View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20339_low_29 (Length: 241)

Name: NF20339_low_29
Description: NF20339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20339_low_29
NF20339_low_29
[»] chr1 (41 HSPs)
chr1 (38-224)||(28030827-28031013)
chr1 (110-217)||(6766374-6766481)
chr1 (110-217)||(16120593-16120700)
chr1 (110-217)||(36757639-36757746)
chr1 (119-230)||(38153417-38153528)
chr1 (110-217)||(6402563-6402670)
chr1 (110-217)||(11641220-11641327)
chr1 (110-217)||(17305956-17306063)
chr1 (110-217)||(30003535-30003642)
chr1 (110-217)||(42735318-42735428)
chr1 (110-217)||(52024028-52024135)
chr1 (108-217)||(27292640-27292749)
chr1 (110-215)||(44644510-44644615)
chr1 (118-217)||(48526837-48526936)
chr1 (110-217)||(9342798-9342905)
chr1 (110-217)||(36399100-36399207)
chr1 (110-217)||(40771925-40772032)
chr1 (110-217)||(44647866-44647973)
chr1 (110-224)||(24321261-24321377)
chr1 (110-217)||(30701720-30701827)
chr1 (115-217)||(4302125-4302227)
chr1 (115-217)||(40977641-40977743)
chr1 (123-215)||(26910091-26910183)
chr1 (110-217)||(42788695-42788802)
chr1 (118-217)||(19711845-19711940)
chr1 (110-217)||(30385298-30385405)
chr1 (115-216)||(25695404-25695508)
chr1 (118-217)||(3485360-3485459)
chr1 (110-217)||(31444925-31445032)
chr1 (119-217)||(40800540-40800638)
chr1 (115-217)||(15382579-15382681)
chr1 (115-217)||(34634914-34635016)
chr1 (166-211)||(7568645-7568690)
chr1 (124-217)||(48375018-48375111)
chr1 (116-210)||(50972794-50972892)
chr1 (121-185)||(15912521-15912585)
chr1 (110-217)||(27984558-27984664)
chr1 (144-206)||(52163615-52163677)
chr1 (153-230)||(9881321-9881398)
chr1 (124-201)||(16689840-16689917)
chr1 (181-217)||(22575740-22575776)
[»] chr4 (51 HSPs)
chr4 (110-230)||(36523108-36523228)
chr4 (110-217)||(43967725-43967832)
chr4 (110-217)||(44232230-44232337)
chr4 (119-214)||(25101731-25101826)
chr4 (110-217)||(38416803-38416910)
chr4 (119-223)||(2571029-2571133)
chr4 (114-217)||(5428584-5428685)
chr4 (110-217)||(39307698-39307805)
chr4 (110-217)||(2760880-2760987)
chr4 (110-217)||(26169988-26170095)
chr4 (110-217)||(29830345-29830452)
chr4 (110-217)||(35381047-35381154)
chr4 (110-217)||(54330843-54330950)
chr4 (110-217)||(55209727-55209834)
chr4 (115-217)||(25296733-25296835)
chr4 (117-217)||(12625260-12625360)
chr4 (115-215)||(55800841-55800941)
chr4 (118-217)||(3036990-3037089)
chr4 (110-217)||(7614617-7614724)
chr4 (115-206)||(34652211-34652302)
chr4 (110-217)||(38721339-38721446)
chr4 (110-216)||(27407773-27407879)
chr4 (110-224)||(37767104-37767218)
chr4 (113-206)||(29051689-29051782)
chr4 (145-217)||(4467672-4467744)
chr4 (115-215)||(55191831-55191931)
chr4 (118-217)||(12240331-12240430)
chr4 (118-217)||(35686383-35686482)
chr4 (118-217)||(38716897-38716995)
chr4 (110-217)||(47386439-47386546)
chr4 (111-217)||(25918206-25918312)
chr4 (118-224)||(31010224-31010330)
chr4 (110-212)||(50205745-50205847)
chr4 (117-217)||(30446307-30446406)
chr4 (110-217)||(17610282-17610389)
chr4 (110-217)||(26125710-26125817)
chr4 (138-217)||(45291862-45291941)
chr4 (118-217)||(19433511-19433614)
chr4 (119-197)||(27755730-27755808)
chr4 (113-214)||(20875403-20875504)
chr4 (110-209)||(23360180-23360276)
chr4 (110-224)||(9029595-9029712)
chr4 (124-214)||(56297858-56297948)
chr4 (115-224)||(30191619-30191723)
chr4 (115-172)||(34323076-34323133)
chr4 (123-214)||(34316536-34316626)
chr4 (137-217)||(19595734-19595814)
chr4 (118-217)||(10550434-10550535)
chr4 (166-216)||(19903804-19903854)
chr4 (115-217)||(50620835-50620937)
chr4 (117-210)||(40682627-40682720)
[»] chr7 (49 HSPs)
chr7 (110-230)||(36341622-36341742)
chr7 (110-217)||(28061668-28061775)
chr7 (110-217)||(36623310-36623417)
chr7 (110-217)||(47156029-47156136)
chr7 (110-224)||(38851993-38852107)
chr7 (110-217)||(41897990-41898097)
chr7 (110-217)||(42890496-42890603)
chr7 (113-217)||(30342079-30342183)
chr7 (110-213)||(8683820-8683923)
chr7 (110-217)||(32431511-32431618)
chr7 (115-217)||(40256064-40256166)
chr7 (113-214)||(27045564-27045665)
chr7 (110-217)||(6766703-6766810)
chr7 (118-217)||(7438913-7439012)
chr7 (110-217)||(7457875-7457981)
chr7 (110-217)||(39130079-39130186)
chr7 (110-217)||(40090071-40090178)
chr7 (115-206)||(42662194-42662284)
chr7 (110-217)||(48602438-48602545)
chr7 (123-217)||(44732027-44732121)
chr7 (110-191)||(46322144-46322225)
chr7 (118-217)||(11502733-11502832)
chr7 (110-217)||(16778507-16778614)
chr7 (110-217)||(20885105-20885212)
chr7 (110-217)||(35117128-35117234)
chr7 (112-206)||(7169130-7169224)
chr7 (113-217)||(4131656-4131760)
chr7 (117-217)||(46479838-46479938)
chr7 (115-217)||(36585116-36585218)
chr7 (110-206)||(2952424-2952521)
chr7 (115-216)||(25566702-25566802)
chr7 (110-217)||(46103523-46103623)
chr7 (113-217)||(5529016-5529120)
chr7 (115-217)||(34750507-34750611)
chr7 (110-217)||(42877388-42877495)
chr7 (111-217)||(6174839-6174945)
chr7 (119-217)||(26161607-26161705)
chr7 (113-224)||(3851082-3851190)
chr7 (110-214)||(47525992-47526097)
chr7 (110-188)||(45331917-45331992)
chr7 (110-210)||(49110630-49110730)
chr7 (122-209)||(16870641-16870728)
chr7 (115-217)||(35570202-35570309)
chr7 (110-217)||(41134641-41134743)
chr7 (166-211)||(3785578-3785623)
chr7 (117-186)||(26980056-26980125)
chr7 (176-217)||(39278484-39278525)
chr7 (166-214)||(37467463-37467511)
chr7 (164-208)||(38767221-38767265)
[»] chr3 (40 HSPs)
chr3 (117-230)||(44561793-44561906)
chr3 (110-217)||(27334884-27334991)
chr3 (110-217)||(13499488-13499595)
chr3 (110-217)||(42490349-42490456)
chr3 (110-217)||(20765198-20765305)
chr3 (110-217)||(21005295-21005402)
chr3 (110-217)||(27010627-27010734)
chr3 (118-217)||(33415809-33415908)
chr3 (110-217)||(39866294-39866401)
chr3 (110-217)||(42761636-42761743)
chr3 (110-191)||(45613575-45613656)
chr3 (110-202)||(19823902-19823994)
chr3 (115-211)||(34912301-34912397)
chr3 (123-217)||(3430427-3430521)
chr3 (115-217)||(21797563-21797665)
chr3 (119-217)||(33803532-33803631)
chr3 (158-217)||(44856396-44856455)
chr3 (110-214)||(41252919-41253023)
chr3 (110-217)||(43181508-43181616)
chr3 (118-217)||(15332959-15333058)
chr3 (115-217)||(25527413-25527513)
chr3 (110-224)||(15568081-15568194)
chr3 (115-221)||(41751559-41751665)
chr3 (115-185)||(42049788-42049858)
chr3 (115-217)||(54507648-54507750)
chr3 (110-178)||(32220865-32220933)
chr3 (149-224)||(17643772-17643847)
chr3 (115-189)||(43467923-43467997)
chr3 (110-223)||(15664092-15664204)
chr3 (115-199)||(22782273-22782357)
chr3 (115-199)||(22786637-22786721)
chr3 (149-217)||(30213845-30213913)
chr3 (110-201)||(37766049-37766145)
chr3 (110-217)||(36227547-36227654)
chr3 (147-213)||(27813445-27813511)
chr3 (116-217)||(6910342-6910443)
chr3 (119-214)||(30057310-30057405)
chr3 (113-154)||(27813817-27813858)
chr3 (164-224)||(33128065-33128125)
chr3 (113-201)||(42469635-42469722)
[»] chr2 (33 HSPs)
chr2 (117-217)||(7799856-7799956)
chr2 (110-217)||(7608051-7608158)
chr2 (108-217)||(5404996-5405105)
chr2 (114-217)||(6223072-6223175)
chr2 (110-217)||(8042175-8042282)
chr2 (110-217)||(19141219-19141326)
chr2 (110-227)||(39358148-39358265)
chr2 (123-217)||(16865069-16865163)
chr2 (110-217)||(2183110-2183217)
chr2 (119-217)||(43444693-43444791)
chr2 (115-217)||(44365164-44365266)
chr2 (118-214)||(11931701-11931797)
chr2 (115-206)||(32774598-32774689)
chr2 (115-217)||(19262687-19262789)
chr2 (110-215)||(9006939-9007044)
chr2 (113-217)||(24251965-24252069)
chr2 (122-217)||(11841746-11841841)
chr2 (115-190)||(13598449-13598523)
chr2 (110-214)||(22839083-22839187)
chr2 (113-217)||(38291957-38292061)
chr2 (119-206)||(33607387-33607474)
chr2 (114-217)||(36072180-36072283)
chr2 (122-211)||(13117483-13117572)
chr2 (113-230)||(24093676-24093794)
chr2 (143-206)||(44644905-44644968)
chr2 (111-217)||(19165936-19166041)
chr2 (119-215)||(42133763-42133859)
chr2 (115-205)||(30548839-30548929)
chr2 (164-217)||(9172299-9172352)
chr2 (113-206)||(31904044-31904137)
chr2 (119-200)||(9553890-9553967)
chr2 (139-206)||(36177741-36177809)
chr2 (110-217)||(44563150-44563258)
[»] chr6 (38 HSPs)
chr6 (110-217)||(6563228-6563335)
chr6 (110-217)||(24624094-24624201)
chr6 (110-217)||(4147933-4148040)
chr6 (115-230)||(4440857-4440972)
chr6 (110-217)||(17257804-17257911)
chr6 (110-217)||(19088111-19088218)
chr6 (110-217)||(32414832-32414939)
chr6 (110-217)||(17213937-17214044)
chr6 (110-217)||(29790208-29790315)
chr6 (115-217)||(15383083-15383185)
chr6 (115-217)||(22054779-22054881)
chr6 (116-217)||(31569179-31569280)
chr6 (110-217)||(18668841-18668948)
chr6 (118-217)||(20226451-20226550)
chr6 (118-217)||(22120435-22120534)
chr6 (110-201)||(25475977-25476068)
chr6 (119-217)||(28477764-28477862)
chr6 (113-217)||(15337493-15337597)
chr6 (110-217)||(32671818-32671925)
chr6 (119-217)||(29693894-29693992)
chr6 (115-191)||(3989442-3989518)
chr6 (117-217)||(17155158-17155258)
chr6 (110-201)||(10520470-10520561)
chr6 (111-217)||(5495252-5495358)
chr6 (115-217)||(31869715-31869817)
chr6 (145-217)||(2360027-2360099)
chr6 (138-217)||(1040854-1040933)
chr6 (117-217)||(14214066-14214166)
chr6 (119-190)||(21540809-21540880)
chr6 (116-217)||(3623863-3623963)
chr6 (163-224)||(12226030-12226091)
chr6 (110-206)||(20437177-20437274)
chr6 (145-217)||(10298726-10298798)
chr6 (137-217)||(24955549-24955629)
chr6 (139-224)||(19240738-19240823)
chr6 (164-217)||(23158062-23158115)
chr6 (152-211)||(3321706-3321766)
chr6 (181-217)||(26567297-26567333)
[»] chr5 (32 HSPs)
chr5 (110-216)||(38916404-38916510)
chr5 (110-217)||(978079-978186)
chr5 (110-217)||(8086183-8086290)
chr5 (115-217)||(14634310-14634412)
chr5 (110-217)||(9502780-9502887)
chr5 (110-217)||(18094234-18094341)
chr5 (110-217)||(33387222-33387329)
chr5 (117-217)||(3472430-3472530)
chr5 (110-217)||(12007785-12007892)
chr5 (110-184)||(18598546-18598620)
chr5 (118-223)||(27579577-27579681)
chr5 (110-217)||(33587622-33587729)
chr5 (119-217)||(39776641-39776739)
chr5 (139-221)||(11251145-11251227)
chr5 (115-217)||(34111969-34112071)
chr5 (117-217)||(30355027-30355127)
chr5 (118-217)||(7224175-7224274)
chr5 (119-201)||(11785895-11785977)
chr5 (115-217)||(32017220-32017322)
chr5 (124-217)||(12456793-12456886)
chr5 (110-214)||(24992294-24992398)
chr5 (110-217)||(40156200-40156307)
chr5 (139-217)||(6996012-6996089)
chr5 (165-214)||(26387035-26387084)
chr5 (110-174)||(10696792-10696856)
chr5 (111-206)||(5947715-5947810)
chr5 (110-214)||(24916402-24916508)
chr5 (154-217)||(3422363-3422429)
chr5 (118-217)||(20692544-20692641)
chr5 (110-172)||(9050763-9050825)
chr5 (127-217)||(18998706-18998796)
chr5 (164-210)||(31197850-31197896)
[»] chr8 (31 HSPs)
chr8 (110-217)||(616785-616892)
chr8 (110-217)||(623178-623285)
chr8 (115-217)||(2766201-2766303)
chr8 (110-217)||(18044427-18044534)
chr8 (110-217)||(42587401-42587508)
chr8 (115-217)||(3100648-3100750)
chr8 (104-217)||(36642011-36642125)
chr8 (115-217)||(40494391-40494493)
chr8 (119-215)||(13216876-13216972)
chr8 (110-206)||(24524102-24524198)
chr8 (110-200)||(6414135-6414225)
chr8 (115-217)||(14237287-14237389)
chr8 (115-217)||(32998457-32998559)
chr8 (110-223)||(5878319-5878431)
chr8 (113-217)||(38957175-38957279)
chr8 (111-211)||(22489433-22489533)
chr8 (113-201)||(35403521-35403609)
chr8 (110-214)||(36167078-36167182)
chr8 (119-217)||(41263821-41263919)
chr8 (123-224)||(3370402-3370503)
chr8 (117-214)||(18090338-18090434)
chr8 (110-217)||(132019-132126)
chr8 (115-217)||(4270245-4270347)
chr8 (110-191)||(8394348-8394429)
chr8 (110-211)||(33700232-33700334)
chr8 (119-217)||(18035111-18035209)
chr8 (116-217)||(5173259-5173360)
chr8 (154-217)||(32780081-32780144)
chr8 (110-172)||(13217219-13217281)
chr8 (137-217)||(11637811-11637891)
chr8 (108-172)||(38497083-38497147)
[»] scaffold0295 (2 HSPs)
scaffold0295 (110-217)||(13870-13977)
scaffold0295 (110-169)||(9374-9433)
[»] scaffold0022 (1 HSPs)
scaffold0022 (110-217)||(100800-100907)
[»] scaffold0003 (1 HSPs)
scaffold0003 (110-217)||(161990-162097)
[»] scaffold0225 (1 HSPs)
scaffold0225 (113-217)||(8986-9090)
[»] scaffold0029 (1 HSPs)
scaffold0029 (113-217)||(138183-138287)
[»] scaffold0018 (1 HSPs)
scaffold0018 (117-217)||(67922-68022)
[»] scaffold0262 (1 HSPs)
scaffold0262 (113-217)||(22785-22889)
[»] scaffold0595 (1 HSPs)
scaffold0595 (124-217)||(3964-4057)
[»] scaffold0056 (1 HSPs)
scaffold0056 (110-214)||(70963-71066)
[»] scaffold0009 (1 HSPs)
scaffold0009 (115-214)||(217031-217131)


Alignment Details
Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 38 - 224
Target Start/End: Complemental strand, 28031013 - 28030827
Alignment:
Q  38 ctaatttgcatgcagatctttgtcctggtagctatcatcatattctcggccatcgataccaagaaaaagctgctccatccgtttcaaaatacatgttgca 137  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||| |||||||| |||||||||||||||||||||    
T  28031013 ctaatttgcatgcagatctttgtcctggtagctatcatcatattctcggccaccgataataagaaaaagttgctccatacgtttcaaaatacatgttgca 28030914  T
Q  138 tttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatatt 224  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  28030913 tttttgcaatgtgcattatttacatgacttattttgaccatactttttaactaacatataaatacaaatgttagcatgtaagatatt 28030827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 6766374 - 6766481
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  6766374 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 6766473  T
Q  210 agcatgta 217  Q
    ||||||||    
T  6766474 agcatgta 6766481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 16120700 - 16120593
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  16120700 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 16120601  T
Q  210 agcatgta 217  Q
    ||||||||    
T  16120600 agcatgta 16120593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 36757746 - 36757639
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||| |||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  36757746 ctccatccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 36757647  T
Q  210 agcatgta 217  Q
    ||||||||    
T  36757646 agcatgta 36757639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 38153528 - 38153417
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtac 218  Q
    ||||||||||||||| ||||||||  |||||||| |||| |||||||||||| | || ||||||||||||||||||||||||| |||||||| ||||||     
T  38153528 tttcaaaatacatgtcgcatttttataatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgtaa 38153429  T
Q  219 gatattcttcga 230  Q
    ||| ||||||||    
T  38153428 gatgttcttcga 38153417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 6402670 - 6402563
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || ||||||| |||||| ||||||||||||||| ||||||||| |||| ||    
T  6402670 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatatt 6402571  T
Q  210 agcatgta 217  Q
    ||||||||    
T  6402570 agcatgta 6402563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 11641327 - 11641220
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| |||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  11641327 ctccctccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 11641228  T
Q  210 agcatgta 217  Q
    ||||||||    
T  11641227 agcatgta 11641220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 17305956 - 17306063
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| |||||||||||   |||||||||||||||| |||| || |||||||||||||||||||||||||| ||| ||||||||| |||| ||    
T  17305956 ctccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaatatt 17306055  T
Q  210 agcatgta 217  Q
    ||||||||    
T  17306056 agcatgta 17306063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 30003535 - 30003642
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||||||||||   ||||||| |||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  30003535 ctccatccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 30003634  T
Q  210 agcatgta 217  Q
    ||||||||    
T  30003635 agcatgta 30003642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 42735428 - 42735318
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatac---tttttaactaacatataaatataaat 206  Q
    |||||||||||||||||||||||||  ||| |||||||||||| |||| || |||||||||||||| ||||   ||||||||||| ||||||||| ||||    
T  42735428 ctccatccgtttcaaaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatacaaat 42735329  T
Q  207 gttagcatgta 217  Q
     ||||||||||    
T  42735328 attagcatgta 42735318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 52024028 - 52024135
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || | |||||||||||| ||| |||||||||||  ||||||||||||| ||    
T  52024028 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaatatt 52024127  T
Q  210 agcatgta 217  Q
    ||| ||||    
T  52024128 agcgtgta 52024135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 27292640 - 27292749
Alignment:
Q  108 tgctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatg 207  Q
    |||||| |||||||||||||| ||||   ||||||||||| |||| |||| || ||| ||||||||||||||||||||||||||  |||||||| ||||     
T  27292640 tgctccctccgtttcaaaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaaata 27292739  T
Q  208 ttagcatgta 217  Q
    ||||||||||    
T  27292740 ttagcatgta 27292749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 44644615 - 44644510
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| ||| ||||||||||| |||||||| ||||||| |||||| ||||||||||||||||  ||| |||||||| || ||||||||| |||||||    
T  44644615 ctccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaatgtt 44644516  T
Q  210 agcatg 215  Q
    ||||||    
T  44644515 agcatg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 48526936 - 48526837
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaaca-tataaatataaatgttagcatgt 216  Q
    ||||||||||| || ||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||| ||| | |||||||||||||||||| ||||    
T  48526936 gtttcaaaatagatattgcatttttgcaatgtacattatttacatgatttactttgaccata-tttttaattaatattataaatataaatgttagtatgt 48526838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 9342905 - 9342798
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||| ||||||   ||||||||||||||| ||||| || |||||||||||||  ||| |||||||||||  |||||||| |||| ||    
T  9342905 ctccatccgtttcaaaaaacatgtctaatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaatatt 9342806  T
Q  210 agcatgta 217  Q
    ||||||||    
T  9342805 agcatgta 9342798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 36399100 - 36399207
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| || | |||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  36399100 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatatt 36399199  T
Q  210 agcatgta 217  Q
    ||| ||||    
T  36399200 agcgtgta 36399207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 40772032 - 40771925
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || ||| |||||||||| |||||||||||||||  |||||||| |||| ||    
T  40772032 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatatt 40771933  T
Q  210 agcatgta 217  Q
    ||||||||    
T  40771932 agcatgta 40771925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 44647973 - 44647866
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| ||| ||||||||||| |||||||| ||||||| |||||| |||||||||| |||||  ||| |||||||| || ||||||||| |||||||    
T  44647973 ctccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatgtt 44647874  T
Q  210 agcatgta 217  Q
    ||||||||    
T  44647873 agcatgta 44647866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 24321261 - 24321377
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgac--tatactttttaactaacatataaatataaatg 207  Q
    |||| ||||||| ||||||||||| | |||||||||||||||| |||| || ||| ||||||||||  |||| |||||||||||  |||||||| ||||     
T  24321261 ctccctccgttttaaaatacatgtcgaatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaatacaaata 24321360  T
Q  208 ttagcatgtacgatatt 224  Q
    |||||||||| ||||||    
T  24321361 ttagcatgtaagatatt 24321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 30701720 - 30701827
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   ||||||| |||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  30701720 ctccctccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatatt 30701819  T
Q  210 agcatgta 217  Q
    ||| ||||    
T  30701820 agcgtgta 30701827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 4302125 - 4302227
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||| | ||||||||||  ||||||||||||| || ||||||| |||||||||||||  ||  |||||||||||  ||||||||||||| |||||||    
T  4302125 tccgttttataatacatgttcaatttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaatattagcat 4302224  T
Q  215 gta 217  Q
    |||    
T  4302225 gta 4302227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 40977743 - 40977641
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||| ||||||||||||   |||||||||||||| | |||| || ||||| |||||||| |||||||||||||||  |||||||| |||| |||||||    
T  40977743 tccgttgcaaaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagcat 40977644  T
Q  215 gta 217  Q
    |||    
T  40977643 gta 40977641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 26910091 - 26910183
Alignment:
Q  123 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 215  Q
    |||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||| ||||    
T  26910091 aaaatacatgtataatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatg 26910183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 42788802 - 42788695
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| |||||||||| ||||   ||||||| |||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  42788802 ctccctccatttcaaaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 42788703  T
Q  210 agcatgta 217  Q
     |||||||    
T  42788702 tgcatgta 42788695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 19711940 - 19711845
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||||| | |||||||||||| ||||| ||||||| ||||||    | |||||| ||||||||||||||||||||| || || |||||||||    
T  19711940 gtttcaaaatacatatcgcatttttgcaacgtgcactatttacgtgactt----taactatattttttaactaacatataaatacaagtgatagcatgta 19711845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 30385405 - 30385298
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||  ||| ||||||||||| ||| ||||  |||||||| |||| ||||   |||||||||| ||| ||||||||||| ||||||||| |||||||    
T  30385405 ctccatctattttaaaatacatgtcgcaattttataatgtgcactattcacatagtttactttgaccatattttttaactaatatataaatacaaatgtt 30385306  T
Q  210 agcatgta 217  Q
    || |||||    
T  30385305 agtatgta 30385298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 25695404 - 25695508
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata---ctttttaactaacatataaatataaatgttag 211  Q
    |||||||||||||| || |  |||||||||||||||||||| | | || |||| | ||||| |||    ||||||||||| |||||||||||||||||||    
T  25695404 tccgtttcaaaataaatttcacatttttgcaatgtgcattaatcatatcacttgcgttgaccatatttttttttaactaatatataaatataaatgttag 25695503  T
Q  212 catgt 216  Q
    |||||    
T  25695504 catgt 25695508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 3485459 - 3485360
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||| ||||||||||| | | |||| |||| |||| ||||  ||| |||||||||||  ||| ||||||||||| ||||||||| |||||||| ||||||    
T  3485459 gttttaaaatacatgtcgtaattttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgta 3485360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 31444925 - 31445032
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||| |||||| |||||||||||  || |||| || |||||||||||| |||  | ||| ||||| ||| ||||||||||| ||||||| | |||||||    
T  31444925 ctccaaccgttttaaaatacatgtcacaattttacactgtgcattatttgcatagcgtaccttgaccatattttttaactaatatataaacacaaatgtt 31445024  T
Q  210 agcatgta 217  Q
     |||||||    
T  31445025 tgcatgta 31445032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 40800638 - 40800540
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-ctttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||| |||| | | |||| |||||||||||| | |||| |||||||||||| |||  ||||||||||| |||| |||| |||||||||||||||    
T  40800638 tttcaaaatatatgtcgtaattttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatat-aatacaaatgttagcatgta 40800540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 15382681 - 15382579
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||||||||||||||| ||| |||| |||||| || |||| |||| ||||||| |||| |   ||||||| ||| ||||||||| |||| |||| ||    
T  15382681 tccgtttcaaaatacatgtcgcaattttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatattagtat 15382582  T
Q  215 gta 217  Q
    |||    
T  15382581 gta 15382579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 34634914 - 34635016
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||| ||||| |||| |||  ||||||||||| | | || |||| ||||| |||||  ||| ||||||||||| ||||||||| |||||||| |||    
T  34634914 tccgtttctaaataaatgtcgcaactttgcaatgtgaagttttcacataacttattttgataatattttttaactaatatataaatacaaatgttaacat 34635013  T
Q  215 gta 217  Q
    |||    
T  34635014 gta 34635016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 7568690 - 7568645
Alignment:
Q  166 ttactttgactatactttttaactaacatataaatataaatgttag 211  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7568690 ttactttaactctactttttaactaatatataaatataaatgttag 7568645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 48375018 - 48375111
Alignment:
Q  124 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||| |||||  ||||||||||||| ||||||| || | ||||| |||||  ||| |||||||||||  |||||||| |||| ||||||||||    
T  48375018 aaatatatgttcaatttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgta 48375111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 50972892 - 50972794
Alignment:
Q  116 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttaca----tgacttactttgactatactttttaactaacatataaatataaatgtta 210  Q
    |||||||||| |||||||  |||||||||||| |||| || | |||    |||||||||||||  ||||||||||| ||| ||||||||| ||||||||    
T  50972892 ccgtttcaaattacatgtcacatttttgcaatttgcactaatcacatgactgacttactttgaacatactttttaaataatatataaatacaaatgtta 50972794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 15912585 - 15912521
Alignment:
Q  121 tcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttt 185  Q
    |||||||||||||   |||||| ||||||||| |||| || |||||||||||||| |||||||||    
T  15912585 tcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttt 15912521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 27984558 - 27984664
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||||||| |||||||||||  || |||| |||  |||| |||| ||||  ||||||||||| ||| ||||||||||| |||  |||| |||||||    
T  27984558 ctccatccgttttaaaatacatgtcacaattttacaacatgcactattcacattgcttactttgaccata-tttttaactaatatacgaatacaaatgtt 27984656  T
Q  210 agcatgta 217  Q
    ||| ||||    
T  27984657 agcttgta 27984664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 52163677 - 52163615
Alignment:
Q  144 caatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    ||||||||||| || ||||||| ||||||||  ||| ||||| ||||| ||||||||||||||    
T  52163677 caatgtgcattgttgacatgacatactttgatcatatttttttactaatatataaatataaat 52163615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 9881321 - 9881398
Alignment:
Q  153 ttatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatattcttcga 230  Q
    ||||| |||| ||||| ||| || ||| ||||||||||| ||||| |||||||||||| |||||| ||| || |||||    
T  9881321 ttattcacataacttattttaaccataatttttaactaatatatacatataaatgttatcatgtaagatgttgttcga 9881398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 16689840 - 16689917
Alignment:
Q  124 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 201  Q
    |||||||||| ||| |||| | ||||||| |||| |||| |||||||||||  ||| ||| ||||||| |||||||||    
T  16689840 aaatacatgtagcaattttacgatgtgcactattcacataacttactttgatcatattttctaactaatatataaata 16689917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 22575776 - 22575740
Alignment:
Q  181 tttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  22575776 tttttaactaatatataaatacaaatgttagcatgta 22575740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 36523228 - 36523108
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  36523228 ctccatccgtttcaaaatatatgtcgcatttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatgtt 36523129  T
Q  210 agcatgtacgatattcttcga 230  Q
    | |||||| ||| || |||||    
T  36523128 aacatgtaagatgttgttcga 36523108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 43967725 - 43967832
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  43967725 ctccttccgtttcaaaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaatatt 43967824  T
Q  210 agcatgta 217  Q
    ||||||||    
T  43967825 agcatgta 43967832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 44232337 - 44232230
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  44232337 ctccatccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 44232238  T
Q  210 agcatgta 217  Q
    ||||||||    
T  44232237 agcatgta 44232230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 25101731 - 25101826
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| ||| |||||| ||||||||||||||||||||||||  |||| |||||||    
T  25101731 tttcaaaatacatgttgcatttttgcaatgtgtattatttatatgatttattttgaccatactttttaactaacatataaattcaaatattagcat 25101826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 38416910 - 38416803
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  38416910 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 38416811  T
Q  210 agcatgta 217  Q
    ||||||||    
T  38416810 agcatgta 38416803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 2571133 - 2571029
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtac 218  Q
    |||||||||||||||  |||||||  ||||||||||||| |||||| ||| |||||||||| ||||||||||| ||||||||| |||||||||||||||     
T  2571133 tttcaaaatacatgtcacatttttataatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaa 2571034  T
Q  219 gatat 223  Q
    |||||    
T  2571033 gatat 2571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 5428584 - 5428685
Alignment:
Q  114 atccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagca 213  Q
    |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||| ||||| ||||||||||||||||  ||||||||||||| || ||    
T  5428584 atccgtttcaaaatacatgtcgcattttggcaatgtgcactattcacatgacttacgttgaccatactttttaactaac--ataaatataaatgctatca 5428681  T
Q  214 tgta 217  Q
    ||||    
T  5428682 tgta 5428685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 39307698 - 39307805
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||||||||||||||||||| ||||||||||||| | |  |||| ||||||||||||||||   |||||||||||||| ||||||||| |||||||    
T  39307698 ctccatccgtttcaaaatacatgtcgcatttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatgtt 39307797  T
Q  210 agcatgta 217  Q
    || |||||    
T  39307798 agtatgta 39307805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 2760987 - 2760880
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||| ||||||||||| ||||||||| |||| ||    
T  2760987 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatatt 2760888  T
Q  210 agcatgta 217  Q
    ||||||||    
T  2760887 agcatgta 2760880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 26169988 - 26170095
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || ||| |||||||||| |||||||||||||||  |||||||| |||| ||    
T  26169988 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatatt 26170087  T
Q  210 agcatgta 217  Q
    ||||||||    
T  26170088 agcatgta 26170095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 29830345 - 29830452
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   ||||||  |||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  29830345 ctccctccgtttcaaaatacatgtccaatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 29830444  T
Q  210 agcatgta 217  Q
    ||||||||    
T  29830445 agcatgta 29830452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 35381154 - 35381047
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| |  |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  35381154 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatatt 35381055  T
Q  210 agcatgta 217  Q
    ||||||||    
T  35381054 agcatgta 35381047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 54330950 - 54330843
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||| ||||||||||   |||||||||||||||  |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  54330950 ctccctccgtttcgaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 54330851  T
Q  210 agcatgta 217  Q
    ||||||||    
T  54330850 agcatgta 54330843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 55209834 - 55209727
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || ||| |||||||||| ||||||||||||||| ||||||||| |||| ||    
T  55209834 ctccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaatatt 55209735  T
Q  210 agcatgta 217  Q
    ||||||||    
T  55209734 agcatgta 55209727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 25296835 - 25296733
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||||||||||||| |   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  25296835 tccgtttcaaaatacatatctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 25296736  T
Q  215 gta 217  Q
    |||    
T  25296735 gta 25296733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 12625260 - 12625360
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    ||||||||||||||||||  ||||||||||| |||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| |||||||||    
T  12625260 cgtttcaaaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 12625359  T
Q  217 a 217  Q
    |    
T  12625360 a 12625360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 55800841 - 55800941
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||| |||||| ||  |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  55800841 tccgtttcaatatacatcttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 55800940  T
Q  215 g 215  Q
    |    
T  55800941 g 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 3036990 - 3037089
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||||||| | | || | ||||||| | |||| ||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  3036990 gtttcaaaatacatgtcgtaattatacaatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattagcatgta 3037089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 7614617 - 7614724
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||||||||||||||||||| | | |||| |||| |  |||| | |||||||||| |||||| ||| ||||||||||| ||||||||| |||||||    
T  7614617 ctccatccgtttcaaaatacatgtcgtaattttacaatatatattaatcacatgacttattttgaccatattttttaactaatatataaatacaaatgtt 7614716  T
Q  210 agcatgta 217  Q
    ||||||||    
T  7614717 agcatgta 7614724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 206
Target Start/End: Complemental strand, 34652302 - 34652211
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    |||||||||||||||||||  |||||||| |||||| | |||||||| ||||||||| ||| ||| ||||||||||||||||||||| ||||    
T  34652302 tccgtttcaaaatacatgtcacatttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaat 34652211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 38721339 - 38721446
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| ||| ||||||||||| |||||||| ||||||| |||||| |||||||||| |||||  ||| |||||||| || ||||||||| |||||||    
T  38721339 ctccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatgtt 38721438  T
Q  210 agcatgta 217  Q
    ||||||||    
T  38721439 agcatgta 38721446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 27407879 - 27407773
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| ||||||||||||||  ||||||||||| |||| | |||| |||| ||||||||||||  |||||||||||||| ||||||||| |||| ||    
T  27407879 ctccctccatttcaaaatacatgacgcatttttgcagtgtgaactattcacataacttactttgaccctactttttaactaatatataaatacaaatatt 27407780  T
Q  210 agcatgt 216  Q
    |||||||    
T  27407779 agcatgt 27407773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 37767218 - 37767104
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| |||||  |||| ||| ||||| ||| |||| ||||||| |||||||||||||||||||||||||||  | ||||||||| |||||||    
T  37767218 ctccctccgttttaaaatgaatgtcgcaattttgaaatatgcactatttacgtgacttactttgactatactttttaacgtatatataaatacaaatgtt 37767119  T
Q  210 agcatgtacgatatt 224  Q
    || ||||| ||||||    
T  37767118 agaatgtaagatatt 37767104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 113 - 206
Target Start/End: Original strand, 29051689 - 29051782
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    ||||||||| ||||||||||||||| |||| |||| | ||||||| |||| |||||||||||| ||| ||||||||||| ||||||||| ||||    
T  29051689 catccgttttaaaatacatgttgcaattttacaatatacattattcacataacttactttgaccatattttttaactaatatataaatacaaat 29051782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 4467744 - 4467672
Alignment:
Q  145 aatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||  |||||||| |||| ||||||||||    
T  4467744 aatgtgcattatttacttgacttgctttgactatactttttaactaatgtataaatacaaatattagcatgta 4467672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 55191831 - 55191931
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||| |||||  |||||||||||||||| |||| |  |||||||||||||||||||||||||| |||  | |||||| |||| |||||||    
T  55191831 tccgtttcaaaatatatgttcaatttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatattagcat 55191930  T
Q  215 g 215  Q
    |    
T  55191931 g 55191931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 12240430 - 12240331
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||||   |||||| ||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  12240430 gtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 12240331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 35686383 - 35686482
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||||   |||||||||||||||| |||| || | |||||||||||| |||||||||||||||  |||||||| |||| ||| ||||||    
T  35686383 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaatattatcatgta 35686482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 38716897 - 38716995
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||||   |||||||||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  38716897 gtttcaaaatacatgtccaatttttgcaatgtgcactattaat-tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 38716995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 47386546 - 47386439
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||    |||||| |||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  47386546 ctccctccgtttcaaaatacatgtccactttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 47386447  T
Q  210 agcatgta 217  Q
    ||||||||    
T  47386446 agcatgta 47386439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 25918206 - 25918312
Alignment:
Q  111 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 210  Q
    ||||||||||| |||||||||||   |||||||||||||||| |||| || ||| ||| ||||||  ||||||||||| ||  ||||||||||||| |||    
T  25918206 tccatccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatatta 25918305  T
Q  211 gcatgta 217  Q
    |||||||    
T  25918306 gcatgta 25918312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 31010224 - 31010330
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||||| |   ||||||| |||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  31010224 gtttcaaaatacatatccaatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaatattagcatgta 31010323  T
Q  218 cgatatt 224  Q
     ||||||    
T  31010324 agatatt 31010330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 50205745 - 50205847
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||| |||||||||||||||||    |||||| |||||||| |||| |  |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  50205745 ctccattcgtttcaaaatacatgtcaagtttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatatt 50205844  T
Q  210 agc 212  Q
    |||    
T  50205845 agc 50205847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 30446307 - 30446406
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    ||||||||||| ||||| |||| |||| ||| ||||||||| |||||||||||||||||  || ||||| ||||| ||||||||| |||||||||| |||    
T  30446307 cgtttcaaaatgcatgtcgcatgtttgtaatctgcattattcacatgacttactttgacccta-tttttgactaatatataaatacaaatgttagcctgt 30446405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 17610282 - 17610389
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| |||||||||||   ||||||||||| |||| |||| || |||||||||||||| ||| |||||| ||||  |||||||| |||| ||    
T  17610282 ctccctccgttttaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaatatt 17610381  T
Q  210 agcatgta 217  Q
    ||||||||    
T  17610382 agcatgta 17610389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 26125710 - 26125817
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||| |  ||  |||||| |||| ||||||||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  26125710 ctccctccgtttcaaaatataaattcaatttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 26125809  T
Q  210 agcatgta 217  Q
    ||||||||    
T  26125810 agcatgta 26125817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 45291862 - 45291941
Alignment:
Q  138 tttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||| ||||||||| |||| || |||||||||||||  ||||||||||||||| ||||||||| |||| ||||||||||    
T  45291862 tttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgta 45291941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 19433614 - 19433511
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgac----tatactttttaactaacatataaatataaatgttagca 213  Q
    |||||||||||||||||  |||||||||||||||| | || || ||||||||||||||    |||||||||||||||   |||||||| |||| ||||||    
T  19433614 gtttcaaaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaatacaaatattagca 19433515  T
Q  214 tgta 217  Q
    ||||    
T  19433514 tgta 19433511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 27755730 - 27755808
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatata 197  Q
    ||||||||||||||| ||||||||| ||||| |||| || | || ||||| |||||| |||||||||||||||||||||    
T  27755730 tttcaaaatacatgtcgcatttttgtaatgtacattgttcatataacttattttgaccatactttttaactaacatata 27755808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 20875504 - 20875403
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    |||| |||||||||||||||||| | ||||  |||||||| |||| | || | |||||||||| ||| ||||||||||| |||||||| |||||||| ||    
T  20875504 catctgtttcaaaatacatgttgtaattttaaaatgtgcactattcatataatttactttgaccatattttttaactaatatataaatgtaaatgtttgc 20875405  T
Q  213 at 214  Q
    ||    
T  20875404 at 20875403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 23360180 - 23360276
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||| | ||||||||||||||| ||||||||||||| |||| ||||  ||||||||||||||||  || ||||||||||| |||| |||| |||||||    
T  23360180 ctccattcatttcaaaatacatgtcgcatttttgcaatatgcactatt--catgacttactttgac-ctattttttaactaatatatgaatacaaatgtt 23360276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 9029712 - 9029595
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatt---tttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    |||||||||||| |||||||||||   |||   |||||||| || | ||||||| | |||||||||||| |||||||||||||||  |||||||| ||||    
T  9029712 ctccatccgttttaaaatacatgtccaattaattttgcaatctgtactatttacttaacttactttgaccatactttttaactaatgtataaatacaaat 9029613  T
Q  207 gttagcatgtacgatatt 224  Q
     |||||| ||| ||||||    
T  9029612 attagcacgtaagatatt 9029595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 56297948 - 56297858
Alignment:
Q  124 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||| | |||||| |||||| ||||||| |||| ||||  |||||| ||| || |||||||| ||||||||| ||||||||||||    
T  56297948 aaatacatgtcgtatttttacaatgtacattattcacataacttgttttgaccatatttattaactaatatataaatacaaatgttagcat 56297858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 30191723 - 30191619
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||||||||||||||||||| |||| ||||||||| |||| ||||  ||||||||     ||  |||| || || |||||||||||||||||| |||    
T  30191723 tccgtttcaaaatacatgttgcaattttacaatgtgcactattcacatagcttacttt-----tatgtttttacgaatatataaatataaatgttaacat 30191629  T
Q  215 gtacgatatt 224  Q
    ||| ||||||    
T  30191628 gtaagatatt 30191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 34323076 - 34323133
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttacttt 172  Q
    ||||||||||||||||||  ||||||||  ||||||||||||| ||||||||||||||    
T  34323076 tccgtttcaaaatacatgacgcatttttataatgtgcattattcacatgacttacttt 34323133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 34316536 - 34316626
Alignment:
Q  123 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||| |||| | |||||| || |||||| |||||| ||||||||||||||  ||| || |||||||| ||||||||| ||||||||||||    
T  34316536 aaaatatatgtcgtatttttacagtgtgcactatttatatgacttactttgatcata-ttgttaactaatatataaatacaaatgttagcat 34316626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 19595734 - 19595814
Alignment:
Q  137 atttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||| |||| |||| |||| || ||||||||||| || ||||| |||||||||  |||||||| |||| ||||||||||    
T  19595734 atttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgta 19595814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 10550434 - 10550535
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttt--taactaacatataaatataaatgttagcatg 215  Q
    |||| ||||||  ||||||| |||| |||| |||| |||| |||||  ||||||| || ||| ||||  ||||||| ||||||||| |||||||||||||    
T  10550434 gttttaaaatatctgttgcaattttacaatatgcactattcacatggtttactttaaccatattttttttaactaatatataaataaaaatgttagcatg 10550533  T
Q  216 ta 217  Q
    ||    
T  10550534 ta 10550535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 19903854 - 19903804
Alignment:
Q  166 ttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    |||||||||| |||  |||||||||| ||||||||| ||||||||||||||    
T  19903854 ttactttgaccatatattttaactaatatataaatacaaatgttagcatgt 19903804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 50620937 - 50620835
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||| |||||| ||||   ||||| ||||| |||| |||| || | |||||||||||| |||| ||||||||||  ||||||||  ||| |||||||    
T  50620937 tccgttttaaaatatatgtccaattttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcat 50620838  T
Q  215 gta 217  Q
    |||    
T  50620837 gta 50620835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 40682627 - 40682720
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 210  Q
    |||||||||||| |||  |||||||| ||||||||| | |||||| || ||| ||| || |||||||||||   | ||||||||| ||||||||    
T  40682627 cgtttcaaaatatatgccgcatttttacaatgtgcagtgtttacaagatttattttaaccatactttttaatcgatatataaatagaaatgtta 40682720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 110 - 230
Target Start/End: Original strand, 36341622 - 36341742
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||| ||||||||||||||||| |||||||||||||||||| |||| |||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  36341622 ctccattcgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatgtt 36341721  T
Q  210 agcatgtacgatattcttcga 230  Q
    || ||||| ||| || |||||    
T  36341722 agaatgtaagatgttgttcga 36341742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 28061775 - 28061668
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  28061775 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 28061676  T
Q  210 agcatgta 217  Q
    ||||||||    
T  28061675 agcatgta 28061668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 36623310 - 36623417
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  36623310 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 36623409  T
Q  210 agcatgta 217  Q
    ||||||||    
T  36623410 agcatgta 36623417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 47156029 - 47156136
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  47156029 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 47156128  T
Q  210 agcatgta 217  Q
    ||||||||    
T  47156129 agcatgta 47156136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 38852107 - 38851993
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  38852107 ctccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 38852008  T
Q  210 agcatgtacgatatt 224  Q
    |||||||| ||||||    
T  38852007 agcatgtaagatatt 38851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 41897990 - 41898097
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||  ||||||||||||||| ||||||||| |||| ||    
T  41897990 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatatt 41898089  T
Q  210 agcatgta 217  Q
    ||||||||    
T  41898090 agcatgta 41898097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 42890603 - 42890496
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| |  ||||||| |||||| ||||||||||||||| ||||||||| |||| ||    
T  42890603 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaatatt 42890504  T
Q  210 agcatgta 217  Q
    ||||||||    
T  42890503 agcatgta 42890496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 30342079 - 30342183
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    ||||||||| |||||||||| |  ||||||||||||||||||||| || ||| ||||||||||||||||||||||||||  |||||||| |||| ||||     
T  30342079 catccgttttaaaatacatgatcaatttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagt 30342178  T
Q  213 atgta 217  Q
    |||||    
T  30342179 atgta 30342183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 8683820 - 8683923
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||| ||||| |||||||||||   ||||||| ||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  8683820 ctccattcgttttaaaatacatgtccaatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 8683919  T
Q  210 agca 213  Q
    ||||    
T  8683920 agca 8683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 32431618 - 32431511
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  32431618 ctccctccgtttcaaaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 32431519  T
Q  210 agcatgta 217  Q
    || |||||    
T  32431518 agtatgta 32431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 40256064 - 40256166
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   |||||||||||||||  |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  40256064 tccgtttcaaaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 40256163  T
Q  215 gta 217  Q
    |||    
T  40256164 gta 40256166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 27045665 - 27045564
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    ||||||||||||||||||||||||| |||| ||||||  | |||| |||||  |||||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  27045665 catccgtttcaaaatacatgttgcaattttacaatgtatactattcacatggtttactttgaccatattttttaactaatatataaatacaaatgttagc 27045566  T
Q  213 at 214  Q
    ||    
T  27045565 at 27045564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 6766810 - 6766703
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||| ||| |||| |||| ||||||||| |||| ||||| |||||| ||| |||||||||||  |||||||  |||||||    
T  6766810 ctccctccgtttcaaaatacatgtcgcaattttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaatgtt 6766711  T
Q  210 agcatgta 217  Q
    ||||||||    
T  6766710 agcatgta 6766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 7438913 - 7439012
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||||   ||||||||||| ||||||||| || ||||||| |||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  7438913 gtttcaaaatacatgtctaatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgta 7439012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 7457981 - 7457875
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||||||||||   | |||||||||||||| |||| || | |||||||||||| |||||||||||||||  |||||||| |||| ||    
T  7457981 ctccatccgtttcaaaatacatgtctaagttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaatatt 7457883  T
Q  210 agcatgta 217  Q
    ||||||||    
T  7457882 agcatgta 7457875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 39130186 - 39130079
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||||||| ||||||||| ||  |||||||||||||||| |||| || |||||| ||||||| ||| |||||||||||  |||||||| |||| ||    
T  39130186 ctccatccgttttaaaatacatctttaatttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaatatt 39130087  T
Q  210 agcatgta 217  Q
    ||||||||    
T  39130086 agcatgta 39130079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 40090178 - 40090071
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| |||||| ||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  40090178 ctccctccgttttaaaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 40090079  T
Q  210 agcatgta 217  Q
    ||||||||    
T  40090078 agcatgta 40090071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 42662194 - 42662284
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    ||||||||||||||||||| ||| |||||||||||| |||||| ||||  ||||||||||| ||||||||||||||| ||||||||| ||||    
T  42662194 tccgtttcaaaatacatgtcgcaattttgcaatgtgtattattcacat-tcttactttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 48602438 - 48602545
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||    |||||| ||||||||| |||| |  |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  48602438 ctccctccgtttcaaaatacatgcccaatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatatt 48602537  T
Q  210 agcatgta 217  Q
    ||||||||    
T  48602538 agcatgta 48602545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 44732027 - 44732121
Alignment:
Q  123 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||  |||||||||||||||| |||| || |||||||||||||  |||||||||||||||  |||||||| |||| ||||||||||    
T  44732027 aaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgta 44732121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 46322225 - 46322144
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaa 191  Q
    |||| ||| |||||||||||||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  46322225 ctccctccatttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaa 46322144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 11502832 - 11502733
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||||   ||||||| ||||||||||||| || | |||||||||||  |||||||||||||||  |||||||| |||| ||||||||||    
T  11502832 gtttcaaaatacatgtccaatttttgtaatgtgcattattgacttaacttactttgatcatactttttaactaatgtataaatacaaatattagcatgta 11502733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 16778507 - 16778614
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   | |||||||||||||| |||| || || ||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  16778507 ctccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaatatt 16778606  T
Q  210 agcatgta 217  Q
    ||||||||    
T  16778607 agcatgta 16778614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 20885105 - 20885212
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||| ||||||| | |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  20885105 ctccctccgtttcaaaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 20885204  T
Q  210 agcatgta 217  Q
    ||||||||    
T  20885205 agcatgta 20885212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 35117128 - 35117234
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| ||||||| ||||  ||||||||||| |||| |||| || |||||||||||||| |||| ||||||||||  ||||||||||||| ||    
T  35117128 ctccctccgttttaaaatacctgttcaatttttgcaatatgcactattcacttgacttactttgaccatac-ttttaactaatgtataaatataaatatt 35117226  T
Q  210 agcatgta 217  Q
    ||||||||    
T  35117227 agcatgta 35117234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 7169130 - 7169224
Alignment:
Q  112 ccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    ||||||||||||||||||||||   | ||||||||||||   |||| |||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  7169130 ccatccgtttcaaaatacatgtcataattttgcaatgtgtcatattcacatgatttactttgactatattttttaactaatatataaatacaaat 7169224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 4131760 - 4131656
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    |||||||||||||||| |||| ||| |||| ||||||  | |||| |||| ||||||||| || ||| ||||||||||| ||||||||| ||| ||||||    
T  4131760 catccgtttcaaaatatatgtcgcaattttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaagttagc 4131661  T
Q  213 atgta 217  Q
    |||||    
T  4131660 atgta 4131656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 46479838 - 46479938
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    ||||||||||||||||||  |||||| ||||||||| ||||  | |||||||||||||| | | |||||||||||  |||||||| |||| |||||||||    
T  46479838 cgtttcaaaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgt 46479937  T
Q  217 a 217  Q
    |    
T  46479938 a 46479938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 36585116 - 36585218
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||||||||||||| |   |||||||||||||||| |||| || ||||||| ||| || |||||||| ||||||  |||||||| |||| |||||||    
T  36585116 tccgtttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaatattagcat 36585215  T
Q  215 gta 217  Q
    |||    
T  36585216 gta 36585218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 2952424 - 2952521
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-ctttttaactaacatataaatataaat 206  Q
    |||||||||||||||||||| ||||||| |||| ||| |||||||||| || |  ||||||||||| |||  |||||||||||  |||||||||||||    
T  2952424 ctccatccgtttcaaaatacgtgttgcaattttacaacgtgcattattcacgtagcttactttgaccatatttttttaactaatttataaatataaat 2952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 216
Target Start/End: Complemental strand, 25566802 - 25566702
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||| |||||||  ||| |||| |||| |||||||    
T  25566802 tccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaatattagcat 25566704  T
Q  215 gt 216  Q
    ||    
T  25566703 gt 25566702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 46103623 - 46103523
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |       |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  46103623 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcact-------tgacttactttgaccatactttttaactaatatataaatacaaatatt 46103531  T
Q  210 agcatgta 217  Q
    ||||||||    
T  46103530 agcatgta 46103523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 5529016 - 5529120
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    |||||||||||||||||||||   | |||| |||||| || ||||||| |   ||| |||||||||| ||||||||||| ||| ||||| ||||||||||    
T  5529016 catccgtttcaaaatacatgtcctaattttacaatgtacactatttacgtagattattttgactatattttttaactaatatacaaataaaaatgttagc 5529115  T
Q  213 atgta 217  Q
    |||||    
T  5529116 atgta 5529120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 34750507 - 34750611
Alignment:
Q  115 tccgtttcaaaa-tacatgttgcatttttgcaatgtgcattattt-acatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    |||||||||||| || ||||| ||||||||||  ||| | ||||| |||||||||||||||||  |||||||||||||| ||| ||||| |||||||| |    
T  34750507 tccgtttcaaaaataaatgttacatttttgcatcgtgaactatttcacatgacttactttgaccctactttttaactaatatacaaataaaaatgttaac 34750606  T
Q  213 atgta 217  Q
    |||||    
T  34750607 atgta 34750611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 42877388 - 42877495
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   | ||||| |||||||| |||| |  | |||||||||||| |||||||||||||||  |||||||| |||| ||    
T  42877388 ctccctccgtttcaaaatacatgtccaaattttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaatatt 42877487  T
Q  210 agcatgta 217  Q
    || |||||    
T  42877488 agaatgta 42877495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 6174839 - 6174945
Alignment:
Q  111 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 210  Q
    |||||||||||||||||| ||||   |||||||||| ||||| |||| |  ||||||||| |||| ||| |||||||||||  |||||||| |||  |||    
T  6174839 tccatccgtttcaaaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacatta 6174938  T
Q  211 gcatgta 217  Q
    |||||||    
T  6174939 gcatgta 6174945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 26161607 - 26161705
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||||||  ||||| |  |||| ||| |||| |||||| ||| |||||| || |||||||||||| ||||||||| |||| ||||||||||    
T  26161607 tttcaaaatacatgtcacatttgtataatgcgcactattcacatgatttattttgaccatgctttttaactaatatataaatacaaatattagcatgta 26161705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 3851082 - 3851190
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    ||||||| |||||||| ||||   ||||||||||||||||||    || |||||||||||||| |||||||||||||||  |||||||| |||| ||| |    
T  3851082 catccgtctcaaaatatatgtccaatttttgcaatgtgcattc---acttgacttactttgacaatactttttaactaatgtataaatacaaatattaac 3851178  T
Q  213 atgtacgatatt 224  Q
    | ||| ||||||    
T  3851179 acgtaagatatt 3851190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 47526097 - 47525992
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttt-aactaacatataaatataaatgt 208  Q
    |||||||||||| |||||| |||| ||| |||| || | |||||||||||| |  ||||||||||  ||| ||||| |||||| ||||||||| ||||||    
T  47526097 ctccatccgttttaaaatatatgtcgcaattttacattatgcattatttacctagcttactttgatcatatttttttaactaatatataaatacaaatgt 47525998  T
Q  209 tagcat 214  Q
    ||||||    
T  47525997 tagcat 47525992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 45331917 - 45331992
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaac 188  Q
    |||| |||||||||||| ||||||   ||||||||||| ||||||||| | ||||||||||||||| ||| ||||||||    
T  45331917 ctccctccgtttcaaaacacatgt---atttttgcaatatgcattattcatatgacttactttgaccatattttttaac 45331992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 49110730 - 49110630
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||||||| |||||||||||  || ||||  |||||| | |||| | |||| |||||||||| ||| ||||||||||| |||| |||| |||||||    
T  49110730 ctccatccgttttaaaatacatgtcacaattttataatgtgtactattcaaatgatttactttgaccatattttttaactaatatattaatacaaatgtt 49110631  T
Q  210 a 210  Q
    |    
T  49110630 a 49110630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 16870728 - 16870641
Alignment:
Q  122 caaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||||||| ||  |||| |||| |||| |||| | || |||||||||||| ||| || |||||||| |||||||||||||||||    
T  16870728 caaaatacatgtcgcggttttacaatatgcactattcaaataacttactttgaccatatttgttaactaatatataaatataaatgtt 16870641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 35570309 - 35570202
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-----ctttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||||| ||| |||| ||||||||| |||| |||  |||||||||||| |||      ||||||||||| ||| ||||| |||| ||    
T  35570309 tccgtttcaaaatacatgtcgcaattttacaatgtgcactattcacaaaacttactttgaccatatttttttttttaactaatatacaaatacaaatttt 35570210  T
Q  210 agcatgta 217  Q
    ||||||||    
T  35570209 agcatgta 35570202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 41134743 - 41134641
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||||||| ||||||||||||  |||||| ||||||| | |||| |  |||||||||||||| |||     |||||||  |||||||| |||| ||    
T  41134743 ctccatccgttttaaaatacatgttcaatttttacaatgtgtactattcatttgacttactttgaccata-----taactaatgtataaatacaaatatt 41134649  T
Q  210 agcatgta 217  Q
    ||||||||    
T  41134648 agcatgta 41134641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 3785578 - 3785623
Alignment:
Q  166 ttactttgactatactttttaactaacatataaatataaatgttag 211  Q
    |||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  3785578 ttactttgaccatattttttaactaatatataaatacaaatgttag 3785623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 26980056 - 26980125
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttta 186  Q
    |||||||||||| |||||||| ||||  ||| ||||||||| |||| ||||| |||||| ||| ||||||    
T  26980056 cgtttcaaaataaatgttgcaattttataatatgcattattcacataacttattttgaccatatttttta 26980125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 39278525 - 39278484
Alignment:
Q  176 tatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||| ||||||||||| ||||||||||||||||||| |||||    
T  39278525 tatattttttaactaatatataaatataaatgttagtatgta 39278484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 37467511 - 37467463
Alignment:
Q  166 ttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||| || ||| ||||||||||| ||||||||| ||||||||||||    
T  37467511 ttactttaaccatattttttaactaatatataaatacaaatgttagcat 37467463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 38767265 - 38767221
Alignment:
Q  164 acttactttgactatactttttaactaacatataaatataaatgt 208  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||||    
T  38767265 acttactttgaccatattttttaactaatatataaatacaaatgt 38767221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 230
Target Start/End: Original strand, 44561793 - 44561906
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||    
T  44561793 cgtttcaaaatacatgttgcatgtttgcaatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatgttgacatgt 44561892  T
Q  217 acgatattcttcga 230  Q
    | ||| || |||||    
T  44561893 aagatgttgttcga 44561906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 27334991 - 27334884
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  27334991 ctccttccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 27334892  T
Q  210 agcatgta 217  Q
    ||||||||    
T  27334891 agcatgta 27334884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 13499595 - 13499488
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  13499595 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 13499496  T
Q  210 agcatgta 217  Q
    ||||||||    
T  13499495 agcatgta 13499488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 42490456 - 42490349
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  42490456 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 42490357  T
Q  210 agcatgta 217  Q
    ||||||||    
T  42490356 agcatgta 42490349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 20765198 - 20765305
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| |||||||||||   |||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||| |||| ||    
T  20765198 ctccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatatt 20765297  T
Q  210 agcatgta 217  Q
    | ||||||    
T  20765298 aacatgta 20765305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 21005295 - 21005402
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||||  |||||||||| ||||| |||| || | |||||||||||| ||||||||||| ||| |||||||||||||| ||    
T  21005295 ctccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatataaatatt 21005394  T
Q  210 agcatgta 217  Q
    ||||||||    
T  21005395 agcatgta 21005402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 27010734 - 27010627
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| | ||||||||||||| ||||||||| |||| ||    
T  27010734 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatatt 27010635  T
Q  210 agcatgta 217  Q
    ||||||||    
T  27010634 agcatgta 27010627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 33415809 - 33415908
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||||   ||||||||||||||| |||||||  |||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  33415809 gtttcaaaatacatgtccaatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgta 33415908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 39866401 - 39866294
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| |||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  39866401 ctccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 39866302  T
Q  210 agcatgta 217  Q
    ||||||||    
T  39866301 agcatgta 39866294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 42761743 - 42761636
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  42761743 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 42761644  T
Q  210 agcatgta 217  Q
    ||||||||    
T  42761643 agcatgta 42761636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 45613575 - 45613656
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaa 191  Q
    |||||||||||||||||| |||||   |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  45613575 ctccatccgtttcaaaattcatgtccaatttttgcaatgtgcactatttacttgacttactttgactatactttttaactaa 45613656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 19823902 - 19823994
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatat 202  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||||    
T  19823902 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatat 19823994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 211
Target Start/End: Complemental strand, 34912397 - 34912301
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttag 211  Q
    |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||||    
T  34912397 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattag 34912301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 3430521 - 3430427
Alignment:
Q  123 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||| |||| ||||||||| |||||| || |||||||||||| ||| ||||||||||| |||| |||| |||| ||||||||||    
T  3430521 aaaatacatgttgcaattttacaatgtgcactatttatataacttactttgaccatattttttaactaatatattaataaaaatattagcatgta 3430427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 21797563 - 21797665
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   |||||||||||||||| |||| || ||| ||| |||||| |||||||||||||||  |||||||| |||| |||||||    
T  21797563 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaatattagcat 21797662  T
Q  215 gta 217  Q
    |||    
T  21797663 gta 21797665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 33803532 - 33803631
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatac-tttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||| |||||||||||  ||||||||||||| ||||| ||||    
T  33803532 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgta 33803631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 44856396 - 44856455
Alignment:
Q  158 tacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  44856396 tacatgacttactttaactatactttttaactaacatataaatacaaatgttagtatgta 44856455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 41253023 - 41252919
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||| ||||||||||| |||| ||| |||| ||||||||| |||| | ||  |||||||| || ||| ||||||||||| ||||||||| |||||||    
T  41253023 ctccatctgtttcaaaatatatgtcgcaattttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgtt 41252924  T
Q  210 agcat 214  Q
    |||||    
T  41252923 agcat 41252919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 43181616 - 43181508
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatac-tttttaactaacatataaatataaatgt 208  Q
    |||||||||||| ||||||||||||  ||||| | |||||||| |||| || ||| |||||||||| |||| |||||||||||  ||||||||||||| |    
T  43181616 ctccatccgtttaaaaatacatgtttaattttcgtaatgtgcactattcacttgatttactttgaccatacttttttaactaatgtataaatataaatat 43181517  T
Q  209 tagcatgta 217  Q
    ||| |||||    
T  43181516 tagtatgta 43181508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 15333058 - 15332959
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||| ||||||||||| ||| |||| ||||||||| |||| ||||  ||| ||||||| | | ||||||||||| ||||||||| |||||||||||||||    
T  15333058 gttttaaaatacatgtcgcaattttacaatgtgcactattcacatagcttgctttgaccaaattttttaactaatatataaatacaaatgttagcatgta 15332959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 25527413 - 25527513
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||| |||||||||| ||||||||||||||||   |||| ||||||||||||| ||| ||| ||||||||| | ||||||||| |||| ||| |||    
T  25527413 tccgtttcgaaatacatgtcgcatttttgcaatgtg--atattcacatgacttacttcgaccatattttttaactgatatataaatacaaatattaacat 25527510  T
Q  215 gta 217  Q
    |||    
T  25527511 gta 25527513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 15568194 - 15568081
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||| ||||||||||| |||| ||| |||| |||||||||||||||||||   ||| |||||  ||| ||||||||||| ||||||||| |||||||    
T  15568194 ctccatctgtttcaaaata-atgtcgcaattttacaatgtgcattatttacatagtttaatttgatcatattttttaactaatatataaatacaaatgtt 15568096  T
Q  210 agcatgtacgatatt 224  Q
    | | |||| ||||||    
T  15568095 accgtgtaagatatt 15568081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 221
Target Start/End: Complemental strand, 41751665 - 41751559
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||| ||||| ||||| || |||| |||| || | ||||||||| || ||||||||  ||| ||||||||||| ||||||||| ||||||||||||    
T  41751665 tccgtttcgaaatatatgttacaattttacaatatgtaatatttacataacatactttgatcatattttttaactaatatataaatacaaatgttagcat 41751566  T
Q  215 gtacgat 221  Q
     ||||||    
T  41751565 ttacgat 41751559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 185
Target Start/End: Original strand, 42049788 - 42049858
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttt 185  Q
    |||||| |||||||||||  ||||||||||||||||||  ||||||||||| ||||||||||||| |||||    
T  42049788 tccgttccaaaatacatgccgcatttttgcaatgtgcacaatttacatgacatactttgactatatttttt 42049858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 54507648 - 54507750
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||||||||||||| |   ||||||||||| |||| |||| || ||||||| ||||| ||||||||||||||||  |||||||| | || |||||||    
T  54507648 tccgtttcaaaatacatatccaatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagatattagcat 54507747  T
Q  215 gta 217  Q
    |||    
T  54507748 gta 54507750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 32220865 - 32220933
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactat 178  Q
    |||||||||||| ||||||||||||  |||||||||||||| | |||| || |||||||||||||||||    
T  32220865 ctccatccgttttaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgactat 32220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 17643772 - 17643847
Alignment:
Q  149 tgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatatt 224  Q
    ||||||||| |||| | ||||| |||||||| ||||||||||| || |||||| ||||||||||||||| ||||||    
T  17643772 tgcattattaacataatttactgtgactatattttttaactaatatgtaaatacaaatgttagcatgtaagatatt 17643847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 43467997 - 43467923
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaact 189  Q
    ||||||||||||||||||    |||||||||||||| | |||| || |||||||||||||| |||||||||||||    
T  43467997 tccgtttcaaaatacatgaccaatttttgcaatgtgtactattcacttgacttactttgaccatactttttaact 43467923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 15664204 - 15664092
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||| |||||||||||  ||| ||| |||| |||||||||||||||||||  |||| |||||  ||| ||||||| ||| ||||||||| |||||||    
T  15664204 ctccatcagtttcaaaatag-tgtcgcaattttacaatgtgcattatttacatagcttaatttgatcatattttttaattaatatataaatacaaatgtt 15664106  T
Q  210 agcatgtacgatat 223  Q
    |  ||||| |||||    
T  15664105 actatgtaagatat 15664092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 22782273 - 22782357
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaa 199  Q
    ||||||||||| ||||||| ||| ||||  |||||||| |||| ||||  |||||||||||| || ||||||||||| |||||||    
T  22782273 tccgtttcaaactacatgtcgcaattttttaatgtgcactattcacatagcttactttgactctattttttaactaaaatataaa 22782357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 22786637 - 22786721
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaa 199  Q
    ||||||||||| ||||||| ||| ||||  |||||||| |||| ||||  |||||||||||| || ||||||||||| |||||||    
T  22786637 tccgtttcaaactacatgtcgcaattttttaatgtgcactattcacatagcttactttgactctattttttaactaatatataaa 22786721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 30213845 - 30213913
Alignment:
Q  149 tgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||| |||| || ||||||| |||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  30213845 tgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgta 30213913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 37766049 - 37766145
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttac-----tttgactatactttttaactaacatataaata 201  Q
    |||||||| |||||||||||| ||  ||| ||||||||||||| |||| |||||| ||||     ||||||| ||||||||||||||||||| ||||    
T  37766049 ctccatccatttcaaaatacacgtctcatatttgcaatgtgcactattaacatgatttactataatttgactgtactttttaactaacatatgaata 37766145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 36227547 - 36227654
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| ||||| ||||||  |||||||||||| ||| |||| |  |||||||||||||| ||| |||| || |||  |||||||| |||| ||    
T  36227547 ctccctccgttttaaaatgcatgttcaatttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaatatt 36227646  T
Q  210 agcatgta 217  Q
    ||||||||    
T  36227647 agcatgta 36227654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 27813511 - 27813445
Alignment:
Q  147 tgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagca 213  Q
    |||||| |||| ||||  |||| |||||||||| ||||||||||| ||||||||| |||||||||||    
T  27813511 tgtgcactattcacatagcttattttgactatattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 6910342 - 6910443
Alignment:
Q  116 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 215  Q
    ||||||||||||||||||   | |||| |||||| || |||| || ||||||||||| || ||| |||||||||||  |||||||| |||| ||| ||||    
T  6910342 ccgtttcaaaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatg 6910441  T
Q  216 ta 217  Q
    ||    
T  6910442 ta 6910443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 30057310 - 30057405
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||||||||||| | |||||  ||| || ||||||| |||| || |||||| || ||| ||||||||||| |||||||   ||||||||||||    
T  30057310 tttcaaaatacatgtagtattttgacaacgttcattattcacataacatactttaaccatattttttaactaatatataaaagcaaatgttagcat 30057405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 27813858 - 27813817
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcatt 154  Q
    |||| |||||||||||||||||||| |||| |||||||||||    
T  27813858 catctgtttcaaaatacatgttgcaattttacaatgtgcatt 27813817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 33128125 - 33128065
Alignment:
Q  164 acttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatatt 224  Q
    ||||| |||||  ||||||||||||||| | |||||||||||| ||| |||||| ||||||    
T  33128125 acttattttgatcatactttttaactaatacataaatataaatattaacatgtaagatatt 33128065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 201
Target Start/End: Complemental strand, 42469722 - 42469635
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 201  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||| || ||||||| ||| ||  || ||||||| ||| || ||||||    
T  42469722 catccgttt-aaaatacatgtcgcattttttcaatgcgcattattcacgtgacttaatttaaccgtattttttaattaatatgtaaata 42469635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 7799856 - 7799956
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||  |||||||||||||| ||||||||| ||||||||||||||    
T  7799856 cgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatgttagcatgt 7799955  T
Q  217 a 217  Q
    |    
T  7799956 a 7799956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 7608051 - 7608158
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  7608051 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 7608150  T
Q  210 agcatgta 217  Q
    ||||||||    
T  7608151 agcatgta 7608158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 5404996 - 5405105
Alignment:
Q  108 tgctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatg 207  Q
    |||||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| ||||     
T  5404996 tgctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 5405095  T
Q  208 ttagcatgta 217  Q
    ||||||||||    
T  5405096 ttagcatgta 5405105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 6223072 - 6223175
Alignment:
Q  114 atccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagca 213  Q
    |||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||| ||||||||||| ||||||||| |||| ||||||    
T  6223072 atccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagca 6223171  T
Q  214 tgta 217  Q
    ||||    
T  6223172 tgta 6223175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 8042282 - 8042175
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  8042282 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 8042183  T
Q  210 agcatgta 217  Q
    ||||||||    
T  8042182 agcatgta 8042175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 19141326 - 19141219
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  19141326 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 19141227  T
Q  210 agcatgta 217  Q
    ||||||||    
T  19141226 agcatgta 19141219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 110 - 227
Target Start/End: Original strand, 39358148 - 39358265
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  39358148 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 39358247  T
Q  210 agcatgtacgatattctt 227  Q
    |||||||| ||| |||||    
T  39358248 agcatgtaagatgttctt 39358265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 123 - 217
Target Start/End: Original strand, 16865069 - 16865163
Alignment:
Q  123 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||| |||||||| |||| | || |||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  16865069 aaaatacatgtcgcatttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatgttagcatgta 16865163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 2183217 - 2183110
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  ||| |||| |||| ||    
T  2183217 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaatatt 2183118  T
Q  210 agcatgta 217  Q
    ||||||||    
T  2183117 agcatgta 2183110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 217
Target Start/End: Complemental strand, 43444791 - 43444693
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||| ||| |||| |||||||||||||| |||| | || ||||||| ||| ||||||||||| ||||||||| |||||||||||||||    
T  43444791 tttcaaaatacatgtcgcaattttacaatgtgcattattcacataattttctttgaccatattttttaactaatatataaatacaaatgttagcatgta 43444693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 44365164 - 44365266
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   ||||||||||| |||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  44365164 tccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 44365263  T
Q  215 gta 217  Q
    |||    
T  44365264 gta 44365266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 214
Target Start/End: Original strand, 11931701 - 11931797
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||| ||| |||| |||| ||||||||| | || |||||||||||| ||| ||||||||||| ||||||||| ||||||||||||    
T  11931701 gtttcaaaatacatgtcgcaattttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagcat 11931797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 206
Target Start/End: Original strand, 32774598 - 32774689
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    ||||||||||||||||||||  | ||||  |||||||| ||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||    
T  32774598 tccgtttcaaaatacatgttcaagttttataatgtgcactatttacttgacttactttgaccatactttttaactaatatatacatataaat 32774689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 19262687 - 19262789
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   |||||| ||||||||| ||||||  | |||||||||||| ||| ||||||||||| ||||||||| |||| |||||||    
T  19262687 tccgtttcaaaatacatgtccaattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaatattagcat 19262786  T
Q  215 gta 217  Q
    |||    
T  19262787 gta 19262789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 9007044 - 9006939
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||||||| ||||||||||||||| ||| |||| |||||||||||||| |  |  ||||||||||| ||| |||||||||||  |||||||| |||||||    
T  9007044 ctccatccatttcaaaatacatgtcgcaattttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaaatgtt 9006945  T
Q  210 agcatg 215  Q
    ||||||    
T  9006944 agcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 24251965 - 24252069
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    ||||||||||||||||||| |  || |||| |||| || |||||| |||| ||||| |||||| ||| ||||||||||| ||||||||| ||||||||||    
T  24251965 catccgtttcaaaatacatttcacaattttacaatatgtattattcacataacttattttgaccatattttttaactaatatataaatacaaatgttagc 24252064  T
Q  213 atgta 217  Q
    |||||    
T  24252065 atgta 24252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 11841841 - 11841746
Alignment:
Q  122 caaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||   |||||||||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  11841841 caaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 11841746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 13598449 - 13598523
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaacta 190  Q
    ||||||| |||||| ||||||||||||| ||||||||| |||| | ||||||||||||||| ||||||||||||||    
T  13598449 tccgttttaaaatatatgttgcattttt-caatgtgcactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 22839187 - 22839083
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| |||||||||| || || ||  ||||||||||||| |||| |||| |||||||||||| ||| ||||||||||  ||||||||  |||||||    
T  22839187 ctccttccatttcaaaatatattttacaaatttgcaatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaatgtt 22839088  T
Q  210 agcat 214  Q
    |||||    
T  22839087 agcat 22839083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 38291957 - 38292061
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    |||||||||| ||||||||  |||| |||| |||  ||||||||| | || |||||||||||| ||| ||||||||||  ||||||||| |||||||| |    
T  38291957 catccgtttccaaatacatagtgcaattttacaacatgcattattcagataacttactttgaccatattttttaactagtatataaatacaaatgttaac 38292056  T
Q  213 atgta 217  Q
    |||||    
T  38292057 atgta 38292061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 33607387 - 33607474
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    |||||||||||||||   |||||| ||||||||| |||| |  ||||||||||||| ||||||||||||||||  |||||||| ||||    
T  33607387 tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaat 33607474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 36072180 - 36072283
Alignment:
Q  114 atccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagca 213  Q
    |||| |||||||||||||||   |||||| |||| |||| |||| |  |||||||||||||  ||| |||||||||||  ||||||||||||| ||||||    
T  36072180 atccatttcaaaatacatgtccaatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaatattagca 36072279  T
Q  214 tgta 217  Q
    ||||    
T  36072280 tgta 36072283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 211
Target Start/End: Complemental strand, 13117572 - 13117483
Alignment:
Q  122 caaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttag 211  Q
    ||||||||||||| |||| || | ||||||| | |||| || |||||||||||| ||| ||||||||| | |||||||||||||| ||||    
T  13117572 caaaatacatgttacattcttaccatgtgcactgtttatataacttactttgaccatattttttaactgatatataaatataaatattag 13117483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 24093794 - 24093676
Alignment:
Q  113 catccgtttcaaaatacatgttgcattttt-gcaatgtgcattatttacatgacttactttgactatacttttt-aactaacatataaatataaatgtta 210  Q
    ||||| ||||||||||||||| | |||||| || ||||||  ||||   |||| |||||||||| ||||||||| ||||||||||| |||| ||||||||    
T  24093794 catccatttcaaaatacatgtcgtattttttgcgatgtgcgctattcgtatgatttactttgaccatacttttttaactaacatat-aatacaaatgtta 24093696  T
Q  211 gcatgtacgatattcttcga 230  Q
    ||||||| ||| || |||||    
T  24093695 gcatgtaagatgttgttcga 24093676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 44644905 - 44644968
Alignment:
Q  143 gcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    |||||||||| |||| |  || ||||||||||| ||||||||||||||| ||||||||||||||    
T  44644905 gcaatgtgcactattcaattgtcttactttgaccatactttttaactaatatataaatataaat 44644968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 19166041 - 19165936
Alignment:
Q  111 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 210  Q
    ||||||||||| |||||| |||| || ||||||||||||||| |||| |||||||||  |||||  ||  ||||||| ||| ||||||||| || |||||    
T  19166041 tccatccgttttaaaatatatgtcgcgtttttgcaatgtgca-tattcacatgacttgttttgatcatggtttttaattaatatataaatacaattgtta 19165943  T
Q  211 gcatgta 217  Q
     ||||||    
T  19165942 tcatgta 19165936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 42133763 - 42133859
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 215  Q
    ||||||||||||||| | | ||||  |||||||| |||| | ||   |||||||||  ||| ||||||||||| ||||||||| |||||||||||||    
T  42133763 tttcaaaatacatgtcgtaattttaaaatgtgcactattcatatagtttactttgatcatattttttaactaatatataaatacaaatgttagcatg 42133859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 30548839 - 30548929
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaa 205  Q
    ||||||||||| |||||||  || |||  |||| |||||||||||||  | |||| ||||| ||| |||||||| || |||||||||||||    
T  30548839 tccgtttcaaattacatgtcacaatttaacaatatgcattatttacacaaattacgttgaccatattttttaaccaatatataaatataaa 30548929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 9172352 - 9172299
Alignment:
Q  164 acttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||| ||| |||||||||||  |||||||| ||| |||||||||||    
T  9172352 acttactttgaccatattttttaactaatgtataaatacaaaagttagcatgta 9172299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 206
Target Start/End: Complemental strand, 31904137 - 31904044
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    ||||||||| ||||||||| | ||| ||||  | ||| || |||| ||||  |||||| |||| ||| ||||||||||| ||||||||||||||    
T  31904137 catccgttttaaaatacatatcgcaattttatactgtacactattcacatagcttactctgaccatattttttaactaatatataaatataaat 31904044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 9553967 - 9553890
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaat 200  Q
    ||||||||||||||| |||||||| |||||| ||||||    || ||||||||||||   | ||||||||||| ||||||||    
T  9553967 tttcaaaatacatgtcgcatttttacaatgtacattat----ataacttactttgaccgcattttttaactaatatataaat 9553890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 36177809 - 36177741
Alignment:
Q  139 ttttgcaatgtgcattatttacatgacttactttgactatacttttt-aactaacatataaatataaat 206  Q
    |||||||||| |||||||| |||||| ||| |||||| ||| ||||| |||||| ||||||||| ||||    
T  36177809 ttttgcaatgcgcattattcacatgatttattttgaccatatttttttaactaatatataaataaaaat 36177741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 44563258 - 44563150
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttt-aactaacatataaatataaatgt 208  Q
    |||||||||||| ||| ||||||| ||| ||||  ||| |||| |||| | || |||||||||||  ||| ||||| || ||| ||||||||| | ||||    
T  44563258 ctccatccgttttaaattacatgtcgcaattttataatatgcactattcatataacttactttgatcatatttttttaattaatatataaatacatatgt 44563159  T
Q  209 tagcatgta 217  Q
    |||||||||    
T  44563158 tagcatgta 44563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 6563228 - 6563335
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  6563228 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaatatt 6563327  T
Q  210 agcatgta 217  Q
    ||||||||    
T  6563328 agcatgta 6563335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 24624201 - 24624094
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  24624201 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 24624102  T
Q  210 agcatgta 217  Q
    ||||||||    
T  24624101 agcatgta 24624094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 4147933 - 4148040
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  4147933 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 4148032  T
Q  210 agcatgta 217  Q
    ||||||||    
T  4148033 agcatgta 4148040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 115 - 230
Target Start/End: Original strand, 4440857 - 4440972
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||| |||||||||||||| |||||||| |||| | || |||||||||||| ||||||||||  ||||||||||||| ||||||||||||    
T  4440857 tccgtttcaaaatatatgttgcatttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgttagcat 4440956  T
Q  215 gtacgatattcttcga 230  Q
    ||| ||| || |||||    
T  4440957 gtaagatgttgttcga 4440972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 17257911 - 17257804
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||  || ||||| |||| ||    
T  17257911 ctccatctgtttcaaaatacatgtctaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaatatt 17257812  T
Q  210 agcatgta 217  Q
    ||||||||    
T  17257811 agcatgta 17257804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 19088218 - 19088111
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| | ||||||||||||| ||||||||| |||| ||    
T  19088218 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatatt 19088119  T
Q  210 agcatgta 217  Q
    ||||||||    
T  19088118 agcatgta 19088111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 32414939 - 32414832
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  32414939 ctccctccgtttcaaaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 32414840  T
Q  210 agcatgta 217  Q
    ||||||||    
T  32414839 agcatgta 32414832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 17214044 - 17213937
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| |||||||||||||||   |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||  |||||||| |||| ||    
T  17214044 ctccctccatttcaaaatacatgtctaatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaatatt 17213945  T
Q  210 agcatgta 217  Q
    ||||||||    
T  17213944 agcatgta 17213937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 29790208 - 29790315
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||| |||||||||||||||| ||| |||||||||||  | |||| ||||||||||||| ||| ||| ||||||||||| ||||||||| |||| ||    
T  29790208 ctccatctgtttcaaaatacatgtcgcaattttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatacaaatatt 29790307  T
Q  210 agcatgta 217  Q
    ||||||||    
T  29790308 agcatgta 29790315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 15383185 - 15383083
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   ||||||||||||||||||||| |  ||||||||||| || |||||||||||||||  |||||||| |||| |||||||    
T  15383185 tccgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaatattagcat 15383086  T
Q  215 gta 217  Q
    |||    
T  15383085 gta 15383083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 22054779 - 22054881
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   ||||||||||| |||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  22054779 tccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 22054878  T
Q  215 gta 217  Q
    |||    
T  22054879 gta 22054881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 31569280 - 31569179
Alignment:
Q  116 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 215  Q
    ||||||||||||||||||   ||||||||||||||||||||| || |||||||||||||||||||||||| | |||  |||||||| |||| |||| |||    
T  31569280 ccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatg 31569181  T
Q  216 ta 217  Q
    ||    
T  31569180 ta 31569179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 18668948 - 18668841
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||| ||||||| ||| |||||||||||  |||||||| |||| ||    
T  18668948 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaatacaaatatt 18668849  T
Q  210 agcatgta 217  Q
    ||||||||    
T  18668848 agcatgta 18668841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 20226550 - 20226451
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||||   |||||||||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  20226550 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 20226451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 22120534 - 22120435
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||||   |||||||||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  22120534 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 22120435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 25476068 - 25475977
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 201  Q
    |||| |||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||||  ||||||||||||||  ||||||||    
T  25476068 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata 25475977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 28477764 - 28477862
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||||||  || |||||||||||| | |||| ||||||||| ||||||| ||| ||||||||||| ||||||||| |||| ||||||||||    
T  28477764 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgta 28477862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 15337493 - 15337597
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    |||| |||||||||||||| |  || |||| |||| ||||||||| |||| |||||||||||| ||| ||||||||||| ||||||||| |||| |||||    
T  15337493 catctgtttcaaaatacatttcacaattttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaatacaaatattagc 15337592  T
Q  213 atgta 217  Q
    |||||    
T  15337593 atgta 15337597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 32671818 - 32671925
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || | |||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  32671818 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatatt 32671917  T
Q  210 agcatgta 217  Q
    ||| ||||    
T  32671918 agcgtgta 32671925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 29693894 - 29693992
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||||||  || |||||||||||| | |||| ||||||||| ||||||| ||| ||||||||||| ||||||||| ||||  |||||||||    
T  29693894 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgta 29693992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 3989518 - 3989442
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaa 191  Q
    |||||| ||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||    
T  3989518 tccgttacaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaa 3989442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 17155158 - 17155258
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    ||||||||||||||||| |  |||||  ||||| || |||| ||||||| ||||||||  ||||||  ||||||||||||||||| ||||||||||||||    
T  17155158 cgtttcaaaatacatgtcgtttttttaaaatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgt 17155257  T
Q  217 a 217  Q
    |    
T  17155258 a 17155258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 201
Target Start/End: Original strand, 10520470 - 10520561
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 201  Q
    |||| ||||||||||||||||||||  |||||||||||||| |||||| |  |||||||||||||| |||| | ||||||||  ||||||||    
T  10520470 ctccttccgtttcaaaatacatgttcaatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaata 10520561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 5495252 - 5495358
Alignment:
Q  111 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 210  Q
    ||||||||||| |||||| |||| ||| |||| | |||||||||||||||||   ||| |||||  ||  ||||||||||| ||||||||| ||||||||    
T  5495252 tccatccgttttaaaatatatgtcgcaattttacgatgtgcattatttacatagtttattttgatcatgttttttaactaatatataaatacaaatgtta 5495351  T
Q  211 gcatgta 217  Q
    |||||||    
T  5495352 gcatgta 5495358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 31869715 - 31869817
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||||||||||||||| ||  |||| |||||| || ||||  ||| | |||||||||| ||  ||||||||||| ||||||||| ||||||||||||    
T  31869715 tccgtttcaaaatacatgtcgcgattttacaatgtacactattcccataatttactttgaccattttttttaactaatatataaatacaaatgttagcat 31869814  T
Q  215 gta 217  Q
    |||    
T  31869815 gta 31869817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 2360027 - 2360099
Alignment:
Q  145 aatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||| | |||||| || | |||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  2360027 aatgtgtactatttatataatttactttgactataatttttaactaatatataaataaaaatgttagcatgta 2360099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 217
Target Start/End: Original strand, 1040854 - 1040933
Alignment:
Q  138 tttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||| |||| || ||| |||||||||| |||||||||||||||  |||||||| |||| ||| ||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgta 1040933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 14214166 - 14214066
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    ||||| ||||||||||| ||| ||||  ||||||||||||| |   |||||  ||||||  || |||||||| || ||||||||||||||||||||||||    
T  14214166 cgttttaaaatacatgtcgcaattttataatgtgcattattcatccgacttgttttgaccgtattttttaaccaatatataaatataaatgttagcatgt 14214067  T
Q  217 a 217  Q
    |    
T  14214066 a 14214066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 190
Target Start/End: Complemental strand, 21540880 - 21540809
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaacta 190  Q
    ||||||||||||||||  |||||| ||||||||| |||| |  |||||||||||||| |||||||| |||||    
T  21540880 tttcaaaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaacta 21540809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 3623963 - 3623863
Alignment:
Q  116 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 215  Q
    |||||| |||||| |||| ||| |||| |||| | ||||||| | ||   |||||||||| ||| ||||||||||| ||||||||| |||||||||||||    
T  3623963 ccgttttaaaatatatgtcgcagttttacaatatacattattcatatagtttactttgaccata-tttttaactaatatataaatacaaatgttagcatg 3623865  T
Q  216 ta 217  Q
    ||    
T  3623864 ta 3623863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 12226030 - 12226091
Alignment:
Q  163 gacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatatt 224  Q
    |||||| |||||  |||||||||||||||  ||||||||||||| |||||||||| ||||||    
T  12226030 gacttattttgatcatactttttaactaatgtataaatataaatattagcatgtaagatatt 12226091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 20437274 - 20437177
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-ctttttaactaacatataaatataaat 206  Q
    ||||||||||||  ||||||||||   |||||||||||||||| |||| || |||||||||||||  |||  |||||||||||  |||||||| ||||    
T  20437274 ctccatccgttttcaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaat 20437177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 10298798 - 10298726
Alignment:
Q  145 aatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||| |||| ||||  |||| |||||| ||| ||||| ||||| ||||||||| |||||||||||||||    
T  10298798 aatgtgcactattcacatagcttaatttgaccatattttttcactaatatataaatacaaatgttagcatgta 10298726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 24955629 - 24955549
Alignment:
Q  137 atttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||| ||||||||||||| || ||||||| |||||  ||| |||||||||||   ||||||| |||| ||||||||||    
T  24955629 atttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgta 24955549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 19240823 - 19240738
Alignment:
Q  139 ttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatatt 224  Q
    |||||||||||  | |||| |||| ||||| |||||| ||| ||||||||||| ||||||||| |||| || ||| ||| ||||||    
T  19240823 ttttgcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaagatatt 19240738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 23158115 - 23158062
Alignment:
Q  164 acttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||||| | | ||||||||||| ||||||||| |||||||| ||||||    
T  23158115 acttactttgaccacattttttaactaatatataaatacaaatgttaacatgta 23158062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 3321766 - 3321706
Alignment:
Q  152 attatttacatgacttactttgactata-ctttttaactaacatataaatataaatgttag 211  Q
    |||||| |||||| |||| ||||| ||| |||||||||||| ||| |||||||||||||||    
T  3321766 attattcacatgatttacattgaccatatctttttaactaatatacaaatataaatgttag 3321706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Complemental strand, 26567333 - 26567297
Alignment:
Q  181 tttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  26567333 tttttaactaatatataaatataaatggtagcatgta 26567297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 38916510 - 38916404
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||| ||||||||||| | |||| |||| ||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  38916510 ctccctccgtttcaaaatacatgtcgcatttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaatgtt 38916411  T
Q  210 agcatgt 216  Q
    |||||||    
T  38916410 agcatgt 38916404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 978079 - 978186
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  978079 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 978178  T
Q  210 agcatgta 217  Q
    ||||||||    
T  978179 agcatgta 978186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 8086290 - 8086183
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||| |||| ||    
T  8086290 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatatt 8086191  T
Q  210 agcatgta 217  Q
    | ||||||    
T  8086190 aacatgta 8086183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 14634412 - 14634310
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   |||||||||||||||| || | || |||||||||||||||||||||||||||||| ||||||||| |||| |||||||    
T  14634412 tccgtttcaaaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattagcat 14634313  T
Q  215 gta 217  Q
    |||    
T  14634312 gta 14634310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 9502887 - 9502780
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| ||||||||||||  |||||||||||||||| |||| |  |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  9502887 ctccctccgttttaaaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatatt 9502788  T
Q  210 agcatgta 217  Q
    ||||||||    
T  9502787 agcatgta 9502780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 18094341 - 18094234
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||| || | ||||||||| | ||||||||||||||||  |||||||| |||| ||    
T  18094341 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaatacaaatatt 18094242  T
Q  210 agcatgta 217  Q
    ||||||||    
T  18094241 agcatgta 18094234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 33387222 - 33387329
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| ||| |||||||||||   |||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||| |||| ||    
T  33387222 ctccctccattttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatatt 33387321  T
Q  210 agcatgta 217  Q
    ||||||||    
T  33387322 agcatgta 33387329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 3472530 - 3472430
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    ||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||| ||| |||||||||||   ||||||| |||| |||||||||    
T  3472530 cgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgt 3472431  T
Q  217 a 217  Q
    |    
T  3472430 a 3472430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 12007892 - 12007785
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||| ||||||||  | |||||| ||||||||||||||| ||||||  |||||||||| ||| ||||||||| ||||| |    
T  12007892 ctccctccgtttcaaaatacatgtcgcatttttatattgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatgct 12007793  T
Q  210 agcatgta 217  Q
    ||||||||    
T  12007792 agcatgta 12007785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 18598546 - 18598620
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttt 184  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  18598546 ctccatctgtttcaaaatacatgtcgcatttttgcaatgtgcattattgacatgaattactttgaccatactttt 18598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 223
Target Start/End: Complemental strand, 27579681 - 27579577
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||||||  ||||||||  ||||| |||||| | |||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||    
T  27579681 gtttcaaaatacatgtcacatttttgtgatgtgtattattca-atgacttactttaactatattttttaactaatatataaatacaaatgttagcatgta 27579583  T
Q  218 cgatat 223  Q
     |||||    
T  27579582 agatat 27579577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 33587729 - 33587622
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||| |  |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  33587729 ctccatctgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaatatt 33587630  T
Q  210 agcatgta 217  Q
    | ||||||    
T  33587629 aacatgta 33587622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 39776641 - 39776739
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||| | | ||||||||||||| || |||| |||| ||||| ||||||  |||||||||||||||||||||||| |||| ||||||||||    
T  39776641 tttcaaaatacatttcgtatttttgcaatgtacactattcacataacttattttgaccgtactttttaactaacatataaatacaaatattagcatgta 39776739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 221
Target Start/End: Original strand, 11251145 - 11251227
Alignment:
Q  139 ttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgat 221  Q
    |||||||||||||| |||| || ||||||| |||||| |||||||||||||||  |||||||| |||| ||||||||||||||    
T  11251145 ttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtacgat 11251227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 34111969 - 34112071
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||    ||||||||||||||| |||| || |||||||||||||||||| ||||| |||||  |||||||| |||| ||| |||    
T  34111969 tccgtttcaaaatacatgtctagtttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaatacaaatattatcat 34112068  T
Q  215 gta 217  Q
    |||    
T  34112069 gta 34112071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 30355127 - 30355027
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    |||||||||||||||||   ||||||||||| |||| |||| || ||| ||||||| || |||| |||||||||| ||||||||| |||| |||||||||    
T  30355127 cgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaatattagcatgt 30355028  T
Q  217 a 217  Q
    |    
T  30355027 a 30355027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 7224175 - 7224274
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||| ||||||||||||   ||||||||||||| | ||||||  |||||||||||||| ||||||| |||||||  |||||||| |||| ||||||||||    
T  7224175 gttttaaaatacatgttcattttttgcaatgtgtactatttaattgacttactttgaccatactttctaactaatttataaatacaaatattagcatgta 7224274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 11785977 - 11785895
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 201  Q
    ||||||||||||||||  |||||||||||||| | |||| || |||||||||||||  |||||||||||||||  ||||||||    
T  11785977 tttcaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaata 11785895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 32017220 - 32017322
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||| ||||||||||  ||| ||||   ||||||| |||| |||| |||||||||||  ||| ||||||||||| ||||||||| ||||||||||||    
T  32017220 tccgttttaaaatacatgacgcaattttatgatgtgcaatattcacataacttactttgatcatattttttaactaatatataaatacaaatgttagcat 32017319  T
Q  215 gta 217  Q
    |||    
T  32017320 gta 32017322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 12456886 - 12456793
Alignment:
Q  124 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||| ||||| |||| ||||||||| ||||||||| ||||||||| |  ||| ||||||||||| ||| ||||| ||||||||| |||||    
T  12456886 aaatacatattgcaattttacaatgtgcactatttacataacttactttaatcatattttttaactaatatacaaatacaaatgttagtatgta 12456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 24992398 - 24992294
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   | |||| ||||||||| |||| ||||  ||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  24992398 ctccctccgtttcaaaatacatgtcatagttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaatatt 24992299  T
Q  210 agcat 214  Q
    |||||    
T  24992298 agcat 24992294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 40156200 - 40156307
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||| |   | |||||||||||||| |||| || ||||||||||| || ||| ||||||| |||  |||||||| |||| ||    
T  40156200 ctccctccgtttcaaaatacatatccaacttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaatatt 40156299  T
Q  210 agcatgta 217  Q
    ||||||||    
T  40156300 agcatgta 40156307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 6996012 - 6996089
Alignment:
Q  139 ttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||| |||||||| |||| |||| ||||| ||| |||||| ||||||||||| |||||||||||||||||| ||||||    
T  6996012 ttttgtaatgtgcactattcacataactta-tttaactatattttttaactaatatataaatataaatgttaccatgta 6996089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 26387084 - 26387035
Alignment:
Q  165 cttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  26387084 cttactttgatcatattttttaactaacatataaatataaatgttagcat 26387035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 10696792 - 10696856
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttga 174  Q
    ||||||||||||||||||||| || ||  |||||||||||||| |||| | ||||||||||||||    
T  10696792 ctccatccgtttcaaaatacacgtcgctattttgcaatgtgcactattcatatgacttactttga 10696856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 5947810 - 5947715
Alignment:
Q  111 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    ||||||| ||| |||||||||||  ||||||  | || | ||||||| |||| |||||||||||| ||| |||||| |||||||||||||| ||||    
T  5947810 tccatccattttaaaatacatgtcacattttcacgatatacattattcacataacttactttgacaatattttttagctaacatataaatacaaat 5947715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 24916508 - 24916402
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgac--tatactttttaactaacatataaatataaatg 207  Q
    ||||||||||||||||||||||||  || |||| ||||||| | |||| ||||  |||||||||||  |||  |||||||||||  |||||||| ||||     
T  24916508 ctccatccgtttcaaaatacatgtcacaattttacaatgtgtactattcacatagcttactttgaccatattttttttaactaatttataaatacaaata 24916409  T
Q  208 ttagcat 214  Q
    |||||||    
T  24916408 ttagcat 24916402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 3422429 - 3422363
Alignment:
Q  154 tatttacatgacttactttgactatacttttt---aactaacatataaatataaatgttagcatgta 217  Q
    |||| |||| |||||||||||||||| |||||   |||||| ||||||||| |||||||||||||||    
T  3422429 tattcacataacttactttgactatatttttttttaactaatatataaatacaaatgttagcatgta 3422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 20692641 - 20692544
Alignment:
Q  118 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||| |||||||| ||  |||||||||||||||||||||  || |||| || |||||| |||||||||||| |  ||||||||| |||| ||| ||||||    
T  20692641 gttttaaaatacacgtcacatttttgcaatgtgcattatccacttgacgtattttgaccatactttttaacca--atataaatacaaatattaacatgta 20692544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 9050825 - 9050763
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttacttt 172  Q
    |||| ||||||||||||||||||||  |||||||||| ||||| |||| || | |||||||||    
T  9050825 ctccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttaacttacttt 9050763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 18998706 - 18998796
Alignment:
Q  127 tacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||| ||| |||| |||  ||||||||| ||||   ||||||| || ||| ||||||||||| ||||||||| ||||||||| |||||    
T  18998706 tacatgtcgcaattttacaacatgcattattcacatagtttactttaaccatattttttaactaatatataaatacaaatgttagtatgta 18998796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 31197896 - 31197850
Alignment:
Q  164 acttactttgactatactttttaactaacatataaatataaatgtta 210  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||||||    
T  31197896 acttactttgacaataatttttaactaaaatataaatacaaatgtta 31197850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 616785 - 616892
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  616785 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 616884  T
Q  210 agcatgta 217  Q
    ||||||||    
T  616885 agcatgta 616892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 623178 - 623285
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  623178 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 623277  T
Q  210 agcatgta 217  Q
    ||||||||    
T  623278 agcatgta 623285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 2766303 - 2766201
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||||||||||||| |   |||||||||||||||| ||||||| |||||||||||||| |||||||||||||||  ||||||||||||| |||||||    
T  2766303 tccgtttcaaaatacatatccaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagcat 2766204  T
Q  215 gta 217  Q
    |||    
T  2766203 gta 2766201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 18044427 - 18044534
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  18044427 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 18044526  T
Q  210 agcatgta 217  Q
    ||||||||    
T  18044527 agcatgta 18044534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 42587508 - 42587401
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  42587508 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 42587409  T
Q  210 agcatgta 217  Q
    ||||||||    
T  42587408 agcatgta 42587401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 3100750 - 3100648
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   |||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  3100750 tccgtttcaaaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcat 3100651  T
Q  215 gta 217  Q
    |||    
T  3100650 gta 3100648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 104 - 217
Target Start/End: Complemental strand, 36642125 - 36642011
Alignment:
Q  104 aagctgctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgacta-tactttttaactaacatataaatat 202  Q
    ||||| |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| | |||||||||||| | |||||||||     
T  36642125 aagctactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatac 36642026  T
Q  203 aaatgttagcatgta 217  Q
    |||| ||||||||||    
T  36642025 aaatattagcatgta 36642011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 40494391 - 40494493
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| |||||||    
T  40494391 tccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 40494490  T
Q  215 gta 217  Q
    |||    
T  40494491 gta 40494493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 13216972 - 13216876
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 215  Q
    |||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  13216972 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatg 13216876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 24524102 - 24524198
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 206  Q
    |||| ||||||||||||||||||||  | |||||||||||||| ||||||| |||||||||||||| |||||||||||||||  |||||||| ||||    
T  24524102 ctccttccgtttcaaaatacatgttcaaattttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaat 24524198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 6414225 - 6414135
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaat 200  Q
    |||||||||||| |||||| ||||  ||||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||| ||||||||    
T  6414225 ctccatccgttttaaaataaatgtcacatttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaat 6414135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 14237287 - 14237389
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| |||||||    
T  14237287 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcat 14237386  T
Q  215 gta 217  Q
    |||    
T  14237387 gta 14237389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 32998457 - 32998559
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| |||||||    
T  32998457 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcat 32998556  T
Q  215 gta 217  Q
    |||    
T  32998557 gta 32998559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 5878319 - 5878431
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||| ||||||||||  ||||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  5878319 ctccctccgtttccaaatacatgtc-catttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 5878417  T
Q  210 agcatgtacgatat 223  Q
    |||||||| |||||    
T  5878418 agcatgtaagatat 5878431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 38957175 - 38957279
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    |||||||||||||||| ||||   |||||||||||||||| |||| || ||| |||||||||| ||| |||||||||||| |||||||| |||| |||||    
T  38957175 catccgtttcaaaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagc 38957274  T
Q  213 atgta 217  Q
    |||||    
T  38957275 atgta 38957279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 22489533 - 22489433
Alignment:
Q  111 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 210  Q
    ||||||||||| ||||| |||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||    
T  22489533 tccatccgttttaaaatgcatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 22489434  T
Q  211 g 211  Q
    |    
T  22489433 g 22489433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 35403521 - 35403609
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 201  Q
    |||||||||||||||||||||   |||||||||||||||| |||| || |||| ||||||||| |||||||||||||||  ||||||||    
T  35403521 catccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaata 35403609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 36167078 - 36167182
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| |||||||||||  ||||||||||||||| | |||| || ||||||||||||| |||||||||| |||||  |||||||| |||| ||    
T  36167078 ctccctccgttttaaaatacatgtatcatttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaatatt 36167177  T
Q  210 agcat 214  Q
    |||||    
T  36167178 agcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 41263821 - 41263919
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||||||||| |   |||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||||||||||    
T  41263821 tttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgta 41263919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 224
Target Start/End: Complemental strand, 3370503 - 3370402
Alignment:
Q  123 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgata 222  Q
    ||||||||| |||| ||||||||||||| | | || ||||||||||||||||| ||| ||||||| ||| ||||||||| ||||||||  ||||| ||||    
T  3370503 aaaatacattttgcttttttgcaatgtggactgttcacatgacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagata 3370404  T
Q  223 tt 224  Q
    ||    
T  3370403 tt 3370402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 18090338 - 18090434
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||| ||| ||||||| | |||||| ||||||||| |||||| |||||||| |||||  ||| ||||||||||| ||||||||||||||||||||||    
T  18090338 cgttttaaattacatgtcgaattttttcaatgtgcactatttatatgactta-tttgatcatattttttaactaatatataaatataaatgttagcat 18090434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 132019 - 132126
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||    ||||||||| ||||| |||| || |||||||||||||  ||| |||||||||||  |||||||| |||| ||    
T  132019 ctccctccgtttcaaaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaatatt 132118  T
Q  210 agcatgta 217  Q
    ||||||||    
T  132119 agcatgta 132126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 217
Target Start/End: Complemental strand, 4270347 - 4270245
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 214  Q
    ||||||| |||||||||||   ||||||| |||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||| |||    
T  4270347 tccgttttaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaacat 4270248  T
Q  215 gta 217  Q
    |||    
T  4270247 gta 4270245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 110 - 191
Target Start/End: Original strand, 8394348 - 8394429
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaa 191  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| | | |||||||||||    
T  8394348 ctccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaa 8394429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 33700334 - 33700232
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatt-tttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgt 208  Q
    |||| ||||||||||||||||||| |||   ||| ||||| ||| |||| ||||  ||||||||||| ||| ||||||||||| ||||||||| ||||||    
T  33700334 ctccctccgtttcaaaatacatgtcgcaaaatttacaatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaaatgt 33700235  T
Q  209 tag 211  Q
    |||    
T  33700234 tag 33700232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 18035111 - 18035209
Alignment:
Q  119 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||||||| |||| ||| |||| |||||| |||||||  || | | ||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||    
T  18035111 tttcaaaatatatgtcgcaattttacaatgtacattattcgcacggcgtacattgaccataatttttaactaatatataaatgcaaatgttagcatgta 18035209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 5173259 - 5173360
Alignment:
Q  116 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 215  Q
    |||||| |||||| | |||||| |||||||||||| | |||| | |||| |||||||||  ||| | ||||||||| ||||||||| |||| ||| ||||    
T  5173259 ccgttttaaaatatacgttgcaattttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatg 5173358  T
Q  216 ta 217  Q
    ||    
T  5173359 ta 5173360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 32780144 - 32780081
Alignment:
Q  154 tatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||| ||||||||||| || ||||||  |||||||||  ||||||||||||||||||| |||||    
T  32780144 tattcacatgacttaccttaactatatattttaactagtatataaatataaatgttagtatgta 32780081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 172
Target Start/End: Complemental strand, 13217281 - 13217219
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttacttt 172  Q
    |||| |||||||||||||||||||   ||||||||||||| || |||| || |||||||||||    
T  13217281 ctccttccgtttcaaaatacatgtccaatttttgcaatgtacactattcacttgacttacttt 13217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 11637811 - 11637891
Alignment:
Q  137 atttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    |||||| ||||||||| |||| || ||||||| ||||||  |||||||||||||   |||||||| || | ||||||||||    
T  11637811 atttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgta 11637891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 38497083 - 38497147
Alignment:
Q  108 tgctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttacttt 172  Q
    |||||| ||||||| |||||| |||||  |||||| ||||||||| |||| || |||||||||||    
T  38497083 tgctccctccgttttaaaatatatgttcaatttttacaatgtgcactattcacttgacttacttt 38497147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 13977 - 13870
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||| |||||||||||   || |||| |||||||| |||| || |||||||||||||| |||||||||||||||  ||||||||||||| ||    
T  13977 ctccctccgttttaaaatacatgtctaatatttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatatt 13878  T
Q  210 agcatgta 217  Q
    ||||||||    
T  13877 agcatgta 13870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 9374 - 9433
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttac 169  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || ||||||||    
T  9374 ctccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttac 9433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 100907 - 100800
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||||||||||||||||||||  | |||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  100907 ctccctccgtttcaaaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatatt 100808  T
Q  210 agcatgta 217  Q
    ||| ||||    
T  100807 agcgtgta 100800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 217
Target Start/End: Complemental strand, 162097 - 161990
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| |||||||||||||||||||   ||||||| |||||||| |||| || |||||||| ||||| |||||||||||||||  |||||||| |||| ||    
T  162097 ctccctccgtttcaaaatacatgtctaatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaaatatt 161998  T
Q  210 agcatgta 217  Q
    ||||||||    
T  161997 agcatgta 161990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 9090 - 8986
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    ||||||||||| ||||||| |  || |||| |||| ||||||||| |||| |||||||||||| | | ||||||||||| ||||||||| ||||||||||    
T  9090 catccgtttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagc 8991  T
Q  213 atgta 217  Q
    |||||    
T  8990 atgta 8986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 138287 - 138183
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    ||||| ||||| ||||||| |  || |||| |||| ||||||||| |||| |||||||||||| | | ||||||||||| ||||||||| ||||||||||    
T  138287 catccctttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagc 138188  T
Q  213 atgta 217  Q
    |||||    
T  138187 atgta 138183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 68022 - 67922
Alignment:
Q  117 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 216  Q
    |||||||||||||||||   ||||||| |||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||| |||||    
T  68022 cgtttcaaaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgt 67923  T
Q  217 a 217  Q
    |    
T  67922 a 67922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 22785 - 22889
Alignment:
Q  113 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 212  Q
    ||||||||||| ||||||| |  || |||| |||| ||||||||| |||| ||||| |||||| | | ||||||||| | ||||||||| ||||||||||    
T  22785 catccgtttcataatacatttcacaattttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaaatgttagc 22884  T
Q  213 atgta 217  Q
    |||||    
T  22885 atgta 22889  T

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Target: scaffold0595 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 3964 - 4057
Alignment:
Q  124 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 217  Q
    ||||||| |||| | |||| | ||| ||| |||| ||||  ||||||||||| ||| ||||||||||| ||||||||| |||||||||||||||    
T  3964 aaatacaagttgtaattttacgatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaaatgttagcatgta 4057  T

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Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 70963 - 71066
Alignment:
Q  110 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 209  Q
    |||| ||| |||||||||||||||   ||||||||||| |||| |||| || ||||||| |||||| ||| |||||||||||  |||||||| |||| ||    
T  70963 ctccctccatttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccata-tttttaactaatgtataaatacaaatatt 71061  T
Q  210 agcat 214  Q
    |||||    
T  71062 agcat 71066  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 214
Target Start/End: Complemental strand, 217131 - 217031
Alignment:
Q  115 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-ctttttaactaacatataaatataaatgttagca 213  Q
    |||||||||||||||| || ||| |||| ||||||||| ||||  ||| |||||  ||||| |||  ||||||| ||| ||||||||| |||||||||||    
T  217131 tccgtttcaaaatacaagtcgcaattttacaatgtgcaatattctcataacttatgttgaccatatttttttaagtaatatataaatacaaatgttagca 217032  T
Q  214 t 214  Q
    |    
T  217031 t 217031  T

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