View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2033_high_6 (Length: 258)
Name: NF2033_high_6
Description: NF2033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2033_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 10 - 243
Target Start/End: Complemental strand, 1215469 - 1215236
Alignment:
| Q |
10 |
atgaacactaaacacgaatacgtcgacgccggtgataattttaaaaattgatataattaaatgtaactatatatgtcaatgttgaacaagaatatatgtt |
109 |
Q |
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| T |
1215469 |
atgaacactaaacacgaacacgtcgacgccagtgataattttaaaaattgatataattaaatgtgactatatatgtcaatgttgaacaagaacatatgtt |
1215370 |
T |
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| Q |
110 |
aagacatcaaaatacattcagcctcggagagatttacttcgaatagagagaataatatatgagaacaaaaacagtgatttattaaagtttgatcattttt |
209 |
Q |
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| T |
1215369 |
aagacatcaaaatacattcagcctcggggagatttacttcgaatagagagaataatatatgagaacaaaaacaatgatttattaaagtttgatcattttt |
1215270 |
T |
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| Q |
210 |
aatttaaaaacaagcttttagcgtagttttcttt |
243 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
1215269 |
aatttaaaaacaagcttttagcgtagttttcttt |
1215236 |
T |
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