View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20336_low_3 (Length: 507)
Name: NF20336_low_3
Description: NF20336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20336_low_3 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 405; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 17 - 497
Target Start/End: Original strand, 44924348 - 44924820
Alignment:
| Q |
17 |
caggtataccatcaaaataagcaatatcaaacagctaaagcctaaataatgttctcttacacgcagcatcaagtaaaaggttcaattatcacaaagatca |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44924348 |
caggtataccatcaaaataagcaatatcaaacagctaaa-------taatattctcttacacgcagcatcaagtaaaaggttcaattatcacaaagatca |
44924440 |
T |
 |
| Q |
117 |
tcaaatgtattggagcaaaacttaatacttagaaaagaaaagatnnnnnnncaacatgtctcgagcaaagatttcctcacacaataaacagggatggaaa |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44924441 |
tcaaatgtattggagcaaaacttaatacttagaaaagaaaggataaaaaa-caacatgtctcgagcaaagatttcctcacacaataaacagggatggaaa |
44924539 |
T |
 |
| Q |
217 |
atggtaaaagtcatttgcatgatagaaaatctaaagtctaggacagatataaaaaggctagagcaaggatctaagcaaaagaaaatcataatttaatctt |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
44924540 |
atggtaaaagtcatttgcatgatagaaaatctaaagtctaggacagatataaaaaggctagagcaaggatctaagcaaaatgaaatcataatttaatctt |
44924639 |
T |
 |
| Q |
317 |
catcctcctcatcaccgtcaccaccggaagccttcttggctgcagcctttaagttctttcgcttcacacgatcaggaagaccaccgccgaaaggacttgt |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
44924640 |
catcctcctcatcaccgtcaccaccggaagccttcttggctgcagcctttaagttctttcacttcacacgaccaggaagaccaccgccgaaaggacttgt |
44924739 |
T |
 |
| Q |
417 |
gagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccacctgcctcccaaccctatg |
497 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44924740 |
gagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccacctgcctcccaaccctatg |
44924820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 19 - 497
Target Start/End: Original strand, 6908377 - 6908847
Alignment:
| Q |
19 |
ggtataccatcaaaataagcaatatcaaacagctaaagcctaaataatgttctcttacacgcagcatcaagtaaaaggttcaattatcacaaagatcatc |
118 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6908377 |
ggtataccataaaaacaagcaatatcaaacagctaaa-------taatattctcttacacacagcatcaagtaaaaagttcaattatcacaaagatcatc |
6908469 |
T |
 |
| Q |
119 |
aaatgtattggagcaaaacttaatacttagaaaagaaaagatnnnnnnncaacatgtctcgagcaaagatttcctcacacaataaacagggatgg-aaaa |
217 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
6908470 |
aaatgtattggagcaaaact-aatacttagaaaagaaaagatcaaaaa-caacatgtcttgagcaaagatttcctcacacaataaacagggatgggaaaa |
6908567 |
T |
 |
| Q |
218 |
tggtaaaagtcatttgcatgatagaaaatctaaagtctaggacagatataaaaaggctagagcaaggatctaagcaaaagaaaatcataatttaatcttc |
317 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6908568 |
tggtaaaagtcatttgcatgacagaaaatctaaagtctagggcagatataaaaaggctagagcaaggatctaagcaaaagaaaatcataatttaatcttc |
6908667 |
T |
 |
| Q |
318 |
atcctcctcatcaccgtcaccaccggaagccttcttggctgcagcctttaagttctttcgcttcacacgatcaggaagaccaccgccgaaaggacttgtg |
417 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6908668 |
atcctcctcatcaccatcaccaccggaagccttcttggctgcagcctttaagttctttcgtttcacacgaccaggaagaccaccgccgaaaggacttgtg |
6908767 |
T |
 |
| Q |
418 |
agtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccacctgcctcccaaccctatg |
497 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6908768 |
agtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccacctgcctcccaaccctatg |
6908847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 233 - 497
Target Start/End: Complemental strand, 6901692 - 6901428
Alignment:
| Q |
233 |
gcatgatagaaaatctaaagtctaggacagatataaaaaggctagagcaaggatctaagcaaaagaaaatcataatttaatcttcatcctcctcatcacc |
332 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
6901692 |
gcatgatagaaaatctaaagtctaggacagatataaaaaggcgagagcaaggatctaagaaaatgaaaatcataatttaatcttcatcctcctcatcacc |
6901593 |
T |
 |
| Q |
333 |
gtcaccaccggaagccttcttggctgcagcctttaagttctttcgcttcacacgatcaggaagaccaccgccgaaaggacttgtgagtgaaaagtcaatg |
432 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
6901592 |
atcaccaccggaagccttcttggctgcagccttaaggttcttacgcttcacacgaccaggaagaccaccaccgaatggacttgtgagtgaaaagtcaatg |
6901493 |
T |
 |
| Q |
433 |
tgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccacctgcctcccaaccctatg |
497 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| ||||| |
|
|
| T |
6901492 |
tgcttctgtgaatcaacccttaccatgaaggatgggatgttaacaacctgcctcccaactctatg |
6901428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 307 - 494
Target Start/End: Original strand, 44927080 - 44927267
Alignment:
| Q |
307 |
atttaatcttcatcctcctcatcaccgtcaccaccggaagccttcttggctgcagcctttaagttctttcgcttcacacgatcaggaagaccaccgccga |
406 |
Q |
| |
|
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | |||||||| |||||| ||| ||||||||||||| || | |
|
|
| T |
44927080 |
atttaatcttcatcctcctcatctccatcaccaccggaagccttcttggctgcagccttaaggttctttcacttcacgcgaccaggaagaccaccaccaa |
44927179 |
T |
 |
| Q |
407 |
aaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccacctgcctcccaaccct |
494 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
44927180 |
agggacttgtgagggaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttaacaacctgcctcccaaccct |
44927267 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 6901816 - 6901713
Alignment:
| Q |
58 |
ctaaataatgttctcttacacgcagcatcaagtaaaaggttcaattatcacaaagatcat-caaatgtattggagcaaaacttaatacttagaaaagaaa |
156 |
Q |
| |
|
||||||||| ||||||||||| || ||||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
6901816 |
ctaaataatattctcttacacacaccatcaggtaaaaggttcaattataacaaagataattcaaatgtattggagcaaaacttaatacttggaaaagaaa |
6901717 |
T |
 |
| Q |
157 |
agat |
160 |
Q |
| |
|
|||| |
|
|
| T |
6901716 |
agat |
6901713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 377; Significance: 0; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 19 - 497
Target Start/End: Complemental strand, 202610 - 202138
Alignment:
| Q |
19 |
ggtataccatcaaaataagcaatatcaaacagctaaagcctaaataatgttctcttacacgcagcatcaagtaaaaggttcaattatcacaaagatcatc |
118 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
202610 |
ggtataccatcaaaacaagcaatatcaaacagctaaa-------taatattctcttacacagagcatcaagtaaaaggttcaatcatcacaaagatcatc |
202518 |
T |
 |
| Q |
119 |
aaatgtattggagcaaaacttaatacttagaaaagaaaagatnnnnnnncaacatgtctcgagcaaagatttcctcacacaataaacagggatgg-aaaa |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
202517 |
aaatgtattggagcaaaacttaatacttagaaaagaaaagatcaaaaa-caacatgtctcgagcaaagatttcctcacacaataaacagggatgggaaaa |
202419 |
T |
 |
| Q |
218 |
tggtaaaagtcatttgcatgatagaaaatctaaagtctaggacagatataaaaaggctagagcaaggatctaagcaaaagaaaatcataa-tttaatctt |
316 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
202418 |
tggtaaaagtcatttgcatgacagaaaatctaaagtctagggcagatataaaaaggctagagcaaggatctaagcaaaagaaaatcataaatttaatctt |
202319 |
T |
 |
| Q |
317 |
catcctcctcatcaccgtcaccaccggaagccttcttggctgcagcctttaagttctttcgcttcacacgatcaggaagaccaccgccgaaaggacttgt |
416 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
202318 |
catcctcctcatcaccatcaccaccggaagccttcttggctgcagcctttaagttctttcgcttcacacgaccaggaagaccaccgccgaaaggacttgt |
202219 |
T |
 |
| Q |
417 |
gagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccacctgcctcccaaccctatg |
497 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
202218 |
gagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccacctgcctcccaaccctatg |
202138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 58 - 497
Target Start/End: Original strand, 206521 - 206961
Alignment:
| Q |
58 |
ctaaataatgttctcttacacgcagcatcaagtaaaaggttcaattatcacaaagatcatc-aaatgtattggagcaaaacttaatacttagaaaagaaa |
156 |
Q |
| |
|
||||||||| ||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
206521 |
ctaaataatattctcttacacacaccatcaagtaaaaggttcaattataacaaagatcatttaaatgtattggagcaaaacttaatacttggaaaagaaa |
206620 |
T |
 |
| Q |
157 |
agatnnnnnnncaacatgtctcgagcaaagatttcctcacacaataaacagggatgg-aaaatggtaaaagtcatttgcatgatagaaaatctaaagtct |
255 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
206621 |
agatcaaaaa-caacatgtctcaagcaaagatttcctcacacaataaacagggatgggaaaacggtaaaagtcatttgcatgatagaaaatctaaagtct |
206719 |
T |
 |
| Q |
256 |
aggacagatataaaaaggctagagcaaggatctaagcaaaagaaaatcataatttaatcttcatcctcctcatcaccgtcaccaccggaagccttcttgg |
355 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
206720 |
aggacagatataaaaaggctagagcaaggatctaagaaaatgaaaatcataatttaatcttcatcctcctcatcaccatcaccaccggaagccttcttgg |
206819 |
T |
 |
| Q |
356 |
ctgcagcctttaagttctttcgcttcacacgatcaggaagaccaccgccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcac |
455 |
Q |
| |
|
|||||||||| | |||||| |||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
206820 |
ctgcagccttaaggttcttacgcttcacacgaccaggaagaccaccaccgaatggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaacccttac |
206919 |
T |
 |
| Q |
456 |
catgaaggatgggatgttcaccacctgcctcccaaccctatg |
497 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
206920 |
catgaaggatgggatgttcacaacctgcctcccaaccctatg |
206961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 285; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 117 - 494
Target Start/End: Complemental strand, 24653035 - 24652658
Alignment:
| Q |
117 |
tcaaatgtattggagcaaaacttaatacttagaaaagaaaagatnnnnnnncaacatgtctcgagcaaagatttcctcacacaataaacagggatgg-aa |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||| || |
|
|
| T |
24653035 |
tcaaatgtattggagcaaaacttaatacttggaaaagaaaagatcaaaaa-caacatgttttgagcaaagatttcctcacacaataaacagggatgggaa |
24652937 |
T |
 |
| Q |
216 |
aatggtaaaagtcatttgcatgatagaaaatctaaagtctaggacagatataaaaaggctagagcaaggatctaagcaaaagaaaatcataatttaatct |
315 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
24652936 |
aacggtaaaagtcatttgcatgatagaaaatctaaagtctaggacagatataaaaaggctagagcaaggatctaagaaaatgaaaatcataatttaatct |
24652837 |
T |
 |
| Q |
316 |
tcatcctcctcatcaccgtcaccaccggaagccttcttggctgcagcctttaagttctttcgcttcacacgatcaggaagaccaccgccgaaaggacttg |
415 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||| ||||| ||||||| |
|
|
| T |
24652836 |
tcatcctcctcatcaccatcaccaccggaagccttcttggctgcagccttaaggttcttacgcttcacacgaccaggaagaccaccaccgaatggacttg |
24652737 |
T |
 |
| Q |
416 |
tgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccacctgcctcccaaccct |
494 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24652736 |
tgagtgaaaagtcaatgtgcttctgtgaatcaacccttaccatgaaggatgggatgttcacaacctgcctcccaaccct |
24652658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 263; Significance: 1e-146; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 87 - 494
Target Start/End: Complemental strand, 29514747 - 29514334
Alignment:
| Q |
87 |
aagtaaaaggttcaattatcacaaagatcatcaaatgtattggagcaaaacttaatacttagaaaagaaaagatnnnnnnncaacatgtctcgagcaaag |
186 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||| |||||||||||| |
|
|
| T |
29514747 |
aagtaaaaggttcaattatcataaagatcatcaaatgtattggagcaaaactctatacttggaaaagaaaagctcaaaaag-aacatctctcgagcaaag |
29514649 |
T |
 |
| Q |
187 |
atttcctcacacaataaacagggat-ggaaaatggtaaaagtcatttgcatgatagaaaatctaaagtctaggacagatataaaaaggctagagcaagga |
285 |
Q |
| |
|
|||| ||| ||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
29514648 |
atttactcgcacaataaacaaggataggaaaatggtaaaagtcatatgcatgatagaaaatctaaagtctaggacagatatcaagaggctagagcaagga |
29514549 |
T |
 |
| Q |
286 |
tctaagcaaaagaaaatcataatttaa------tcttcatcctcctcatcaccgtcaccaccggaagccttcttggctgcagcctttaagttctttcgct |
379 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
29514548 |
tctaagcaaaagaaaatcataatttaaatttaatcttcatcctcctcatcaccatcaccaccagaagccttcttggctgcagccttaaggttctttcgct |
29514449 |
T |
 |
| Q |
380 |
tcacacgatcaggaagaccaccgccgaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaaggatgggatgttcaccac |
479 |
Q |
| |
|
|||| ||| | ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
29514448 |
tcacgcgaccgggaagaccaccaccaaaaggacttgtgagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccatgaatgatgggatgttcacaac |
29514349 |
T |
 |
| Q |
480 |
ctgcctcccaaccct |
494 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
29514348 |
ctgcctcccaaccct |
29514334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 121 - 497
Target Start/End: Complemental strand, 43626417 - 43626038
Alignment:
| Q |
121 |
atgtattggagcaaaacttaatacttagaaaagaaaagatnnnnnnncaacatgtctc-gagcaaagatttcctcacacaataaacagggatgg--aaaa |
217 |
Q |
| |
|
||||||||||||||||||||||| || |||||||| |||| ||||| ||||| ||| ||||||||||| |||||||||||| ||||| |||| |
|
|
| T |
43626417 |
atgtattggagcaaaacttaatatttggaaaagaagagataaaaaa-caacacgtctctgagaaaagatttccttacacaataaacaaggatgagaaaaa |
43626319 |
T |
 |
| Q |
218 |
tggtaaaagtcatttgcatgatagaaaatctaaagtctaggacagatataaaaaggctagagcaaggatctaagcaaaagaaaatcataatttaatcttc |
317 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
43626318 |
tggtaaaagtcatatgcatcatagaaaatctaaagtctaggacagata--aaaaggctagagcaaggatctaagtaaaagaaaatcataatttaaccttc |
43626221 |
T |
 |
| Q |
318 |
atcctcctcatcaccgtcaccaccggaagccttcttggctgc-agcctttaagttctttcgcttcacacgatcaggaagaccaccgccgaaaggacttgt |
416 |
Q |
| |
|
||||||||| ||| | | |||||||||||||||||||||||| || ||| | ||||||||||||||||||| ||||||||| ||| || ||||||||||| |
|
|
| T |
43626220 |
atcctcctcgtcaacatgaccaccggaagccttcttggctgccagtcttaaggttctttcgcttcacacgaccaggaagacaaccaccaaaaggacttgt |
43626121 |
T |
 |
| Q |
417 |
gagtgaaaagtcaatgtgcttctgtgaatcaaccctca--ccatgaaggatgggatgttcaccacctgcctcccaaccctatg |
497 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||| ||||||||| |
|
|
| T |
43626120 |
gagtgaaaagtcaatgtgcttctgtgaatcaaccctcaccccatgaaggatgggatgttaacaacctgcctcctaaccctatg |
43626038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 43997926 - 43998065
Alignment:
| Q |
183 |
aaagatttcctcacacaataaacagggatgg-aaaatggtaaaagtcatttgcatgatagaaaatctaaagtctaggacagatataaaaaggctagagca |
281 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
43997926 |
aaagatttcctcacacaataaacaaggatgggaaaatggtaaaagtcatatgcatcatagaaaatctaaagtctaggacagcta--aaaaggctagagca |
43998023 |
T |
 |
| Q |
282 |
aggatctaagcaaaagaaaatcataatttaatcttcatcctc |
323 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
43998024 |
aggatctaagcaaaagaaaatcataatttaaccttcatcctc |
43998065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 117
Target Start/End: Complemental strand, 43632289 - 43632255
Alignment:
| Q |
83 |
catcaagtaaaaggttcaattatcacaaagatcat |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
43632289 |
catcaagtaaaaggttcaattatcacaaagatcat |
43632255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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