7622007)
chr8 (43-136)||(21505089-21505182)
chr8 (128-222)||(9091228-9091322)
chr8 (184-304)||(34248349-34248470)
chr8 (58-191)||(3537772-3537904)
chr8 (194-302)||(34248077-34248186)
chr8 (184-306)||(18905846-18905969)
chr8 (184-306)||(32931391-32931514)
chr8 (184-306)||(21085139-21085262)
chr8 (251-306)||(36993938-36993993)
chr8 (228-306)||(36997200-36997279)
chr8 (228-308)||(36037224-36037305)
chr8 (196-297)||(35908680-35908782)
chr8 (234-306)||(10989025-10989098)
chr8 (234-306)||(10989232-10989305)
chr8 (234-306)||(43599351-43599424)
chr8 (97-145)||(36994095-36994143)
chr8 (174-226)||(43984116-43984168)
chr8 (255-306)||(16454626-16454677)
chr8 (184-306)||(20298507-20298630)
chr8 (251-302)||(21653862-21653913)
chr8 (21-76)||(43984236-43984291)
chr8 (192-297)||(17607214-17607320)
chr8 (234-306)||(3183902-3183975)
chr8 (234-306)||(15011020-15011093)
chr8 (234-306)||(20760651-20760724)
chr8 (96-221)||(38074078-38074203)
chr8 (234-306)||(40902384-40902457)
chr8 (97-146)||(43984531-43984580)
chr8 (184-303)||(23027822-23027942)
chr8 (255-302)||(8559643-8559690)
chr8 (260-299)||(13655182-13655221)
chr8 (260-299)||(13713824-13713863)
chr8 (255-306)||(15010812-15010863)
chr8 (251-306)||(21653385-21653440)
chr8 (228-306)||(30176455-30176534)
chr8 (234-292)||(42228811-42228870)
chr8 (234-306)||(3538058-3538132)
chr8 (260-296)||(44440954-44440990)
[»] chr6 (33 HSPs)
chr6 (149-300)||(1468917-1469068)
chr6 (114-212)||(28072003-28072100)
chr6 (73-197)||(1469155-1469286)
chr6 (25-132)||(18779573-18779679)
chr6 (184-302)||(10418333-10418452)
chr6 (184-306)||(24055100-24055223)
chr6 (123-248)||(28072522-28072647)
chr6 (222-304)||(27914319-27914402)
chr6 (184-304)||(8144008-8144128)
chr6 (184-306)||(1744833-1744956)
chr6 (184-306)||(19054483-19054606)
chr6 (228-306)||(28149827-28149906)
chr6 (260-306)||(19712395-19712441)
chr6 (252-305)||(10733430-10733483)
chr6 (234-306)||(16877001-16877074)
chr6 (235-306)||(17147896-17147968)
chr6 (184-306)||(12134474-12134597)
chr6 (255-306)||(16876821-16876872)
chr6 (184-306)||(21067048-21067171)
chr6 (184-306)||(21088839-21088962)
chr6 (252-306)||(12124695-12124749)
chr6 (185-306)||(30539226-30539348)
chr6 (234-306)||(15101102-15101175)
chr6 (184-295)||(31875-31987)
chr6 (255-306)||(11313373-11313424)
chr6 (184-294)||(19753607-19753718)
chr6 (255-306)||(24558645-24558696)
chr6 (255-306)||(24558850-24558901)
chr6 (260-298)||(23591596-23591634)
chr6 (196-297)||(25184212-25184314)
chr6 (97-186)||(5556974-5557062)
chr6 (234-302)||(19712604-19712673)
chr6 (251-295)||(18286656-18286700)
[»] scaffold0054 (1 HSPs)
scaffold0054 (234-306)||(21254-21327)
[»] scaffold1138 (2 HSPs)
scaffold1138 (251-306)||(1864-1919)
scaffold1138 (255-303)||(2073-2121)
[»] scaffold0729 (2 HSPs)
scaffold0729 (255-306)||(2538-2589)
scaffold0729 (255-299)||(2748-2792)
[»] scaffold0989 (1 HSPs)
scaffold0989 (234-306)||(2938-3011)
[»] scaffold0434 (1 HSPs)
scaffold0434 (234-306)||(13346-13419)
[»] scaffold0029 (1 HSPs)
scaffold0029 (234-302)||(76892-76961)


Alignment Details
Target: chr1 (Bit Score: 539; Significance: 0; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 16 - 638
Target Start/End: Original strand, 38739719 - 38740343
Alignment:
Q  16 gagtttatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgcccc--g 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||  |    
T  38739719 gagtttatccaagatctaccgttgtcgggattccgcattacgatgcttcatgcccattgggtctgagcgtgagggggtgtattggaaatcccaccccccg 38739818  T
Q  114 agcgtgagggggtgtgttggtaatcccacc-ttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatc 212  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38739819 agcgtgagggggtgtgttggtaatcccacccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatc 38739918  T
Q  213 agttagataggaagattgattagagtttatgaagagatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaatagtga 312  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||||    
T  38739919 agttagataggaagattgatcagagtttatgaagaggtgcactcctcaccttacaagccaattttgtaagggtgaattagacctcaaatttcaatagtga 38740018  T
Q  313 agacagcggtcggagttaattggatgtggtgaaggatcgcattgctacttggcgaagggttatgtttttatatttttgttaagactaagaactcttaagc 412  Q
    |||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38740019 agacagcgttcagagttaattggatgtggtgaaggatcacattgctacttggcgaagggttatgtttttatatttttgt-aagactaagaactcttaagc 38740117  T
Q  413 tcaagccaacaagagttttagtgatttaaaagagttagtggtttagccgaagttgagaatgtacctttcactaaagattataagccttttaaaaatgaca 512  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38740118 tcaagccaacaagagttttagtgttttaaaagagttagtggtttagccgaagttgagaatgtacctttcactaaagattataagccttttaaaaatgaca 38740217  T
Q  513 tgtaaggaacgatttgttcacatatatctcgatgtaatttattaccaatcaacgtataattgatatcaaaaggtcgtgatttgttcccagaaatttatct 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38740218 tgtaaggaacgatttgttcacatatatctcgatgtaatttattaccaatcagcgtataattgatatcaaaaggtcgtgatttgttcccagaaatttatct 38740317  T
Q  613 aatacattgatggacacggtgttact 638  Q
    |||||||||||||||| |||||||||    
T  38740318 aatacattgatggacagggtgttact 38740343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 21 - 306
Target Start/End: Complemental strand, 19481669 - 19481383
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtga 120  Q
    ||||||||||||||| || ||||||||||||||| | |||||  ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  19481669 tatccaagatctaccattttcgggattccgcattgccacgctccatgcccattgggtctgagcgtgagggggtgtgttggaaaccctgccccgagcgtga 19481570  T
Q  121 gggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagat 220  Q
    ||| |||||||||||||| ||||||||||| ||| || ||||||||| ||| |||||||||||||||||| | |||||||||||| |||| | |||||||    
T  19481569 gggtgtgtgttggtaatctcaccttaattgcgatctgcccctagttgtcttgtgttggcttgtctttgagagggtggatttagtcccacaacggttagat 19481470  T
Q  221 aggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||| ||||| ||||||||| ||||| | |||||||  ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  19481469 aggaagcttgatcagagtttataaagagtaggcactccaaaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 19481383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 97 - 306
Target Start/End: Complemental strand, 21638468 - 21638257
Alignment:
Q  97 ttggaaatcccgccc-cgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagt 195  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | ||    
T  21638468 ttggaaatcccgccctcgaccgtgagggggtgtgttggtaatcccaccttaattgtgatctgcccctagttgccttatgttggcttgtctttgagagggt 21638369  T
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| | |||| ||||||||||||| ||||| ||||||||| |||| ||  ||||||| ||||||||||  | |||||||||| ||||||||||    
T  21638368 ggatttagtcccgcatcggttagataggaagcttgatcagagtttataaagaggagacactcctcaccttacaagatggttttgtaaggatgagttaggc 21638269  T
Q  295 ctcaaatttcaa 306  Q
    | ||||||||||    
T  21638268 cccaaatttcaa 21638257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 97 - 306
Target Start/End: Complemental strand, 2104461 - 2104252
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||| |||||||| ||| || ||| |||||||||||||||||||||||||||||| |||    
T  2104461 ttggaaatcccgccccgaacgtgagggggtgggttggtaattccatcttaattgcgatctgccccgagttgccttatgttggcttgtctttgagggggtg 2104362  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| |||||| ||||||||||||| ||||| ||||||| | |||| || |||||||| ||||||||||||| |||||||||| |||||||||||    
T  2104361 gatttagtcccacatcggttagataggaagcttgatcagagtttgtaaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 2104262  T
Q  296 tcaaatttcaa 306  Q
     ||||||||||    
T  2104261 -caaatttcaa 2104252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 97 - 306
Target Start/End: Original strand, 482585 - 482796
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttga-gggagt 195  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| || ||||||||||||||||||||||||||||||| ||| ||    
T  482585 ttggaaatcccgccccgagcgtgagggggtgtgt-ggtaatcccaccttgattgcgatctgcccctagttgccttatgttggcttgtctttgaggggggt 482683  T
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagcc-gattttgtaagggtgagttagg 293  Q
    |||||||||| |||||| || |||||||||| ||||| ||||||||| |||| || ||||||||   |||||||||| | |||| ||||| |||||||||    
T  482684 ggatttagtcccacatcggtcagataggaagcttgatcagagtttataaagaggaggcactcctcctcttacaagccgggttttttaaggatgagttagg 482783  T
Q  294 cctcaaatttcaa 306  Q
    || ||||||||||    
T  482784 ccccaaatttcaa 482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 97 - 248
Target Start/End: Original strand, 19481222 - 19481373
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| || ||||||||||||| |||||||||||||||||||| |||    
T  19481222 ttggaaatcccgccccgagtgtgagggggtgtgttggtaatcccaccttaattgcgatctgcccctagttgccttgtgttggcttgtctttgagggggtg 19481321  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaagag 248  Q
    ||||||||| ||||||||||||||  |||| ||||| ||||||||| |||||    
T  19481322 gatttagtcccacatcagttagattagaagcttgatcagagtttataaagag 19481373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 97 - 242
Target Start/End: Original strand, 15985192 - 15985337
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||| || || |||    
T  15985192 ttggaaaccccgccccgggcgtgaggaggtgtgttggtaatcccaccttaattgtgatcttcccctagttgccttatgttggcttgtcttcgaaggggtg 15985291  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttat 242  Q
    ||||||||| |||||| |||||||| |||| |||||||||||||||    
T  15985292 gatttagtcccacatctgttagataagaagcttgattagagtttat 15985337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 97 - 300
Target Start/End: Complemental strand, 11149631 - 11149420
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaat-------tgtgatttggccctagttgccttatgttggcttgtctttga 189  Q
    ||||||||||||||||||  ||||||||||| ||||||||| |||||||||        || ||| || ||| ||||| |||||||||||||||||||||    
T  11149631 ttggaaatcccgccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgtcttatgttggcttgtctttga 11149532  T
Q  190 gggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgag 288  Q
    ||| |||||||||||| |||||| |||| || ||||| ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||||| ||||    
T  11149531 gggggtggatttagtcccacatcggttacattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgag 11149432  T
Q  289 ttaggcctcaaa 300  Q
    ||||||| ||||    
T  11149431 ttaggccccaaa 11149420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 128 - 304
Target Start/End: Original strand, 40664144 - 40664321
Alignment:
Q  128 tgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagataggaaga 227  Q
    |||| ||||||||||||||| ||  || || ||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||||       
T  40664144 tgttagtaatcccaccttaagtgcaatctgcccctagttgccttgtgttggcttgactttgagggggtggatttagtctcacatcggttagataggactc 40664243  T
Q  228 ttgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttc 304  Q
    ||||| ||||||||| |||| || ||||||||  |||||||||||| |||||||||| || ||||| || ||||||||    
T  40664244 ttgataagagtttataaagaggaggcactcctcgccttacaagccggttttgtaaggatgtgttagaccccaaatttc 40664321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 97 - 248
Target Start/End: Complemental strand, 14368959 - 14368809
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||||||| |||| || |||||||||||||||||||||||||||||||||| ||| ||  |  ||||||||| |||||||||||||||||||| |||    
T  14368959 ttggaaatccctccccaagagtgagggggtgtgttggtaatcccaccttaattgcgatctgctctcagttgccttgtgttggcttgtctttgaggg-gtg 14368861  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaagag 248  Q
    ||||||||||  |||| ||||||||||| | ||||| ||||||||| |||||    
T  14368860 gatttagtcttgcatcggttagataggacgcttgataagagtttataaagag 14368809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 97 - 272
Target Start/End: Original strand, 40367471 - 40367654
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaat-------tgtgatttggccctagttgccttatgttggcttgtctttga 189  Q
    ||||||||||| ||||||  ||||||||||| ||||||||| |||||||||        || ||| || ||| ||||||||||||||||||||||||||     
T  40367471 ttggaaatcccaccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttgc 40367570  T
Q  190 gggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccg 272  Q
    ||| |||||||||||| |||||| |||| || ||||| ||||| ||||||||| |||| || |||||||| |||||||||||||    
T  40367571 gggggtggatttagtcccacatcggttaaattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccg 40367654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 97 - 304
Target Start/End: Complemental strand, 35024655 - 35024453
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||| |||| ||| || ||||| || |||| ||||||     ||||||||| | |    
T  35024655 ttggaaatcccaccccaagcgtgagggggtgtgttggtaatcccacctttattgcgatctgcccctaattaccttgtgttgg-----ctttgagggggcg 35024561  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    || |||||| |||||  |||||||||||   ||||| || |||||| || | || |||||||| ||||||||||||| |||||||||| || ||||||||    
T  35024560 gaattagtcccacattggttagataggactcttgataag-gtttataaacaggaggcactcctcaccttacaagccggttttgtaaggatgggttaggcc 35024462  T
Q  296 tcaaatttc 304  Q
     ||||||||    
T  35024461 ccaaatttc 35024453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 92 - 248
Target Start/End: Complemental strand, 463363 - 463200
Alignment:
Q  92 gtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaat-------tgtgatttggccctagttgccttatgttggcttgtc 184  Q
    |||| ||||||||||||||| ||   |||||||||| ||||||||| |||||||||        || ||| || ||| ||||||||||||||||||||||    
T  463363 gtgtgttggaaatcccgccctgaatatgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtc 463264  T
Q  185 tttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag 248  Q
    |||||||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||||    
T  463263 tttgagggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagag 463200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 463194 - 463080
Alignment:
Q  187 tgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggt 285  Q
    |||||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| |    
T  463194 tgagggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggat 463095  T
Q  286 gagttaggcctcaaa 300  Q
    |||||||||| ||||    
T  463094 gagttaggccccaaa 463080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 16 - 139
Target Start/End: Original strand, 35892385 - 35892504
Alignment:
Q  16 gagtttatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgag 115  Q
    |||| |||||||||||||| ||||   |||||||||||| | || ||| |||||||||||| | |||||||||| | ||| |||||||||||||||||||    
T  35892385 gagtctatccaagatctactgttg---ggattccgcattgccacacttcatgcccattgggcc-gagcgtgaggagttgtgttggaaatcccgccccgag 35892480  T
Q  116 cgtgagggggtgtgttggtaatcc 139  Q
    |||||| |||||||||||||||||    
T  35892481 cgtgagagggtgtgttggtaatcc 35892504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 4022239 - 4022116
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||  |||||||||    
T  4022239 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaag 4022140  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  4022139 gatgagttaggccccaaatttcaa 4022116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 35891890 - 35892013
Alignment:
Q  58 acgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttg 157  Q
    |||||| ||||||||| ||||||||||||| ||| | | ||| |||||  |||||||||||||  || |||||||||||||||||||| ||||||||||     
T  35891890 acgcttcatgcccatttggtctgagcgtgaagggatctgttgaaaatcatgccccgagcgtgaaaggatgtgttggtaatcccacctttattgtgatttt 35891989  T
Q  158 gccctagttgccttatgttggctt 181  Q
     || | |||||||| |||||||||    
T  35891990 cccttcgttgccttgtgttggctt 35892013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 2697445 - 2697322
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  2697445 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 2697346  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    |  ||||||| || ||||||||||    
T  2697345 gacgagttagaccccaaatttcaa 2697322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 17419777 - 17419900
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  17419777 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 17419876  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||||| || ||||||||||    
T  17419877 gatgagttagaccccaaatttcaa 17419900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 20735512 - 20735635
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||||||||| || |||||||| ||||||| |   ||||  ||| ||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  20735512 ctttgagggggtggatttaatcccacatcagatagatagtactcttgagaagaatttataaagaggaggcactcctcaccttacaagccggttttgtaag 20735611  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  20735612 gatgagttaggccccaaatttcaa 20735635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 31305701 - 31305824
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  31305701 ctttgagggggtggatttagtcccacatccgatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 31305800  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||  ||||||||||    
T  31305801 gatgagttaggctccaaatttcaa 31305824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 173 - 280
Target Start/End: Complemental strand, 13357042 - 13356933
Alignment:
Q  173 tgttggcttgtctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga--gatgcactccttaccttacaagc 270  Q
    ||||||||||||| | |||| ||||||||||||||||||| |||||||| || | ||||| ||||||||| || |  || |||||||| |||||||||||    
T  13357042 tgttggcttgtctgtaagggggtggatttagtctcacatcggttagatatgacgcttgataagagtttataaaaaaggaggcactcctaaccttacaagc 13356943  T
Q  271 cgattttgta 280  Q
    || |||||||    
T  13356942 cggttttgta 13356933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 40367715 - 40367788
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtg 94  Q
    |||||| |||||||||||||| |||||||||||| | |||||| ||||| |||||| |||||||||||||||||    
T  40367715 tatccaggatctaccgttgtcaggattccgcattgccacgcttcatgccgattgggcctgagcgtgagggggtg 40367788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 8520207 - 8520084
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| |||| || |||||||| ||||||||||||| ||||||||     
T  8520207 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaagaggcactcctcaccttacaagccggttttgtaaa 8520108  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||||| || ||||||||||    
T  8520107 gatgagttagaccccaaatttcaa 8520084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 20735794 - 20735868
Alignment:
Q  233 tagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  20735794 tagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaagcctcaaatttcaa 20735868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 45403480 - 45403553
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | |||||||| ||||||||||| | |||||||||| ||||||||||||||||||||||    
T  45403480 agagtttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagttaggcctcaaatttcaa 45403553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 15392166 - 15392217
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  15392166 tcctcaccttacaagccgattttgtaaggatgagttaggccccaaatttcaa 15392217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 19937157 - 19937046
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    |||||| || |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  19937157 ctttgatggggtggatttagtcccacatcggatagatagaattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 19937058  T
Q  283 ggtgagttaggc 294  Q
    | ||||||||||    
T  19937057 gatgagttaggc 19937046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 29272949 - 29272898
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  29272949 tcctcaccttacaagccggttttgtaaggatgagttaggcctcaaatttcaa 29272898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 33879892 - 33879769
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatgc-actccttaccttacaagccgattttgtaag 282  Q
    ||||||| | |||||||||||| |||||||| || |||| |   ||||  ||||||||| |||||  || |||||| ||||||||||| | |||||||||    
T  33879892 ctttgagagggtggatttagtcccacatcagatatatagcactcttgagaagagtttataaagaggagccactcctcaccttacaagctggttttgtaag 33879793  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  33879792 gatgagttaggccccaaatttcaa 33879769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 33964363 - 33964486
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatgc-actccttaccttacaagccgattttgtaag 282  Q
    ||||||| | |||||||||||| |||||||| || |||| |   ||||  ||||||||| |||||  || |||||| ||||||||||| | |||||||||    
T  33964363 ctttgagagggtggatttagtcccacatcagatatatagcactcttgagaagagtttataaagaggagccactcctcaccttacaagctggttttgtaag 33964462  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  33964463 gatgagttaggccccaaatttcaa 33964486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 36332152 - 36332214
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| ||||| |||||||||| ||||||||||||| |||||||||| |||||||||||    
T  36332152 agagtttataaagaggatgcactcctcaccttacaagccggttttgtaaggatgagttaggcc 36332214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 45264653 - 45264775
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatgcactccttaccttacaagccgattttgtaagg 283  Q
    ||||||||| |||||||||||| ||| ||   |||||||||   ||||| ||||||||| ||  |  |||||||| ||||||||||||| ||||||||||    
T  45264653 ctttgagggggtggatttagtcccacgtcgaatagataggactcttgataagagtttataaaaggcggcactcctcaccttacaagccggttttgtaagg 45264752  T
Q  284 gtgagttaggcctcaaatttcaa 306  Q
     |||||||  || ||||||||||    
T  45264753 atgagttaatccccaaatttcaa 45264775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 196 - 296
Target Start/End: Original strand, 38474285 - 38474386
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    ||||||||||  ||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||||||||    
T  38474285 ggatttagtcctacatcggatagataggattcttgacaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggc 38474384  T
Q  295 ct 296  Q
    ||    
T  38474385 ct 38474386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 22892506 - 22892422
Alignment:
Q  225 agattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaata 308  Q
    |||| ||| ||||||||| ||||| | |||||||| |||| |||| ||| |||||||||| ||||||||||| ||||||||||||    
T  22892506 agatagatgagagtttataaagaggaggcactcctcacctcacaatccggttttgtaaggatgagttaggccccaaatttcaata 22892422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 43423269 - 43423389
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||||||||| || |||||| | ||||||  |   ||||  ||||||||| ||||| | |||||||| ||||||||||||  |||||||||    
T  43423269 ctttgagggggtggatttattcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaag 43423368  T
Q  283 ggtgagttaggcctcaaattt 303  Q
    | ||||||||||| |||||||    
T  43423369 gatgagttaggccccaaattt 43423389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 29273108 - 29273057
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  29273108 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 29273057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 29273267 - 29273216
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  29273267 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 29273216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 35926294 - 35926239
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| ||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  35926294 gcactcctcaccttacaagctggttttgtaaggatgagttaggccccaaatttcaa 35926239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 17294980 - 17295082
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| ||| ||||||||| ||||||| || ||||||||||    
T  17294980 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggc 17295079  T
Q  295 ctc 297  Q
    |||    
T  17295080 ctc 17295082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 29228450 - 29228552
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||| | |||||| | ||||||||||  ||||  ||||||||| ||||| | |||||||| ||| ||||||||| ||||||| || ||||||||||    
T  29228450 ggatttagacccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggc 29228549  T
Q  295 ctc 297  Q
    |||    
T  29228550 ctc 29228552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 45443222 - 45443324
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | |||||||||   ||||  ||||||||| |||| || |||||||| ||| ||||||||| |||||||||| | ||||||||    
T  45443222 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagatgaggcactcctaaccgtacaagccggttttgtaaggttcagttaggc 45443321  T
Q  295 ctc 297  Q
    |||    
T  45443322 ctc 45443324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 39649148 - 39649075
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||| ||| ||||||||||    
T  39649148 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttatgccccaaatttcaa 39649075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 40367814 - 40367921
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaa-------ttgtgatttggccctagttgccttatgttggcttgtctttga 189  Q
    ||||||||||| ||||||  ||||||||||| ||||||||| |||||||||        || ||| || ||| ||||||||||||||||||||||||||     
T  40367814 ttggaaatcccaccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttgc 40367913  T
Q  190 gggagtgg 197  Q
    ||| ||||    
T  40367914 gggggtgg 40367921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 45858657 - 45858761
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| ||| |||||| || |||| ||||| ||||||||||    
T  45858657 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagtcggttttataaggatgagttaggc 45858756  T
Q  295 ctcaa 299  Q
    |||||    
T  45858757 ctcaa 45858761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 9381161 - 9381212
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||||||||||||  ||||||||| ||||||||||| ||||||||||    
T  9381161 tcctcaccttacaagccggctttgtaaggatgagttaggccccaaatttcaa 9381212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 15013515 - 15013638
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||| ||||||||||| || || |||||| ||   ||||  | ||||||| |||||| | |||| || ||||||||||||| ||||||||     
T  15013515 ctttgagggggtgaatttagtctcatattagatagatatgactcttgagaacagtttataaagagaagacacttctcaccttacaagccggttttgtaaa 15013614  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
      ||||||||||| ||||||||||    
T  15013615 aatgagttaggccccaaatttcaa 15013638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 15392095 - 15392138
Alignment:
Q  263 ttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||    
T  15392095 ttacaagccggttttgtaaggatgagttaggccccaaatttcaa 15392138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 19809995 - 19809960
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||||||||||||||||||||||| |||||||||||    
T  19809995 accttacaagccgattttgtaaggttgagttaggcc 19809960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 21428100 - 21428049
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||||||||| ||| |||||| ||| |||||||| |||||||||||||    
T  21428100 tccttaccttacaaaccggttttgtgaggatgagttagccctcaaatttcaa 21428049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 38870995 - 38870940
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| ||||||  | ||| |||||||||| ||||||||||||||||||||||    
T  38870995 gcactcctcaccttaagaaccggttttgtaaggatgagttaggcctcaaatttcaa 38870940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 48558363 - 48558312
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||| ||| ||||||||||    
T  48558363 tcctcaccttacaagccggttttgtaaggatgagttaagccccaaatttcaa 48558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 51722255 - 51722358
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatga-agag-atgcactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
    |||||||||| |||||| | |||||||||   ||||  ||||||||| | |||| | |||||||| ||| ||||||||| |||||||||| |||||||||    
T  51722255 ggatttagtcccacatcggatagataggattcttgagaagagtttataagagaggaggcactcctcaccgtacaagccggttttgtaaggatgagttagg 51722354  T
Q  294 cctc 297  Q
    ||||    
T  51722355 cctc 51722358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 52846891 - 52846840
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||| ||| ||||||||||    
T  52846891 tcctcaccttacaagccggttttgtaaggatgagttaagccccaaatttcaa 52846840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 2997093 - 2997047
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||||||| |||||||||| ||||||||||| ||||||||||    
T  2997093 acctcacaagccggttttgtaaggatgagttaggccccaaatttcaa 2997047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 9380971 - 9381013
Alignment:
Q  264 tacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||    
T  9380971 tacaagccggttttgtaaggatgagttaggccccaaatttcaa 9381013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 12287850 - 12287952
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | |||||||||   ||||  |||| |||| ||||| | |||||||| ||| ||||||| | |||||||||| ||||||||||    
T  12287850 ggatttagtcccacatcggatagataggattcttgaaaagaggttataaagaggaggcactcctcaccgtacaagctggttttgtaaggatgagttaggc 12287949  T
Q  295 ctc 297  Q
    |||    
T  12287950 ctc 12287952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 26366885 - 26366824
Alignment:
Q  244 aagagatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||| ||| |||| ||||||||||||| |||||||||| ||||||| ||| ||||||||||    
T  26366885 aagagaggcaatcctcaccttacaagccggttttgtaaggatgagttacgcc-caaatttcaa 26366824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 295
Target Start/End: Complemental strand, 28509491 - 28509389
Alignment:
Q  194 gtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttag 292  Q
    |||||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| | ||||||   ||| ||||||||| |||||||||| ||||||||    
T  28509491 gtggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactctccaccgtacaagccggttttgtaaggatgagttag 28509392  T
Q  293 gcc 295  Q
    |||    
T  28509391 gcc 28509389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 29228677 - 29228779
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | ||||||||||  ||||  ||||||||| ||||| | |||||||| ||  |||||||||  |||||| || ||||||||||    
T  29228677 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcactgtacaagccggatttgtagggatgagttaggc 29228776  T
Q  295 ctc 297  Q
    |||    
T  29228777 ctc 29228779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 194 - 295
Target Start/End: Complemental strand, 29383727 - 29383625
Alignment:
Q  194 gtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttag 292  Q
    |||||||||||| |||||| | |||||| ||   ||||  ||||||||| ||| | | |||||||||||| ||||||||  |||||||||| ||||||||    
T  29383727 gtggatttagtcccacatcggatagataagatacttgagaagagtttataaagcggaggcactccttaccgtacaagccagttttgtaaggatgagttag 29383628  T
Q  293 gcc 295  Q
    |||    
T  29383627 gcc 29383625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 293
Target Start/End: Complemental strand, 30604562 - 30604464
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
    |||||||||| |||||| | ||||||||||  ||||  | ||||||| |||||  | ||||||||| ||||||||||| ||||||| || |||||||||    
T  30604562 ggatttagtcccacatcggatagataggaatcttgagaatagtttataaagaggagacactccttatcttacaagccggttttgtatggatgagttagg 30604464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 22892733 - 22892680
Alignment:
Q  252 cactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttca 305  Q
    |||||||  ||| |||||||| |||||||||| ||||||||||| |||||||||    
T  22892733 cactcctcgcctcacaagccggttttgtaaggatgagttaggccccaaatttca 22892680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 38871251 - 38871146
Alignment:
Q  202 agtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaa 300  Q
    |||| |||||||| |||||| ||   ||||| | ||||||| ||||| | |||||||| ||||||  | ||| |||||||||| || |||||||||||||    
T  38871251 agtcccacatcagatagataagactcttgataaaagtttataaagaggaggcactcctcaccttaagaaccggttttgtaaggatgcgttaggcctcaaa 38871152  T
Q  301 tttcaa 306  Q
    ||||||    
T  38871151 tttcaa 38871146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 43361616 - 43361543
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| |||||||| || | ||||||||    
T  43361616 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagacccccaatttcaa 43361543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 21 - 300
Target Start/End: Original strand, 30160154 - 30160434
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtga 120  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||  | ||||||||||||||||||  ||||    
T  30160154 tatccaagatctaccgttgtcgggattccgcattgccacgcttcatgcccattgggtctgagcgtgaggggggatgttggaaatcccgccccgaatgtga 30160253  T
Q  121 gggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagat 220  Q
    ||||||| ||| ||||| ||| |||||||| ||| || ||| ||| |||||||||||||||  ||||||||| |||||||||||| |||| | |||||||    
T  30160254 gggggtgggttagtaattccatcttaattgcgatctgccccaagtcgccttatgttggcttacctttgagggggtggatttagtcccacagcggttagat 30160353  T
Q  221 aggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaa 300  Q
     ||||| ||||| ||||||||| |||| || |||||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  30160354 tggaagtttgatcagagtttataaagaggaggcactccttaccttacaagccggttttgtaaggatgagttaggccccaaa 30160434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 91 - 304
Target Start/End: Original strand, 901813 - 902034
Alignment:
Q  91 ggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaat-------tgtgatttggccctagttgccttatgttggcttgt 183  Q
    ||||| ||||||||||||||||||  ||||||||||| ||||||||| |||||||||        || ||| || |||||||||||||||||||||||||    
T  901813 ggtgtgttggaaatcccgccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgcccctagttgccttatgttggcttgt 901912  T
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||| | |||||||||||  |||||| ||||||||||||| ||||| |||||||||||||| || |||||||| ||||||||||||| |||||||||    
T  901913 ctttgagagggtggatttagtgccacatcggttagataggaagcttgatcagagtttatgaagaggaagcactcctcaccttacaagccggttttgtaag 902012  T
Q  283 ggtgagttaggcctcaaatttc 304  Q
    | ||||||||||| ||||||||    
T  902013 gatgagttaggccccaaatttc 902034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 97 - 300
Target Start/End: Original strand, 30156111 - 30156315
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||||| |||||||| |||||||||||| ||| ||||| ||| |||||||||||| || ||| |||||||||||||||||||| ||||||||| |||    
T  30156111 ttggaaatctcgccccgaacgtgagggggtgggttagtaattccatcttaattgtgatctgacccgagttgccttatgttggcttgcctttgagggggtg 30156210  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| |||||| |||| || ||||| ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||||| | |||||||||    
T  30156211 gatttagtcccacatcggttatattggaagtttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggataagttaggcc 30156310  T
Q  296 tcaaa 300  Q
     ||||    
T  30156311 ccaaa 30156315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 98 - 291
Target Start/End: Complemental strand, 15061469 - 15061271
Alignment:
Q  98 tggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattg-----tgatttggccctagttgccttatgttggcttgtctttgaggg 192  Q
    ||||||||||||||||||| |||||||| |||||||||| || ||||||||||     |||| || ||||||||||||||||||||||||||||||||||    
T  15061469 tggaaatcccgccccgagcatgagggggggtgttggtaaacc-accttaattgcgatgtgatctgcccctagttgccttatgttggcttgtctttgaggg 15061371  T
Q  193 agtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagtta 291  Q
     |||||||||||| |||||| ||||||||||||| ||||| | ||||||| |||| || |||||||| ||||||||||| | |||||||||| |||||||    
T  15061370 ggtggatttagtcccacatcggttagataggaagcttgatcaaagtttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagtta 15061271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 29923265 - 29923411
Alignment:
Q  159 ccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatgcactcct 258  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||| | ||||| ||||||||| |||||  |||||| |    
T  29923265 ccctagttgccttgtgttggcttgtctttgagggggtggatttagtctcacatctgttagataggacgcttgataagagtttataaagagtggcactctt 29923364  T
Q  259 taccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
     |||||||||||||  ||||||||| ||||||||||| ||||||||||    
T  29923365 caccttacaagccg-gtttgtaaggatgagttaggccccaaatttcaa 29923411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 97 - 300
Target Start/End: Complemental strand, 25286468 - 25286257
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaat-------tgtgatttggccctagttgccttatgttggcttgtctttga 189  Q
    ||||||||||| ||||||  ||||||||||| ||||||||| |||||||||        || ||| || ||| ||||||||||||||||||||||||||     
T  25286468 ttggaaatcccaccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttgc 25286369  T
Q  190 gggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgag 288  Q
    ||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||| ||  ||||||| ||||||||||||| |||||||||| ||||    
T  25286368 gggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaaacactcctcaccttacaagccggttttgtaaggatgag 25286269  T
Q  289 ttaggcctcaaa 300  Q
    ||||||| ||||    
T  25286268 ttaggccccaaa 25286257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 97 - 291
Target Start/End: Complemental strand, 2333559 - 2333364
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||||||||||  || | ||||||||||||||||||||| |||||||||||  ||||| ||||||||||||||||||||||||| |||||||| |||    
T  2333559 ttggaaatcccgccttgaacatgagggggtgtgttggtaatcacaccttaattgcaatttgcccctagttgccttatgttggcttgtatttgagggggtg 2333460  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaagggtgagtta 291  Q
    || ||| || |||||  |||| |||| ||| ||||| | ||||||| || ||| | ||||||| ||||||||||||  |||||||||| |||||||    
T  2333459 gaattaatcccacattggttaaatagaaagcttgatcaaagtttataaaaagaagacactcctcaccttacaagccagttttgtaaggttgagtta 2333364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 901687 - 901810
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtga 120  Q
    |||||| ||||||||||||| ||||||||||||| | |||||| |||||||| ||| |||||||||||||||||| |||||||||||||||| | |||||    
T  901687 tatccaggatctaccgttgttgggattccgcattgccacgcttcatgcccatcgggcctgagcgtgagggggtgtgttggaaatcccgccccaaacgtga 901786  T
Q  121 gggggtgtgttggtaatcccacct 144  Q
    ||||||| ||||||||| ||||||    
T  901787 gggggtgggttggtaattccacct 901810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 97 - 189
Target Start/End: Original strand, 10429679 - 10429769
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttga 189  Q
    ||||||||||| |||||  |||||||| |||||||||||||||||||||||||| ||| || ||||||||||||| |||||||||||||||||    
T  10429679 ttggaaatcccaccccg--cgtgagggtgtgtgttggtaatcccaccttaattgcgatctgcccctagttgccttgtgttggcttgtctttga 10429769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 21214315 - 21214192
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| ||||| || ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  21214315 ctttgagggggtggatttagtcccacattagatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 21214216  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  21214215 gatgagttaggccccaaatttcaa 21214192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 43195774 - 43195897
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| || ||||||||| |||||||| ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  43195774 ctttgagggggtagatttagtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 43195873  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  43195874 gatgagttaggccccaaatttcaa 43195897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 23054316 - 23054439
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||||| ||||||  |   ||||  ||||||||| ||||| | |||||||| |||||||||| || |||||||||    
T  23054316 ctttgagggggtggatttagtcccacatcagatagatataactcttgagaagagtttataaagaggaggcactcctcaccttacaagacggttttgtaag 23054415  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  23054416 gatgagttaggccccaaatttcaa 23054439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 97 - 181
Target Start/End: Complemental strand, 39596888 - 39596804
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggctt 181  Q
    ||||||||||||| ||||||||||||| |||||||||||||||  |||| ||||  || || ||||||||||||| |||||||||    
T  39596888 ttggaaatcccgctccgagcgtgagggagtgtgttggtaatcctgcctttattgcaatctgcccctagttgccttgtgttggctt 39596804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 3976585 - 3976466
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||  |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  3976585 ctttgagggggtggatttagtcccacatcggatagataatattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 3976486  T
Q  283 ggtgagttaggcctcaaatt 302  Q
    | ||||||||||| ||||||    
T  3976485 gatgagttaggccccaaatt 3976466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 247
Target Start/End: Complemental strand, 35249887 - 35249745
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||||||| ||||||||||||||||||||  |||||||| || ||| |||||||| || | ||||||||||| |||||||||     |||||| |||    
T  35249887 ttggaaatcccaccccgagcgtgagggggtgt--tggtaatctcatctttattgtgatatgcctctagttgccttctgttggctt-----tgaggg-gtg 35249796  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaaga 247  Q
     | ||| ||||||||| |||||||||||   ||||| ||||||||| ||||    
T  35249795 aacttaatctcacatcggttagataggactcttgataagagtttataaaga 35249745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 32667191 - 32667296
Alignment:
Q  202 agtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaa 300  Q
    |||| |||||||| |||||| ||   ||||| |||||||||  |||| | ||| |||||||||||||||||| |||||||||| ||||||||||| ||||    
T  32667191 agtcccacatcagatagataagactcttgataagagtttatatagaggaggcaatccttaccttacaagccggttttgtaaggatgagttaggccccaaa 32667290  T
Q  301 tttcaa 306  Q
    ||||||    
T  32667291 tttcaa 32667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 42768398 - 42768325
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  42768398 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 42768325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 25441697 - 25441809
Alignment:
Q  195 tggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
    ||||||||||| |||||||| ||||||| |   ||||  ||||||||| |||||  | ||||||| ||||||||||||| |||||||||| |||||||||    
T  25441697 tggatttagtcccacatcagatagatagtactcttgagaagagtttataaagagggggcactcctcaccttacaagccggttttgtaaggatgagttagg 25441796  T
Q  294 cctcaaatttcaa 306  Q
     | ||||||||||    
T  25441797 acccaaatttcaa 25441809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 187 - 305
Target Start/End: Original strand, 11969045 - 11969164
Alignment:
Q  187 tgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggt 285  Q
    |||||| |||||||||||| ||| || | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| |    
T  11969045 tgagggggtggatttagtcccacgtcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggat 11969144  T
Q  286 gagttaggcctcaaatttca 305  Q
    ||||||||||  ||||||||    
T  11969145 gagttaggcccaaaatttca 11969164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 17727444 - 17727521
Alignment:
Q  234 agagtttatgaagagatg-cactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaatagt 310  Q
    ||||||||| |||||| | || |||| ||||||||||||| |||||||||| ||||||||||| ||||||| ||||||    
T  17727444 agagtttataaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaattttaatagt 17727521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 3977114 - 3976998
Alignment:
Q  187 tgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggt 285  Q
    |||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| |  |||||||||| |||||||||| |    
T  3977114 tgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaaattacaagccggttttgtaaggat 3977015  T
Q  286 gagttaggcctcaaatt 302  Q
    |||||||||| ||||||    
T  3977014 gagttaggccccaaatt 3976998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 10849605 - 10849485
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||| ||| |||||||||||  ||| |||| ||||||||    ||||| ||||||||| ||||| | |||||||| ||||||||||  | |||||||||    
T  10849605 ctttgtgggcgtggatttagttccacttcagatagatagggctcttgataagagtttataaagaggaggcactcctcaccttacaagttggttttgtaag 10849506  T
Q  283 ggtgagttaggcctcaaattt 303  Q
    | ||||||||||| |||||||    
T  10849505 gatgagttaggccccaaattt 10849485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 299
Target Start/End: Complemental strand, 28193437 - 28193333
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    ||||||||||||||||| | |||||||||   ||||  ||||||||| || || | |||||||| ||| |||||||||||||| ||| | ||||||||||    
T  28193437 ggatttagtctcacatcggatagataggattcttgagaagagtttataaataggaggcactcctcaccgtacaagccgattttttaaagatgagttaggc 28193338  T
Q  295 ctcaa 299  Q
    |||||    
T  28193337 ctcaa 28193333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 6183480 - 6183357
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||||||||| || |||||| | ||||||| |   ||||  ||||||||| |||||  | |||| || ||||||||||||| |||||||||    
T  6183480 ctttgagggggtggatttaatcccacatcggatagatagtactcttgagaagagtttataaagaggagacacttctcaccttacaagccggttttgtaag 6183381  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||||| || ||||||||||    
T  6183380 gatgagttagaccccaaatttcaa 6183357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 18901978 - 18901855
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||| ||   ||||  ||||||||| ||||| | |||||| | ||||||||||||  |||||||||    
T  18901978 ctttgagggggtggatttagtcccacatcggatagataagactcttgaaaagagtttataaagaggaggcactcttcaccttacaagcctgttttgtaag 18901879  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
      |||| |||||| ||||||||||    
T  18901878 aatgagataggccccaaatttcaa 18901855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 290
Target Start/End: Complemental strand, 21213999 - 21213892
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||  | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  21213999 ctttgagggggtggatttagtcccacattggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 21213900  T
Q  283 ggtgagtt 290  Q
    | ||||||    
T  21213899 gatgagtt 21213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 29101813 - 29101864
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| |||||||| |||| ||||| ||||||||||||||||||||||    
T  29101813 tccttacctcacaagccggttttataaggatgagttaggcctcaaatttcaa 29101864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 31761393 - 31761444
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  31761393 tcctcaccttacaagccgattttgtaaggatgagttaagccccaaatttcaa 31761444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 33985813 - 33985762
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  33985813 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 33985762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 43169232 - 43169355
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| |||| || |||||||| ||||| ||||||  |||||||||    
T  43169232 ctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcacctttcaagccagttttgtaag 43169331  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    |  |||||||||| || |||||||    
T  43169332 gaagagttaggccccatatttcaa 43169355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 5424827 - 5424773
Alignment:
Q  252 cactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||| ||||||||||||| |||||||||| |||||||| || ||||||||||    
T  5424827 cactcctcaccttacaagccggttttgtaaggatgagttagaccccaaatttcaa 5424773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 15962259 - 15962157
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | ||||||||||  ||||  | ||||||| ||||| | |||||||| ||| ||||||||| ||||||| || ||||||||||    
T  15962259 ggatttagtcccacatcggatagataggaatcttgagaatagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggc 15962160  T
Q  295 ctc 297  Q
    |||    
T  15962159 ctc 15962157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 311
Target Start/End: Complemental strand, 20999053 - 20998975
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaatagtg 311  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| | |||||||| ||||    
T  20999053 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcccccaatttcaacagtg 20998975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 39420699 - 39420801
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | ||||||||||  ||||  ||||||||| ||||| | |||||||| ||  ||||||||| ||||||| || ||||||||||    
T  39420699 ggatttagtcccacatcggatagataggaattttgagaagagtttataaagaggaggcactcctcacagtacaagccggttttgtacggatgagttaggc 39420798  T
Q  295 ctc 297  Q
    |||    
T  39420799 ctc 39420801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 93184 - 93140
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||    
T  93184 gcactcctcaccttacaagccggttttgtaaggatgagttaggcc 93140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 93777 - 93726
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||| |||||||| |||||| ||| ||||||||||||||||||||||    
T  93777 tcctcacctcacaagccggttttgtgaggatgagttaggcctcaaatttcaa 93726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 10429773 - 10429852
Alignment:
Q  228 ttgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| |||||  | ||||||| | ||||||||||| |||||||||| |||||||| || ||||||||||    
T  10429773 ttgataagagtttataaagaggagacactcctcatcttacaagccggttttgtaaggatgagttagaccccaaatttcaa 10429852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 12431960 - 12432011
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| |||| |||||| ||||||||||    
T  12431960 tcctcaccttacaagccggttttgtaaggatgagctaggccccaaatttcaa 12432011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 295
Target Start/End: Original strand, 14408052 - 14408091
Alignment:
Q  256 ccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  14408052 ccttaccttacaagccggttttgtaaggttgagttaggcc 14408091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 29923427 - 29923497
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtg 94  Q
    |||||||||||||||||   |||||||||||||| | || ||| | ||||||||||||||||| |||| |||||    
T  29923427 tatccaagatctaccgt---cgggattccgcattgccacacttcaggcccattgggtctgagcatgagtgggtg 29923497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 34775419 - 34775470
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  34775419 tcctcaccttacaagccggttttgtaaggatgagttaggcccccaatttcaa 34775470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 38760406 - 38760319
Alignment:
Q  209 catcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||||| |||||||||   ||||| ||||||||| ||||| | |||||| | ||||||||||||| |||||||| | |||||||||||    
T  38760406 catcaggtagataggactcttgataagagtttataaagaggaggcactcgtcaccttacaagccggttttgtaacgatgagttaggcc 38760319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 40010036 - 40010087
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| || |||||||| ||||||||||    
T  40010036 tcctcaccttacaagccggttttgtaaggatgtgttaggccccaaatttcaa 40010087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 305
Target Start/End: Complemental strand, 43688524 - 43688413
Alignment:
Q  195 tggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
    |||||||| ||||||||| | |||||||||   ||||  ||||||||| |||| ||||||||| | |||||  |||||| |||| ||| | |||||||||    
T  43688524 tggatttaatctcacatcggatagataggactcttgagaagagtttataaagaagatgcactcttcaccttgtaagccggttttataaagatgagttagg 43688425  T
Q  294 cctcaaatttca 305  Q
    || |||||||||    
T  43688424 ccccaaatttca 43688413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 883890 - 883952
Alignment:
Q  234 agagtttatgaag-agatgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| ||| ||| ||| |||| ||||||||||||| |||||||||| |||||||||||    
T  883890 agagtttataaaggagaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 883952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 936814 - 936916
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    ||||||||||||||||| | ||||||||||  ||||  ||||||||| |||| ||  ||||||| ||| ||||||||  |||||||  | ||||||||||    
T  936814 ggatttagtctcacatcggatagataggaatcttgagaagagtttataaagaggagacactcctcaccgtacaagccagttttgtatagatgagttaggc 936913  T
Q  295 ctc 297  Q
    |||    
T  936914 ctc 936916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 25621322 - 25621276
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  25621322 accttacaagccggttttgtaaggatgagttaggcccccaatttcaa 25621276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 28895567 - 28895625
Alignment:
Q  234 agagtttatgaagagatgcactccttaccttacaagccgattttgtaagggtgagttag 292  Q
    ||||||||| || |||  ||||||| ||||||||||||| |||||||||| ||||||||    
T  28895567 agagtttataaaaagagacactcctcaccttacaagccggttttgtaaggatgagttag 28895625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 39108155 - 39108201
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| |||||||||||||| ||||| ||||||||| ||||||    
T  39108155 accttacaatccgattttgtaaggatgagtcaggcctcaagtttcaa 39108201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 17509099 - 17509196
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgta 280  Q
    ||||||||| |||||||||| | |||||||| ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||| | |||||||    
T  17509099 ctttgagggggtggatttagccccacatcagatagatagcacccttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgta 17509196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 884119 - 884159
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||| ||||||||||||| |||||||||| |||||||||||    
T  884119 tcctcaccttacaagccggttttgtaaggttgagttaggcc 884159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 15961846 - 15961798
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaa 299  Q
    |||||||| ||| ||||||||| ||||||| || |||||||||||||||    
T  15961846 gcactcctcaccgtacaagccggttttgtagggatgagttaggcctcaa 15961798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 25441908 - 25441960
Alignment:
Q  254 ctccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||||||| ||||||||||  |||||||| | ||||||||||    
T  25441908 ctcctcaccttacaagccggttttgtaaggacgagttaggacccaaatttcaa 25441960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 301
Target Start/End: Original strand, 32667041 - 32667085
Alignment:
Q  257 cttaccttacaagccgattttgtaagggtgagttaggcctcaaat 301  Q
    |||||||||||||||| |||||||| | ||||||||||| |||||    
T  32667041 cttaccttacaagccggttttgtaatgatgagttaggccccaaat 32667085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 33277376 - 33277336
Alignment:
Q  266 caagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||| |||||||||| ||||||| ||||||||||||||    
T  33277376 caagccggttttgtaaggatgagttaagcctcaaatttcaa 33277336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 9e-78; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 21 - 304
Target Start/End: Complemental strand, 31563978 - 31563692
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccga--gcgt 118  Q
    |||||||||||||||||||||||||||||||||| | |||||  ||| ||||||||||||||| ||||||||||| ||||||||||| ||   |  |||     
T  31563978 tatccaagatctaccgttgtcgggattccgcattgccacgctacatgtccattgggtctgagcatgagggggtgtgttggaaatcccaccttaattgcga 31563879  T
Q  119 gagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttag 218  Q
     ||| |||||||||||||| |||||||||||| ||| || |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  31563878 taggaggtgtgttggtaattccaccttaattgcgatctgcccctagttgccttatgttggcttgtctttgagggggtggatttagtcccacatcagttag 31563779  T
Q  219 ataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttc 304  Q
    |||||||| ||||| ||||||||| |||| || |||||||| |||||| |||||| |||||||||| |||||||| || ||||||||    
T  31563778 ataggaagcttgatcagagtttataaagaggaggcactcctcaccttagaagccggttttgtaaggttgagttagcccccaaatttc 31563692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 23 - 306
Target Start/End: Complemental strand, 38300560 - 38300274
Alignment:
Q  23 tccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtgagg 122  Q
    |||| ||||||||||||||||||||||||||| | |||||  ||||||||| ||||||||||||||||||||| ||||||||| ||||||||  ||||||    
T  38300560 tccaggatctaccgttgtcgggattccgcattgccacgctacatgcccattaggtctgagcgtgagggggtgtgttggaaatctcgccccgaaagtgagg 38300461  T
Q  123 gggtgtg-ttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagtt-agat 220  Q
    ||||||| |||||||  |||||||||||| ||| || || ||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||    
T  38300460 gggtgtgtttggtaagaccaccttaattgcgatctgcccttagttgccttatgttggcttgtctttgagggggtggatttagtcccacatcggttaagat 38300361  T
Q  221 aggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||| ||||| ||||||||| |||| || |||||||  ||||||||||||| |||||||||| ||||||||| | ||||||||||    
T  38300360 aggaagcttgatcagagtttataaagaggaggcactccccaccttacaagccggttttgtaaggatgagttaggtcccaaatttcaa 38300274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 124 - 304
Target Start/End: Complemental strand, 31564177 - 31563996
Alignment:
Q  124 ggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagatagg 223  Q
    |||||||||||||| |||||||||||| ||| || |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  31564177 ggtgtgttggtaattccaccttaattgcgatctgcccctagttgccttatgttggcttgtctttgagggggtggatttagtcccacatcagttagatagg 31564078  T
Q  224 aagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttc 304  Q
    ||| ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||| | ||||||||||| ||||||||    
T  31564077 aagcttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaagttgagttaggccccaaatttc 31563996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 97 - 306
Target Start/End: Complemental strand, 38300955 - 38300743
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgtt-ggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagt 195  Q
    ||||||||| ||||||||  |||||||| |||||| |||||  |||||||||||| ||| || |||||||||||||||||||||||||||||||||| ||    
T  38300955 ttggaaatctcgccccgaaagtgaggggatgtgtttggtaagaccaccttaattgcgatctgcccctagttgccttatgttggcttgtctttgagggggt 38300856  T
Q  196 ggatttagtctcacatcagtt-agataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
    |||||||||| |||||| ||| |||||||||| ||||| ||||||||| |||| || |||||||| ||||||||||||| ||||||| || |||||||||    
T  38300855 ggatttagtcccacatcggttaagataggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtacggatgagttagg 38300756  T
Q  294 cctcaaatttcaa 306  Q
    |||||||||||||    
T  38300755 cctcaaatttcaa 38300743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 22 - 306
Target Start/End: Original strand, 21750291 - 21750588
Alignment:
Q  22 atccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgg-----gtctgagcgtgagggggtgtattggaaatcccgccccgagc 116  Q
    ||||| |||| |||||||||||||||||||||| | |||||| |||||||| ||     | |||||||||||||||||| | |||||||||||| | | |    
T  21750291 atccaggatcaaccgttgtcgggattccgcattgccacgcttcatgcccatgggcctaggcctgagcgtgagggggtgtgtcggaaatcccgcctcaaac 21750390  T
Q  117 gtgagggggtgtgttggtaatcccaccttaat-------tgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcac 209  Q
    |||||||| ||  |||||||| |||||||||        || ||| || |||||||  ||||||||||||||||||||||||| |||||||||||| |||    
T  21750391 gtgaggggatggattggtaattccaccttaaaattgcgatgcgatctgcccctagtcaccttatgttggcttgtctttgagggggtggatttagtcccac 21750490  T
Q  210 atcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||| ||||||||||||| ||||| ||||||||| |||| || |||||||| ||||||||||||  |||||||||| ||||||||||| ||||||||||    
T  21750491 atcggttagataggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttaggccccaaatttcaa 21750588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 21 - 306
Target Start/End: Complemental strand, 33909605 - 33909319
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtga 120  Q
    ||||||||||| |||||||||||||||||||||| | |||||| |||||| |||| |||||| | ||||| |||| ||||||||||  |||| || ||||    
T  33909605 tatccaagatccaccgttgtcgggattccgcattgccacgcttcatgcccgttggatctgagtgcgagggagtgtgttggaaatcctcccccaagtgtga 33909506  T
Q  121 gggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagat 220  Q
    |||| |||||||||||||||||||| |||| ||| || | ||||||||||| || ||||||| ||||||||| |||||||||||| || ||||||||| |    
T  33909505 ggggatgtgttggtaatcccacctttattgcgatctgcctctagttgccttgtgctggcttgactttgagggggtggatttagtcccaaatcagttaggt 33909406  T
Q  221 aggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| | || || ||||||||| |||| ||  ||||||  |||||||||| |  |||| ||| | |||||||  |||||||||||||    
T  33909405 aggacgcttaataagagtttattaagaggagacactccccaccttacaagtcagttttttaatgatgagttaaacctcaaatttcaa 33909319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 38300727 - 38300560
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtga 120  Q
    |||||| ||||||||||||||||||||||||||| | |||||  ||||||||| |||||||| ||||||| |||| ||||||||| ||||||||  ||||    
T  38300727 tatccaggatctaccgttgtcgggattccgcattgccacgctacatgcccattaggtctgagtgtgagggtgtgtgttggaaatctcgccccgaaagtga 38300628  T
Q  121 gggggtgtg-ttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtcttt 187  Q
    ||||||||| |||||||  |||||||||||| ||| || |||||||||||||||||||||||||||||    
T  38300627 gggggtgtgtttggtaagaccaccttaattgcgatctgcccctagttgccttatgttggcttgtcttt 38300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 103 - 306
Target Start/End: Complemental strand, 33910028 - 33909823
Alignment:
Q  103 atcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggattta 202  Q
    |||||||| | || |||||||| || ||||||||||||||||| |||| ||| || | ||||||||||| |||||||||| ||||||||| ||| |||||    
T  33910028 atcccgcctcaagtgtgaggggatgcgttggtaatcccacctttattgcgatctgcctctagttgccttgtgttggcttgactttgagggggtgaattta 33909929  T
Q  203 gtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggc-ctcaaa 300  Q
     |||||||| |||| |||| || | ||| | ||||||||| |||| |||||||||||  |||||||||||| |||||||||| |||||||||| | ||||    
T  33909928 atctcacataagttggataagacgtttggtaagagtttataaagaggatgcactcctcgccttacaagccggttttgtaaggatgagttaggctcccaaa 33909829  T
Q  301 tttcaa 306  Q
    ||||||    
T  33909828 tttcaa 33909823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 34357044 - 34356959
Alignment:
Q  163 agttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag 248  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||||    
T  34357044 agttgccttatgttggcttgtctttgagggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagag 34356959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 187 - 300
Target Start/End: Complemental strand, 34356953 - 34356839
Alignment:
Q  187 tgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggt 285  Q
    |||||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||||| |    
T  34356953 tgagggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggat 34356854  T
Q  286 gagttaggcctcaaa 300  Q
    |||||| ||| ||||    
T  34356853 gagttatgccccaaa 34356839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 44573629 - 44573752
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| ||||| || ||||||  ||  ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  44573629 ctttgagggggtggatttagtcccacataagatagataaaaatcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 44573728  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  44573729 gatgagttaggccccaaatttcaa 44573752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 48407615 - 48407744
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccatt------gggtctgagcgtgagggggtgtattggaaatcccgccccga 114  Q
    |||||| ||||||||||||||||||||||||||| | |||||| |||||||||      ||| |||||| ||||||||||| |||||||| |||||| ||    
T  48407615 tatccaggatctaccgttgtcgggattccgcattgccacgcttcatgcccattgggcccgggcctgagcatgagggggtgtgttggaaattccgccctga 48407714  T
Q  115 gcgtgagggggtgtgttggtaatcccacct 144  Q
       |||||||||| ||||||||| ||||||    
T  48407715 atatgagggggtgggttggtaattccacct 48407744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 3985763 - 3985886
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||| ||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  3985763 ctttgagggggtggatttagtcccacatcggatagatatgacttttgagaagagtttataaagaggaagcactcctcaccttacaagccggttttgtaag 3985862  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| |||| |||||    
T  3985863 gatgagttaggccccaaacttcaa 3985886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 34715569 - 34715446
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  34715569 ctttgagggggtggatttagtcccacatcggatagatagcacttttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 34715470  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||| ||| ||||||||||    
T  34715469 gatgagttatgccccaaatttcaa 34715446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 43101485 - 43101362
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||||| |||||||||   ||||  ||||||||| |||| || |||||||| |||||||||  || |||||||||    
T  43101485 ctttgagggggtggatttagtcccacatcagatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaaatcggttttgtaag 43101386  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||| |||| ||||||||||    
T  43101385 gatgagtttggccccaaatttcaa 43101362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 24539143 - 24539267
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagttta-tgaagagatg-cactccttaccttacaagccgattttgtaa 281  Q
    ||||||||| ||||||||||||  |||||||||||||| ||   ||||| |||||||  | |||||  | ||||||| ||||||||||||||||||||||    
T  24539143 ctttgagggggtggatttagtcctacatcagttagataagactcttgataagagttttgtaaagaggagacactcctcaccttacaagccgattttgtaa 24539242  T
Q  282 gggtgagttaggcctcaaatttcaa 306  Q
    || ||||||||||| |||| |||||    
T  24539243 ggatgagttaggccccaaacttcaa 24539267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 42 - 150
Target Start/End: Original strand, 53981750 - 53981858
Alignment:
Q  42 gggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatccca 141  Q
    ||||||||||| | | || ||| |||||||||||||| | | | ||||| ||||  |||||||||| ||||||||||||||| |||||| ||||||||||    
T  53981750 gggattccgcaatgccacacttcatgcccattgggtccgtgtgcgagggagtgtgatggaaatccctccccgagcgtgagggtgtgtgtcggtaatccca 53981849  T
Q  142 ccttaattg 150  Q
    |||| ||||    
T  53981850 cctttattg 53981858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 4255500 - 4255623
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||||| | ||||| |   ||||  ||| ||||| ||||| |||||||||| || |||||||||| ||||| |||    
T  4255500 ctttgagggggtggatttagtcccacatcagatggatagcactcttgagaagaatttataaagaggatgcactcctcactttacaagccggttttgcaag 4255599  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  4255600 gatgagttaggccccaaatttcaa 4255623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 50203971 - 50203848
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||| |||||||||||||| | |||||| ||   ||||  ||||||||| ||||| | |||||||| |||||| || ||| |||||||||    
T  50203971 ctttgagggggtgggtttagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcactcctcaccttataaaccggttttgtaag 50203872  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  50203871 gatgagttaggccccaaatttcaa 50203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 174 - 248
Target Start/End: Original strand, 48407827 - 48407901
Alignment:
Q  174 gttggcttgtctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag 248  Q
    |||| |||||||||||||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||||    
T  48407827 gttgccttgtctttgagggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagag 48407901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 44573976 - 44574049
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  44573976 agagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 44574049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 13769405 - 13769285
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||  | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||| | |||||||||    
T  13769405 ctttgagggggtggatttagtcccacattggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgtaag 13769306  T
Q  283 ggtgagttaggcctcaaattt 303  Q
    | ||||||||||| |||||||    
T  13769305 gatgagttaggccccaaattt 13769285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 44573316 - 44573428
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||| ||||||||| |||||||||    
T  44573316 ctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccctacaagccggttttgtaag 44573415  T
Q  283 ggtgagttaggcc 295  Q
    | |||||||||||    
T  44573416 gatgagttaggcc 44573428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 299
Target Start/End: Complemental strand, 48511741 - 48511637
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | ||||||||||  ||||  ||||||||| ||||| | |||||||| ||| ||||||||| ||||||| || ||||||||||    
T  48511741 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggc 48511642  T
Q  295 ctcaa 299  Q
    |||||    
T  48511641 ctcaa 48511637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 50692560 - 50692644
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaatagtg 311  Q
    ||||| ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| |||||||||| ||||    
T  50692560 ttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaacagtg 50692644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 22407487 - 22407432
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  22407487 gcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 22407432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 22407694 - 22407639
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  22407694 gcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 22407639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 27219319 - 27219442
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  27219319 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 27219418  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | | | ||| ||| ||||||||||    
T  27219419 gataacttatgccccaaatttcaa 27219442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 45443270 - 45443393
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||  | ||||||| |   ||||  ||||||||| ||||| | |||||| | ||||||||||||| |||| ||||    
T  45443270 ctttgagggggtggatttagtcccacattggatagatagcactcttgagaagagtttataaagaggaggcactcttcaccttacaagccggttttttaag 45443369  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  45443370 gatgagttaggccccaaatttcaa 45443393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 40230504 - 40230426
Alignment:
Q  228 ttgattagagtttatgaagagatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| |||||  ||| |||| ||||||| ||||| |||||||||| ||||||||||| ||||||||||    
T  40230504 ttgatgagagtttataaagaggagcaatcctcaccttacgagccggttttgtaaggttgagttaggccccaaatttcaa 40230426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 4191164 - 4191111
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaata 308  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  4191164 tcctgaccttacaagccggttttgtaaggatgagttaggccccaaatttcaata 4191111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 50692363 - 50692436
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  50692363 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 50692436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 295
Target Start/End: Original strand, 54369029 - 54369141
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||||||   ||||  ||||||||| |||| || |||||||| || |||||| ||| ||| |||||    
T  54369029 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcactttacaaaccggtttcgtaag 54369128  T
Q  283 ggtgagttaggcc 295  Q
    | |||||||||||    
T  54369129 gatgagttaggcc 54369141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 9264128 - 9264077
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  9264128 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 9264077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 9264335 - 9264284
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  9264335 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 9264284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 11414425 - 11414476
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||||| |||||| |||||||||| ||||||||||||||||||||||    
T  11414425 tcctcaccttagaagccggttttgtaaggatgagttaggcctcaaatttcaa 11414476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 19820570 - 19820519
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  19820570 tcctcaccttacaaaccggttttgtaaggatgagttaggcctcaaatttcaa 19820519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 40230709 - 40230630
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||| ||| ||||||||||    
T  40230709 ttgatgagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggttgagttaagccccaaatttcaa 40230630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 41380714 - 41380836
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | || |||   ||||||||||||| |||||||||    
T  41380714 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggccctcac-accttacaagccggttttgtaag 41380812  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  41380813 gttgagttaggccccaaatttcaa 41380836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 51338445 - 51338394
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  51338445 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 51338394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 51642470 - 51642419
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  51642470 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 51642419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 51642677 - 51642626
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  51642677 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 51642626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 9179173 - 9179235
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| ||||| |||||||||| |||||||||| || |||||||||| |||||||||||    
T  9179173 agagtttataaagaggatgcactcctcaccttacaagtcggttttgtaaggatgagttaggcc 9179235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 10856728 - 10856626
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | | |||||||   ||||  ||||||||| ||||| | |||||||||||  ||||||||| |||||||||| ||||||||||    
T  10856728 ggatttagtcccacatcggatggataggattcttgaaaagagtttataaagaggaggcactccttactatacaagccggttttgtaaggatgagttaggc 10856629  T
Q  295 ctc 297  Q
    |||    
T  10856628 ctc 10856626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 36020856 - 36020922
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaa 299  Q
    ||||||||| ||||| | |||||| ||||| ||||||||||||||||| || |||||||||||||||    
T  36020856 agagtttataaagaggaggcactcattaccgtacaagccgattttgtatggatgagttaggcctcaa 36020922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 38422050 - 38422096
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||||||||||||||||||| |||||||| || ||||||||||    
T  38422050 accttacaagccgattttgtaaggttgagttagaccccaaatttcaa 38422096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 48407753 - 48407803
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaa 147  Q
    ||||||||||||||||||  ||||||||||| ||||||||| |||||||||    
T  48407753 ttggaaatcccgccccgaatgtgagggggtgggttggtaattccaccttaa 48407803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 10453807 - 10453706
Alignment:
Q  194 gtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttag 292  Q
    |||||||||||| || ||| | |||||||||   ||||  || |||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||||||    
T  10453807 gtggatttagtcccagatcggatagataggattcttgagaagggtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 10453708  T
Q  293 gc 294  Q
    ||    
T  10453707 gc 10453706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 39078835 - 39078766
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatt 302  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||    
T  39078835 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatt 39078766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 39956738 - 39956665
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||  ||||||||||    
T  39956738 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggctccaaatttcaa 39956665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 4255989 - 4256032
Alignment:
Q  263 ttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||    
T  4255989 ttacaagccggttttgtaaggatgagttaggccccaaatttcaa 4256032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 21832241 - 21832190
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||| |||||||| |||||||||| ||||||||||| ||||||||||    
T  21832241 tcctcacctcacaagccggttttgtaaggatgagttaggccccaaatttcaa 21832190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 35011898 - 35011977
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | |||||||| ||||||  | ||| |||||||||| ||||||||||| ||||||||||    
T  35011898 ttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaggccccaaatttcaa 35011977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 40337913 - 40337878
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||||||||||||||||||||||| |||||||||||    
T  40337913 accttacaagccgattttgtaaggatgagttaggcc 40337878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 45941201 - 45941138
Alignment:
Q  229 tgattagagtttatgaagagatgcactccttaccttacaagccgattttgtaagggtgagttag 292  Q
    |||| ||||||||| ||||||||||  ||| ||||||||||| | |||||||||| ||||||||    
T  45941201 tgataagagtttatcaagagatgcatccctcaccttacaagctggttttgtaaggatgagttag 45941138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 50057087 - 50057142
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||| ||||||||||||  |||||||||| ||||||||||| ||||||||||    
T  50057087 gcacccctcaccttacaagccagttttgtaaggatgagttaggccccaaatttcaa 50057142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 4029681 - 4029635
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||| |||||||||| ||||||||||| ||||||||||    
T  4029681 accttacaaaccggttttgtaaggatgagttaggccccaaatttcaa 4029635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 48685345 - 48685303
Alignment:
Q  264 tacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||    
T  48685345 tacaagccggttttgtaaggatgagttaggccccaaatttcaa 48685303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 49477574 - 49477636
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| |||||||||||    
T  49477574 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 49477636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 50338419 - 50338373
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||||||| |||||||||| |||||||| || ||||||||||    
T  50338419 accttacaagccggttttgtaaggttgagttagaccccaaatttcaa 50338373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 21833564 - 21833637
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||||| | ||||||||| ||| |||||| ||||||||||| ||||||||||    
T  21833564 agagtttataaagaggaggcaatccttagcctacaagccggtttcgtaaggatgagttaggccccaaatttcaa 21833637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 22339781 - 22339854
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| |||||||||| || |||||||||| ||||||||||| | ||||||||    
T  22339781 agagtttataaagaggaggcaatcctcaccttacaagtcggttttgtaaggatgagttaggcccccaatttcaa 22339854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 48407543 - 48407592
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaa 300  Q
    |||||||| ||||||||||||| |||||||||| ||||||| ||| ||||    
T  48407543 gcactcctcaccttacaagccggttttgtaaggatgagttatgccccaaa 48407592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 53761468 - 53761391
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttc 304  Q
    ||||| ||||||||| ||||| | |||||||| |||| |  ||||| |||||||||| ||||||||||| ||||||||    
T  53761468 ttgataagagtttataaagaggaggcactcctcacctaatgagccggttttgtaaggttgagttaggccccaaatttc 53761391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 14170045 - 14170005
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagtta 291  Q
    |||||||| ||||||||||||| |||||||||| |||||||    
T  14170045 gcactcctcaccttacaagccggttttgtaaggatgagtta 14170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 42258972 - 42259020
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaattt 303  Q
    |||| ||||||||||||||||||| |||| ||||||||||  |||||||    
T  42258972 tcctcaccttacaagccgattttgcaaggatgagttaggctccaaattt 42259020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 196 - 299
Target Start/End: Complemental strand, 48511512 - 48511408
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | ||||||||||  ||||  ||||||||| ||||| | ||| |||| ||| ||||||||| ||||||   | ||||||||||    
T  48511512 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtctagatgagttaggc 48511413  T
Q  295 ctcaa 299  Q
    |||||    
T  48511412 ctcaa 48511408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 49477389 - 49477429
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||| ||||||||||||| |||||||||| |||||||||||    
T  49477389 tcctcaccttacaagccggttttgtaaggatgagttaggcc 49477429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 50095178 - 50095138
Alignment:
Q  116 cgtgagggggtgtgttggtaatcccaccttaattgtgattt 156  Q
    ||||||||||||||||||||||||| |||| |||| |||||    
T  50095178 cgtgagggggtgtgttggtaatcccgcctttattgcgattt 50095138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 100 - 306
Target Start/End: Complemental strand, 27048606 - 27048399
Alignment:
Q  100 gaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggat 199  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | | ||||||||| ||| |||||||||||||||| ||||||    
T  27048606 gaaatcccgccccgagcgtgagggggtgtgttggtaatcccgccttaattgtgatctgcctccagttgccttctgtcggcttgtctttgagggggtggat 27048507  T
Q  200 ttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctca 298  Q
    |||||| |||||| ||||||||||||| ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||||| ||||||||| | ||    
T  27048506 ttagtcccacatcggttagataggaagcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggtccca 27048407  T
Q  299 aatttcaa 306  Q
    ||||||||    
T  27048406 aatttcaa 27048399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 97 - 300
Target Start/End: Original strand, 41176602 - 41176813
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaat-------tgtgatttggccctagttgccttatgttggcttgtctttga 189  Q
    ||||||||||||||||||  ||||||||||| ||||||||| |||||||||        || ||| || ||| |||||||||||||||||||||||||||    
T  41176602 ttggaaatcccgccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttga 41176701  T
Q  190 gggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgag 288  Q
    ||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||||| ||||    
T  41176702 gggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgag 41176801  T
Q  289 ttaggcctcaaa 300  Q
    ||||||| ||||    
T  41176802 ttaggccccaaa 41176813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 97 - 300
Target Start/End: Complemental strand, 21497891 - 21497680
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaa--ttgtgatt-----tggccctagttgccttatgttggcttgtctttga 189  Q
    ||||||||||| ||||||  ||||||||||| ||||||||| |||||||||  ||| ||||     || ||| |||||||||||||||||||||||||||    
T  21497891 ttggaaatcccaccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgattcgatctgccccaagttgccttatgttggcttgtctttga 21497792  T
Q  190 gggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgag 288  Q
    ||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||||| ||||    
T  21497791 gggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgag 21497692  T
Q  289 ttaggcctcaaa 300  Q
    ||||||| ||||    
T  21497691 ttaggccccaaa 21497680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 97 - 300
Target Start/End: Original strand, 21498083 - 21498294
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaa--ttgtgatt-----tggccctagttgccttatgttggcttgtctttga 189  Q
    ||||||||||| ||||||  ||||||||||| ||||||||| |||||||||  ||| ||||     || ||| |||||||||||||||||||||||||||    
T  21498083 ttggaaatcccaccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgattcgatctgccccaagttgccttatgttggcttgtctttga 21498182  T
Q  190 gggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgag 288  Q
    ||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||||| ||||    
T  21498183 gggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgag 21498282  T
Q  289 ttaggcctcaaa 300  Q
    ||||||| ||||    
T  21498283 ttaggccccaaa 21498294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 113 - 306
Target Start/End: Complemental strand, 27048327 - 27048128
Alignment:
Q  113 gagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatc 212  Q
    |||||||||||  |||||||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||||  ||| |||||||||||| |||||     
T  27048327 gagcgtgagggtttgtgttggtaatcccaccttaattgtaatttgcccctggttgccttgtgttggcttgtctttatgggggtggatttagtcccacatt 27048228  T
Q  213 agtta-----gataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
     ||||     ||||||| | ||||| | ||||||| |||| || |||||||| ||||| ||||||| |||||||||| ||||||||||| ||||||||||    
T  27048227 ggttatataggataggacgcttgataaaagtttataaagaggaggcactcctcaccttgcaagccggttttgtaaggatgagttaggccccaaatttcaa 27048128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 97 - 306
Target Start/End: Complemental strand, 34206452 - 34206246
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    |||||||||| |||||||||| |||| || ||||||||||||||||||| |||||||| || | ||||||||||| ||||||     ||||||||| |||    
T  34206452 ttggaaatcctgccccgagcgggaggcggggtgttggtaatcccacctttattgtgatctgcctctagttgccttgtgttgg-----ctttgagggggtg 34206358  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagt-ttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||||||||| |||||||| ||   ||||| ||||| |||| |||| || |||||||| ||||||||||||| ||| |||||| ||||||||||    
T  34206357 gatttagtctcacatcggttagataagactcttgataagagtcttataaagaggaggcactcctcaccttacaagccggtttcgtaaggatgagttaggc 34206258  T
Q  295 ctcaaatttcaa 306  Q
    | ||||| ||||    
T  34206257 cccaaatctcaa 34206246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 111 - 306
Target Start/End: Complemental strand, 34206176 - 34205984
Alignment:
Q  111 ccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcaca 210  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| || ||||||||||||| ||||||     ||||||||| |||||||||||| ||||    
T  34206176 ccgagcgtgagggggtgtgttggtaatcccacctttattgcgatctgcccctagttgccttgtgttgg-----ctttgagggggtggatttagtcccaca 34206082  T
Q  211 tcagttagataggaagattgattagagt-ttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    || |||||||| ||   ||||| ||||| |||| |||| || |||||||| ||||||||||| | |||||||||| ||||||||| | ||||||||||    
T  34206081 tcggttagataagactcttgataagagtcttataaagaggaggcactcctcaccttacaagctggttttgtaaggatgagttaggtcccaaatttcaa 34205984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 97 - 300
Target Start/End: Original strand, 38908013 - 38908224
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaat-------tgtgatttggccctagttgccttatgttggcttgtctttga 189  Q
    ||||||||||| ||||||  ||||||||||| ||||||||| |||||||||        || ||| || ||| |||||||||||||||||||||||||||    
T  38908013 ttggaaatcccaccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgccccaagttgccttatgttggcttgtctttga 38908112  T
Q  190 gggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgag 288  Q
    ||| |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||| || |||||||| |||||| ||| || |||||||||| ||||    
T  38908113 gggggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaagcactcctcaccttaaaagacggttttgtaaggatgag 38908212  T
Q  289 ttaggcctcaaa 300  Q
    ||| ||| ||||    
T  38908213 ttatgccccaaa 38908224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 91 - 282
Target Start/End: Original strand, 7193560 - 7193759
Alignment:
Q  91 ggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaat-------tgtgatttggccctagttgccttatgttggcttgt 183  Q
    ||||| ||||||||||||||||||  ||||||||||| ||||||||| |||||||||        || ||| || ||||||| |||||||||||||||||    
T  7193560 ggtgtgttggaaatcccgccccgaatgtgagggggtgggttggtaattccaccttaaaattgcgatgcgatctgcccctagtggccttatgttggcttgt 7193659  T
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| ||||||||||||| |||||  |||| ||| || | || |||||||| |||||||||| || |||||||||    
T  7193660 ctttgagggggtggatttagtcccacatcggttagataggaagcttgatcggagtatataaaaaggaggcactcctcaccttacaagtcggttttgtaag 7193759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 21498023 - 21497900
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtga 120  Q
    |||||||||||||||||||||||||||||||||| | |||||| |||||||||||| | |||||||||||||||| |||||||||| |||| ||   |||    
T  21498023 tatccaagatctaccgttgtcgggattccgcattgccacgcttcatgcccattgggcccgagcgtgagggggtgtgttggaaatcctgccctgaatatga 21497924  T
Q  121 gggggtgtgttggtaatcccacct 144  Q
    ||||||| ||||||||| ||||||    
T  21497923 gggggtgggttggtaattccacct 21497900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 97 - 222
Target Start/End: Original strand, 51564816 - 51564941
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||||||| || | ||  ||||||||||||||| ||||||||||||||||| ||| |  ||||||||||||| ||||||| |||||||||||| |||    
T  51564816 ttggaaatcccccctcaagaatgagggggtgtgttgctaatcccaccttaattgcgatcttcccctagttgccttgtgttggcctgtctttgagggggtg 51564915  T
Q  197 gatttagtctcacatcagttagatag 222  Q
    ||||||||| |||||  |||||||||    
T  51564916 gatttagtcccacattggttagatag 51564941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 15665143 - 15665266
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||||||   ||||  |||||||||  |||| | |||||||| ||||||||||||| |||||||||    
T  15665143 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttatatagaggaggcactcctcaccttacaagccggttttgtaag 15665242  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||||||||||||||    
T  15665243 gatgagttaggcctcaaatttcaa 15665266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 36558580 - 36558457
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||| ||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  36558580 ctttgagggggtggatttagtcccacatcggatagatatgacttttgagaagagtttataaagagtaagcactcctcaccttacaagccggttttgtaag 36558481  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  36558480 gatgagttaggccccaaatttcaa 36558457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 51469471 - 51469594
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| || ||||||    
T  51469471 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttgtgtaag 51469570  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  51469571 gatgagttaggccccaaatttcaa 51469594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 53740172 - 53740295
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  53740172 ctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 53740271  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  53740272 gatgagttaggccccaaatttcaa 53740295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 13254373 - 13254496
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||  | |||||||||  |||||  ||||||||| |||| || |||||||| ||||||||| ||| |||||||||    
T  13254373 ctttgagggggtggatttagtcccacattggatagataggactattgagaagagtttataaagatgaggcactcctcaccttacaacccggttttgtaag 13254472  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
      ||||||||||| ||||||||||    
T  13254473 catgagttaggccccaaatttcaa 13254496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 29669476 - 29669354
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  29669476 ctttgaggg-gtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 29669378  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  29669377 gatgagttaggccccaaatttcaa 29669354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 56509599 - 56509726
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||||||||||||  ||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| | ||||||||||| ||||||| |    
T  56509599 ctttgagggggtggatttagtcctacatcggatagataggacccttgagaagagtttataaagaggaggcactcctcaacttacaagccggttttgtacg 56509698  T
Q  283 ggtgagttaggcctcaaatttcaatagt 310  Q
    | ||||||||||| ||||||||||||||    
T  56509699 gatgagttaggccccaaatttcaatagt 56509726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 50858318 - 50858438
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||||| ||||||| |   ||||  ||||||||| ||||| | ||||||||   ||||||||||| |||||||||    
T  50858318 ctttgagggggtggatttagtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcactcct---cttacaagccggttttgtaag 50858414  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  50858415 gatgagttaggccccaaatttcaa 50858438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 28085636 - 28085696
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttg 157  Q
    ||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  28085636 ttggaaatcccgctccgagcgtgaggggttgtgttggtaatctcaccttaattgcgatttg 28085696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 29669791 - 29669669
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||||| ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  29669791 ctttgaggg-gtggatttagtcccacatcagatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 29669693  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||||  || ||||||||||    
T  29669692 gatgagttaaaccccaaatttcaa 29669669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 45427050 - 45426927
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||| | |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| |||||||||| || |||||||||    
T  45427050 ctttgagggggtggatttagccccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcggttttgtaag 45426951  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  45426950 gatgagttaggccccaaatttcaa 45426927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 45427366 - 45427243
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||||| || ||   |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  45427366 ctttgagggggtggatttagtcccacatcagatatattttactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 45427267  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  45427266 gatgagttaggccccaaatttcaa 45427243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 50858002 - 50858125
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||| ||||| |||| || | |||||| ||||||||||||| |||||||||    
T  50858002 ctttgagggggtggatttagtcccacatcggatagatagtactcttgagaagattttataaagaagaggtactcctcaccttacaagccggttttgtaag 50858101  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  50858102 gatgagttaggccccaaatttcaa 50858125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 52214649 - 52214728
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  52214649 ttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 52214728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 306
Target Start/End: Original strand, 43972346 - 43972468
Alignment:
Q  185 tttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagg 283  Q
    |||||||| ||| |||||||| |||||| | |||||||||   ||||  | |||| || ||||| | |||||||| ||||||||||||| ||||||||||    
T  43972346 tttgagggggtgaatttagtcccacatcggatagataggactcttgagaaaagttgataaagaggaggcactcctcaccttacaagccggttttgtaagg 43972445  T
Q  284 gtgagttaggcctcaaatttcaa 306  Q
     ||||||||||| ||||||||||    
T  43972446 atgagttaggccccaaatttcaa 43972468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 185 - 306
Target Start/End: Original strand, 51470474 - 51470596
Alignment:
Q  185 tttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagg 283  Q
    |||||||| | |||||||||| |||||| | |||||||||   ||||  ||||||||| | ||| | || ||||| ||||||||||||| ||||||||||    
T  51470474 tttgagggggaggatttagtcccacatcggatagataggactcttgagaagagtttataaggaggaggctctcctcaccttacaagccggttttgtaagg 51470573  T
Q  284 gtgagttaggcctcaaatttcaa 306  Q
     ||||||||||| ||||||||||    
T  51470574 atgagttaggccccaaatttcaa 51470596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 5488407 - 5488480
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5488407 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcctcaaatttcaa 5488480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 202 - 309
Target Start/End: Complemental strand, 52827328 - 52827221
Alignment:
Q  202 agtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaa 300  Q
    ||||||||||  | |||||||||   ||||| ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||| ||||| ||||    
T  52827328 agtctcacattggatagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtcaggcc-caaa 52827230  T
Q  301 tttcaatag 309  Q
    |||||||||    
T  52827229 tttcaatag 52827221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 990537 - 990660
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||| |||||||| |||||| | ||||||  |   ||||  ||||||||| ||||| | |||||||| |||||||||| || |||||||||    
T  990537 ctttgagggggtgaatttagtcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcggttttgtaag 990636  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  990637 gatgagttaggccccaaatttcaa 990660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 991194 - 991317
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||  |   ||||  ||||||||| | ||| | |||||||| ||||||||||||| |||||||||    
T  991194 ctttgagggggtggatttagtcccacatcggatagataacactcttgagaagagtttataatgaggaggcactcctcaccttacaagccggttttgtaag 991293  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||||| || ||||||||||    
T  991294 gatgagttagaccccaaatttcaa 991317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 22867074 - 22867197
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| ||| || | |||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| ||||||  |    
T  22867074 ctttgagggggtggatttagtcccacgtcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtggg 22867173  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | || |||||||| ||||||||||    
T  22867174 gttgtgttaggccccaaatttcaa 22867197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 23018460 - 23018583
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    |||| |||| ||| ||||| ||||||||| | |||||| ||   ||||  ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||    
T  23018460 ctttaagggggtgaatttaatctcacatcggatagatatgactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaag 23018559  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  23018560 gatgagttaggccccaaatttcaa 23018583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 29734551 - 29734674
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||| |||||||| |||||| | |||||||||   ||||  ||||||  | ||||| | |||||||| ||||||||||||| |||||||||    
T  29734551 ctttgagggggtgaatttagtcccacatcggatagataggacttttgagaagagttattaaagaggaggcactcctcaccttacaagccggttttgtaag 29734650  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||| |||| ||||||||||    
T  29734651 gatgagttgggccccaaatttcaa 29734674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 2016534 - 2016636
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    ||||||||||||||||||| |||||||||   ||||  ||||||||| |||| || |||||||| ||| || ||||||||||||||  | ||||||||||    
T  2016534 ggatttagtctcacatcagatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtataagccgattttgtagagttgagttaggc 2016633  T
Q  295 ctc 297  Q
    |||    
T  2016634 ctc 2016636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 20545854 - 20545785
Alignment:
Q  113 gagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttg 182  Q
    ||||||||||||||||||||||||||| ||||||| || |||||| || | |||||||  ||||||||||    
T  20545854 gagcgtgagggggtgtgttggtaatcctaccttaactgcgatttgcccttggttgcctcgtgttggcttg 20545785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 294
Target Start/End: Complemental strand, 28496573 - 28496508
Alignment:
Q  229 tgattagagtttatgaagagatgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||||||| |||||  |||| ||| ||||||||||||| |||||||||| ||||||||||    
T  28496573 tgattagagtttataaagagtggcacccctcaccttacaagccggttttgtaaggatgagttaggc 28496508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 299
Target Start/End: Original strand, 11290171 - 11290275
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | ||||||||||  ||||  ||||||||| ||||| | ||| |||| ||| ||||||||| ||||||| || ||||||||||    
T  11290171 ggatttagtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtatggatgagttaggc 11290270  T
Q  295 ctcaa 299  Q
    |||||    
T  11290271 ctcaa 11290275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 27048383 - 27048300
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatccc 107  Q
    ||||||||||||||||||    |||||||||||| | || ||| ||||||||||||||||||||||||||  ||| |||| ||||||    
T  27048383 tatccaagatctaccgtta---ggattccgcattgccacacttcatgcccattgggtctgagcgtgagggtttgtgttggtaatccc 27048300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 283
Target Start/End: Original strand, 28085700 - 28085784
Alignment:
Q  200 ttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagg 283  Q
    |||||| |||| | ||||||||||| | ||||| ||||||||| ||||| | |||||||| ||||||||||||| ||||||||||    
T  28085700 ttagtcccacaacggttagataggacgcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaagg 28085784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 306
Target Start/End: Complemental strand, 48843128 - 48843008
Alignment:
Q  187 tgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggt 285  Q
    |||||| |||||||||||| | |||||| |||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||| || || |    
T  48843128 tgagggggtggatttagtcccgcatcagatagataggactcttgaaaagagtttataaagaggaggcactcctcaccttacaagccggttttttagggat 48843029  T
Q  286 gagttaggcctcaaatttcaa 306  Q
     ||||||||| |||| |||||    
T  48843028 tagttaggccccaaacttcaa 48843008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 7193510 - 7193557
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccacct 144  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  7193510 ttggaaatcccgccccgaacgtgagggggtgggttggtaattccacct 7193557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 25753675 - 25753596
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||| | ||||||||||    
T  25753675 ttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggtcccaaatttcaa 25753596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 28395239 - 28395290
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  28395239 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 28395290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 35399299 - 35399248
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  35399299 tcctcaccttacaagccggttttgtaaggttgagttaggccccaaatttcaa 35399248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 35399458 - 35399407
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  35399458 tcctcaccttacaagccggttttgtaaggttgagttaggccccaaatttcaa 35399407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 53739856 - 53739979
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| || ||| | ||||||| |   ||||  ||||||||| ||||| | | |||||| | ||||||||||| |||||||||    
T  53739856 ctttgagggggtggatttagtcccatatcggatagatagtactcttgagaagagtttataaagaggaggaactcctcagcttacaagccggttttgtaag 53739955  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||| ||||||| ||||||||||    
T  53739956 gatgatttaggccccaaatttcaa 53739979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 56511538 - 56511617
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | |||||||| ||||||  | |||||||||||||| ||||||||||| ||||||||||    
T  56511538 ttgataagagtttataaagaggaggcactcctcaccttatgaaccgattttgtaaggatgagttaggccccaaatttcaa 56511617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 18435972 - 18435918
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttca 305  Q
    |||||||| ||||||||||||| |||||||||| || |||||||| |||||||||    
T  18435972 gcactcctcaccttacaagccggttttgtaaggatgtgttaggccccaaatttca 18435918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 27634363 - 27634321
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatt 302  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  27634363 accttacaagccgattttgtaaggatgagttaggccccaaatt 27634321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 35269051 - 35269113
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| ||||| | |||||||| ||||||||||| |||||||||||| |||||||||||    
T  35269051 agagtttataaagaggaagcactcctcaccttacaagctgattttgtaaggatgagttaggcc 35269113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 46529025 - 46528923
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    ||||||||||||||||| | ||||| |||   ||||  ||||||||| ||||| | |||||||| ||| ||||||||| ||||||| || ||||||||||    
T  46529025 ggatttagtctcacatcggatagattggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggc 46528926  T
Q  295 ctc 297  Q
    |||    
T  46528925 ctc 46528923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 12016747 - 12016674
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  12016747 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcccccaatttcaa 12016674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 12016955 - 12016882
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  12016955 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcccccaatttcaa 12016882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 29113489 - 29113562
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  29113489 agagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggccccaaatttcaa 29113562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 43943713 - 43943786
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  43943713 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcccccaatttcaa 43943786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 26942918 - 26942874
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||    
T  26942918 gcacccctcaccttacaagccgattttgtaaggatgagttaggcc 26942874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 34206230 - 34206147
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatccc 107  Q
    ||||||||||||| |||||   |||||||||||| | | | || |||||| ||||||| |||||||||||||||| |||| ||||||    
T  34206230 tatccaagatctatcgttg---ggattccgcattgccagggttcatgcccgttgggtccgagcgtgagggggtgtgttggtaatccc 34206147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 6778718 - 6778667
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||| |||||||| |||||||||| |||||||| |||||||||||||    
T  6778718 tcctcacctcacaagccggttttgtaaggttgagttagacctcaaatttcaa 6778667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 21498593 - 21498640
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatt 302  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||    
T  21498593 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatt 21498640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 306
Target Start/End: Original strand, 35565120 - 35565190
Alignment:
Q  235 gagtttatgaagagatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| | |||| ||| ||||  |||||||||||| |||||||||| ||||||||| ||||||||||||    
T  35565120 gagtttataatgagaggcaatcctccccttacaagccggttttgtaaggatgagttagg-ctcaaatttcaa 35565190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 53386154 - 53386103
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||||||||| || |||||||||| |||||||| |||||||||||||    
T  53386154 tcctcaccttacaagtcggttttgtaaggatgagttagacctcaaatttcaa 53386103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 56511331 - 56511410
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | |||||||| ||||||  | ||| |||||||||| ||||||||||| ||||||||||    
T  56511331 ttgataagagtttataaagaggaggcactcctcaccttatgaaccggttttgtaaggatgagttaggccccaaatttcaa 56511410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 17077181 - 17077135
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||||    
T  17077181 accttgcaagccggttttgtaaggttgagttaggccccaaatttcaa 17077135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 33912045 - 33912147
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| ||  || |||||| |||||||||| ||||||||||    
T  33912045 ggatttagtcccacatcgggtagataggatacttgagaagagtttataaagaggaggcactcctcactgtataagccggttttgtaaggatgagttaggc 33912144  T
Q  295 ctc 297  Q
    |||    
T  33912145 ctc 33912147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 39110779 - 39110821
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctc 297  Q
    |||| |||||||||||||||||||||||  |||||||||||||    
T  39110779 tcctcaccttacaagccgattttgtaagattgagttaggcctc 39110821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 51470715 - 51470757
Alignment:
Q  264 tacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||    
T  51470715 tacaagccggttttgtaaggatgagttaggccccaaatttcaa 51470757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 20545865 - 20545828
Alignment:
Q  69 ccattgggtctgagcgtgagggggtgtattggaaatcc 106  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  20545865 ccattgggtctgagcgtgagggggtgtgttggtaatcc 20545828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 28245828 - 28245901
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||| ||||||| |||||||||| ||||||||||| | ||||||||    
T  28245828 agagtttataaagaggaggcaatcctcaccttgcaagccggttttgtaaggatgagttaggcccccaatttcaa 28245901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 40197272 - 40197321
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttc 304  Q
    ||||||| ||| ||||||||||||||||| |||||||||||  |||||||    
T  40197272 tccttacattagaagccgattttgtaaggatgagttaggccctaaatttc 40197321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 6778464 - 6778508
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaa 299  Q
    |||| |||| |||||||| |||||||||| |||||||||||||||    
T  6778464 tcctcacctcacaagccggttttgtaaggttgagttaggcctcaa 6778508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 17076971 - 17076931
Alignment:
Q  266 caagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||| |||||||||| ||||||||||| ||||||||||    
T  17076971 caagccggttttgtaaggttgagttaggccccaaatttcaa 17076931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 4e-58; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 97 - 306
Target Start/End: Complemental strand, 12965447 - 12965237
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||||||||||| |||| |||||||| ||||||||||| ||||||  |||| ||| ||  ||||||||||||||||||||||||||||||||| |||    
T  12965447 ttggaaatcccgccctgagcatgagggggggtgttggtaattccacctgtattgcgatctgcacctagttgccttatgttggcttgtctttgagggggtg 12965348  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||  |||||| ||||||||||||| ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||||| |||||||||||    
T  12965347 gatttagtgccacatcggttagataggaagcttgatcagagtttataaagaggaagcactcctcaccttacaagccggttttgtaaggatgagttaggcc 12965248  T
Q  296 tcaaatttcaa 306  Q
     ||||||||||    
T  12965247 ccaaatttcaa 12965237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 38663237 - 38663358
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| ||||||||| ||||||||   ||||| ||||||||| ||||| | |||||| | ||||||||||||| |||||||||    
T  38663237 ctttgagggggtggatttagtcccacatcagtaagataggactcttgataagagtttataaagaggaggcactcgtcaccttacaagccggttttgtaag 38663336  T
Q  283 ggtgagttaggcctcaaatttc 304  Q
    | ||||||||||| ||||||||    
T  38663337 gatgagttaggccccaaatttc 38663358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 29432402 - 29432523
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||  |||||||||||   ||||| ||||||||| ||||| | ||||| || ||||||||||||| |||||||||    
T  29432402 ctttgagggggtggatttagtcccacattggttagataggactcttgataagagtttataaagaggaggcacttctcaccttacaagccggttttgtaag 29432501  T
Q  283 ggtgagttaggcctcaaatttc 304  Q
    | ||||||||||| ||||||||    
T  29432502 gatgagttaggccacaaatttc 29432523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 13843687 - 13843810
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||||| ||||||| |   ||||  ||||||||| ||||| | || ||||| ||||||||||||| |||||||||    
T  13843687 ctttgagggggtggatttagtcccacatcagatagatagtactcttgagaagagtttataaagaggaggcgctcctcaccttacaagccggttttgtaag 13843786  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  13843787 gatgagttaggccccaaatttcaa 13843810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 27760065 - 27760188
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||||||   ||||  ||||||| | |||| || |||||||| ||||||||||||| |||||||||    
T  27760065 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttctaaagaagaggcactcctcaccttacaagccggttttgtaag 27760164  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||| ||||||||||||||    
T  27760165 gttgagttaagcctcaaatttcaa 27760188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 38131754 - 38131877
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaag 282  Q
    |||||||||||||||||||||| |||||| | |||||||||   ||||  ||||||||| |||||  | || |||| ||||||||||||| |||||||||    
T  38131754 ctttgagggagtggatttagtcccacatcggatagataggactcttgagaagagtttataaagaggagacattcctcaccttacaagccggttttgtaag 38131853  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  38131854 gatgagttaggccccaaatttcaa 38131877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 184 - 310
Target Start/End: Original strand, 24918154 - 24918278
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| ||||   | ||||||||| | ||||  ||||||||| ||||| | ||||| || ||||||||||||| |||||||||    
T  24918154 ctttgagggggtggatttagtcccaca---gatagataggacgcttgagaagagtttataaagaggaggcactactcaccttacaagccggttttgtaag 24918250  T
Q  283 ggtgagttaggcctcaaatttcaatagt 310  Q
    | ||||||||||| ||||||||||||||    
T  24918251 gatgagttaggccccaaatttcaatagt 24918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 98 - 223
Target Start/End: Complemental strand, 35750542 - 35750418
Alignment:
Q  98 tggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtgg 197  Q
    ||||||||||||||| | | |||||||| ||||||||||| | |||||||||| ||| || ||||||||| | | |||||  ||| ||||||||| ||||    
T  35750542 tggaaatcccgccccaaacttgaggggg-gtgttggtaattctaccttaattgcgatctgtccctagttgtcctgtgttgatttgcctttgagggggtgg 35750444  T
Q  198 atttagtctcacatcagttagatagg 223  Q
    ||||||| |||| || ||||||||||    
T  35750443 atttagtgtcacgtcggttagatagg 35750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 37995748 - 37995628
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||    
T  37995748 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaag 37995649  T
Q  283 ggtgagttaggcctcaaattt 303  Q
    | ||||||||||| |||||||    
T  37995648 gatgagttaggccccaaattt 37995628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 873810 - 873687
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||||||   ||||  |||||||||  |||| | ||| |||| ||||||||||| | |||||||||    
T  873810 ctttgagggggtggatttagtcccacatcggatagataggactcttgagaagagtttatagagaggaggcattcctcaccttacaagcaggttttgtaag 873711  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  873710 gatgagttaggccccaaatttcaa 873687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 24994062 - 24994182
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| ||||   | || |||||| | ||||  ||||||||| ||||| | ||||| || ||||||||||||| |||||||||    
T  24994062 ctttgagggggtggatttagtcccaca---gataaataggatgcttgagaagagtttataaagaggaggcactactcaccttacaagccggttttgtaag 24994158  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  24994159 gatgagttaggccccaaatttcaa 24994182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 34457136 - 34457209
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| ||||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  34457136 agagtttataaagaggatgcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 34457209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 192 - 299
Target Start/End: Complemental strand, 14769938 - 14769830
Alignment:
Q  192 gagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagtt 290  Q
    ||||||||||||||||||||| | |||||||||   ||||  ||||||||| |||| ||  ||||||| ||| ||||||||| ||||| |||| ||||||    
T  14769938 gagtggatttagtctcacatcggatagataggattcttgagaagagtttataaagacgagacactcctcaccgtacaagccggttttgaaaggatgagtt 14769839  T
Q  291 aggcctcaa 299  Q
    |||||||||    
T  14769838 aggcctcaa 14769830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 30588047 - 30588164
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| ||||||||| |   ||||| ||||||||| |||| || ||||||    |||||||||||  |||||||||    
T  30588047 ctttgagggggtggatttagtcccacatcggttagatagaactcttgataagagtttataaagaggaggcactc----ccttacaagcctgttttgtaag 30588142  T
Q  283 ggtgagttaggcctcaaatttc 304  Q
    | ||||||||||| ||||||||    
T  30588143 gatgagttaggccccaaatttc 30588164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 1028207 - 1028084
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||| ||| |||||| |     
T  1028207 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaaaccggttttgtgac 1028108  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  1028107 gatgagttaggccccaaatttcaa 1028084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 29396445 - 29396343
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||||| ||||||||||  ||||  | ||||||| ||||| | |||||||| ||| ||||||||| ||||||| || ||||||||||    
T  29396445 ggatttagtcccacatcagatagataggaatcttgagaaaagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttaggc 29396346  T
Q  295 ctc 297  Q
    |||    
T  29396345 ctc 29396343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 13413624 - 13413697
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  13413624 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 13413697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 34457343 - 34457416
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| ||||| | || ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  34457343 agagtttataaagaggatgcaattctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 34457416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 2908811 - 2908760
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  2908811 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 2908760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 13844003 - 13844126
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | ||||| || |||||||||  || |||||||||    
T  13844003 ctttgagggggtggatttagtcccacatctgatagatagtactcttgagaagagtttataaagaggaggcacttctcaccttacaaaacggttttgtaag 13844102  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||||||||  |||||||||    
T  13844103 gatgagttaggccctaaatttcaa 13844126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 28358077 - 28358026
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  28358077 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 28358026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 35527052 - 35526973
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaatagtga 312  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| |||||| ||| |||||    
T  35527052 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaattacaacagtga 35526973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 395078 - 395036
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  395078 gcactcctcaccttacaagccgattttgtaaggatgagttagg 395036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 3762973 - 3763019
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  3762973 accttacaagccggttttgtaaggatgagttaggccccaaatttcaa 3763019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 4465165 - 4465080
Alignment:
Q  16 gagtttatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaat 104  Q
    |||| |||||||||| ||||||||   |||||||||||  | ||||||  ||||||||||||| |||||||||||||||  ||||||||    
T  4465165 gagtctatccaagatttaccgttg---ggattccgcatcgccacgcttcgtgcccattgggtccgagcgtgagggggtgcgttggaaat 4465080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 293
Target Start/End: Complemental strand, 17016207 - 17016097
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||||| |||||||||   |||| ||   ||||| |||| ||| ||||||| |||||||||||   |||||||||    
T  17016207 ctttgagggggtggatttagtcccacatcagatagataggactcttgagtactttttataaagaggatacactcctcaccttacaagctagttttgtaag 17016108  T
Q  283 ggtgagttagg 293  Q
    | |||||||||    
T  17016107 gatgagttagg 17016097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 33040472 - 33040574
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaa-gagatgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||||| |||||||||   ||||  |||||||||| | | || |||||||| ||||||||||||| |||||||||| | || |||||    
T  33040472 ggatttagtcccacatcagatagataggattcttgagaagagtttatgtatgggaggcactcctcaccttacaagccggttttgtaaggataaggtaggc 33040571  T
Q  295 ctc 297  Q
    |||    
T  33040572 ctc 33040574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 40169078 - 40169032
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  40169078 accttacaagccggttttgtaaggatgagttaggccccaaatttcaa 40169032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 14029002 - 14029047
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccac 142  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||    
T  14029002 ttggaaatcctgccccgagcgtgagggagtgtgttgataatcccac 14029047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 28156070 - 28156143
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||| ||||||| ||||||||||    
T  28156070 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgaattaggccccaaatttcaa 28156143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 35527316 - 35527259
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaatagtga 312  Q
    |||| ||||||||||||| |||||||||| ||||||||||| |||||| ||| |||||    
T  35527316 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaattacaacagtga 35527259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 48353 - 48302
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  48353 tcctcaccttacaagccggttttgtaaggatgagttaggcccccaatttcaa 48302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 4465299 - 4465176
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||| | || ||||||||| ||| || |||||||||||   ||||| ||||||||  |||| ||  ||||||| |||||| |||| | |||||||||    
T  4465299 ctttgagagggtagatttagtcccacgtcggttagataggactcttgataagagtttactaagaggagacactcctcaccttaaaagctggttttgtaag 4465200  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||| ||| ||||||||||    
T  4465199 gatgagttaagccccaaatttcaa 4465176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 24125124 - 24125175
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| |||||||| || ||||||||||    
T  24125124 tcctcaccttacaagccggttttgtaaggatgagttagaccccaaatttcaa 24125175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 36878388 - 36878439
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||||||||||| ||||||||||| ||| |||||| |||||||||||    
T  36878388 tcctcaccttacaagccaattttgtaaggatgatttaggcttcaaatttcaa 36878439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 38376793 - 38376840
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatt 302  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||    
T  38376793 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatt 38376840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 39205710 - 39205656
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| |||||| |||||| |||||||||| ||||||||||| ||||||||||    
T  39205710 gcactcctcaccttaaaagccggttttgtaaggatgagttaggcc-caaatttcaa 39205656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 48168 - 48106
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| |||||||||||    
T  48168 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 48106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 152
Target Start/End: Original strand, 13843890 - 13843928
Alignment:
Q  114 agcgtgagggggtgtgttggtaatcccaccttaattgtg 152  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  13843890 agcgtgagggggtgtgttggaaattccaccttaattgtg 13843928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 22196428 - 22196326
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||| || |||||| |||||||||| ||||||||||    
T  22196428 ggatttagtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccgtaaaagccggttttgtaaggatgagttaggc 22196329  T
Q  295 ctc 297  Q
    |||    
T  22196328 ctc 22196326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 1892133 - 1892092
Alignment:
Q  254 ctccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||| ||||||||||||| |||||||||| |||||||||||    
T  1892133 ctcctcaccttacaagccggttttgtaaggatgagttaggcc 1892092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 20720419 - 20720346
Alignment:
Q  234 agagtttatgaagagatg-cactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| |||||| | ||||||| || |||||| || ||||||||||| ||||||| ||| ||||||||||    
T  20720419 agagtttataaagagaaggcactcctcactttacaaaccaattttgtaaggatgagttaagccccaaatttcaa 20720346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 36878565 - 36878606
Alignment:
Q  265 acaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| |||||||||| |||||||| |||||||||||||    
T  36878565 acaagccggttttgtaaggatgagttagacctcaaatttcaa 36878606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 43490258 - 43490209
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttc 304  Q
    |||| ||||||||||||| |||||| ||| ||||||||||| ||||||||    
T  43490258 tcctcaccttacaagccggttttgtgaggatgagttaggccccaaatttc 43490209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 2716604 - 2716648
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||||||| |||||| |||||| |||||||||| |||||||||||    
T  2716604 gcactcctcaccttataagccggttttgtaaggatgagttaggcc 2716648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 3015448 - 3015408
Alignment:
Q  266 caagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||| |||||||||| ||||||||||| ||||||||||    
T  3015448 caagccggttttgtaaggttgagttaggccccaaatttcaa 3015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 18541780 - 18541824
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||||||| | | |||||||||||||||||||| |||||||||||    
T  18541780 gcactcctcaacctacaagccgattttgtaaggatgagttaggcc 18541824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 30769898 - 30769862
Alignment:
Q  267 aagccgattttgtaagggtgagttaggcctcaaattt 303  Q
    |||||| |||||||||| |||||||||||||||||||    
T  30769898 aagccggttttgtaaggatgagttaggcctcaaattt 30769862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 37656774 - 37656734
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||| ||||||||||||| |||||||||| |||||||||||    
T  37656774 tcctcaccttacaagccggttttgtaaggatgagttaggcc 37656734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 40168894 - 40168850
Alignment:
Q  262 cttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| | |||||||||| ||||||||||| ||||||||||    
T  40168894 cttacaagctggttttgtaaggatgagttaggccccaaatttcaa 40168850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 3e-56; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 25 - 293
Target Start/End: Original strand, 12524968 - 12525233
Alignment:
Q  25 caagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtgagggg 124  Q
    |||||||||||||||   |||||||||||| | || ||| ||| |||||||||||||||||| |||||||| || |||||| |||||||||||| |||||    
T  12524968 caagatctaccgttg---ggattccgcattgccacacttcatgtccattgggtctgagcgtg-gggggtgtgttagaaatctcgccccgagcgtaagggg 12525063  T
Q  125 gtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagatagga 224  Q
    ||||| | |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||  || |||||||| |||||| |||||||||||    
T  12525064 gtgtgctagtaatcccaccttaattgcgatttgcccctagtttccttgtgttggcttgtctttaaggggatgaatttagtcccacatcggttagatagga 12525163  T
Q  225 agattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
     | || || ||||||||| |||||| | |||||| ||||||||||||   |||||||||| |||||||||    
T  12525164 cgcttaataagagtttataaagagaagacactccataccttacaagctagttttgtaaggatgagttagg 12525233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 97 - 303
Target Start/End: Complemental strand, 48116488 - 48116290
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    |||||||||||||||||||||||||||||||||         |||||||||||| ||| || |||||||||||||||||||||||||||||||||| |||    
T  48116488 ttggaaatcccgccccgagcgtgagggggtgtg---------ccaccttaattgcgatctgcccctagttgccttatgttggcttgtctttgagggggtg 48116398  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| |||||  ||||||||||||| ||||| ||||||||| |||| ||  ||||||| ||||||||||||| |||||||||| ||||||||||     
T  48116397 gatttagtcccacattggttagataggaagcttgatcagagtttataaagaggacacactcctcaccttacaagccggttttgtaaggatgagttaggct 48116298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 91 - 306
Target Start/End: Complemental strand, 12578677 - 12578451
Alignment:
Q  91 ggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgag 190  Q
    ||||| |||||||||||||||||| |  ||||||||| ||||||||| |||||||||||| ||| ||  |||| ||| ||||||||||||||||||||||    
T  12578677 ggtgtgttggaaatcccgccccgaactagagggggtgggttggtaattccaccttaattgcgatctgctcctaattgtcttatgttggcttgtctttgag 12578578  T
Q  191 ggagtggattt----------agtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgt 279  Q
    || ||||||||          |||| |||||| ||||||||||||| ||||| ||||||||  |||| || ||||||||  ||||||||  |||||||||    
T  12578577 ggggtggatttagtcgaatttagtcccacatcggttagataggaagcttgatcagagtttagaaagaggaggcactcctcgccttacaattcgattttgt 12578478  T
Q  280 aagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||||||| || ||||||||||    
T  12578477 aaggatgagttagaccccaaatttcaa 12578451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 97 - 306
Target Start/End: Original strand, 12524440 - 12524650
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    |||||||||| |||||||| |||| || |||||||||||||||||||||||||||||| || |||||||| |||| | |||||| |||||| || | |||    
T  12524440 ttggaaatcctgccccgagtgtgaaggcgtgtgttggtaatcccaccttaattgtgatatgcccctagtttccttgtattggctggtctttaagcgggtg 12524539  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||| | ||| || |||||| |||| | ||||| ||||||||| |||| ||  ||||||| |||||| |||||  |||| ||||| ||||||||| |    
T  12524540 gatttagccccacgtcggttagacaggacgcttgataagagtttataaagaggagccactcctaaccttataagcctgttttataaggatgagttaggac 12524639  T
Q  296 tcaaatttcaa 306  Q
      |||||||||    
T  12524640 ctaaatttcaa 12524650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 306
Target Start/End: Original strand, 12524666 - 12524948
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtga 120  Q
    |||||| ||||||||||||   ||||||| |||| | |||||| || ||||||||||||||||||| |||||||| ||  ||||| | |||||||||| |    
T  12524666 tatccatgatctaccgttg---ggattccacatttccacgcttcattcccattgggtctgagcgtg-gggggtgtgttcaaaatctcaccccgagcgtaa 12524761  T
Q  121 gggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagat 220  Q
    ||||||||| | ||||||||||||||| || ||| |  || ||||| |||| ||||| ||| ||||| |||| || ||||||||| |||||| |||||||    
T  12524762 gggggtgtgattgtaatcccaccttaagtgagatcttcccgtagtttccttgtgttgtcttatctttaagggggtagatttagtcccacatcggttagat 12524861  T
Q  221 aggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| | || || | ||||||| | || ||  ||||||| ||| ||||| ||| |||||||||| ||  ||| ||| ||||||||||    
T  12524862 aggacgcttaataaaagtttataaggaggagacactcctcaccatacaaaccggttttgtaaggatggattatgccccaaatttcaa 12524948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 97 - 282
Target Start/End: Original strand, 14690979 - 14691161
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||||| ||| || ||||||||||||| ||| |    |||||||| || ||     
T  14690979 ttggaaatccctccccgagcatgagggggtgtgttggtaatcctaccttaattgcgatctgcccctagttgccttgtgtcg----gtctttgaaggggta 14691074  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
     |||| ||| |||||| ||||||||||| | ||||| ||||||||| |||| ||  ||||||| ||||||||||||  |||||||||    
T  14691075 aattttgtcccacatcggttagataggacgcttgataagagtttataaagaggagacactcctcaccttacaagccagttttgtaag 14691161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 91 - 303
Target Start/End: Complemental strand, 12518387 - 12518164
Alignment:
Q  91 ggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgag 190  Q
    ||||| ||||||||||| |||||| || ||||||||| ||||||||| |||||||||||| ||| || ||||| ||| ||||||||||||| ||||||||    
T  12518387 ggtgtgttggaaatcccaccccgaacgagagggggtgggttggtaattccaccttaattgcgatctgcccctaattgtcttatgttggcttatctttgag 12518288  T
Q  191 ggagtggattt----------agtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgt 279  Q
    || ||||||||          |||| |||||  ||||||||| ||| ||||| ||||||||| |||| |  ||||||||  ||||||||  || ||||||    
T  12518287 ggggtggatttagtcggatttagtcccacattggttagatagaaagcttgatcagagtttataaagagggggcactcctcgccttacaattcggttttgt 12518188  T
Q  280 aagggtgagttaggcctcaaattt 303  Q
    |||| ||||||||||| |||||||    
T  12518187 aaggatgagttaggccccaaattt 12518164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 122
Target Start/End: Complemental strand, 13788844 - 13788746
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtga 120  Q
    |||||||||||||||||||    ||||||||||| |||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| |||    
T  13788844 tatccaagatctaccgttgc---gattccgcattgcgacgcttcatgcccattgggtctgagcgtgagggtgtgtgttggaaatcccgccccgagcatga 13788748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 184 - 292
Target Start/End: Complemental strand, 37272159 - 37272050
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| |||||||||||   ||||| ||||||||| |||| || |||||||| ||||||||||||| |||||||||    
T  37272159 ctttgagggggtggatttagtcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 37272060  T
Q  283 ggtgagttag 292  Q
    | ||||||||    
T  37272059 gatgagttag 37272050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 184 - 303
Target Start/End: Original strand, 43288254 - 43288374
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||||||||| || |||||| |||||||||||   ||||| ||||||||| ||||| | |||||||| | ||||||| ||| |||||||||    
T  43288254 ctttgagggggtggatttactcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcatcttacaatccggttttgtaag 43288353  T
Q  283 ggtgagttaggcctcaaattt 303  Q
    ||||||||||||| |||||||    
T  43288354 ggtgagttaggccccaaattt 43288374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 12494577 - 12494464
Alignment:
Q  92 gtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagg 191  Q
    |||| ||||||| ||| ||| || || ||||||||| ||||||||| |||||||||||| ||| || ||||| ||| ||||||||||||| ||||||| |    
T  12494577 gtgtgttggaaaacccaccctgaacgagagggggtgggttggtaattccaccttaattgcgatctgcccctaattgtcttatgttggcttatctttgacg 12494478  T
Q  192 gagtggatttagtc 205  Q
    | ||||||||||||    
T  12494477 gggtggatttagtc 12494464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 7135357 - 7135238
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| ||||||||     
T  7135357 ctttgagggggtggatttagtcacacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaa 7135258  T
Q  283 ggtgagttaggcctcaaatt 302  Q
    | ||||||||||| ||||||    
T  7135257 gatgagttaggccccaaatt 7135238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 28910022 - 28910145
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| ||||| || |||||||||   |||   ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  28910022 ctttgagggggtggatttagtcccacataagatagataggactcttgggaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 28910121  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||||| || ||||||||||    
T  28910122 gatgagttagcccccaaatttcaa 28910145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 184 - 308
Target Start/End: Complemental strand, 257381 - 257256
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||  |   ||||  ||||||||| ||||| | |||||||| ||||||| ||||| |||||||||    
T  257381 ctttgagggggtggatttagtcccacatcggatagatattattcttgagaagagtttataaagaggaggcactcctcaccttactagccggttttgtaag 257282  T
Q  283 ggtgagttaggcctcaaatttcaata 308  Q
    | ||||||||||| ||||||||||||    
T  257281 gatgagttaggccccaaatttcaata 257256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 184 - 308
Target Start/End: Original strand, 29780137 - 29780262
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaag 282  Q
    ||||||| ||||||||||||||||||||||  |||||| ||   ||||  ||||||||| |||||  | ||||||| |||||||||| || |||| ||||    
T  29780137 ctttgagagagtggatttagtctcacatcaaatagatatgactcttgagaagagtttataaagaggagacactcctcaccttacaagtcggttttataag 29780236  T
Q  283 ggtgagttaggcctcaaatttcaata 308  Q
    | ||||||||||| ||||||||||||    
T  29780237 gatgagttaggccccaaatttcaata 29780262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 47346196 - 47346094
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||||| ||||||||||  ||||  ||||||||| ||||| | |||||||| ||| ||||||||| ||||||| || ||||||||||    
T  47346196 ggatttagtcccacatcagatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttaggc 47346097  T
Q  295 ctc 297  Q
    |||    
T  47346096 ctc 47346094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 43288522 - 43288643
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    |||||||||  |||||||||| ||||||| ||| |||| ||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  43288522 ctttgaggggatggatttagtttcacatcggtttgataagactcttgacaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 43288621  T
Q  283 ggtgagttaggcctcaaatttc 304  Q
    | | ||||||||| ||||||||    
T  43288622 gattagttaggccccaaatttc 43288643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 1663718 - 1663595
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaa-gag-atgcactccttaccttacaagccgattttgtaa 281  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| || ||| | |||||||| ||||||||||||| ||||||||    
T  1663718 ctttgaggg-gtggatttagtcccacatcggatagatagcactcttgagaagagtttataaaagaggaggcactcctcaccttacaagccggttttgtaa 1663620  T
Q  282 gggtgagttaggcctcaaatttcaa 306  Q
    || ||||||||||| ||||||||||    
T  1663619 ggatgagttaggccccaaatttcaa 1663595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 40703484 - 40703400
Alignment:
Q  225 agattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaata 308  Q
    |||| ||| ||||||||| ||||| | |||||||| |||| |||||||| |||||||||| ||||||||||| ||||||||||||    
T  40703484 agatagatgagagtttataaagaggaggcactcctcacctcacaagccggttttgtaaggatgagttaggccccaaatttcaata 40703400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 43384382 - 43384282
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||||||||    
T  43384382 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggc 43384283  T
Q  295 c 295  Q
    |    
T  43384282 c 43384282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 1661305 - 1661182
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    |||||| || |||||||||||| |||||| | ||||||  |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  1661305 ctttgacggggtggatttagtcccacatcggatagataaaactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 1661206  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
      ||||||||||| ||||||||||    
T  1661205 aatgagttaggccccaaatttcaa 1661182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 6783078 - 6783151
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  6783078 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 6783151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 41670893 - 41670946
Alignment:
Q  253 actccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  41670893 actcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 41670946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 43288394 - 43288473
Alignment:
Q  22 atccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaat 104  Q
    ||||||||||||||||||   |||||||||||| |  ||||| |||||||||||||| |||| |||||| |||| ||||||||    
T  43288394 atccaagatctaccgttg---ggattccgcattgctgcgcttcatgcccattgggtccgagcatgagggtgtgtgttggaaat 43288473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 23396671 - 23396722
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  23396671 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 23396722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 267 - 306
Target Start/End: Complemental strand, 31357704 - 31357665
Alignment:
Q  267 aagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  31357704 aagccgattttgtaaggatgagttaggcctcaaatttcaa 31357665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 40121732 - 40121609
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||  |||||| | ||||||| |   ||||  |||||||||  ||| || |||||||| ||| ||||||||| |||||||||    
T  40121732 ctttgagggggtggatttagttccacatcggatagatagtactcttgagaagagtttatagagaggaggcactcctcaccctacaagccggttttgtaag 40121633  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||| ||| ||||||||||    
T  40121632 gatgagttacgccccaaatttcaa 40121609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 297
Target Start/End: Complemental strand, 47346425 - 47346323
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| |  |||||||||  ||||  ||||||||| ||||| | |||||||| ||| ||||||||| ||||||| || ||||||||||    
T  47346425 ggatttagtcccacatcggaaagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtacggatgagttaggc 47346326  T
Q  295 ctc 297  Q
    |||    
T  47346325 ctc 47346323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 304
Target Start/End: Complemental strand, 6960080 - 6959959
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||  |||||| |||||||||||   ||||| ||||||||| | || || |||||| | ||||||||||| |  ||||||||    
T  6960080 ctttgagggggtggatttagttccacatcggttagataggactcttgataagagtttataacgaggaggcactcttcaccttacaagctgggtttgtaag 6959981  T
Q  283 ggtgagttaggcctcaaatttc 304  Q
    | | ||||||| | ||||||||    
T  6959980 gataagttaggtcacaaatttc 6959959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Original strand, 19843541 - 19843586
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcct 296  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||||    
T  19843541 gcactcctcaccgtacaagccgattttgtaaggatgagttaggcct 19843586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 292
Target Start/End: Original strand, 19843709 - 19843806
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagagat-gcactccttaccttacaagccgattttgtaagggtgagttag 292  Q
    |||||||||| || ||||| |||||||||   ||||  ||||||||| ||||||  |||||||| ||| |||||| ||||||||||||| ||||||||    
T  19843709 ggatttagtcccaaatcagatagataggattcttgagaagagtttataaagagaaagcactcctcaccgtacaagacgattttgtaaggatgagttag 19843806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 27729538 - 27729478
Alignment:
Q  234 agagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
    ||||||||| |||| |||||| |||| ||| |||||||||||||||||||| |||||||||    
T  27729538 agagtttataaagatgatgcaatcctcaccgtacaagccgattttgtaaggatgagttagg 27729478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 6813148 - 6813069
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | |||||||| | || |||||||| |||||| ||| ||||||||||| ||||||||||    
T  6813148 ttgatgagagtttataaagaggaggcactcctcaactcacaagccggttttgtgaggatgagttaggccccaaatttcaa 6813069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 8585149 - 8585204
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| ||||||||||| | |||||||||| |||||||| || ||||||||||    
T  8585149 gcactcctcaccttacaagctggttttgtaaggatgagttagaccccaaatttcaa 8585204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 43168007 - 43167884
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| || ||| | ||||||| |   ||||  ||||||||| |||| || ||| |||| ||||||  ||||| |||||||||    
T  43168007 ctttgagggggtggatttagtcccaaatcggatagatagcactcttgagaagagtttataaagaggaggcaatcctcaccttatgagccggttttgtaag 43167908  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||| ||| ||||||||||    
T  43167907 gatgagttaagccccaaatttcaa 43167884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 306
Target Start/End: Original strand, 28910232 - 28910278
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||||||| |||||||||| |||||||| || ||||||||||    
T  28910232 accttacaagccggttttgtaaggatgagttagcccccaaatttcaa 28910278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 33909139 - 33909241
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | |||||||||   ||||  ||||||||| ||||| || ||||||| ||  ||||||||| ||||||| || ||||||||||    
T  33909139 ggatttagtcccacatcggatagataggattcttgagaagagtttataaagaggatacactcctcactgtacaagccggttttgtatggatgagttaggc 33909238  T
Q  295 ctc 297  Q
    |||    
T  33909239 ctc 33909241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 36092436 - 36092394
Alignment:
Q  253 actccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||||| ||||||||||||| |||||||||| |||||||||||    
T  36092436 actcctcaccttacaagccggttttgtaaggatgagttaggcc 36092394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 36495891 - 36495993
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | |||||||||   ||||  | ||||||| ||||| | |||||||| ||| ||||||||| ||||||| || ||||||||||    
T  36495891 ggatttagtcccacatcggatagataggattcttgagaatagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggc 36495990  T
Q  295 ctc 297  Q
    |||    
T  36495991 ctc 36495993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 8682095 - 8682148
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaata 308  Q
    |||| |||||| |||||||||||||||||  |||||||| ||||||||| ||||    
T  8682095 tcctcaccttataagccgattttgtaaggacgagttaggtctcaaattttaata 8682148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 9378833 - 9378902
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatt 302  Q
    ||||||||| ||||| | ||| ||||| |||||||||||| |||||||||| |||||||| || ||||||    
T  9378833 agagtttataaagaggaggcaatccttgccttacaagccggttttgtaaggatgagttagaccccaaatt 9378902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 23821716 - 23821667
Alignment:
Q  257 cttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||||||||  | |||||||||| ||||||||||| ||||||||||    
T  23821716 cttaccttacaagttggttttgtaaggatgagttaggccccaaatttcaa 23821667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 31374805 - 31374878
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| |||||||| || | ||||||||    
T  31374805 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagaccccgaatttcaa 31374878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 37531027 - 37530926
Alignment:
Q  194 gtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttag 292  Q
    |||||||||||| ||| || | |||||||||   ||||  ||||||||| ||||| | |||||||| | ||||||||||| ||||| |||| ||||||||    
T  37531027 gtggatttagtcccacgtcggatagataggattcttgagaagagtttataaagaggaggcactcctcaacttacaagccggttttgcaaggatgagttag 37530928  T
Q  293 gc 294  Q
    ||    
T  37530927 gc 37530926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 40703697 - 40703644
Alignment:
Q  252 cactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttca 305  Q
    ||||||| |||| |||||||| |||||||||| ||||||||||| | |||||||    
T  40703697 cactcctcacctcacaagccggttttgtaaggatgagttaggcccctaatttca 40703644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 44760571 - 44760499
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | |||||||| ||||| ||||||  |||||||||| ||||||||||| ||||||||||    
T  44760571 agagtttataaagaggaggcactcctcacctttcaagccagttttgtaaggatgagttaggcc-caaatttcaa 44760499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 14991573 - 14991513
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
    ||||||||| ||||| | |||||||| ||| |||||| ||||||||||||| |||||||||    
T  14991573 agagtttataaagaggaggcactcctcaccgtacaagtcgattttgtaaggatgagttagg 14991513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 15421184 - 15421124
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttagg 293  Q
    ||||||||| ||||| | |||||||| ||| |||||| ||||||||||||| |||||||||    
T  15421184 agagtttataaagaggaggcactcctcaccgtacaagtcgattttgtaaggatgagttagg 15421124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 23396883 - 23396927
Alignment:
Q  262 cttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||||| |||||||||| |||||||| || ||||||||||    
T  23396883 cttacaagccggttttgtaaggatgagttagaccccaaatttcaa 23396927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 30296506 - 30296546
Alignment:
Q  114 agcgtgagggggtgtgttggtaatcccaccttaattgtgat 154  Q
    |||||||||||||||||||| ||| || |||||||||||||    
T  30296506 agcgtgagggggtgtgttggaaattccgccttaattgtgat 30296546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 32000884 - 32000920
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcct 296  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  32000884 accttacaagccggttttgtaaggatgagttaggcct 32000920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 40792854 - 40792806
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaattt 303  Q
    |||| |||| ||||||||||||||||||| |||||||| || |||||||    
T  40792854 tcctcacctcacaagccgattttgtaaggatgagttagaccccaaattt 40792806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 43295481 - 43295541
Alignment:
Q  235 gagtttatgaagagatgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    |||||||| |||||  |||||||| ||||||| |||||  ||||||||| |||||||||||    
T  43295481 gagtttataaagagtggcactcctcaccttaccagccggatttgtaaggatgagttaggcc 43295541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 99 - 306
Target Start/End: Complemental strand, 43984522 - 43984307
Alignment:
Q  99 ggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaa--ttgtgatt-----tggccctagttgccttatgttggcttgtctttgagg 191  Q
    ||||||||||||||||  ||||||||||| ||||||||| |||||||||  |||||||      || |||||||||||||||||||||||||||||||||    
T  43984522 ggaaatcccgccccgaatgtgagggggtgggttggtaattccaccttaaaattgtgatgcgatctgcccctagttgccttatgttggcttgtctttgagg 43984423  T
Q  192 gagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagtt 290  Q
    | |||||||||||| |||||| ||||||| ||||| ||||| ||||||||| |||| || |||||||| ||| ||||||||| |||||||||| ||||||    
T  43984422 gggtggatttagtcccacatcggttagattggaagcttgatcagagtttataaagaggaggcactcctcaccatacaagccggttttgtaaggatgagtt 43984323  T
Q  291 aggcctcaaatttcaa 306  Q
    ||||| ||||||||||    
T  43984322 aggccccaaatttcaa 43984307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 60 - 306
Target Start/End: Original strand, 7622170 - 7622407
Alignment:
Q  60 gcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggc 159  Q
    |||| ||||||||||||   ||| |||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||         
T  7622170 gcttcatgcccattgggctagagtgtgaggaggtgtgttggaaatcccgccccgaacgtgagggggtgcgttggtaatcccaccttcattgtgat----- 7622264  T
Q  160 cctagttgccttatgttggcttgtctttgagg-gagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactcc 257  Q
         || ||||| |||||||||||||||||| | |||||||||||| |||||| ||||||||||| | ||||| |||||||||||||| ||   ||||     
T  7622265 ----attccctta-gttggcttgtctttgaggcgggtggatttagtcccacatcggttagataggacgcttgatgagagtttatgaagaggagatactct 7622359  T
Q  258 ttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    | || ||||||||||| ||||||||| |||||||||||| |||||||||    
T  7622360 tcactttacaagccga-tttgtaaggatgagttaggccttaaatttcaa 7622407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 7622023 - 7622150
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtga 120  Q
    ||||||||||||||| |||   |||||||||||| | |||||| |||||||||||||  ||| |||||||||||| |||||||||||||||| | |||||    
T  7622023 tatccaagatctacccttg---ggattccgcattgccacgcttcatgcccattgggtaagagtgtgagggggtgtgttggaaatcccgccccaaacgtga 7622119  T
Q  121 gggggtgtgttggtaatcccaccttaattgt 151  Q
    ||||||||||||||||||||||||| |||||    
T  7622120 gggggtgtgttggtaatcccaccttcattgt 7622150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 97 - 306
Target Start/End: Original strand, 7621805 - 7622007
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtg 196  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| | ||        || | ||| |||    
T  7621805 ttggaaaacccgccccaagcgtgagggggtgcgttggtaatcccaccttaattgtgatttgtccctagttgacttgtttt--------ttagggggggtg 7621896  T
Q  197 gatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||||||| ||| || |||||||| || | ||||| |||||||||  ||| ||  |||||||  ||||| |||  |||||||||||| |||||||||||    
T  7621897 gatttagtcccacgtcggttagatatgacgcttgataagagtttatagagaggagacactcctctccttataagttgattttgtaaggatgagttaggcc 7621996  T
Q  296 tcaaatttcaa 306  Q
     ||||||||||    
T  7621997 ccaaatttcaa 7622007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 43 - 136
Target Start/End: Complemental strand, 21505182 - 21505089
Alignment:
Q  43 ggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaa 136  Q
    |||||| ||||| | || ||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  21505182 ggattcagcattgccacacttcatgcccattgggtccgagcgtgagggggtgttttggaaatcccgccccgagcgttagggggtgtgttggtaa 21505089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 9091322 - 9091228
Alignment:
Q  128 tgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagatag 222  Q
    ||||||||||| ||||||||||| ||| || |||||||||  |||||||| |||||||||||||| ||||||||||||||||||| |||||||||    
T  9091322 tgttggtaatcacaccttaattgcgatctgcccctagttgttttatgttgacttgtctttgagggggtggatttagtctcacatcggttagatag 9091228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 34248349 - 34248470
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||  |||||||||||   ||||| ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  34248349 ctttgagggggtggatttagtcccacattggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 34248448  T
Q  283 ggtgagttaggcctcaaatttc 304  Q
    | ||||||||||| ||||||||    
T  34248449 gatgagttaggccccaaatttc 34248470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 3537772 - 3537904
Alignment:
Q  58 acgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttg 157  Q
    |||||| ||||||||||||||| ||| |||||| |||| ||||||||| |||||  ||| ||||||  |||||||||||||||| |||||||||||| ||    
T  3537772 acgcttcatgcccattgggtcttagcatgagggtgtgtgttggaaatctcgccctaagcatgagggt-tgtgttggtaatcccatcttaattgtgatatg 3537870  T
Q  158 gccctagttgccttatgttggcttgtctttgagg 191  Q
     ||||| |||  || |||||||||||| ||||||    
T  3537871 tccctaattggtttgtgttggcttgtcattgagg 3537904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 194 - 302
Target Start/End: Original strand, 34248077 - 34248186
Alignment:
Q  194 gtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttag 292  Q
    |||||||||||| |||||| |||||||||||   ||||| ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||||||    
T  34248077 gtggatttagtcccacatcggttagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttag 34248176  T
Q  293 gcctcaaatt 302  Q
    ||| ||||||    
T  34248177 gccccaaatt 34248186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 18905846 - 18905969
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  18905846 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 18905945  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  18905946 gatgagttaggccccaaatttcaa 18905969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 32931391 - 32931514
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||  |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  32931391 ctttgagggggtggatttagtcccacatcggatagatatcattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 32931490  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  32931491 gatgagttaggccccaaatttcaa 32931514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 21085262 - 21085139
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||| | ||||||||     
T  21085262 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgtaat 21085163  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  21085162 gatgagttaggccccaaatttcaa 21085139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 36993993 - 36993938
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  36993993 gcactcctcaccttacaagccggttttgtaaggatgagttaggcctcaaatttcaa 36993938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 36997200 - 36997279
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | |||||||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  36997200 ttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 36997279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 36037224 - 36037305
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaata 308  Q
    ||||| ||||||||| ||||| |||||||||| |||| |||||||| |||||||||| |||||||| || ||||||||||||    
T  36037224 ttgatgagagtttataaagaggatgcactcctcacctcacaagccggttttgtaaggatgagttagaccccaaatttcaata 36037305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 35908680 - 35908782
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| |||||| | |||||||||   ||||  ||||||||| |||||| | ||||||| ||| ||||||||| |||||||||| ||||||||||    
T  35908680 ggatttagtcccacatcgggtagataggatacttgagaagagtttataaagagaaggcactcctcaccgtacaagccggttttgtaaggatgagttaggc 35908779  T
Q  295 ctc 297  Q
    |||    
T  35908780 ctc 35908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 10989098 - 10989025
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  10989098 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 10989025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 10989305 - 10989232
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  10989305 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 10989232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 43599351 - 43599424
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  43599351 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 43599424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 36994143 - 36994095
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccacctt 145  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  36994143 ttggaaattctgccccgagcgtgagggggtgtgtcggtaatcccacctt 36994095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 43984168 - 43984116
Alignment:
Q  174 gttggcttgtctttgagggagtggatttagtctcacatcagttagataggaag 226  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||| |||||    
T  43984168 gttggcttgtctttgagggggtggatttagtcccacatcggttagattggaag 43984116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 16454677 - 16454626
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  16454677 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 16454626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 20298630 - 20298507
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||  | ||||||  |   ||||  ||||||||| ||||| | |||||||| ||||||||||| | ||||||||     
T  20298630 ctttgagggggtggatttagtcccacatttgatagatattattcttgagaagagtttataaagaggaggcactcctcaccttacaagctggttttgtaat 20298531  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  20298530 gatgagttaggccccaaatttcaa 20298507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 21653862 - 21653913
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatt 302  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||| ||||||    
T  21653862 gcactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatt 21653913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 43984291 - 43984236
Alignment:
Q  21 tatccaagatctaccgttgtcgggattccgcattacgacgcttgatgcccattggg 76  Q
    |||||| |||||| |||||||||||||||||||| | |||||| ||||||||||||    
T  43984291 tatccaggatctaacgttgtcgggattccgcattgccacgcttcatgcccattggg 43984236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 297
Target Start/End: Complemental strand, 17607320 - 17607214
Alignment:
Q  192 gagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagtt 290  Q
    ||||||||||||||||||||| | |||||||||   |||   ||||||||| |||| || ||||| || ||| ||||||||  |||||||||| ||||||    
T  17607320 gagtggatttagtctcacatcggatagataggattcttgtgaagagtttataaagaggaggcactactcaccgtacaagccagttttgtaaggatgagtt 17607221  T
Q  291 aggcctc 297  Q
    |||||||    
T  17607220 aggcctc 17607214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 3183975 - 3183902
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||| | ||||||||||| ||||||||||    
T  3183975 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaacgatgagttaggccccaaatttcaa 3183902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 15011093 - 15011020
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||| ||| ||||||||||    
T  15011093 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaagccccaaatttcaa 15011020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 20760724 - 20760651
Alignment:
Q  234 agagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| |||| || ||| |||| ||||||||| ||| |||||||||| ||||||||||| ||||||||||    
T  20760724 agagtttataaagatgaggcaatcctcaccttacaaaccggttttgtaaggatgagttaggccccaaatttcaa 20760651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 221
Target Start/End: Original strand, 38074078 - 38074203
Alignment:
Q  96 attggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagt 195  Q
    |||||||||| |  || ||||||||||| | ||||| ||||| ||||||||||| |||| || | || |||| ||| ||||| ||||| ||| | || ||    
T  38074078 attggaaatctcatcctgagcgtgagggagcgtgttagtaattccaccttaattatgatatgtctctggttgtcttgtgttgacttgtttttaaaggggt 38074177  T
Q  196 ggatttagtctcacatcagttagata 221  Q
    | |||||||| ||||| |||||||||    
T  38074178 gaatttagtcccacattagttagata 38074203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 40902457 - 40902384
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| | ||||||||| ||||||||||    
T  40902457 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggataagttaggccccaaatttcaa 40902384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 43984580 - 43984531
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccacctta 146  Q
    |||||||||||||||||| | |||||||||| ||||||||| ||||||||    
T  43984580 ttggaaatcccgccccgaacatgagggggtgggttggtaattccacctta 43984531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 23027942 - 23027822
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||  | ||||||| |   ||||  |||| |||| ||||| | |||||||| ||||||||||||| |||| ||||    
T  23027942 ctttgagggggtggatttagtcccacataggatagatagaactcttgagaagagcttataaagaggaggcactcctcaccttacaagccggttttttaag 23027843  T
Q  283 ggtgagttaggcctcaaattt 303  Q
      ||||||||||| |||||||    
T  23027842 aatgagttaggccccaaattt 23027822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 8559643 - 8559690
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatt 302  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||    
T  8559643 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatt 8559690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 299
Target Start/End: Original strand, 13655182 - 13655221
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaa 299  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  13655182 accttacaagccgattttgtaaggatgagttaagcctcaa 13655221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 299
Target Start/End: Original strand, 13713824 - 13713863
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaa 299  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  13713824 accttacaagccgattttgtaaggatgagttaagcctcaa 13713863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 15010863 - 15010812
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||| ||||| ||||||||||| ||||||||||    
T  15010863 tcctcaccttacaagccggttttataaggatgagttaggccccaaatttcaa 15010812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 21653385 - 21653440
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| || ||||||||||||| |||||||||| ||||||||||  ||||||||||    
T  21653385 gcacttctcaccttacaagccggttttgtaaggatgagttaggctccaaatttcaa 21653440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 306
Target Start/End: Complemental strand, 30176534 - 30176455
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | |||||| | |||| |||||||| |||||||||| ||||||||||| | ||||||||    
T  30176534 ttgatgagagtttataaagaggaggcactcttcacctcacaagccggttttgtaaggatgagttaggccccgaatttcaa 30176455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 42228811 - 42228870
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttag 292  Q
    ||||||||| ||||| | ||| |||| |||||||||||||||||||||||| ||||||||    
T  42228811 agagtttataaagaggaggcaatcctcaccttacaagccgattttgtaaggatgagttag 42228870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 3538058 - 3538132
Alignment:
Q  234 agagtttatgaaga-gatgcactccttaccttacaagccga-ttttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| |||| |||||||||||| ||||||||||| | |||||||||| | ||||||||  ||||||||||    
T  3538058 agagtttataaagatgatgcactccttgccttacaagccaatttttgtaaggataagttaggctccaaatttcaa 3538132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 44440954 - 44440990
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcct 296  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  44440954 accttacaagccgattttggaaggatgagttaggcct 44440990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 149 - 300
Target Start/End: Original strand, 1468917 - 1469068
Alignment:
Q  149 tgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga- 247  Q
    |||||| || ||||||||||||||| |||||||||||||||||| ||||| |||||| |||||| ||||||||||||| ||||| ||||| ||| ||||     
T  1468917 tgtgatctgcccctagttgccttatattggcttgtctttgagggggtgga-ttagtcccacatcggttagataggaagcttgatcagagtatataaagag 1469015  T
Q  248 gatgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaa 300  Q
    ||  |||||||  |||||||||||| |||||||||| ||||||||||| ||||    
T  1469016 gagacactcctcgccttacaagccggttttgtaaggatgagttaggccccaaa 1469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 114 - 212
Target Start/End: Complemental strand, 28072100 - 28072003
Alignment:
Q  114 agcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatc 212  Q
    |||||||||||||||||  |||||  ||||||||||| ||| || |||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  28072100 agcgtgagggggtgtgtaagtaatatcaccttaattgcgatctgcccctagttgccttatgttggcttgtcattgaggg-gtggatttagtctcacatc 28072003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 1469155 - 1469286
Alignment:
Q  73 tgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtgagggggtgtgttggtaatcccacctt--aattgt-----gatttggccctagt 165  Q
    |||| |||||||||||||||||| ||||||||||||||| ||  ||||||||||| ||||||||| |||||||  ||||||     ||| || |||||||    
T  1469155 tgggcctgagcgtgagggggtgtgttggaaatcccgccctgaatgtgagggggtgggttggtaattccaccttaaaattgtgatgcgatctgcccctagt 1469254  T
Q  166 tgccttatgttggcttgtctttgagggagtgg 197  Q
    || |||||||||||||||||||||||| ||||    
T  1469255 tgtcttatgttggcttgtctttgagggggtgg 1469286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 18779573 - 18779679
Alignment:
Q  25 caagatctaccgttgtcgggattccgcattacgacgcttgatgcccattgggtctgagcgtgagggggtgtattggaaatcccgccccgagcgtgagggg 124  Q
    ||||||||||||||||||||||| ||| || | |||||| |||| ||||||| ||||||||||| | ||||  ||||||||||||||||||| |||||||    
T  18779573 caagatctaccgttgtcgggatttcgcgttgccacgcttcatgctcattggggctgagcgtgagagagtgt-gtggaaatcccgccccgagcatgagggg 18779671  T
Q  125 gtgtgttg 132  Q
    ||||||||    
T  18779672 gtgtgttg 18779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 302
Target Start/End: Complemental strand, 10418452 - 10418333
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||| ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  10418452 ctttgagggggtggatttagtcccacatcggatagatagcactcttgatgagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 10418353  T
Q  283 ggtgagttaggcctcaaatt 302  Q
    | ||||||||||| ||||||    
T  10418352 gatgagttaggccccaaatt 10418333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 24055223 - 24055100
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| |||| || |||||||| ||||||||||||| |||||||||    
T  24055223 ctttgagggggtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagacgaggcactcctcaccttacaagccggttttgtaag 24055124  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  24055123 gatgagttaggccccaaatttcaa 24055100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 28072647 - 28072522
Alignment:
Q  123 gggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctttgagggagtggatttagtctcacatcagttagatag 222  Q
    ||||| ||||||||||||||||||||||  || || | ||||||||||| |||||  |||||||||| || |||||||||||| |||||| ||||||||     
T  28072647 gggtgggttggtaatcccaccttaattgctatctgcctctagttgccttgtgttgatttgtctttgaaggggtggatttagtcccacatcggttagataa 28072548  T
Q  223 gaagattgattagagtttatgaagag 248  Q
    || | ||||  ||||||||| |||||    
T  28072547 gacgcttgacaagagtttataaagag 28072522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 222 - 304
Target Start/End: Complemental strand, 27914402 - 27914319
Alignment:
Q  222 ggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttc 304  Q
    ||||| ||||| ||||||||| ||||| | |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  27914402 ggaagcttgatcagagtttataaagaggaggcactccttaccttacaagccggttttgtaaggatgagttaggccccaaatttc 27914319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 184 - 304
Target Start/End: Original strand, 8144008 - 8144128
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||| | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  8144008 ctttgaggg-gtggatttagtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 8144106  T
Q  283 ggtgagttaggcctcaaatttc 304  Q
    | ||||||||||| ||||||||    
T  8144107 gatgagttaggccccaaatttc 8144128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 1744956 - 1744833
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||||| |||||| |||||  | ||||||| |   ||||  ||||||||| ||||| | |||||||| ||||||||||||| |||||||||    
T  1744956 ctttgagggggtggagttagtcccacattggatagatagtactcttgaaaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaag 1744857  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  1744856 gatgagttaggccccaaatttcaa 1744833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 184 - 306
Target Start/End: Original strand, 19054483 - 19054606
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||||| |||||| |||||| | ||||||  |   ||||  ||||||||| |||| || |||||||| ||||||||||||| |||||||||    
T  19054483 ctttgagggggtggaattagtcccacatcggatagataacactcttgagaagagtttataaagatgaggcactcctcaccttacaagccggttttgtaag 19054582  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | |||||||| || ||||||||||    
T  19054583 gatgagttagtccccaaatttcaa 19054606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 28149827 - 28149906
Alignment:
Q  228 ttgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||| ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  28149827 ttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 28149906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 19712441 - 19712395
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  19712441 accttacaagccgattttgtaaggatgagttaggccccaaatttcaa 19712395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 10733483 - 10733430
Alignment:
Q  252 cactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttca 305  Q
    ||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||    
T  10733483 cactcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttca 10733430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 16877074 - 16877001
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  16877074 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 16877001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 17147968 - 17147896
Alignment:
Q  235 gagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  17147968 gagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggccacaaatttcaa 17147896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 12134597 - 12134474
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaag 282  Q
    |||||| || ||||| |||||| |||||| | ||||||| |   ||||  ||||||||| |||||  | ||||||| ||||||||| ||| |||||||||    
T  12134597 ctttgacggggtggacttagtcccacatcggatagatagcactcttgagaagagtttataaagaggagacactcctaaccttacaaaccggttttgtaag 12134498  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | ||||||||||| ||||||||||    
T  12134497 gatgagttaggccccaaatttcaa 12134474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 16876872 - 16876821
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  16876872 tcctcaccttacaagccggttttgtaaggatgagttaggccccaaatttcaa 16876821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 21067171 - 21067048
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| || ||| | ||||||| |   ||||  ||||||||| ||||| | ||||||||  |||||||||||| ||||||||     
T  21067171 ctttgagggggtggatttagtcccatatcggatagatagcattcttgagaagagtttataaagaggaggcactcctccccttacaagccggttttgtaaa 21067072  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | || |||||||| ||||||||||    
T  21067071 gatgtgttaggccccaaatttcaa 21067048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 184 - 306
Target Start/End: Complemental strand, 21088962 - 21088839
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| || ||| | ||||||| |   ||||  ||||||||| ||||| | ||||||||  |||||||||||| ||||||||     
T  21088962 ctttgagggggtggatttagtcccatatcggatagatagcattcttgagaagagtttataaagaggaggcactcctccccttacaagccggttttgtaaa 21088863  T
Q  283 ggtgagttaggcctcaaatttcaa 306  Q
    | || |||||||| ||||||||||    
T  21088862 gatgtgttaggccccaaatttcaa 21088839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 12124749 - 12124695
Alignment:
Q  252 cactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||| | ||||||||| |||||||||||| ||||||||||| ||||||||||    
T  12124749 cactcctcatcttacaagctgattttgtaaggatgagttaggccccaaatttcaa 12124695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 306
Target Start/End: Original strand, 30539226 - 30539348
Alignment:
Q  185 tttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaagg 283  Q
    |||||||| ||| |||||||| |||||| | |||||| ||   ||||| ||||||||| |||  ||  ||||||| ||||||||||||| ||||||||||    
T  30539226 tttgagggggtgaatttagtcccacatcggatagataagactcttgataagagtttataaaggcgagacactcctcaccttacaagccggttttgtaagg 30539325  T
Q  284 gtgagttaggcctcaaatttcaa 306  Q
     |||  |||||| ||||||||||    
T  30539326 atgaactaggccccaaatttcaa 30539348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 15101175 - 15101102
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||||| ||||||||||| | ||||||||    
T  15101175 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcccccaatttcaa 15101102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 184 - 295
Target Start/End: Complemental strand, 31987 - 31875
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaaga-gatgcactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| ||||||||||||  ||||| | |||||| ||   ||||| ||||||||| |||| || |||||||| | ||||||||||  |||||||||    
T  31987 ctttgagggggtggatttagtccaacatcggatagataagactcttgataagagtttataaagacgaggcactcctcaacttacaagccagttttgtaag 31888  T
Q  283 ggtgagttaggcc 295  Q
    | | |||||||||    
T  31887 gattagttaggcc 31875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 11313424 - 11313373
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||  |||||||||| ||||||||||| ||||||||||    
T  11313424 tcctcaccttacaagccagttttgtaaggatgagttaggccccaaatttcaa 11313373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 294
Target Start/End: Complemental strand, 19753718 - 19753607
Alignment:
Q  184 ctttgagggagtggatttagtctcacatcagttagataggaagattgattagagtttatgaagagatg-cactccttaccttacaagccgattttgtaag 282  Q
    ||||||||| |||||||||||| |||||    |||||||||   ||||  ||||||||| |||||| | ||||||| |||||||||| || || ||||||    
T  19753718 ctttgagggggtggatttagtcccacatggtatagataggactcttgagaagagtttataaagagaagacactcctcaccttacaagacggttctgtaag 19753619  T
Q  283 ggtgagttaggc 294  Q
    | ||||||||||    
T  19753618 gatgagttaggc 19753607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 24558645 - 24558696
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||||| |||||| ||| ||||||||||| ||||||||||    
T  24558645 tcctcaccttacaagccggttttgtgaggatgagttaggccccaaatttcaa 24558696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 24558850 - 24558901
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| ||||||||||| | |||||||||| ||||||||||| ||||||||||    
T  24558850 tcctcaccttacaagctggttttgtaaggatgagttaggccccaaatttcaa 24558901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 23591596 - 23591634
Alignment:
Q  260 accttacaagccgattttgtaagggtgagttaggcctca 298  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  23591596 accttacaagccgattttgtaaggatgagttagacctca 23591634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 297
Target Start/End: Original strand, 25184212 - 25184314
Alignment:
Q  196 ggatttagtctcacatcagttagataggaagattgattagagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggc 294  Q
    |||||||||| | |||| | |||||||||   ||||| ||||||||| ||||| | ||| |||| ||||||||||||| ||||||  || ||||||||||    
T  25184212 ggatttagtcccgcatcggatagataggattcttgataagagtttataaagaggaagcaatcctcaccttacaagccggttttgtggggatgagttaggc 25184311  T
Q  295 ctc 297  Q
    |||    
T  25184312 ctc 25184314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 186
Target Start/End: Original strand, 5556974 - 5557062
Alignment:
Q  97 ttggaaatcccgccccgagcgtgagggggtgtgttggtaatcccaccttaattgtgatttggccctagttgccttatgttggcttgtctt 186  Q
    |||||||| |||| || ||||||| |||||||||||||| ||  ||||| |||| |||||  |||| |||| ||| ||||||||||||||    
T  5556974 ttggaaattccgctccaagcgtgatggggtgtgttggtagtctaacctttattgcgattt-tcccttgttgtcttgtgttggcttgtctt 5557062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 19712673 - 19712604
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatt 302  Q
    ||||||||| ||||| | ||| |||| ||||||||||| | |||||||||| ||||||||||| ||||||    
T  19712673 agagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggccccaaatt 19712604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 18286656 - 18286700
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcc 295  Q
    ||||| || |||||||||||| ||||||||||| |||||||||||    
T  18286656 gcactgctcaccttacaagccaattttgtaaggatgagttaggcc 18286700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 21327 - 21254
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||  | |||||||||| ||||||||||||||||||||||    
T  21327 agagtttataaagaggaggcaatcctcaccttacaagttggttttgtaaggatgagttaggcctcaaatttcaa 21254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 1919 - 1864
Alignment:
Q  251 gcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||||| | ||||||||||||| |||||||||  |||||||| |||||||||||||    
T  1919 gcactcttcaccttacaagccggttttgtaagcatgagttagacctcaaatttcaa 1864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 2121 - 2073
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaattt 303  Q
    |||| ||||||||||||  |||||||||| ||||||||||| |||||||    
T  2121 tcctcaccttacaagccagttttgtaaggatgagttaggccccaaattt 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 2538 - 2589
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    |||| |||| |||||||| |||||||||| |||||||| |||||||||||||    
T  2538 tcctcacctcacaagccggttttgtaaggttgagttagacctcaaatttcaa 2589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 299
Target Start/End: Complemental strand, 2792 - 2748
Alignment:
Q  255 tccttaccttacaagccgattttgtaagggtgagttaggcctcaa 299  Q
    |||| |||| |||||||| |||||||||| |||||||||||||||    
T  2792 tcctcacctcacaagccggttttgtaaggttgagttaggcctcaa 2748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 3011 - 2938
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| || |||||||| | |||||||||| ||||||||||| ||||||||||    
T  3011 agagtttataaagaggaggcaatcctcactttacaagctggttttgtaaggatgagttaggccccaaatttcaa 2938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 13346 - 13419
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatttcaa 306  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||| ||| ||||||||||| | ||||||||    
T  13346 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtgaggatgagttaggccccgaatttcaa 13419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 76892 - 76961
Alignment:
Q  234 agagtttatgaagag-atgcactccttaccttacaagccgattttgtaagggtgagttaggcctcaaatt 302  Q
    ||||||||| ||||| | ||| |||| ||||||||||||| |||||||| | ||||||||||| ||||||    
T  76892 agagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaagatgagttaggccccaaatt 76961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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