View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20341_high_11 (Length: 415)

Name: NF20341_high_11
Description: NF20341
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20341_high_11
NF20341_high_11
[»] chr8 (5 HSPs)
chr8 (1-398)||(17083363-17083762)
chr8 (311-385)||(15326700-15326774)
chr8 (311-385)||(15507069-15507143)
chr8 (311-398)||(6094625-6094712)
chr8 (314-398)||(28548552-28548636)
[»] chr6 (9 HSPs)
chr6 (311-398)||(17684087-17684174)
chr6 (311-398)||(11652225-11652312)
chr6 (311-398)||(17691058-17691145)
chr6 (311-398)||(27380870-27380957)
chr6 (311-398)||(27471253-27471340)
chr6 (311-398)||(29309392-29309479)
chr6 (311-398)||(29316351-29316438)
chr6 (311-385)||(27297131-27297205)
chr6 (311-398)||(25536809-25536896)
[»] scaffold0390 (1 HSPs)
scaffold0390 (311-398)||(6552-6639)
[»] scaffold0234 (2 HSPs)
scaffold0234 (311-398)||(1939-2026)
scaffold0234 (311-398)||(10830-10917)
[»] chr7 (7 HSPs)
chr7 (311-398)||(12751328-12751415)
chr7 (311-398)||(15152945-15153032)
chr7 (311-398)||(11535680-11535767)
chr7 (311-398)||(11542598-11542685)
chr7 (311-398)||(12739038-12739125)
chr7 (311-398)||(18561500-18561587)
chr7 (311-398)||(29328286-29328373)
[»] chr4 (14 HSPs)
chr4 (311-398)||(869099-869186)
chr4 (311-398)||(5707822-5707909)
chr4 (311-398)||(5714450-5714537)
chr4 (311-398)||(8858669-8858756)
chr4 (311-398)||(10620951-10621038)
chr4 (311-398)||(10628030-10628117)
chr4 (311-398)||(18262714-18262801)
chr4 (311-398)||(18269575-18269662)
chr4 (311-398)||(28392752-28392839)
chr4 (311-398)||(55613185-55613272)
chr4 (311-385)||(26964142-26964216)
chr4 (311-385)||(26970965-26971039)
chr4 (311-398)||(19926378-19926465)
chr4 (311-383)||(35224062-35224134)
[»] chr3 (13 HSPs)
chr3 (311-398)||(8490997-8491084)
chr3 (311-398)||(10572210-10572297)
chr3 (311-398)||(10578974-10579061)
chr3 (311-398)||(13211804-13211891)
chr3 (311-398)||(13249109-13249196)
chr3 (311-398)||(13517309-13517396)
chr3 (311-398)||(15341837-15341924)
chr3 (311-398)||(15600502-15600589)
chr3 (311-398)||(15607047-15607134)
chr3 (311-398)||(16482101-16482188)
chr3 (311-398)||(32056517-32056604)
chr3 (311-398)||(15357204-15357291)
chr3 (311-385)||(17780749-17780823)
[»] chr2 (2 HSPs)
chr2 (311-398)||(21329866-21329953)
chr2 (311-398)||(22791476-22791563)
[»] chr1 (3 HSPs)
chr1 (311-398)||(18252532-18252619)
chr1 (311-398)||(18532132-18532219)
chr1 (311-398)||(27131028-27131115)
[»] scaffold0433 (1 HSPs)
scaffold0433 (311-398)||(7609-7696)
[»] scaffold0220 (1 HSPs)
scaffold0220 (311-398)||(18789-18876)
[»] scaffold0186 (1 HSPs)
scaffold0186 (311-398)||(25608-25695)
[»] scaffold0063 (1 HSPs)
scaffold0063 (311-385)||(6024-6098)
[»] scaffold0008 (1 HSPs)
scaffold0008 (316-398)||(230009-230091)
[»] chr5 (3 HSPs)
chr5 (312-398)||(19714116-19714202)
chr5 (312-384)||(19706851-19706923)
chr5 (311-383)||(28719388-28719460)


Alignment Details
Target: chr8 (Bit Score: 369; Significance: 0; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 1 - 398
Target Start/End: Original strand, 17083363 - 17083762
Alignment:
Q  1 ggtttgcagggtcattgaaatttgataaacaatatagcatccaattgttttgaccttaacttgaatgtaagacaaagatttatagtgcttcctaaatgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17083363 ggtttgcagggtcattgaaatttgataaacaatatagcatccaattgttttgaccttaacttgaatgtaagacaaagatttatagtgcttcctaaatgtt 17083462  T
Q  101 tctttgctaggaatctaatatagatccaactgtggcagagtccaatttttaaacccagcaatttctgattctgagcatagataatgaaag--catcgatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  17083463 tctttgctaggaatctaatatagatccaactgtggcagagtccaatttttaaacccagcaatttctgattctgagcatagataatgaaagcacatcgatt 17083562  T
Q  199 atagtccatgtaaggaacataaatatggttatttcgggtaacacaaactttggtggcaagaaaaaagctagaagggtgttggtaatggcggaaatggagg 298  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17083563 atagtccatgtaaggaacataaatatagttatttcgggtaacacaaactttggtggcaagaaaaaagctagaagggtgttggtaatggcggaaatggagg 17083662  T
Q  299 gtcttagtatactgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  17083663 gtcttagtatactgacctagatggaatttgtgcttcttacataacagcaaaaatgtctatgggttcaatattaaactagacagggatgacatggtgtatg 17083762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 15326700 - 15326774
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggat 385  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| ||||||||||||||    
T  15326700 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggat 15326774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 15507069 - 15507143
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggat 385  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| ||||||||||||||    
T  15507069 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggat 15507143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 6094625 - 6094712
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||| ||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  6094625 tgaccaagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 6094712  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 398
Target Start/End: Original strand, 28548552 - 28548636
Alignment:
Q  314 cctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    |||||||||||||||| | || |||||| ||  | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  28548552 cctagatggaatttgcccctcctacataacatgagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 28548636  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 17684174 - 17684087
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | |||||||||||||  ||||||| |||||||||||||| ||| ||| ||||    
T  17684174 tgacctagatggaatttgcccctcctacataacaggagaaatgtctatgggcccaatattgaactagacaaggatgacacggtctatg 17684087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 11652225 - 11652312
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  11652225 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 11652312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 17691145 - 17691058
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  17691145 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 17691058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 27380957 - 27380870
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  27380957 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 27380870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 27471340 - 27471253
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  27471340 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 27471253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 29309392 - 29309479
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  29309392 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 29309479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 29316351 - 29316438
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  29316351 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 29316438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 27297131 - 27297205
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggat 385  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| ||||||||||||||    
T  27297131 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggat 27297205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 25536896 - 25536809
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| | |  ||||||| |||||||||||||| ||| ||| ||||    
T  25536896 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgtgcccaatattgaactagacaaggatgacacggtctatg 25536809  T

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Target: scaffold0390 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 6639 - 6552
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||  | || |||||| ||| | |||||||||||||  ||||||| |||||||||||||| ||| ||| ||||    
T  6639 tgacctagatggaatttgtccctcctacataacaggagaaatgtctatgggcccaatattgaactagacaaggatgacacggtctatg 6552  T

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Target: scaffold0234 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 2026 - 1939
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  2026 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 1939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 10917 - 10830
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  10917 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 10830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 12751328 - 12751415
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  12751328 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 12751415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 15152945 - 15153032
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  15152945 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 15153032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 11535767 - 11535680
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||| | | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  11535767 tgacctagatggaattttcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 11535680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 11542685 - 11542598
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||| ||||||||| ||| ||| ||||    
T  11542685 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaacttgacaaggatgacacggtctatg 11542598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 12739038 - 12739125
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||  | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  12739038 tgacctagatggaatttggccctcctacataacaggagaaatgtctacgggaccaatattgaactagacaaggatgacacggtctatg 12739125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 18561500 - 18561587
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||| ||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  18561500 tgacctagagggaatttgcccctcctacataacagaagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 18561587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 29328286 - 29328373
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    |||||||||||||| |||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  29328286 tgacctagatggaacttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 29328373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 869099 - 869186
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  869099 tgacctagatggaatttgctcctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 869186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 5707822 - 5707909
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  5707822 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 5707909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 5714450 - 5714537
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  5714450 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 5714537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 8858669 - 8858756
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  8858669 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 8858756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 10621038 - 10620951
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  10621038 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 10620951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 10628117 - 10628030
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  10628117 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 10628030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 18262714 - 18262801
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  18262714 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 18262801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 18269575 - 18269662
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  18269575 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 18269662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 28392839 - 28392752
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  28392839 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 28392752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 55613185 - 55613272
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  55613185 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 55613272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 26964142 - 26964216
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggat 385  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| ||||||||||||||    
T  26964142 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggat 26964216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 26970965 - 26971039
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggat 385  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| ||||||||||||||    
T  26970965 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggat 26971039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 19926465 - 19926378
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | |||| |||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  19926465 tgacctagatggaatttgcccctcctacataacaggagaaatatctacgggcccaatattgaactagacaaggatgacacggtctatg 19926378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 383
Target Start/End: Original strand, 35224062 - 35224134
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaagg 383  Q
    ||||||||||||||||||| | || ||||||  || | ||||||||| |||  ||||||| ||||||||||||    
T  35224062 tgacctagatggaatttgcccctcctacataataggagaaatgtctacgggcccaatattgaactagacaagg 35224134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 8490997 - 8491084
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  8490997 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 8491084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 10572297 - 10572210
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  10572297 tgacctagatggaatttgctcctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 10572210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 10579061 - 10578974
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  10579061 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 10578974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 13211804 - 13211891
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  13211804 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 13211891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 13249109 - 13249196
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  13249109 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 13249196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 13517309 - 13517396
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  13517309 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 13517396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 15341924 - 15341837
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||| | |||| |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  15341924 tgacctagatggaatttacccttcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 15341837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 15600589 - 15600502
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  15600589 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 15600502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 15607134 - 15607047
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  15607134 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 15607047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 16482188 - 16482101
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  16482188 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 16482101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 32056604 - 32056517
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  32056604 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 32056517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 15357291 - 15357204
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||| | | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  15357291 tgacctagatggaatttacccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtttatg 15357204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 17780823 - 17780749
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggat 385  Q
    |||||||||||||||||||   || |||||| ||| | ||||||||| |||  ||||||| ||||||||||||||    
T  17780823 tgacctagatggaatttgcctctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggat 17780749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 21329953 - 21329866
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  21329953 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 21329866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 22791563 - 22791476
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | || |||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  22791563 tgacctagatggaatttgcccctcctacataacaggagaattgtctacgggaccaatattgaactagacaaggatgacacggtctatg 22791476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 18252532 - 18252619
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  18252532 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 18252619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 18532219 - 18532132
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  18532219 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 18532132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 27131115 - 27131028
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||| ||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||| ||| ||||    
T  27131115 tgacctagatgtaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatg 27131028  T

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Target: scaffold0433 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 7609 - 7696
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | |||||||||  ||  ||||||| |||||||||||||| ||| ||| ||||    
T  7609 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacaggcccaatattgaactagacaaggatgacacggtctatg 7696  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 18789 - 18876
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| ||| |||||||||| ||| ||| ||||    
T  18789 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaacgagacaaggatgacacggtctatg 18876  T

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Target: scaffold0186 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Complemental strand, 25695 - 25608
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    |||||||||||||||| || | || ||| || ||| | ||||||||| |||  ||||||| |||||||||||||| ||||||| ||||    
T  25695 tgacctagatggaattcgcccctcctacgtaacaggagaaatgtctacgggcccaatattgaactagacaaggatgacatggtctatg 25608  T

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Target: scaffold0063 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 385
Target Start/End: Original strand, 6024 - 6098
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggat 385  Q
    ||||||||||||||||||| | || |||||| ||| | ||||||||| |||   |||||| ||||||||||||||    
T  6024 tgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggccaaatattcaactagacaaggat 6098  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 398
Target Start/End: Complemental strand, 230091 - 230009
Alignment:
Q  316 tagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    ||||||||||| || | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||| ||||||| ||||    
T  230091 tagatggaattcgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacatggtttatg 230009  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 398
Target Start/End: Complemental strand, 19714202 - 19714116
Alignment:
Q  312 gacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaaggatcacatggtgtatg 398  Q
    |||||||||||||||||| | || |||||| ||| | ||||||||| |||  ||||||| ||||| |||||||| ||| ||| ||||    
T  19714202 gacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactatacaaggatgacacggtctatg 19714116  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 312 - 384
Target Start/End: Complemental strand, 19706923 - 19706851
Alignment:
Q  312 gacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaagga 384  Q
    |||||||||| ||||||| | || |||||| ||| | ||||||||| |||  ||||||| |||||||||||||    
T  19706923 gacctagatgaaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaagga 19706851  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 383
Target Start/End: Complemental strand, 28719460 - 28719388
Alignment:
Q  311 tgacctagatggaatttgcgcttcttacatatcagcaaaaatgtctatgggttcaatattaaactagacaagg 383  Q
    ||||||||||| ||||| | |||| |||||| ||  | ||||||| | |||| ||||||||||||||||||||    
T  28719460 tgacctagatgaaattttcccttcctacataacaagagaaatgtcaacgggtccaatattaaactagacaagg 28719388  T

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