View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2033_low_3 (Length: 306)
Name: NF2033_low_3
Description: NF2033
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2033_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 19 - 287
Target Start/End: Complemental strand, 41702083 - 41701809
Alignment:
| Q |
19 |
gagaaaggaagtaaagtgattccaaaactggttttgattcgatgacaaagaaacattagaatcatatgccatcttctttagataatatgaactataatat |
118 |
Q |
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| T |
41702083 |
gagaaaggaagtaaagtgattccaaaactggttttgattcgatgacaaagaaacattagaatcatatgccatcttctttagataatatgaactataatat |
41701984 |
T |
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| Q |
119 |
tcaaaagtatatgcaagtattagaatatttggaatggtttgtattgtcctccaaagtggtcttccttttgcaactaaggaaagtgttt------gagttt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |
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| T |
41701983 |
tcaaaagtatatgcaagtattagaatatttggaatggtttgtattgtcctccaaagtggtcttccttttgcaactaaggaaagtgttttcactcaaagtt |
41701884 |
T |
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| Q |
213 |
ttaaaatggaaatttcattttcttatagtaggaaagcaccaccatggttatgattagtctaatccatgaaggatt |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41701883 |
ttaaaatggaaatttcattttcttatagtaggaaagcaccaccatggttatgattagtctaatccatgaaggatt |
41701809 |
T |
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