View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20339_high_10 (Length: 378)
Name: NF20339_high_10
Description: NF20339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20339_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 2 - 358
Target Start/End: Original strand, 37507741 - 37508097
Alignment:
| Q |
2 |
gacttatcaggtgattgagtgtaatggttctcgaaggccaaccaatttgaaagcttcttccgtgaacatgtcccaagcgattcacactgactagccatag |
101 |
Q |
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| T |
37507741 |
gacttatcaggtgattgagtgtaatggttctcgaaggccaaccaatttgaaagcttcttccgtgaacatgtcccaagcgattcacactgactagccatag |
37507840 |
T |
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| Q |
102 |
cgttatatgggagaggcgaagtggagacggatgttcctgccacatgacttgctacctccagtgcctacaagcagtggatgcaccgttgagcttgtatgct |
201 |
Q |
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| T |
37507841 |
cgttatatgggagaggcgaagtggagacggatgttcctgccacatgacttgctacctccagtgcctacaagcagtggatgcaccgttgagcttgtatgct |
37507940 |
T |
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| Q |
202 |
tttttaagttatactaattgttcctattgaattttatacttgtttgttttacacgtaaactatgtacttggtaatgatggtataatttgaaaatttgtat |
301 |
Q |
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| T |
37507941 |
tttttaagttatactaattgttcctattgaattttatactcgtttgttttacacgtaaactatgtacttggtaatgatggtataatttgaaaatttgtat |
37508040 |
T |
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| Q |
302 |
gcatcaacatcacaataatattatatgattcaaagattggatagacgaagcataatg |
358 |
Q |
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| T |
37508041 |
gcatcaacatcacaataatattatatgattcaaacattggatagacgaagcataatg |
37508097 |
T |
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