View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20345_low_16 (Length: 313)

Name: NF20345_low_16
Description: NF20345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20345_low_16
NF20345_low_16
[»] chr5 (46 HSPs)
chr5 (14-297)||(26122182-26122465)
chr5 (103-291)||(17469578-17469766)
chr5 (91-297)||(18832099-18832305)
chr5 (121-291)||(24162031-24162201)
chr5 (121-291)||(34488764-34488934)
chr5 (100-297)||(29798930-29799127)
chr5 (100-291)||(31600095-31600286)
chr5 (100-291)||(19003785-19003976)
chr5 (121-291)||(24263770-24263940)
chr5 (101-291)||(18939407-18939597)
chr5 (121-291)||(22845815-22845985)
chr5 (103-291)||(25920721-25920908)
chr5 (103-291)||(26348331-26348519)
chr5 (102-291)||(25400758-25400945)
chr5 (195-291)||(26069230-26069326)
chr5 (133-297)||(26117356-26117520)
chr5 (100-285)||(20860225-20860410)
chr5 (111-266)||(24261963-24262119)
chr5 (101-291)||(29987843-29988034)
chr5 (132-298)||(24188814-24188983)
chr5 (102-291)||(19052989-19053178)
chr5 (100-291)||(23387567-23387758)
chr5 (100-291)||(24320541-24320733)
chr5 (106-258)||(24849620-24849771)
chr5 (100-291)||(24142293-24142484)
chr5 (102-266)||(24513231-24513395)
chr5 (87-158)||(15520848-15520919)
chr5 (100-239)||(20548525-20548663)
chr5 (100-291)||(28666378-28666569)
chr5 (102-240)||(18227500-18227636)
chr5 (101-291)||(34131973-34132163)
chr5 (227-291)||(23110216-23110280)
chr5 (50-163)||(16522051-16522168)
chr5 (25-79)||(17469816-17469870)
chr5 (25-83)||(25572716-25572774)
chr5 (15-84)||(18831997-18832066)
chr5 (100-157)||(26253355-26253411)
chr5 (100-149)||(32415992-32416041)
chr5 (15-83)||(24265533-24265601)
chr5 (15-83)||(24342164-24342232)
chr5 (99-166)||(19761726-19761792)
chr5 (100-163)||(24658448-24658510)
chr5 (19-82)||(24658555-24658618)
chr5 (16-83)||(26314997-26315064)
chr5 (17-83)||(19761834-19761900)
chr5 (251-291)||(15691305-15691345)
[»] chr6 (52 HSPs)
chr6 (101-291)||(22564569-22564759)
chr6 (102-291)||(23644337-23644526)
chr6 (111-277)||(9507304-9507470)
chr6 (138-291)||(8246537-8246689)
chr6 (102-288)||(9897891-9898076)
chr6 (111-285)||(2588193-2588367)
chr6 (102-291)||(24469686-24469875)
chr6 (100-291)||(13216324-13216516)
chr6 (101-291)||(1636521-1636710)
chr6 (197-291)||(21687149-21687243)
chr6 (142-291)||(14641560-14641709)
chr6 (102-291)||(22404274-22404462)
chr6 (102-291)||(24479912-24480101)
chr6 (140-291)||(6628994-6629146)
chr6 (102-297)||(15600428-15600622)
chr6 (100-287)||(19593999-19594188)
chr6 (101-266)||(8066539-8066704)
chr6 (102-291)||(19246164-19246353)
chr6 (103-291)||(14076285-14076473)
chr6 (79-165)||(8038196-8038282)
chr6 (100-166)||(27961100-27961165)
chr6 (102-235)||(9339054-9339186)
chr6 (100-240)||(3358029-3358168)
chr6 (195-291)||(17847761-17847857)
chr6 (100-284)||(21079748-21079931)
chr6 (100-291)||(30356149-30356340)
chr6 (143-297)||(21932403-21932558)
chr6 (25-83)||(6629228-6629286)
chr6 (91-291)||(9840903-9841096)
chr6 (100-286)||(19577562-19577747)
chr6 (97-159)||(21760559-21760621)
chr6 (102-291)||(9519620-9519809)
chr6 (102-291)||(14723573-14723761)
chr6 (100-291)||(17822043-17822236)
chr6 (100-245)||(20080623-20080767)
chr6 (182-291)||(21152511-21152620)
chr6 (14-83)||(23644572-23644641)
chr6 (182-297)||(14078005-14078121)
chr6 (100-163)||(15585978-15586041)
chr6 (100-239)||(18171325-18171463)
chr6 (15-80)||(10822012-10822077)
chr6 (15-83)||(8246401-8246469)
chr6 (91-291)||(9848040-9848240)
chr6 (15-83)||(9898122-9898190)
chr6 (101-245)||(24389213-24389357)
chr6 (95-163)||(32759850-32759917)
chr6 (100-163)||(22411552-22411615)
chr6 (221-291)||(14727141-14727211)
chr6 (15-77)||(32759744-32759806)
chr6 (229-297)||(17384038-17384106)
chr6 (220-296)||(19721861-19721936)
chr6 (134-166)||(23087253-23087285)
[»] chr7 (75 HSPs)
chr7 (79-287)||(10418423-10418630)
chr7 (101-297)||(21502741-21502938)
chr7 (79-291)||(144842-145052)
chr7 (121-297)||(6039311-6039487)
chr7 (111-291)||(23127914-23128094)
chr7 (102-291)||(6018246-6018435)
chr7 (111-291)||(9767682-9767862)
chr7 (123-297)||(23897149-23897323)
chr7 (101-297)||(9288797-9288993)
chr7 (101-297)||(9298589-9298785)
chr7 (121-291)||(3736246-3736413)
chr7 (100-291)||(10332290-10332481)
chr7 (133-291)||(21707357-21707516)
chr7 (100-291)||(5236886-5237077)
chr7 (101-291)||(8052449-8052639)
chr7 (196-291)||(14195730-14195825)
chr7 (100-291)||(26249095-26249286)
chr7 (100-291)||(9078901-9079093)
chr7 (100-292)||(21233989-21234181)
chr7 (182-291)||(23173705-23173814)
chr7 (100-291)||(7399224-7399404)
chr7 (139-291)||(8977490-8977642)
chr7 (101-291)||(4450557-4450748)
chr7 (104-239)||(8317513-8317648)
chr7 (101-291)||(11804586-11804775)
chr7 (102-290)||(1589127-1589316)
chr7 (133-277)||(5221002-5221146)
chr7 (19-82)||(3585779-3585842)
chr7 (100-297)||(3585536-3585734)
chr7 (100-166)||(5046979-5047044)
chr7 (101-291)||(6046414-6046604)
chr7 (195-291)||(1586172-1586268)
chr7 (15-83)||(15171017-15171085)
chr7 (111-266)||(25692686-25692842)
chr7 (100-163)||(20175980-20176042)
chr7 (100-239)||(20577390-20577529)
chr7 (220-287)||(39270296-39270363)
chr7 (14-84)||(7399112-7399182)
chr7 (138-291)||(9918091-9918244)
chr7 (138-291)||(9926003-9926156)
chr7 (102-163)||(20597488-20597549)
chr7 (15-83)||(8309991-8310059)
chr7 (15-83)||(9767559-9767627)
chr7 (27-83)||(10585440-10585496)
chr7 (100-291)||(18986764-18986955)
chr7 (100-291)||(19001392-19001583)
chr7 (19-79)||(25692567-25692627)
chr7 (101-163)||(2505730-2505792)
chr7 (102-239)||(2506881-2507019)
chr7 (207-290)||(2565899-2565982)
chr7 (124-291)||(10611623-10611790)
chr7 (121-290)||(8317108-8317270)
chr7 (79-297)||(15170778-15170994)
chr7 (15-83)||(1589012-1589080)
chr7 (182-291)||(3173678-3173787)
chr7 (121-290)||(10585208-10585377)
chr7 (22-82)||(17831024-17831084)
chr7 (15-83)||(21233878-21233946)
chr7 (22-82)||(26249331-26249391)
chr7 (100-143)||(1732557-1732600)
chr7 (100-163)||(9134694-9134757)
chr7 (101-163)||(1254844-1254905)
chr7 (91-235)||(5471810-5471950)
chr7 (101-163)||(13252805-13252867)
chr7 (121-163)||(19154744-19154786)
chr7 (121-163)||(20754143-20754185)
chr7 (15-80)||(20175869-20175934)
chr7 (102-166)||(4988105-4988169)
chr7 (102-166)||(4992203-4992267)
chr7 (103-163)||(8158829-8158889)
chr7 (133-165)||(9501931-9501963)
chr7 (101-216)||(9722338-9722453)
chr7 (15-75)||(10418331-10418391)
chr7 (106-166)||(15611184-15611243)
chr7 (15-83)||(21428571-21428639)
[»] scaffold0024 (1 HSPs)
scaffold0024 (102-291)||(41227-41416)
[»] chr4 (54 HSPs)
chr4 (79-291)||(25024972-25025183)
chr4 (100-291)||(9849727-9849918)
chr4 (111-289)||(19883534-19883712)
chr4 (111-291)||(5691653-5691832)
chr4 (97-297)||(10106178-10106378)
chr4 (101-291)||(14573336-14573525)
chr4 (100-292)||(17711192-17711384)
chr4 (142-297)||(22350254-22350409)
chr4 (121-297)||(15166375-15166551)
chr4 (79-291)||(20828159-20828370)
chr4 (100-291)||(11512046-11512237)
chr4 (139-291)||(7583717-7583869)
chr4 (100-283)||(16928810-16928993)
chr4 (129-291)||(9263370-9263532)
chr4 (100-266)||(17108604-17108770)
chr4 (102-287)||(9053894-9054078)
chr4 (100-291)||(11252149-11252339)
chr4 (100-291)||(18447460-18447650)
chr4 (125-291)||(17277756-17277922)
chr4 (101-291)||(17335375-17335565)
chr4 (111-291)||(9536775-9536957)
chr4 (102-261)||(10236478-10236636)
chr4 (195-289)||(12616695-12616789)
chr4 (221-291)||(12836090-12836160)
chr4 (133-291)||(16669741-16669899)
chr4 (103-291)||(8968091-8968279)
chr4 (25-82)||(9849962-9850019)
chr4 (155-291)||(17434375-17434511)
chr4 (103-291)||(15047654-15047844)
chr4 (103-291)||(15106580-15106770)
chr4 (15-82)||(17277621-17277688)
chr4 (130-297)||(18750740-18750907)
chr4 (92-151)||(19335370-19335429)
chr4 (103-266)||(19603902-19604064)
chr4 (100-282)||(10432064-10432246)
chr4 (125-291)||(19919159-19919323)
chr4 (100-157)||(17661836-17661892)
chr4 (102-291)||(19556561-19556746)
chr4 (15-79)||(10236364-10236428)
chr4 (100-160)||(11782366-11782426)
chr4 (207-291)||(11782485-11782569)
chr4 (27-83)||(19927079-19927135)
chr4 (15-83)||(25024881-25024949)
chr4 (15-83)||(26114455-26114523)
chr4 (19-82)||(8968327-8968390)
chr4 (19-82)||(16928702-16928765)
chr4 (100-163)||(19547200-19547262)
chr4 (15-78)||(22345852-22345915)
chr4 (121-175)||(12246701-12246754)
chr4 (101-163)||(25118016-25118077)
chr4 (15-80)||(19547308-19547373)
chr4 (101-216)||(13588605-13588720)
chr4 (139-239)||(17218454-17218554)
chr4 (210-298)||(19094246-19094334)
[»] chr2 (81 HSPs)
chr2 (101-291)||(17891618-17891808)
chr2 (104-297)||(18553179-18553372)
chr2 (199-291)||(35680120-35680212)
chr2 (100-291)||(17350864-17351055)
chr2 (100-297)||(27907536-27907733)
chr2 (182-291)||(16257828-16257937)
chr2 (111-291)||(11464338-11464517)
chr2 (64-291)||(24086326-24086556)
chr2 (79-291)||(34579793-34580005)
chr2 (79-291)||(34585542-34585754)
chr2 (100-291)||(18758187-18758378)
chr2 (100-291)||(25532122-25532313)
chr2 (100-291)||(25537442-25537633)
chr2 (100-285)||(22627271-22627455)
chr2 (102-291)||(32086936-32087125)
chr2 (135-287)||(18545193-18545345)
chr2 (97-287)||(27540289-27540479)
chr2 (91-291)||(29717377-29717575)
chr2 (100-291)||(25886211-25886402)
chr2 (102-291)||(22568941-22569131)
chr2 (100-285)||(28930160-28930346)
chr2 (112-297)||(26651651-26651834)
chr2 (103-291)||(17199416-17199602)
chr2 (130-294)||(29850932-29851096)
chr2 (101-291)||(34574400-34574591)
chr2 (111-291)||(27420969-27421148)
chr2 (139-291)||(28766777-28766929)
chr2 (100-291)||(32141411-32141602)
chr2 (111-166)||(25883499-25883554)
chr2 (121-291)||(23010063-23010233)
chr2 (102-291)||(21905614-21905803)
chr2 (103-239)||(20379175-20379311)
chr2 (195-291)||(28918169-28918265)
chr2 (15-79)||(32086802-32086866)
chr2 (142-265)||(19139570-19139693)
chr2 (100-163)||(34369213-34369275)
chr2 (195-240)||(38796163-38796208)
chr2 (195-287)||(45572389-45572482)
chr2 (195-287)||(45576056-45576149)
chr2 (195-287)||(45579723-45579816)
chr2 (195-287)||(45583390-45583483)
chr2 (195-287)||(45587057-45587150)
chr2 (195-287)||(45590724-45590817)
chr2 (195-287)||(45594391-45594484)
chr2 (195-287)||(45598058-45598151)
chr2 (195-287)||(45601725-45601818)
chr2 (195-287)||(45605392-45605485)
chr2 (195-287)||(45609059-45609152)
chr2 (195-287)||(45612726-45612819)
chr2 (195-287)||(45616393-45616486)
chr2 (15-83)||(11464569-11464637)
chr2 (15-83)||(17891505-17891573)
chr2 (100-291)||(18120565-18120759)
chr2 (15-83)||(27420847-27420915)
chr2 (102-234)||(29834753-29834885)
chr2 (100-155)||(8445629-8445684)
chr2 (103-158)||(16042814-16042868)
chr2 (100-163)||(19198625-19198688)
chr2 (19-82)||(21905504-21905567)
chr2 (182-297)||(26313146-26313261)
chr2 (195-297)||(16157098-16157200)
chr2 (101-163)||(20852969-20853031)
chr2 (25-79)||(28766648-28766702)
chr2 (135-291)||(32139354-32139512)
chr2 (226-291)||(18458384-18458449)
chr2 (29-82)||(18758089-18758142)
chr2 (103-160)||(29144523-29144580)
chr2 (15-60)||(45572644-45572689)
chr2 (15-60)||(45576311-45576356)
chr2 (15-60)||(45579978-45580023)
chr2 (15-60)||(45583645-45583690)
chr2 (15-60)||(45587312-45587357)
chr2 (15-60)||(45590979-45591024)
chr2 (15-60)||(45594646-45594691)
chr2 (15-60)||(45598313-45598358)
chr2 (15-60)||(45601980-45602025)
chr2 (15-60)||(45605647-45605692)
chr2 (15-60)||(45609314-45609359)
chr2 (15-60)||(45612981-45613026)
chr2 (15-60)||(45616648-45616693)
chr2 (227-291)||(25882590-25882654)
[»] chr8 (58 HSPs)
chr8 (118-291)||(24380373-24380546)
chr8 (111-285)||(4007177-4007351)
chr8 (100-297)||(24381339-24381537)
chr8 (102-291)||(7985005-7985194)
chr8 (101-277)||(19784814-19784990)
chr8 (103-291)||(14271730-14271918)
chr8 (111-285)||(19791290-19791464)
chr8 (100-297)||(15176446-15176642)
chr8 (102-291)||(20400222-20400411)
chr8 (103-291)||(30117678-30117866)
chr8 (100-291)||(19265708-19265899)
chr8 (121-291)||(6886575-6886747)
chr8 (79-291)||(22501700-22501910)
chr8 (100-291)||(24583191-24583382)
chr8 (102-291)||(26888374-26888563)
chr8 (92-288)||(14077001-14077195)
chr8 (100-266)||(17980679-17980845)
chr8 (182-291)||(13313291-13313400)
chr8 (111-291)||(15058524-15058703)
chr8 (100-239)||(26139674-26139813)
chr8 (100-239)||(24388444-24388582)
chr8 (100-238)||(30832825-30832963)
chr8 (111-291)||(12342911-12343090)
chr8 (111-291)||(18007433-18007612)
chr8 (103-291)||(24090898-24091085)
chr8 (139-297)||(17510831-17510987)
chr8 (141-291)||(37527046-37527196)
chr8 (111-276)||(2638617-2638782)
chr8 (195-291)||(5856760-5856855)
chr8 (15-83)||(24380607-24380675)
chr8 (15-83)||(24381580-24381648)
chr8 (100-291)||(28903987-28904178)
chr8 (92-291)||(17835422-17835620)
chr8 (195-289)||(23867851-23867945)
chr8 (102-291)||(28621493-28621681)
chr8 (100-240)||(24851015-24851155)
chr8 (182-291)||(25180741-25180850)
chr8 (15-83)||(7984890-7984958)
chr8 (111-163)||(21316680-21316732)
chr8 (103-291)||(24389645-24389833)
chr8 (64-291)||(26829486-26829716)
chr8 (202-266)||(28275359-28275423)
chr8 (100-291)||(29765411-29765603)
chr8 (18-83)||(15058757-15058822)
chr8 (103-216)||(18570418-18570531)
chr8 (101-238)||(24109107-24109244)
chr8 (103-163)||(21230814-21230874)
chr8 (19-82)||(15176687-15176750)
chr8 (16-83)||(19785034-19785101)
chr8 (100-159)||(24520152-24520211)
chr8 (101-239)||(25481577-25481716)
chr8 (15-77)||(22501609-22501671)
chr8 (112-166)||(24091714-24091768)
chr8 (121-166)||(15557296-15557340)
chr8 (195-291)||(18446879-18446975)
chr8 (211-291)||(19704983-19705063)
chr8 (27-82)||(23868085-23868141)
chr8 (251-291)||(24382006-24382046)
[»] chr1 (61 HSPs)
chr1 (87-291)||(21848499-21848703)
chr1 (121-291)||(16363530-16363700)
chr1 (100-288)||(27116246-27116433)
chr1 (121-290)||(33192259-33192428)
chr1 (101-297)||(44797004-44797201)
chr1 (100-291)||(22626174-22626365)
chr1 (121-291)||(15571708-15571878)
chr1 (97-291)||(18527516-18527710)
chr1 (102-284)||(35133772-35133954)
chr1 (103-287)||(14235308-14235492)
chr1 (106-291)||(16114692-16114877)
chr1 (103-289)||(22621681-22621868)
chr1 (103-291)||(26647377-26647564)
chr1 (125-291)||(9782999-9783165)
chr1 (64-289)||(22426537-22426765)
chr1 (100-291)||(15542328-15542519)
chr1 (111-265)||(24282899-24283053)
chr1 (111-291)||(25402455-25402635)
chr1 (103-266)||(15526841-15527004)
chr1 (100-166)||(16786238-16786304)
chr1 (125-291)||(22665697-22665863)
chr1 (100-297)||(22624502-22624699)
chr1 (195-291)||(729117-729213)
chr1 (103-231)||(26101749-26101877)
chr1 (182-297)||(12210233-12210348)
chr1 (100-291)||(18734605-18734796)
chr1 (102-285)||(21450655-21450838)
chr1 (100-163)||(22507522-22507585)
chr1 (103-297)||(28009635-28009829)
chr1 (103-291)||(15158808-15158997)
chr1 (100-266)||(26022281-26022447)
chr1 (64-291)||(16915215-16915446)
chr1 (195-264)||(18098295-18098364)
chr1 (100-291)||(14782416-14782607)
chr1 (101-292)||(16180605-16180795)
chr1 (103-157)||(7881684-7881738)
chr1 (103-216)||(15811540-15811653)
chr1 (102-291)||(18827284-18827473)
chr1 (103-288)||(18832104-18832289)
chr1 (100-289)||(20107741-20107929)
chr1 (207-291)||(21663110-21663194)
chr1 (102-297)||(25959473-25959666)
chr1 (199-290)||(12011205-12011296)
chr1 (190-257)||(16785655-16785721)
chr1 (133-291)||(17444985-17445143)
chr1 (25-83)||(24282786-24282844)
chr1 (100-157)||(21333221-21333278)
chr1 (102-163)||(23035068-23035128)
chr1 (230-291)||(27973319-27973380)
chr1 (15-83)||(16114575-16114643)
chr1 (15-82)||(12011439-12011506)
chr1 (124-167)||(26581483-26581525)
chr1 (16-82)||(15542564-15542630)
chr1 (182-291)||(26652544-26652651)
chr1 (100-158)||(27911951-27912008)
chr1 (15-73)||(44796892-44796950)
chr1 (27-82)||(7881580-7881636)
chr1 (16-84)||(15527049-15527117)
chr1 (15-83)||(15571943-15572011)
chr1 (195-291)||(17365752-17365848)
chr1 (15-83)||(35133659-35133727)
[»] scaffold0043 (2 HSPs)
scaffold0043 (92-291)||(88456-88655)
scaffold0043 (15-83)||(88690-88758)
[»] chr3 (53 HSPs)
chr3 (111-291)||(22246894-22247073)
chr3 (101-291)||(3114729-3114919)
chr3 (132-291)||(22470422-22470581)
chr3 (100-297)||(8145134-8145331)
chr3 (100-291)||(31283923-31284115)
chr3 (133-291)||(13906603-13906761)
chr3 (111-281)||(17134989-17135159)
chr3 (103-291)||(19912468-19912657)
chr3 (100-291)||(8765560-8765751)
chr3 (121-291)||(18535677-18535847)
chr3 (102-291)||(3429244-3429433)
chr3 (79-224)||(18735357-18735501)
chr3 (64-239)||(27073799-27073977)
chr3 (100-291)||(13938866-13939057)
chr3 (101-245)||(8448689-8448833)
chr3 (100-291)||(14977692-14977883)
chr3 (111-291)||(20891665-20891842)
chr3 (182-291)||(8770532-8770641)
chr3 (100-163)||(5509955-5510018)
chr3 (182-290)||(18457132-18457240)
chr3 (100-291)||(20886755-20886945)
chr3 (111-261)||(16223388-16223538)
chr3 (92-166)||(28326279-28326352)
chr3 (103-291)||(2166055-2166243)
chr3 (121-289)||(12372354-12372520)
chr3 (182-291)||(34276457-34276566)
chr3 (196-291)||(52935553-52935645)
chr3 (15-83)||(18735524-18735592)
chr3 (102-238)||(19909102-19909238)
chr3 (15-83)||(20891897-20891965)
chr3 (92-160)||(26092782-26092849)
chr3 (140-291)||(819866-820016)
chr3 (100-163)||(16228492-16228555)
chr3 (111-234)||(19533679-19533802)
chr3 (15-82)||(31284551-31284618)
chr3 (20-82)||(13906838-13906900)
chr3 (100-166)||(19387995-19388061)
chr3 (15-75)||(3114971-3115031)
chr3 (26-82)||(11636229-11636285)
chr3 (15-83)||(22470659-22470727)
chr3 (100-163)||(3002943-3003005)
chr3 (100-239)||(8881473-8881611)
chr3 (209-291)||(12517285-12517367)
chr3 (233-291)||(19387879-19387937)
chr3 (121-163)||(23637519-23637561)
chr3 (209-291)||(25850968-25851050)
chr3 (191-240)||(26092882-26092932)
chr3 (103-160)||(16242342-16242399)
chr3 (182-239)||(27412731-27412788)
chr3 (104-157)||(52936528-52936581)
chr3 (111-291)||(7805640-7805819)
chr3 (15-82)||(19388105-19388172)
chr3 (111-163)||(19573723-19573775)
[»] scaffold0005 (1 HSPs)
scaffold0005 (101-291)||(243851-244040)
[»] scaffold0451 (3 HSPs)
scaffold0451 (102-290)||(10114-10300)
scaffold0451 (182-291)||(5698-5807)
scaffold0451 (17-83)||(10346-10412)
[»] scaffold0386 (2 HSPs)
scaffold0386 (121-291)||(4892-5060)
scaffold0386 (221-290)||(13495-13564)
[»] scaffold0032 (1 HSPs)
scaffold0032 (104-291)||(92848-93035)
[»] scaffold0360 (1 HSPs)
scaffold0360 (133-291)||(16488-16645)
[»] scaffold1017 (1 HSPs)
scaffold1017 (132-233)||(517-618)
[»] scaffold0016 (1 HSPs)
scaffold0016 (100-291)||(4710-4901)
[»] scaffold0072 (1 HSPs)
scaffold0072 (100-290)||(38177-38367)
[»] scaffold0258 (1 HSPs)
scaffold0258 (100-291)||(20272-20462)
[»] scaffold0019 (1 HSPs)
scaffold0019 (100-265)||(182557-182722)
[»] scaffold0056 (1 HSPs)
scaffold0056 (103-290)||(22925-23112)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-78)||(95399-95461)
[»] scaffold0086 (1 HSPs)
scaffold0086 (133-216)||(12011-12094)
[»] scaffold0441 (1 HSPs)
scaffold0441 (92-148)||(2128-2184)
[»] scaffold0062 (1 HSPs)
scaffold0062 (102-166)||(41682-41745)
[»] scaffold0015 (1 HSPs)
scaffold0015 (101-205)||(201938-202042)


Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 14 - 297
Target Start/End: Original strand, 26122182 - 26122465
Alignment:
Q  14 ttcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttcggctgtcattgcattaccgatttgcaagat 113  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26122182 ttcttggaacttgggaacataattccttccttcataaagtcttctgacacctcttgaatcttcattcttcggctgtctttgcattaccgatttgcaagat 26122281  T
Q  114 ttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaat 213  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||| |||||||||||||||||||||||| |||||||    
T  26122282 ttcgtcatgaattacatcaaaaacaccttaaaattgctatgtttcaggaagaacataattacagacacaaatatattaaaaattacaaatgtcccgaaat 26122381  T
Q  214 cattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26122382 catagacaattgctctaatactcctctgttttgctggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 26122465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 103 - 291
Target Start/End: Complemental strand, 17469766 - 17469578
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||| ||||||||| |||||||||||||||||| ||||||||||| |||||  ||  |||||||  ||| |||||||     
T  17469766 atttgcatgatttcttcgtgaattacttcaaaaacatcctaaaattgctatgttttgggaagaacataattacatactcaaatatagaaaacattacaac 17469667  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| ||||||| | |||||| ||||||||||||||||||| |||||||||||| || |||| || | |||||||||||||||||||    
T  17469666 tgttccaaaatcataggcaattgctctaatactcctctgttttgctggtaaaacctgctgaaaatgattgaaaaacatgctaagaataa 17469578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 91 - 297
Target Start/End: Original strand, 18832099 - 18832305
Alignment:
Q  91 attgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatatt 190  Q
    ||||| || |||||||||| |||||| || ||||||||||||| ||||||||| | ||||| | ||| ||||| |   |||||||  ||  |||||||      
T  18832099 attgctttgccgatttgcatgatttcttcgtgaattacatcaagaacaccctatatttgcttttttttgggaaaactctgattacatactcaaatataga 18832198  T
Q  191 aaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    ||| ||||||||||| |||||||||| |||||||| |||||||||||||||||||  |||||||||||| | |||| |||| ||||||||||||| ||||    
T  18832199 aaacattacaaatgtcccgaaatcatagacaattgctctaatactcctctgttttgttggtaaaacctattgaaaaagactgaaaaacatgctaaaaata 18832298  T
Q  291 atttaag 297  Q
    || ||||    
T  18832299 atgtaag 18832305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 291
Target Start/End: Complemental strand, 24162201 - 24162031
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    |||||||||||||||||| |||||||||| ||||||| | ||||||||| ||||| |||  |||||||  ||| ||||||||||||| |||||||| | |    
T  24162201 tgaattacatcaaaaacatcctaaaattgttatgttttgagaagaacataattacagactcaaatatagaaaacattacaaatgttctgaaatcataggc 24162102  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| |||||||||| |||  |||| ||||||||| ||| | |||| |||| |||||||||||||||||||    
T  24162101 aattattctaatacttctccattttgctggtaaaatctattgaaaatgactgaaaaacatgctaagaataa 24162031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 291
Target Start/End: Original strand, 34488764 - 34488934
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| |  |||||  ||  |||||||  ||  | ||||||| | || ||||||||| |    
T  34488764 tgaattacatcaagaacaccctaaaattgctatgtttcaggaagaatacaattacatactcaaatatagaaatcaatacaaatttccctaaatcattggc 34488863  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| |||||||||| |||||||| |||||||| ||||||||||| |||| |||||||||||||||||||    
T  34488864 aattgatctaatactcatctgttttgctggtaaatcctactaaaaatgactgaaaaacatgctaagaataa 34488934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 100 - 297
Target Start/End: Original strand, 29798930 - 29799127
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||| | |||||| || |||||||||||||||| || | | ||||||||||||| |||||||| || |||||  ||  |||||||  ||| ||||     
T  29798930 ccgatttgtatgatttcttcgtgaattacatcaaaaatactccataattgctatgttttgggaagaatataattacaaactcaaatatagaaaacattat 29799029  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    |||||| ||  |||||| |||||||||||| |||||||||| |||| |||||| |||||| |||||| ||||||||||||| ||||||||||| ||||    
T  29799030 aaatgtcccagaatcatagacaattgttcttatactcctctattttgctggtagaacctattaaaaatgactaaaaaacatactaagaataatataag 29799127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 31600286 - 31600095
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaa-caccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||| || | |||||||| ||||| |||||||||||||||||||| |||||| |   |||||||  ||  |||||||  ||| ||||    
T  31600286 ccgatttgcatgatttcttcgtaaattacataaaaaaacaccctaaaattgctatgtt-cgggaaaactctgattacaaactcaaatatagaaaatatta 31600188  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||| |||||||||| |||||||  |||||||||| ||||||||  |||||||||||||  |||| |||| |||||||||||||||||||    
T  31600187 caaatgtcccgaaatcatagacaattactctaatactcttctgttttgttggtaaaacctacggaaaaagacttaaaaacatgctaagaataa 31600095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 19003976 - 19003785
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||| ||||||||||| ||||||||||||| |  |  ||||| |||  |||||||  ||| |||||    
T  19003976 ccgatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgttatgtttcgggaaaactagaattacagactcaaatatagaaaacattac 19003877  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || | |||||||| ||||||||||||||||||| ||  |||| ||| ||||||||||| ||||  ||| |||||||||| ||||||||    
T  19003876 aaaagtcctgaaatcatagacaattgttctaatactcatcctttttgctgctaaaacctactgaaaataactgaaaaacatgccaagaataa 19003785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 121 - 291
Target Start/End: Complemental strand, 24263940 - 24263770
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    ||||||||||||| ||||||||||||||||||||||| || ||||| |  ||||| |||  |||||||  ||| ||||||||||| || ||||||| |      
T  24263940 tgaattacatcaagaacaccctaaaattgctatgttttggaaagaatagaattacagactcaaatatagaaaacattacaaatgtcccaaaatcatagga 24263841  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| | ||||| ||||||| |||  ||||||||||||||||||  |||| |||||||||||||||||||    
T  24263840 aattgatataataatcctctgatttgttggtaaaacctactaaaatagactgaaaaacatgctaagaataa 24263770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 18939407 - 18939597
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| || ||||||||||||| ||||||||||||||||||||||| ||||| |   |||||||  ||   ||||||| ||| | ||||    
T  18939407 cgatttgcatgatttcttcgtgaattacatcaagaacaccctaaaattgctatgttttgggaaaactctgattacatactctaatatataaaacactaca 18939506  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| ||||||||||   |||||  |||||||||| | |||||| |||||||||| |||| || | |||| ||||||||| |||||||||    
T  18939507 aatgtcccgaaatcatatgcaattactctaatactcatatgttttgctggtaaaacttacttaataagactgaaaaacatgttaagaataa 18939597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 121 - 291
Target Start/End: Complemental strand, 22845985 - 22845815
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| |  |||||  ||  |||||||  ||| |||| |||||| |  ||||||| | |    
T  22845985 tgaattacatcaagaacaccctaaaattgctatgttttgggaagaatagaattacaaactcaaatatagaaaacattataaatgtccaaaaatcataggc 22845886  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| ||   ||||| |||||||||||||||||    
T  22845885 aattgatctaatacacctatgttttgctggtaaaacctactataattaactaacaaacatgctaagaataa 22845815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 25920721 - 25920908
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || ||||||||||| ||||||||||  ||||| |||||||||||||||| | ||||||  ||  |||||||  ||   ||||||     
T  25920721 atttgcatgatttcttcgtgaattacatccaaaacaccctggaattgttatgtttcgggaagaata-gattacaaactcaaatatagaaagccttacaat 25920819  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| |||||||||| | |||||| |||||||||| || ||||| |||||||| |||||| |||| ||| |||||| |||||||||||||    
T  25920820 tgtcccgaaatcataggcaattgctctaatactcatccgttttgctggtaaatcctactgaaaatgacaaaaaaatatgctaagaataa 25920908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 26348331 - 26348519
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || ||||||||||||||| ||||||| ||||||||| |||  ||||||| |  |||||  ||  |||||||  ||| ||||||||    
T  26348331 atttgcatgatttcttcgtgaattacatcaaaaccaccctagaattgctatttttttggaagaatagaattacatactcaaatatagaaaacattacaaa 26348430  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||||||||   ||| |||| ||||||||||||||| |  |||||||| |||||  ||| |||| |||||||| ||||||||||    
T  26348431 tgttccgaaatcataagcaaatgttataatactcctctgttctgttggtaaaatctactggaaatgactgaaaaacatactaagaataa 26348519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 291
Target Start/End: Complemental strand, 25400945 - 25400758
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| ||||||||||| |||||  |  |||||||||||||||||||||||| |  |  |||||  ||  |||||||| ||| |||||||    
T  25400945 gatttgcacgatttcttcatgaattacttcaaatcccacctaaaattgctatgtttcgggaaaattagaattacaaactcaaatatataaaacattacaa 25400846  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || |||||||||  |||||| ||||||||| |||||  |||| ||| ||||||||| | |||| |||| |||||||||||||||||||    
T  25400845 aggtcccgaaatca--gacaatcgttctaatattcctcctttttcctgctaaaacctaatgaaaatgactgaaaaacatgctaagaataa 25400758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 26069230 - 26069326
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||||||| ||||||||   |||||||||||||||||||||||| | ||||||||| ||||| |||| |||||||||||||| |||||||||    
T  26069230 attacaaatgttctgaaatcataagcaattgttctaatactcctctgttctgctggtaaaatctactgaaaatgactaaaaaacatgttaagaataa 26069326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 297
Target Start/End: Original strand, 26117356 - 26117520
Alignment:
Q  133 aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaat 232  Q
    ||||||||| ||||||||||||||| ||||||||||  ||||| |||  |||||||  ||| ||||| || || ||||||||||   ||||||||||||     
T  26117356 aaaacacccaaaaattgctatgttttgggaagaacagaattacagactcaaatataaaaaacattactaacgtcccgaaatcataagcaattgttctaaa 26117455  T
Q  233 actcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    |||| ||| || | || ||||||||| || |||| || |||||||||||||||||||||| ||||    
T  26117456 actcatctcttctgcttgtaaaacctgctgaaaatgattaaaaaacatgctaagaataatgtaag 26117520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 100 - 285
Target Start/End: Original strand, 20860225 - 20860410
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||  || |||||||| |||||||| ||||||||||||||||||||| ||| |  |  ||||| |||  |||||||  ||| |||||    
T  20860225 ccgatttgcatgatttattcgtgaattacttcaaaaaccccctaaaattgctatgtttcgagaaaactagaattacagactcaaatatagaaaatattac 20860324  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaa 285  Q
    ||| || || ||||||| | |||||||||||||||| |||  |||| ||| ||||||||||| ||||  | | |||||||||||||    
T  20860325 aaaagtcccaaaatcataggcaattgttctaatacttctcctttttgctgctaaaacctactgaaaattaatgaaaaacatgctaa 20860410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 266
Target Start/End: Original strand, 24261963 - 24262119
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaa-caccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccg 209  Q
    |||||| || |||||||||| ||||| || ||| ||||||||||||||| | |||||||| |||||  ||  |||||||  ||| ||||||||||||| |    
T  24261963 gatttcttcgtgaattacataaaaaaacatccttaaattgctatgtttctgaaagaacataattacaaactcaaatatagaaaacattacaaatgttctg 24262062  T
Q  210 aaatcat-tgacaattgttctaatactcctctgttttactggtaaaacctactaaaaa 266  Q
    |||||||  || ||||| ||||||||||||||||||| || |||||||||||| ||||    
T  24262063 aaatcataggaaaattg-tctaatactcctctgttttgctagtaaaacctactgaaaa 24262119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 29987843 - 29988034
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| || |||| ||| |||||||  ||||||||||| ||||||||||||| |  |  |||||  ||  |||||||  ||| ||||||    
T  29987843 cgatttgcatgatttcttcgtgaagtacttcaaaaaacccctaaaattgttatgtttcgggaaaactagaattacatactaaaatatagaaaacattaca 29987942  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctc-tgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    || || ||||||||||   |||| ||||||||||||| | | |||| ||| ||||| |||||||||| |||| ||||||||||||| |||||    
T  29987943 aaagtcccgaaatcatatgcaatcgttctaatactccaccttttttgctgctaaaatctactaaaaatgactgaaaaacatgctaaaaataa 29988034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 132 - 298
Target Start/End: Original strand, 24188814 - 24188983
Alignment:
Q  132 aaaaacaccctaaaa--ttgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttct 229  Q
    |||||||||||||||  ||| ||||||| |||||||| |  |||| ||||  |||||||  ||| ||||||| |||  |||||||||   |||||| |||    
T  24188814 aaaaacaccctaaaaaattgttatgttttgggaagaatagaattattgactcaaatatagaaaacattacaattgtctcgaaatcatattcaattgctct 24188913  T
Q  230 aatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaagaataatttaagt 298  Q
    ||||||||||| || | ||  |||||||||||||||| || | ||||||||||||||||||||| |||||    
T  24188914 aatactcctctattctccttttaaaacctactaaaaatgagtgaaaaaacatgctaagaataatgtaagt 24188983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 19052989 - 19053178
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || |||||||| |||||| | ||||||||||||||||||| ||||| |  |  ||||| ||   |||||||  ||  |||||||    
T  19052989 gatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgttttgggaaaactagaattacagagtcaaatatagaaatcattacaa 19053088  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || ||||||| || | ||||||||||||||||||||  |||| |||  |||| ||||| ||||  ||| | |||||||||||||||||    
T  19053089 aagtcccgaaattataggcaattgttctaatactcctcctttttgctgtaaaaatctactgaaaataactgataaacatgctaagaataa 19053178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 23387758 - 23387567
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgatt-actgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||| || |||||||  |||||| | || ||||||||||||||||   ||| |||  |||| || |||  |||||||  ||| ||||    
T  23387758 ccgatttgcatgatttcttcgtgaattatttcaaaagccccataaaattgctatgttttaagaa-aactagatttacagactcaaatatagaaaacatta 23387660  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| || | |||||||| | |||| |||||||||||||||  |||| ||| ||||||||||| |||| |||| |||||||||||| ||||||    
T  23387659 caaaagtgctgaaatcataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataa 23387567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 24320733 - 24320541
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||||||||||||||| ||||||||||||| |  |  || || |||  |||||||  ||||||| |    
T  24320733 ccgatttgcatgatttcttcgtgaattacttcaaaaacaccctaaaattgatatgtttcgggaaaactagaatgacagactcaaatatagaaaaaatttc 24320634  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaagaataa 291  Q
    | | || |||||||| | |  ||| || |||||||||| |  |||| ||| ||||||||||| |||| || | |||||||||| |||||||||    
T  24320633 agaagtcccgaaatcgtaggaaatcgtgctaatactccgcctttttgctgctaaaacctactgaaaatgaataaaaaaacatgttaagaataa 24320541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 258
Target Start/End: Complemental strand, 24849771 - 24849620
Alignment:
Q  106 tgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgt 205  Q
    |||| |||||| |||||||||||||||| || | ||||||||| ||||||||| |||||||||  ||||| |||  |||||||  ||| |||| ||||||    
T  24849771 tgcatgatttcttcatgaattacatcaataa-atcctaaaatttctatgtttccggaagaacaaaattacagactcaaatatagaaaatattaaaaatgt 24849673  T
Q  206 tccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacct 258  Q
    |||||||  |||  |||||| || | |||| |||| |||| ||||||||||||    
T  24849672 tccgaaagtatttgcaattgctccattacttctctattttgctggtaaaacct 24849620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 24142293 - 24142484
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||||| || |||||| || |||||||  |||||| | ||||||||||||||||||||||||| |  |  ||||| |||  |||||||  |||  ||||    
T  24142293 ccgatttccatgatttcttcgtgaattatttcaaaacccccctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaactttac 24142392  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||| |  |||  ||||||||||||||| ||||  || ||||  |||||||||   ||| |||||||||||||||||||    
T  24142393 aaaagtaccgaaatcataggaaatctttctaatactcctcttttttgatgctaaattctactaaaataaactgaaaaacatgctaagaataa 24142484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 266
Target Start/End: Complemental strand, 24513395 - 24513231
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || |||||||| |||||||| ||||||||||| ||||||||||||| |  |  |||||  |   |||||||| ||| |||||||    
T  24513395 gatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgatatgtttcgggaaaactagaattacaaattcaaatatataaaacattacaa 24513296  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaa 266  Q
    |||| || ||||||| | ||| |  |||||||||||||| |||| ||| | ||| ||||| ||||    
T  24513295 atgtcccaaaatcataggcaaattctctaatactcctcttttttgctgctgaaatctactgaaaa 24513231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 15520848 - 15520919
Alignment:
Q  87 tgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttc 158  Q
    |||| |||| || |||||||||| |||||| || |||||||||||||||||||| |||||||||||| ||||    
T  15520848 tgtctttgctttgccgatttgcatgatttcttcttgaattacatcaaaaacaccataaaattgctatatttc 15520919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 20548663 - 20548525
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| ||||||  | |||||||| |||||||  |||| ||| |||||||||||||||| |  |  ||||| |||| |||||||  |||||||||    
T  20548663 ccgatttgcatgatttctccgtgaattacttcaaaaaacccctcaaactgctatgtttcgggaaaactagaattacagacacaaatata-gaaaaattac 20548565  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    ||| || |||||||||  | |||| |||||||||||||||    
T  20548564 aaaagtcccgaaatcacaggcaatcgttctaatactcctc 20548525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 28666378 - 28666569
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| |  |||||||| | ||||||  |||||||||| ||||||||||||| |  |  ||||| |||  |||||||  ||| |||||    
T  28666378 ccgatttgcaggatttctttgtgaattactttaaaaacctcctaaaattgatatgtttcgggaaaactaaaattacagactcaaatataaaaaacattac 28666477  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || || ||||||| | || |  |||||||||| |||  |||| ||| ||||||||||| |||| || | ||||||||| |||||||||    
T  28666478 aaaagtcccaaaatcataggcagtcattctaatacttctcctttttgctgctaaaacctactgaaaatgaatgaaaaacatgataagaataa 28666569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 240
Target Start/End: Original strand, 18227500 - 18227636
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || ||||||||||| ||| || ||||||||||||| |||| ||||||||||  ||||| ||   |||||||  ||| |||||||    
T  18227500 gatttgcatgatttcttcgtgaattacatctaaa-catcctaaaattgctaggttttgggaagaacagaattacagagtcaaatataaaaaacattacaa 18227598  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctct 240  Q
    || |||||||||| |   |||||| ||||||||||||||    
T  18227599 attttccgaaatc-taagcaattgctctaatactcctct 18227636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 34131973 - 34132163
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||| | |||||| || |||||||| |||||||  ||||||||||||||||||||| ||| |  |  ||||| |||  | | |||  ||| ||||||    
T  34131973 cgatttgtatgatttcttcgtgaattacttcaaaaaacccctaaaattgctatgtttcgtgaaaactagaattacagactcagacatagaaaatattaca 34132072  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    || || |||||||||| | || | ||||||||||| |||  |||| ||| ||||||||| | ||||   || |||||||||||||||||||    
T  34132073 aaagtcccgaaatcataggcagtcgttctaatacttctcctttttgctgctaaaacctaatgaaaatagctgaaaaacatgctaagaataa 34132163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 23110280 - 23110216
Alignment:
Q  227 tctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||||||||||||| ||| ||||||||||  | || |||||||||||||| |||||||||    
T  23110280 tctaatactcctctgttttgctgttaaaacctaccgataatgactaaaaaacatgttaagaataa 23110216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 16522168 - 16522051
Alignment:
Q  50 aagtcttctgacacctcttgaatcttca---ttcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccct-aaa 145  Q
    ||||||| |||  |||||||||||||||   |||||||| |||  |||  || |||||||||| |||||| ||||||||||| |||||| | ||||  ||    
T  16522168 aagtcttttgaggcctcttgaatcttcacaattcttcggttgttcttgattttccgatttgcatgatttcttcatgaattacttcaaaacccccctccaa 16522069  T
Q  146 attgctatgtttcgggaa 163  Q
    ||||||||||||||||||    
T  16522068 attgctatgtttcgggaa 16522051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 17469870 - 17469816
Alignment:
Q  25 tgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcatt 79  Q
    |||||||||||||||| |||| |||||||||| |||  |||||||||||||||||    
T  17469870 tgggaacataattcctccctttgtaaagtcttatgaggcctcttgaatcttcatt 17469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 25572774 - 25572716
Alignment:
Q  25 tgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||||||||||||||| |||| |||| |||||| || ||||||||||||||| ||||||    
T  25572774 tgggaacataattcctccctttgtaatgtcttccgagacctcttgaatcttccttcttc 25572716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 84
Target Start/End: Original strand, 18831997 - 18832066
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttcg 84  Q
    ||||||||| ||  |||||||||||| ||| ||||| |||||||||  ||||||||||||||| ||||||    
T  18831997 tcttggaacttgataacataattcctccctccgtaacgtcttctgaggcctcttgaatcttcaatcttcg 18832066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 26253355 - 26253411
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgttt 157  Q
    |||||||||| |||||  || ||||||||||||||| |||||||||||||||||||||    
T  26253355 ccgatttgcatgattttttcgtgaattacatcaaaa-caccctaaaattgctatgttt 26253411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 32416041 - 32415992
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattg 149  Q
    |||||||||| ||||| | | |||||||||||||||||||||||||||||    
T  32416041 ccgatttgcatgattttgccttgaattacatcaaaaacaccctaaaattg 32415992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 24265601 - 24265533
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| || ||||| ||||||| |||| ||||||||||||||  ||| |||| ||||||||||||    
T  24265601 tcttggaacttgtgaacaaaattcctccctttgtaaagtcttctgaggccttttgattcttcattcttc 24265533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 24342232 - 24342164
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| || ||||| ||||||| |||| ||||||||||||||  ||| |||| ||||||||||||    
T  24342232 tcttggaacttgtgaacaaaattcctccctttgtaaagtcttctgaggccttttgattcttcattcttc 24342164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 19761792 - 19761726
Alignment:
Q  99 accgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||| |||| |||||| || ||||||||| ||||| || |||||||||||||||||| ||||||||    
T  19761792 accgatatgcatgatttcttcgtgaattacaacaaaa-catcctaaaattgctatgttttgggaagaa 19761726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 24658510 - 24658448
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| ||||||||||| || ||||| ||||||||||| | |||||||||||    
T  24658510 ccgatttgcatgatttcttcatgaattacttc-aaaactccctaaaattgttgtgtttcgggaa 24658448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 24658618 - 24658555
Alignment:
Q  19 ggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    ||||| ||| ||||||||||||||||  |||||||||  |||  ||||||||||||||||||||    
T  24658618 ggaacttggaaacataattccttcctatgtaaagtctcttgaggcctcttgaatcttcattctt 24658555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 26314997 - 26315064
Alignment:
Q  16 cttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||||||| | |||||| |||| || |||| |||||||||| |||  |||||||||||||||||||||    
T  26314997 cttggaacttaggaacaaaatttctccctttgtaaagtcttatgaggcctcttgaatcttcattcttc 26315064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 19761900 - 19761834
Alignment:
Q  17 ttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||| |||||||||||||||| |||  |||| |||||||||  |||||||||| ||| ||||||    
T  19761900 ttggaacttgggaacataattcctccctctgtaacgtcttctgaggcctcttgaatattctttcttc 19761834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 15691305 - 15691345
Alignment:
Q  251 taaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||||| |||| |||||||||| |||||||||||||    
T  15691305 taaaacctactgaaaatgactaaaaaatatgctaagaataa 15691345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 101 - 291
Target Start/End: Complemental strand, 22564759 - 22564569
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| || ||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||| |||  |||||||  ||| ||||||    
T  22564759 cgatttgcatgatttcttcgtgaattacatcaacaacaccctaaaattgctatgtttcgagaagaacagaattacagactcaaatatagaaaacattaca 22564660  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| |||||||||  | |||||| ||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  22564659 aatgtcccgaaatcacaggcaattgctctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataa 22564569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 102 - 291
Target Start/End: Complemental strand, 23644526 - 23644337
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || |||||||||||||||||| |||||| |||||||||||  |||||||||  | ||| |||  |||||||  ||| |||||||    
T  23644526 gatttgcatgatttcttcgtgaattacatcaaaaacatcctaaatttgctatgttttaggaagaacagaaatacagactcaaatatagaaaacattacaa 23644427  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| |||||||||| | |||||| |||||||||||| |||||| ||||||||||||||||||||| | | |||||||||||||||||||    
T  23644426 atgtcccgaaatcataggcaattgatctaatactcctatgttttgctggtaaaacctactaaaaacaattgaaaaacatgctaagaataa 23644337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 277
Target Start/End: Complemental strand, 9507470 - 9507304
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||||||||||||||||| ||||||||||| ||||||| || |  |||||  ||  |||||||  ||| ||||||||||| ||||    
T  9507470 gatttcttcgtgaattacatcaaaaacaccctataattgctatgtctcgggaataatagaattacatactcaaatatagaaaatattacaaatgtcccga 9507371  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaa 277  Q
    ||||||   |||||||||||||||||| ||||| ||||||||||||||||| |||| |||| |||||    
T  9507370 aatcataagcaattgttctaatactcccctgttctactggtaaaacctactgaaaatgactgaaaaa 9507304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 291
Target Start/End: Original strand, 8246537 - 8246689
Alignment:
Q  138 accctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcc 237  Q
    ||||||||||||||||||||||||||||| || ||||| |||  |||||||  ||| | || |||||| || ||||||| |||||||| |||||||||||    
T  8246537 accctaaaattgctatgtttcgggaagaatataattacagactcaaatatagaaaacaataaaaatgtcccaaaatcatagacaattgatctaatactcc 8246636  T
Q  238 tctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | ||||||  ||||||||||||||||||| |||| ||||| |||||||||||||    
T  8246637 tatgtttttatggtaaaacctactaaaaatgactgaaaaa-atgctaagaataa 8246689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 102 - 288
Target Start/End: Complemental strand, 9898076 - 9897891
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||| | |||||| || ||||||||||||| ||||||||||||||||||||||||  |||||| |  ||||| |||  |||||||  ||| | |||||    
T  9898076 gatttgtatgatttcttcgtgaattacatcaagaacaccctaaaattgctatgtttcaagaagaatacaattacagactcaaatatagaaaacaatacaa 9897977  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaa 288  Q
    |||||||||||||||    ||||| ||||| |||||||||||||  |||||||| ||||| |||| ||||||||| |||||||||||    
T  9897976 atgttccgaaatcataagtaattgatctaacactcctctgttttgttggtaaaa-ctactgaaaatgactaaaaatcatgctaagaa 9897891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 285
Target Start/End: Original strand, 2588193 - 2588367
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||||||||||||||| | |||||| |||||| |||||||| |  ||||| |||  |||||||  ||| |||||||||||  |||    
T  2588193 gatttcttcgtgaattacatcaaaaacacccaagaattgccatgttttgggaagaatagaattacagactcaaatatagaaaacattacaaatgtcacga 2588292  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaa 285  Q
    |||||| ||||||||||||||||||| ||| || |  |||||||||| | | |||| |||| ||||| |||||||    
T  2588293 aatcatagacaattgttctaatactcatcttttatgttggtaaaaccaattgaaaatgactgaaaaatatgctaa 2588367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 24469686 - 24469875
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    ||||| || |||||| || |||||||| |||||||| ||||||||||| ||||||||||||| |  || ||||| |||  | |||||  ||| |||||||    
T  24469686 gattttcatgatttcttcgtgaattacttcaaaaactccctaaaattgttatgtttcgggaaaactataattacagactcatatatagaaaatattacaa 24469785  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || |||||||||| | |||| |||||||||||||||  |||| |||  |||||||||| |||| || | |||||||| |||| |||||    
T  24469786 aagtcccgaaatcataggcaatcgttctaatactcctcctttttgctgtcaaaacctactgaaaatgattgaaaaacatactaaaaataa 24469875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 13216516 - 13216324
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| |   |||||||||||||||||||||| |||||||| ||||| ||||||| |  |||||  ||  |||||||  ||| ||||     
T  13216516 ccgatttgcatgatttctttgcgaattacatcaaaaacaccctagaattgctaagtttcaggaagaatagaattacaaacgcaaatataaaaaacattat 13216417  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaagaataa 291  Q
     |||||| |||||| ||   ||| |||||||||||||||||  |||  ||| |||||||| |||||| |||| ||||||||||||||||||||    
T  13216416 caatgtttcgaaattataagcaaatgttctaatactcctctactttgatggcaaaacctattaaaaatgactgaaaaaacatgctaagaataa 13216324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 1636521 - 1636710
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatga-ttactgacagaaatatattaaaaattac 199  Q
    ||||||||| |||||| || |||||||| |||||||| ||||||||||||||||||||||||| |||  || |||  |||  ||||||   ||| |||||    
T  1636521 cgatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaa-aactagagttatagactcaaatatggaaaacattac 1636619  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| | || |||| || | |||||||||||||||| |||  |||| | | ||||||||||||||||  ||| |||||||||||||||||||    
T  1636620 aaatatcccaaaattataggcaattgttctaatact-ctcctttttgccgctaaaacctactaaaaataactgaaaaacatgctaagaataa 1636710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 291
Target Start/End: Complemental strand, 21687243 - 21687149
Alignment:
Q  197 tacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||| || ||||| | |||||||| |||| ||||| |||||||| |||||||||||||||||||  |||| |||||||||||||||||||    
T  21687243 tacaaatgtcccaaaatcctcgacaattgatctattactcttctgttttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataa 21687149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 291
Target Start/End: Original strand, 14641560 - 14641709
Alignment:
Q  142 taaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctg 241  Q
    |||||||||||||||||| ||| | ||  ||||| |||  || ||||  ||| |||||||| ||||| ||||||| |  |||||||||||||||||||      
T  14641560 taaaattgctatgtttcgagaaaaccagaattacagactcaattatagaaaacattacaaaagttccaaaatcataggtaattgttctaatactcctcct 14641659  T
Q  242 ttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| ||| ||||||||||| ||||  ||| |||||||||||||||||||    
T  14641660 ttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataa 14641709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 291
Target Start/End: Complemental strand, 22404462 - 22404274
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| ||||||||||| | |||||| ||||||||||| |||||||| |||| | ||  |||||  ||   ||||||  ||| |||||||    
T  22404462 gatttgcatgatttcttcatgaattactt-aaaaaccccctaaaattggtatgtttcaggaaaaccagaattacatactcgaatatagaaaacattacaa 22404364  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || |||||||||| |||||| ||| |||||||||||  |||| ||| ||||||||||| |||   ||| ||||||||| |||||||||    
T  22404363 aagtcccgaaatcatagacaatcgttttaatactcctcctttttgctgctaaaacctactgaaatttactgaaaaacatgataagaataa 22404274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 24479912 - 24480101
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||  || |||||||| |||||||| ||||||||||| ||||||||| ||| |  || ||||| |||  | |||||  ||| |||||||    
T  24479912 gatttgcatgattttttcgtgaattacttcaaaaaccccctaaaattgttatgtttcgagaaaactataattacagactcacatatagaaaacattacaa 24480011  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |  | |||||||||| |||||| |||| ||||||||||  |||| |||  |||||||||| |||| || | ||| |||||||||||||||    
T  24480012 aattcccgaaatcatagacaatcgttccaatactcctcctttttgctgccaaaacctactgaaaatgattgaaatacatgctaagaataa 24480101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 140 - 291
Target Start/End: Complemental strand, 6629146 - 6628994
Alignment:
Q  140 cctaaaattgctatgtttc-gggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcct 238  Q
    ||||||||| ||||||||  |||||||| |  ||||| |||  |||||||  ||| ||||||||| | | |||| ||||| |||||| ||||||||| ||    
T  6629146 cctaaaatttctatgtttttgggaagaatagaattacagactcaaatatagaaaacattacaaatatcctgaaaccattggcaattgatctaatactact 6629047  T
Q  239 ctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| ||| |||||||||||||||||||  | |||||| |||||||||||||||    
T  6629046 ctggtttgctggtaaaacctactaaaatagtctaaaagacatgctaagaataa 6628994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 15600622 - 15600428
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    ||||||||  ||||| || ||||||||||||||||||||||||||||||||||| | |||||||| || |||||       ||||||  ||| | || ||    
T  15600622 gatttgcataatttcttcgtgaattacatcaaaaacaccctaaaattgctatgtattgggaagaaaataattacaagttcgaatata-aaaagagtataa 15600524  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||||  |||||| || |  ||||| |||||||||||| |||||| ||| ||||||| |||| |||||||| |||||||| ||| ||||||| ||||    
T  15600523 atgtatcgaaattataggaaattgatctaatactcctgtgttttgctgctaaaacccactacaaacgactgaaaaacatactacgaataatgtaag 15600428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 287
Target Start/End: Complemental strand, 19594188 - 19593999
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | ||||||||||| ||||||||||||| |  |  ||||| |||  |||||||  ||| |||||    
T  19594188 ccgatttgcatgatttcttcgtgaattacttcaaaacctccctaaaattgttatgtttcgggaaaactagaattacagactcaaatatagaaaacattac 19594089  T
Q  200 aaatgttccg--aaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    ||| | ||||  ||||||| | ||||||||||||||||||||  |||| | | ||||||||||| ||||  ||| ||||||||||||||||    
T  19594088 aaaag-tccgtaaaatcataggcaattgttctaatactcctcctttttgcagctaaaacctactgaaaataactaaaaaaacatgctaaga 19593999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 101 - 266
Target Start/End: Original strand, 8066539 - 8066704
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatga-ttactgacagaaatatattaaaaattac 199  Q
    ||||||||| |||||| || |||||||| |||||| | || ||||||| ||||||||| |||| ||| ||| |||| |||  |||||||  ||| |||||    
T  8066539 cgatttgcatgatttcttcttgaattacttcaaaacccccgtaaaattactatgtttcaggaa-aacttgaattacagactcaaatatagaaaatattac 8066637  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaa 266  Q
    ||| ||||||||||||| ||||||| ||||||||||| ||  |||| ||| ||||| ||||| ||||    
T  8066638 aaaagttccgaaatcatagacaattattctaatactcttcctttttgctgctaaaatctactgaaaa 8066704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 19246164 - 19246353
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| |||| |||||| |||  ||||||||||||| || |||||| | ||||||    ||||| |||  |||||||  ||| | |||||    
T  19246164 gatttgcttgatttcttcattaattacctcatgaacaccctaaaatagccatgttttgagaagaatcaaattacagactcaaatatagaaaataatacaa 19246263  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| || |||||||   |||||| |||||||||| ||| |||| ||| |||||||||||||||  |||| ||||||||||| |||||||    
T  19246264 atgtcccaaaatcataagcaattgatctaatactcatctattttgctgttaaaacctactaaaatagactgaaaaacatgcttagaataa 19246353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 14076285 - 14076473
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||| ||||||||  |||||||||||||||||||||||| || |  ||||  |||  |||||||  ||| ||||||||    
T  14076285 atttgcatgatttcttcgtgaattacttcaaaaactacctaaaattgctatgtttcgggaaaaatagaattagggactcaaatatagaaaacattacaaa 14076384  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     || | |||||||| | |||||  |||||||||||||   ||| ||| |||| | |||| ||||  ||| |||| ||||||||||||||    
T  14076385 agtcctgaaatcataggcaatttctctaatactcctcctctttgctgctaaatcatactgaaaataactgaaaaccatgctaagaataa 14076473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 8038282 - 8038196
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaaga 165  Q
    ||||||| |||  |||| || |||||||||| |||||| || | |||||| |||||||||||||||||||||||||||| |||||||    
T  8038282 tcttcggatgtttttgctttgccgatttgcatgatttcttcgtaaattacttcaaaaacaccctaaaattgctatgttttgggaaga 8038196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Original strand, 27961100 - 27961165
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||||||| |||||| || ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  27961100 ccgatttgcatgatttcttcgtgaattacatcaaaa-caccctagaattgctatgtttcgggaagaa 27961165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 9339186 - 9339054
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||| | |||||| ||||||||||||||||||  ||||||||||||||||||||||| ||||| |  |||||  ||  |||||||  ||| |||||||    
T  9339186 gatttgaatgatttcttcatgaattacatcaaaat-accctaaaattgctatgtttcggaaagaatagaattacaaactcaaatatagaaaacattacaa 9339088  T
Q  202 atgttccgaaatcattgacaattgttctaatact 235  Q
    |||| || |||||||   |||||| |||||||||    
T  9339087 atgtccccaaatcataagcaattgctctaatact 9339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 3358029 - 3358168
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| ||| ||||||| |||||| |||| ||| ||||||||||||||| ||||| || ||||| |||  |||||||  ||| ||| |    
T  3358029 ccgatttgcatgatttcttcacgaattacgtcaaaa-caccataatattgctatgtttcggaaagaaaataattacagactcaaatatagaaaacatttc 3358127  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctct 240  Q
    |||||| ||  ||||||  ||||||  ||||||||||||||    
T  3358128 aaatgtcccataatcataaacaattactctaatactcctct 3358168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 17847761 - 17847857
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||| | || ||||||| |||||| |||||||||||| ||  |||| ||| |||||| |||| ||||  |||||||||||||||||||||||    
T  17847761 attacaaatatcccaaaatcatagacaatcgttctaatactcttcatttttgctgctaaaacttacttaaaataactaaaaaacatgctaagaataa 17847857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 284
Target Start/End: Complemental strand, 21079931 - 21079748
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || ||||||||||||||| |||| ||||||| |||||| |||| || || |  ||||| |||  |||||||  ||| ||| |    
T  21079931 ccgatttgcatgatttcttcttgaattacatcaaaa-caccataaaatttctatgtatcggaaataatagaattacagactcaaatatagaaaacattgc 21079833  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgcta 284  Q
    |||||| |  |||||||   |||||| |||||||||||||| ||||  |  |||||||||||||||| |  | ||||||||||||    
T  21079832 aaatgtccaaaaatcatatgcaattgatctaatactcctctattttggttttaaaacctactaaaaatggttgaaaaacatgcta 21079748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 30356149 - 30356340
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattac-tgacagaaatatattaaaaatta 198  Q
    |||||||||| ||||||  | ||||||||||||||| || |||| ||||| ||||||||||||| || |  ||||| ||||  | |||||| ||| ||||    
T  30356149 ccgatttgcatgatttctccgtgaattacatcaaaa-catcctagaattgatatgtttcgggaataatagaattacatgactcatatatataaaacatta 30356247  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     |||||| ||||||||||   |||||| ||||  |||||||| || |    |||||||||| | |||| |||||||||||||| |||||||||    
T  30356248 taaatgtcccgaaatcataagcaattgctctatcactcctctattcttgatgtaaaacctaatgaaaatgactaaaaaacatgttaagaataa 30356340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 297
Target Start/End: Original strand, 21932403 - 21932558
Alignment:
Q  143 aaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgt 242  Q
    |||||||||||||||||||||||  |  ||||| |||  |||||||  ||| ||||||||||| |  ||||||| |||||||  |||||||||||||  |    
T  21932403 aaaattgctatgtttcgggaagactagaattacagactcaaatatagaaaacattacaaatgtcctaaaatcatagacaatttctctaatactcctcctt 21932502  T
Q  243 tttactggtaaaacctac-taaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||| ||  ||||||| || | |||| |  ||||||||||||||||||||| |||||    
T  21932503 tttgctattaaaacccacatgaaaatgtttaaaaaacatgctaagaataacttaag 21932558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 6629286 - 6629228
Alignment:
Q  25 tgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||||| ||||||||| |||| ||||||||||||||  |||||||||||||||||||||    
T  6629286 tgggaatataattcctccctttgtaaagtcttctgaggcctcttgaatcttcattcttc 6629228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 291
Target Start/End: Original strand, 9840903 - 9841096
Alignment:
Q  91 attgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatatt 190  Q
    ||||| || |||||||||  |||||| || |||||||| | |||||||||||||||||||||||||| |||||||  |  ||||  ||   |||||||      
T  9840903 attgctttgccgatttgcttgatttcttcgtgaattactttaaaaacaccctaaaattgctatgttttgggaagactagaattatagagtcaaatataga 9841002  T
Q  191 aaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    ||| ||||||||| | | |||||       ||| | |||||||||||||  || | ||||||||||||||| |||| |||||||| ||||| ||||||||    
T  9841003 aaatattacaaatatcctgaaat-------aatagctctaatactcctcctttctgctggtaaaacctactgaaaatgactaaaacacatgttaagaata 9841095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 286
Target Start/End: Complemental strand, 19577747 - 19577562
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| |  |||||||| |||||  | ||||||||||| ||||| ||||||| |  |  ||||| |||  |||||||  |||  ||||    
T  19577747 ccgatttgcatgatttctttgtgaattacttcaaac-ctccctaaaattgttatgtgtcgggaaaactagaattacagactcaaatatagaaaaccttac 19577649  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaag 286  Q
    ||| || |  ||||||| | |||| |||||||||||||||  |||| ||| ||||||||||| ||||  ||||||||||||||||||    
T  19577648 aaaagtccaaaaatcataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaataactaaaaaacatgctaag 19577562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 21760621 - 21760559
Alignment:
Q  97 ttaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcg 159  Q
    ||||||||||||| |||||| || |||||||| |||||| | |||||||||||||||||||||    
T  21760621 ttaccgatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcg 21760559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 9519620 - 9519809
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| ||||||  | |||||||  |||||||||||||||||||||  | ||||||||| |  |  ||||| |||  |||||||  | | |||||||    
T  9519620 gatttgcatgatttctccgtgaattatttcaaaaacaccctaaaattgcgttatttcgggaaaactagaattacagactcaaatatagaacacattacaa 9519719  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | |  || ||||||| | |||||| |||||||||||||  |||| ||| ||||  ||||| ||||  ||||||||||||||||| |||||    
T  9519720 aagccccaaaatcataggcaattgctctaatactcctcctttttgctgctaaatactactgaaaataactaaaaaacatgctaaaaataa 9519809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 14723573 - 14723761
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || |||||||| |||||||| |||||||||||||||||||| | || |  |  ||||| |||  |||||||  ||| |||||||    
T  14723573 gatttgcatgatttcttcgtgaattacttcaaaaac-ccctaaaattgctatgtttcagaaaaactagaattacagactcaaatatagaaaacattacaa 14723671  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || ||||  |||| ||||||  ||||||||||||||  |||| ||  |||| |||| | ||||  ||| |||| ||||||||||||||    
T  14723672 aagtcccgatgtcatagacaatcattctaatactcctcctttttgctcctaaatcctattgaaaataactgaaaagcatgctaagaataa 14723761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 17822236 - 17822043
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccct-aaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||| || |||||||| |||||||| |  | |||| ||||||||||||||||||  |  |||||  ||  |||| ||  ||| ||||    
T  17822236 ccgatttgcatgatttcttcgtgaattacttcaaaaaccctattaaaactgctatgtttcgggaagactagaattacatactcaaatttagaaaacatta 17822137  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgacta-aaaaacatgctaagaataa 291  Q
    |||| || || ||||||| | |||| |||||||||||||||  |||| ||| |||| |||| | ||||  |||| |||||||||||||||||||    
T  17822136 caaaagtcccaaaatcataggcaatcgttctaatactcctcctttttgctgctaaatcctattgaaaataactagaaaaacatgctaagaataa 17822043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 245
Target Start/End: Original strand, 20080623 - 20080767
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||||| || |||||| |  ||||||||||||| || ||||||||||| ||||||||||||||||| |  ||||| |||  |||||||  | | | ||     
T  20080623 ccgatttacatgatttctttgtgaattacatcaagaagaccctaaaatttctatgtttcgggaagaatagaattacagactcaaatataaaatacaatat 20080722  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgtttt 245  Q
    ||||| ||| | ||||| | |||||| |||||||||||||||||||    
T  20080723 aaatg-tcccatatcataggcaattgatctaatactcctctgtttt 20080767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 21152620 - 21152511
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| || |||||||||| |||||| |||||||||||||||  |||| ||| | || |||||||||||  | | |||||||||    
T  21152620 aaatatagaaaacattacaaaagtgccgaaatcatagacaatcgttctaatactcctcctttttgctgcttaatcctactaaaaataattgaaaaacatg 21152521  T
Q  282 ctaagaataa 291  Q
    |||| |||||    
T  21152520 ctaaaaataa 21152511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 23644641 - 23644572
Alignment:
Q  14 ttcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||||||||| |||||||| ||||||| ||||| ||||||||| |||  |||||||||||||| ||||||    
T  23644641 ttcttggaacttgggaacagaattcctaccttcttaaagtcttatgatgcctcttgaatcttccttcttc 23644572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 14078005 - 14078121
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctact-aaaaacgactaaaaaacat 280  Q
    |||||||  ||| |||||||| || |||||||||| | |||||| |||||||||||||   ||| ||| |||| |||||| |||||  |||||||| |||    
T  14078005 aaatataaaaaacattacaaaagtcccgaaatcataggcaattgctctaatactcctcctctttgctgctaaatcctactgaaaaataactaaaaaccat 14078104  T
Q  281 gctaagaataatttaag 297  Q
    |||||||||||| ||||    
T  14078105 gctaagaataatgtaag 14078121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 15585978 - 15586041
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| |  |||||||| ||||||||  ||||||||||||||||||||||||    
T  15585978 ccgatttgcatgatttctttgtgaattacttcaaaaacctcctaaaattgctatgtttcgggaa 15586041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 18171463 - 18171325
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| |||||||||| || |||| | |||| |||||||| ||||||||||| |  |  ||||| |||  |||||||  ||| |||||    
T  18171463 ccgatttgcatgatttcttcatgaatta-attaaaacccccctcaaattgctttgtttcgggaaaactacaattacagactcaaatatagaaaacattac 18171365  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    ||| || |||||||||| | ||||  ||||||||||||||    
T  18171364 aaaagtcccgaaatcataggcaatcattctaatactcctc 18171325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 10822012 - 10822077
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattc 80  Q
    |||||| || ||||||||||||||||||||| |||| ||||| |||  ||| ||||||||||||||    
T  10822012 tcttgggacttgggaacataattccttcctttgtaatgtcttttgaggccttttgaatcttcattc 10822077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 8246401 - 8246469
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| |||||||||||||  | |||  ||||||||||| ||  |||||||||||||||||||||    
T  8246401 tcttggaacttgggaacataatttgtccctctgtaaagtcttccgaggcctcttgaatcttcattcttc 8246469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 291
Target Start/End: Original strand, 9848040 - 9848240
Alignment:
Q  91 attgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatatt 190  Q
    ||||| || ||||| |||| |||||  || |||||||| ||||||| |  ||||||||||||||||| | ||||| ||  ||||  ||   |||||||      
T  9848040 attgctttgccgatatgcatgattttttcgtgaattacttcaaaaagattctaaaattgctatgttttgagaagaccagaattatagattcaaatataga 9848139  T
Q  191 aaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    ||| ||||||||  | |  ||||||| |  ||||| |||||||||| ||  |||| ||  |||||||||||||||| |||| ||||||||| ||||||||    
T  9848140 aaacattacaaacatcctaaaatcataggaaattgctctaatactcatcctttttgctaataaaacctactaaaaatgactgaaaaacatgttaagaata 9848239  T
Q  291 a 291  Q
    |    
T  9848240 a 9848240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 9898190 - 9898122
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| || ||| | |||||||||||| ||||| ||||||||  ||||||||||||| |||||||    
T  9898190 tcttggaacttgagaataaaattccttcctttgtaaattcttctgaggcctcttgaatctttattcttc 9898122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 245
Target Start/End: Complemental strand, 24389357 - 24389213
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    |||||| || |||||| | |||||||||||||| || ||||||||||| ||||||||   |||||| |  ||||  ||   |||||||  ||| | || |    
T  24389357 cgatttacatgatttctttatgaattacatcaagaagaccctaaaatttctatgttttcagaagaatagaattagagagtcaaatatagaaaacaatata 24389258  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgtttt 245  Q
    ||||| |||||||||| | |||||  |||||||||||||||||||    
T  24389257 aatgtcccgaaatcataggcaattaatctaatactcctctgtttt 24389213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 163
Target Start/End: Original strand, 32759850 - 32759917
Alignment:
Q  95 cattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||| |||||||||| |||||| || ||||||||||| |||||| |||| ||||||||||||| |||||    
T  32759850 cattgccgatttgcatgatttcttcgtgaattacatc-aaaacatcctagaattgctatgttttgggaa 32759917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 22411615 - 22411552
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| || |||||||| ||||||||  ||| |||||||||||||| |||||    
T  22411615 ccgatttgcatgatttcttcgtgaattacttcaaaaacctcctcaaattgctatgttttgggaa 22411552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 14727141 - 14727211
Alignment:
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| ||||||||||||| |||| | | | |||||||||||||||| |||| ||||||||| ||| |||||    
T  14727141 aattattctaatactcctatgttctgcagataaaacctactaaaaatgactgaaaaacatggtaataataa 14727211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 32759744 - 32759806
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttca 77  Q
    |||||| ||||||||||| ||||||| |||| |||| |||||| ||  |||||||||||||||    
T  32759744 tcttgggacctgggaacaaaattcctccctttgtaacgtcttccgaggcctcttgaatcttca 32759806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 297
Target Start/End: Original strand, 17384038 - 17384106
Alignment:
Q  229 taatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    |||||||||||  |||| ||| ||||||||| | ||||  ||| |||||||||||||||||||| ||||    
T  17384038 taatactcctcctttttgctgctaaaacctaatgaaaataactgaaaaacatgctaagaataatgtaag 17384106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 296
Target Start/End: Complemental strand, 19721936 - 19721861
Alignment:
Q  220 caattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaa 296  Q
    |||||| |||||||||||||| || | || |||||||||||| |||  |||| ||||||||  ||||||||||||||    
T  19721936 caattgatctaatactcctctattctgcttgtaaaacctactgaaattgact-aaaaacattttaagaataatttaa 19721861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 23087285 - 23087253
Alignment:
Q  134 aaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||||||||||| ||||||||||||||||||    
T  23087285 aaacaccctaaaatagctatgtttcgggaagaa 23087253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 5e-50; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 79 - 287
Target Start/End: Original strand, 10418423 - 10418630
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactga 178  Q
    ||||||| |||| |||| || |||||||||| |||||| || |||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||  ||    
T  10418423 tcttcggatgtc-ttgctttgccgatttgcatgatttcttcgtgaattacataaaaaacatcctaaaatttctatgtttcgggaagaacataattataga 10418521  T
Q  179 cagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaac 278  Q
    |  |||||||  ||| |||||||||||||||||||||| | |||||| ||||||||||||||||||| || |||||||||||| |||| |||||||||||    
T  10418522 ctcaaatatagaaaacattacaaatgttccgaaatcataggcaattgctctaatactcctctgttttgctagtaaaacctactgaaaatgactaaaaaac 10418621  T
Q  279 atgctaaga 287  Q
    ||| |||||    
T  10418622 atgttaaga 10418630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 101 - 297
Target Start/End: Original strand, 21502741 - 21502938
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| || |||||||| |||||||||||||| |||||||||||||||||||||| |  ||||| |||  || | ||  ||| ||||||    
T  21502741 cgatttgcatgatttcttcgtgaattacctcaaaaacaccctagaattgctatgtttcgggaagaatagaattacagactcaagtctagaaaacattaca 21502840  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacga-ctaaaaaacatgctaagaataatttaag 297  Q
    ||||| |||||||||| | |||||||||||||||||||||||||  || ||||||||||||||||| || | ||||||||||| | ||||||| ||||    
T  21502841 aatgtcccgaaatcataggcaattgttctaatactcctctgtttagctcgtaaaacctactaaaaatgaccgaaaaaacatgccacgaataatgtaag 21502938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 79 - 291
Target Start/End: Original strand, 144842 - 145052
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactga 178  Q
    ||||||| |||| |||  || |||||||||| |||||  || |||||||||| ||||||| |||| ||||||||||||||||||||||||| |||||  |    
T  144842 tcttcggatgtctttgttttgccgatttgcatgatttgttcgtgaattacataaaaaacatcctacaattgctatgtttcgggaagaacataattacata 144941  T
Q  179 cagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaac 278  Q
    |  |||||||  ||| |||| |||| | |||||||||| | |||||| |||||||||| || ||||| |||||||||||||||||||| ||||  |||||    
T  144942 ctcaaatatagaaaacattataaat-tcccgaaatcataggcaattgctctaatactcatccgttttgctggtaaaacctactaaaaatgact-gaaaac 145039  T
Q  279 atgctaagaataa 291  Q
    ||| |||||||||    
T  145040 atgttaagaataa 145052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 121 - 297
Target Start/End: Complemental strand, 6039487 - 6039311
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    ||||||||||||||| || ||||||||| |||| ||||||||||||||| ||||| |||  |||||||  |||  |||||||||| || | ||||| |||    
T  6039487 tgaattacatcaaaatcatcctaaaatttctatctttcgggaagaacataattacagactcaaatatagaaaactttacaaatgtcccaatatcatcgac 6039388  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||||| ||||||| | ||||||| | ||||||||| ||||| |||| |||| ||||||||| |||||||||| ||||    
T  6039387 aattgctctaatattactctgttatgctggtaaaatctactgaaaatgactgaaaaacatgttaagaataatgtaag 6039311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 23128094 - 23127914
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||||||| ||||||||||||||||||||||||||||||||    ||||| |||   ||||||  |||  ||||||||||||| |    
T  23128094 gatttcttcgtgaattacatcaagaacaccctaaaattgctatgtttcgggaagaatggaattacagactcgaatatagaaaaccttacaaatgttccaa 23127995  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||   |||||| ||||||||||||||| ||| |||||||||||||||||||  |||| ||| | ||||||| |||||    
T  23127994 aatcataagcaattgatctaatactcctctgctttgctggtaaaacctactaaaatagactgaaatatatgctaaaaataa 23127914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 6018246 - 6018435
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| || |||||||||||||||| |||||||||||| ||||||| ||||| || || |||||   |  |||||||  ||| | |||||    
T  6018246 gatttgcttgatttcttcgtgaattacatcaaaaataccctaaaattgttatgttttgggaaaaatataattacatgctcaaatatagaaaacaatacaa 6018345  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| |  ||||||| | |||||  |||||||||||||||||||  |||||||||||||||||| ||||| ||||||||||||| |||||    
T  6018346 atgtcctaaaatcataggcaattaatctaatactcctctgttttgttggtaaaacctactaaaatcgactgaaaaacatgctaaaaataa 6018435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 291
Target Start/End: Original strand, 9767682 - 9767862
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||||||| || ||||||||||| ||||||| ||||| |||||| |  ||||| |||  |||||||  ||| | || ||||||  |||    
T  9767682 gatttcttcgtgaattacattaagaacaccctaaagttgctatatttcgagaagaatagaattacagactcaaatatagaaaacaatataaatgtctcga 9767781  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| | |||||| |||||||||||||| |||| ||||||||||||||| |||| | || |||||||||||||||||||    
T  9767782 aatcataggcaattgatctaatactcctctatttttctggtaaaacctactgaaaatggctgaaaaacatgctaagaataa 9767862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 297
Target Start/End: Original strand, 23897149 - 23897323
Alignment:
Q  123 aattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaa 222  Q
    |||||| |||| || ||||||||| || |||||||||| ||||| |  ||||| |||  |||||||  ||| ||||||||||| | |||||||| | |||    
T  23897149 aattacttcaagaataccctaaaactgttatgtttcggaaagaatagaattacagactaaaatataaaaaatattacaaatgtcctgaaatcataggcaa 23897248  T
Q  223 ttgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||| | ||||||||||||||||| |||||||||| ||||||||  |||| ||||||||| |||||||||| ||||    
T  23897249 ttgatataatactcctctgttttgctggtaaaacatactaaaattgactgaaaaacatgttaagaataatgtaag 23897323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 297
Target Start/End: Original strand, 9288797 - 9288993
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| ||  ||||||||||||||| | |||||||||||||||||||  |||||| |  |||||  |   |||||||  ||| ||||||    
T  9288797 cgatttgcatgatttcttcgcgaattacatcaaaaaaatcctaaaattgctatgtttcaagaagaatagaattacataatcaaatatagaaaacattaca 9288896  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    | |||  | ||||||| |||||||||||||||||| ||  ||| ||||||||||||||||| |||  |||| |||||||||| ||||||||| ||||    
T  9288897 agtgtcacaaaatcatagacaattgttctaatacttcttggttctactggtaaaacctactgaaattgactgaaaaacatgccaagaataatgtaag 9288993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 297
Target Start/End: Original strand, 9298589 - 9298785
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| ||  ||||||||||||||| | |||||||||||||||||||  |||||| |  |||||  |   |||||||  ||| ||||||    
T  9298589 cgatttgcatgatttcttcgcgaattacatcaaaaaaatcctaaaattgctatgtttcaagaagaatagaattacataatcaaatatagaaaacattaca 9298688  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    | |||  | ||||||| |||||||||||||||||| ||  ||| ||||||||||||||||| |||  |||| |||||||||| ||||||||| ||||    
T  9298689 agtgtcacaaaatcatagacaattgttctaatacttcttggttctactggtaaaacctactgaaattgactgaaaaacatgccaagaataatgtaag 9298785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 291
Target Start/End: Original strand, 3736246 - 3736413
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    ||||||||||||| |||||||||||||||||  |||||| ||| || |  |||||  ||  |||||||  |||||||||||||||  ||||||||| | |    
T  3736246 tgaattacatcaataacaccctaaaattgct--gtttcgagaaaaatagaattacatactcaaatatag-aaaaattacaaatgtctcgaaatcataggc 3736342  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| ||||||| |||| || ||| ||||||||||||||| |||  ||||||||||||||||||||||||    
T  3736343 aattgatctaataatcctatgctttgctggtaaaacctactgaaatagactaaaaaacatgctaagaataa 3736413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 10332290 - 10332481
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||| |||| |||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| || |  | ||| | |   ||||||  ||| |||||    
T  10332290 ccgatatgcatgatttcttcatgaattacatcaaaaacatcctagaattgatatgtttcgggaaaaatagaactacaggctcgaatatagaaaacattac 10332389  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| || |||| ||   |||||| |||||||||||||| || |||| ||||||| |||| |||| |||| |||||||||||||||||||    
T  10332390 aaatgtcccaaaatgataagcaattgatctaatactcctcttttctacttgtaaaacatactgaaaatgactgaaaaacatgctaagaataa 10332481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 291
Target Start/End: Complemental strand, 21707516 - 21707357
Alignment:
Q  133 aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaa- 231  Q
    ||||||||||| |||||||||||||| ||||||| |  ||||| ||   |||||||  ||| |||||||||||  |||| |||| | ||||||||||||     
T  21707516 aaaacaccctagaattgctatgtttcaggaagaatagaattacagattcaaatatagaaaacattacaaatgtctcgaactcataggcaattgttctaaa 21707417  T
Q  232 tactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| |||||| |||||||||||||||||||||| || | ||||| |||||||||||||    
T  21707416 tactcttctgttatactggtaaaacctactaaaaatgattgaaaaatatgctaagaataa 21707357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 5237077 - 5236886
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | |||||||||||||||||| |||||| |  |  ||||| |||  ||||| |  ||| |||||    
T  5237077 ccgatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgttacgggaaaactagaattacagactcaaatacagaaaacattac 5236978  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || || ||||||| |  |||||||||||| ||||||  |||| ||| ||||||||||| ||||  ||| |||||||||||||||||||    
T  5236977 aaaagtcccaaaatcataggaaattgttctaatcctcctcctttttgctgctaaaacctactgaaaataactgaaaaacatgctaagaataa 5236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 101 - 291
Target Start/End: Complemental strand, 8052639 - 8052449
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccc-taaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||||||| |||||| || |||||||| |||||| | ||| |||||||||||||||||||||| |  |  |||||  ||  |||||||  ||| |||||    
T  8052639 cgatttgcatgatttcttcgtgaattacttcaaaacctcccctaaaattgctatgtttcgggaaaactaaaattacaaactcaaatatagaaaacattac 8052540  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| ||||||||||||| | ||||  ||||||||||||||  |||| ||| ||||||||||| |||| ||||  ||||||||||||||||||    
T  8052539 aaaagttccgaaatcataggcaatcattctaatactcctcatttttgctgctaaaacctactgaaaatgact-gaaaacatgctaagaataa 8052449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 14195730 - 14195825
Alignment:
Q  196 ttacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||| | ||||||||||   ||| || ||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  14195730 ttacaaatttcccgaaatcataagcaactgctctaatactcctctgttttgctggtaaaacctactaaaaatgactgaaaaacatgctaagaataa 14195825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 26249286 - 26249095
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||| |||||||||||||||||||  |||| |  |  |||||  ||  |||||||  ||| |||||    
T  26249286 ccgatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgttttaggaaaactagaattacaaactcaaatatagaaaacattac 26249187  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||  | | ||||||||  |||||||||||||||||| ||  |||| ||| ||||||||||| |||| |||| |||||||||||| ||||||    
T  26249186 aaaaatcctgaaatcataaacaattgttctaatactcatcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctatgaataa 26249095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 9079093 - 9078901
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| ||||||||  | || ||||||||||||||||||| |  || |||||  ||  |||||||  ||| |||||    
T  9079093 ccgatttgcatgatttcttcgtgaattacttcaaaaacctcatataattgctatgtttcgggaaaactataattacaaactcaaatatagaaaacattac 9078994  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaagaataa 291  Q
    ||| || | |||||||| |||||| |||| ||||||||||  |||| ||| | ||||||||| ||||  ||| ||||||||||||||||||||    
T  9078993 aaaagtcctgaaatcatagacaatcgttccaatactcctcctttttgctgctgaaacctactgaaaataactgaaaaaacatgctaagaataa 9078901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 292
Target Start/End: Original strand, 21233989 - 21234181
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||| |||| ||||||  | ||| |||||||||||||| |||||| ||||||| ||| |||||||| |  ||||   ||  |||||||  ||| |||||    
T  21233989 ccgatatgcatgatttctccgtgagttacatcaaaaacatcctaaatttgctatattttgggaagaatagaattataaactcaaatatagaaaacattac 21234088  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataat 292  Q
    |||||| ||  |||||| ||||| |  ||||||||||||||||| | ||||||||||||| |||||| |||| || |||||||||| ||||||    
T  21234089 aaatgtcccagaatcatagacaaattctctaatactcctctgttatgctggtaaaacctattaaaaatgactgaataacatgctaaaaataat 21234181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 23173814 - 23173705
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| ||||| ||||||| ||||||||||||||||||||||  |||| | | ||||||||| ||||||  ||| |||||||||    
T  23173814 aaatatagaaaacattacaaaagttccaaaatcatagacaattgttctaatactcctcctttttgcagctaaaacctattaaaaataactgaaaaacatg 23173715  T
Q  282 ctaagaataa 291  Q
    ||||||||||    
T  23173714 ctaagaataa 23173705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 7399224 - 7399404
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| ||||||||| | |||||||||||||||||||||||||| |||||||| |||||||| || ||||   ||  |||||||  |||  ||||    
T  7399224 ccgatttgcatgatttcgtcgttaattacatcaaaaacaccctaaaattactatgttttgggaagaatataattaaaaactcaaatatagaaaatgttac 7399323  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||          || | |||||| |||||||||| |||||||| || ||||| ||||||||||||||||  |||||||| |||||||||    
T  7399324 aaatg----------ataggcaattgatctaatactcttctgttttgctagtaaaccctactaaaaacgact-gaaaacatgttaagaataa 7399404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 139 - 291
Target Start/End: Complemental strand, 8977642 - 8977490
Alignment:
Q  139 ccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcct 238  Q
    ||||||||||||||||||||||||| |  |  ||||| |||  |||||||  ||| |||||||| || | |||||||| | || ||||||||||||||||    
T  8977642 ccctaaaattgctatgtttcgggaaaattagaattacagactcaaatatagaaaacattacaaaagtcctgaaatcataggcagttgttctaatactcct 8977543  T
Q  239 ctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |  |||| ||| ||||||||||| |||| || | ||||| |||||||||||||    
T  8977542 cctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataa 8977490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 4450557 - 4450748
Alignment:
Q  101 cgatttgcaagatttcgtcatgaat-tacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||||||| |||||| || ||||  |||||||||||| ||||||||||||||||||| ||||| |  |  ||||  | |  |||||||  ||| |||||    
T  4450557 cgatttgcatgatttcttcgtgaaactacatcaaaaaccccctaaaattgctatgttttgggaaaactagaattatagtctcaaatatagaaaacattac 4450656  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||  | |||| |||||||||||||||  ||||  || ||||||||||| |||| ||||  ||||||||||||||||||    
T  4450657 aaaagtcccgaaatcacaggcaatcgttctaatactcctccattttgttgctaaaacctactgaaaatgactggaaaacatgctaagaataa 4450748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 8317648 - 8317513
Alignment:
Q  104 tttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaat 203  Q
    |||||| |||||| || |||||||| ||||||||||||| ||||||||||||||||| || |  |  ||||| |||  |||||||  ||| ||||||||     
T  8317648 tttgcatgatttcttcgtgaattacttcaaaaacaccctcaaattgctatgtttcggaaaaactagaattacagactcaaatatagaaaacattacaaaa 8317549  T
Q  204 gttccgaaatcattgacaattgttctaatactcctc 239  Q
    || |||||||||| | |||| |||||||||||||||    
T  8317548 gtcccgaaatcataggcaatcgttctaatactcctc 8317513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 11804586 - 11804775
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| || |||||| | |||||||| ||| ||||||||||||||||||||| |  |  |||||  ||  |||||||  ||| ||||||    
T  11804586 cgatttgcatgatttcttcgtgaatttcttcaaaaaccccc-aaaattgctatgtttcgggaaaactagaattacatactcaaatatagaaaacattaca 11804684  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    || || | |||||||| | |||| ||||||||||| |||  |||| ||| ||||||||||| |||| |||| ||||||||| || ||||||    
T  11804685 aaagtcctgaaatcataggcaatcgttctaatactgctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgttatgaataa 11804775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 290
Target Start/End: Original strand, 1589127 - 1589316
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| || ||||||||||||| ||||||||||||||||||| |||||||||||| |  |||||  ||  |||||||   || | |||||    
T  1589127 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgctatatttcgggaagaatagaattacatactcaaatatagacaacaatacaa 1589226  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctact-aaaaacgactaaaaaacatgctaagaata 290  Q
    ||||   ||||||||   |||||  ||||||||||||||  ||| | | ||||||||||| ||||| | || ||||||||||||||||||    
T  1589227 atgtcttgaaatcatatgcaattaatctaatactcctctactttgcagataaaacctactgaaaaatggctgaaaaacatgctaagaata 1589316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 277
Target Start/End: Complemental strand, 5221146 - 5221002
Alignment:
Q  133 aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaat 232  Q
    |||||| |||||||||||||||||||| |||||| |  ||||  |||  |||||||  ||| ||||||||||| ||||||||||   ||||||||||| |    
T  5221146 aaaacatcctaaaattgctatgtttcgagaagaatagaattatagactcaaatatagaaaacattacaaatgtaccgaaatcataagcaattgttctagt 5221047  T
Q  233 actcctctgttttactggtaaaacctactaaaaacgactaaaaaa 277  Q
    |||||||| || | || |||||| ||||| |||  ||||||||||    
T  5221046 actcctctattctgcttgtaaaatctactcaaattgactaaaaaa 5221002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 3585842 - 3585779
Alignment:
Q  19 ggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    ||||| |||||||||||||||| || | |||||||||||||| |||||||||||||||||||||    
T  3585842 ggaacatgggaacataattcctcccattgtaaagtcttctgagacctcttgaatcttcattctt 3585779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 297
Target Start/End: Complemental strand, 3585734 - 3585536
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccc-taaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||| || |||| ||| | ||||| |||| ||||||||||||||||||| || |  |  ||||| |||  |||||||  ||| ||||    
T  3585734 ccgatttgcatgatttcttcgtgaaatacttaaaaaaaacccctaaaattgctatgtttcggaaaaactagaattacagactcaaatatagaaaacatta 3585635  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
     ||| ||  ||||||||| | ||||  || |||||||||||  |||| ||| ||||||||||| |||| || | |||||||||||||||||||| ||||    
T  3585634 taaaagtcacgaaatcataggcaatcattttaatactcctccattttgctgctaaaacctactgaaaatgattgaaaaacatgctaagaataatgtaag 3585536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 5047044 - 5046979
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||||||| |||||| || ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  5047044 ccgatttgcatgatttcttcgtgaattacatcaaaa-cactctaaaattgctatgtttcgggaagaa 5046979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 6046414 - 6046604
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| || |||||||| |||||||  |||||||||||  |||||||||||| |  |  ||||| |||  |||||||  ||| ||||||    
T  6046414 cgatttgcatgatttcttcgtgaattacttcaaaaaacccctaaaattgtcatgtttcgggaaaactagaattacagactcaaatatagaaaacattaca 6046513  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    || || || ||||||| | ||||  ||| ||||||||||  |||  ||| || ||| |||| |||| |||||||||||||| |||||||||    
T  6046514 aaagtcccaaaatcataggcaataattcaaatactcctccttttagctgctacaacttactgaaaatgactaaaaaacatgttaagaataa 6046604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 1586172 - 1586268
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||||| | |||||||| |||||||| |||||| ||||||| |||| |||||| ||||||||   || ||||  ||||||||||||||||||    
T  1586172 attacaaatgtcctgaaatcatagacaattgctctaatgctcctctattttgctggtataacctactggtaaagactggaaaacatgctaagaataa 1586268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 15171085 - 15171017
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| | |||||| ||||||| |||| ||||||||||||||  |||||||||||||||||||||    
T  15171085 tcttggaacttaggaacaaaattcctccctttgtaaagtcttctgaggcctcttgaatcttcattcttc 15171017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 266
Target Start/End: Original strand, 25692686 - 25692842
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||||  ||||||||| |||||||||  ||||||||||||| |  |  ||||| |||  |||||||  ||| |||||||| |||||||    
T  25692686 gatttcttcttgaattatttcaaaaacatcctaaaattattatgtttcgggaaaactagaattacagactcaaatatagaaaatattacaaaagttccga 25692785  T
Q  211 aatcattgacaattgttctaatactcc-tctgttttactggtaaaacctactaaaaa 266  Q
     ||||| |||||| ||||||||||||| | | |||||||  ||||||||||| ||||    
T  25692786 tatcatagacaatcgttctaatactccttattttttacttctaaaacctactgaaaa 25692842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 20175980 - 20176042
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||| ||||||| |||||||||||    
T  20175980 ccgatttgcaaaatttcttcatgaattacatc-aaaacaccctagaattgctgtgtttcgggaa 20176042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 239
Target Start/End: Original strand, 20577390 - 20577529
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | |||| |||||||||||||||||||| |  |  ||||| | |  |||||||  ||| |||||    
T  20577390 ccgatttgcatgatttcttcgtgaattacttcaaaacccccctcaaattgctatgtttcgggaatactagaattacaggctcaaatatagaaaacattac 20577489  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    ||| ||  ||||||||| | |||| |||||||||||||||    
T  20577490 aaaagtctcgaaatcataggcaatcgttctaatactcctc 20577529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 287
Target Start/End: Complemental strand, 39270363 - 39270296
Alignment:
Q  220 caattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaaga 287  Q
    |||| |||||||||||||||  |||||||| |||||| ||||||||| |||| |||||||||||||||    
T  39270363 caatcgttctaatactcctcctttttactgctaaaacttactaaaaatgactgaaaaacatgctaaga 39270296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 7399112 - 7399182
Alignment:
Q  14 ttcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttcg 84  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||  |  ||||||||||||| ||||||||    
T  7399112 ttcttggaacatgggaacacaattcctcccttcgtaaagtcttcataggcctcttgaatctttattcttcg 7399182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 291
Target Start/End: Original strand, 9918091 - 9918244
Alignment:
Q  138 accctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcc 237  Q
    |||| ||||||||||| |||||||||||| |||||||  |||  |||||||  ||| ||||||||| | ||||| ||||  ||||||| |||||||| ||    
T  9918091 acccaaaaattgctatatttcgggaagaatatgattagagactcaaatatagaaaacattacaaatctcccgaagtcataaacaattgctctaatacccc 9918190  T
Q  238 tctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| ||||    || |||| |||| |||| |||| |||||||||  ||||||||    
T  9918191 tctattttggatgttaaacttactgaaaatgactcaaaaacatgtcaagaataa 9918244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 291
Target Start/End: Original strand, 9926003 - 9926156
Alignment:
Q  138 accctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcc 237  Q
    |||| ||||||||||| |||||||||||| |||||||  |||  |||||||  ||| ||||||||| | ||||| ||||  ||||||| |||||||| ||    
T  9926003 acccaaaaattgctatatttcgggaagaatatgattagagactcaaatatagaaaacattacaaatctcccgaagtcataaacaattgctctaatacccc 9926102  T
Q  238 tctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| ||||    || |||| |||| |||| |||| |||||||||  ||||||||    
T  9926103 tctattttggatgttaaacttactgaaaatgactcaaaaacatgtcaagaataa 9926156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 20597488 - 20597549
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||| |||||| || ||| |||| |||||||| |||||||||||||||||||||||||    
T  20597488 gatttgcatgatttcttcgtgacttacttcaaaaaccccctaaaattgctatgtttcgggaa 20597549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 8310059 - 8309991
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| |||||||| |||||||||||   ||||||||| |||  |||||||||||||||||||||    
T  8310059 tcttggaacatgggaacagaattccttcctctctaaagtcttatgaggcctcttgaatcttcattcttc 8309991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 9767559 - 9767627
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| | |||||||||||||| ||   ||||||||||||||  |||||||||||||||||||||    
T  9767559 tcttggaacttaggaacataattcctccccctgtaaagtcttctgatgcctcttgaatcttcattcttc 9767627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 10585496 - 10585440
Alignment:
Q  27 ggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||||| ||||||| |||| |||||||||||||| |||| |||||||||||||||||    
T  10585496 ggaacaaaattcctccctttgtaaagtcttctgagaccttttgaatcttcattcttc 10585440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 18986955 - 18986764
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacacccta-aaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||| || |||||||| |||||||| ||||| |||| ||||||||||  ||| |  |  |||||  ||  |||||||  ||| ||||    
T  18986955 ccgatttgcatgatttcttcgtgaattacttcaaaaac-ccctacaaatagctatgtttcaagaaaactagaattacaaactcaaatatagaaaatatta 18986857  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| || | |||||||| | || | |||||||||||||||  |||| ||| ||||| ||||| |||  |||| |||||||||||||||||||    
T  18986856 caaaagtcctgaaatcataggcagtcgttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataa 18986764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 19001583 - 19001392
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacacccta-aaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||| || |||||||| |||||||| ||||| |||| ||||||||||  ||| |  |  |||||  ||  |||||||  ||| ||||    
T  19001583 ccgatttgcatgatttcttcgtgaattacttcaaaaac-ccctacaaatagctatgtttcaagaaaactagaattacaaactcaaatatagaaaatatta 19001485  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| || | |||||||| | || | |||||||||||||||  |||| ||| ||||| ||||| |||  |||| |||||||||||||||||||    
T  19001484 caaaagtcctgaaatcataggcagtcgttctaatactcctcctttttgctgctaaaatctactgaaattgactgaaaaacatgctaagaataa 19001392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 25692567 - 25692627
Alignment:
Q  19 ggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcatt 79  Q
    ||||| |||||||||||||||| || | ||||||||||||||  |||||||||||||||||    
T  25692567 ggaacttgggaacataattcctcccattgtaaagtcttctgaggcctcttgaatcttcatt 25692627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 2505730 - 2505792
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccc-taaaattgctatgtttcgggaa 163  Q
    ||||||||| |||||| || ||||||||||| ||||||||| ||||||||||||||||||||||    
T  2505730 cgatttgcatgatttcttcttgaattacatc-aaaacacccttaaaattgctatgtttcgggaa 2505792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 239
Target Start/End: Complemental strand, 2507019 - 2506881
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattac-tgacagaaatatattaaaaattaca 200  Q
    |||||||| |||||| || ||||||| ||||||| |||||||||||| |||||||| ||||| || |  ||||| ||||  |||||||  ||| ||||||    
T  2507019 gatttgcatgatttcttcgtgaattagatcaaaa-caccctaaaatttctatgttttgggaataatagaattacatgactcaaatatagaaaacattaca 2506921  T
Q  201 aatgt-tccgaaatcattgacaattgttctaatactcctc 239  Q
    ||||| ||  |||||||   ||||||||||||||||||||    
T  2506920 aatgtctcgaaaatcataagcaattgttctaatactcctc 2506881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 290
Target Start/End: Original strand, 2565899 - 2565982
Alignment:
Q  207 ccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    |||||||||| |||||| ||| |||||||||||  ||||  ||  |||||||||| |||| |||| ||||||||||||||||||    
T  2565899 ccgaaatcatagacaatcgttataatactcctcctttttcttgccaaaacctactgaaaatgactgaaaaacatgctaagaata 2565982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 291
Target Start/End: Original strand, 10611623 - 10611790
Alignment:
Q  124 attacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaat 223  Q
    ||||| |||||||  ||||||||||||||||||| ||||| |  |  ||||  |||  |||||||  ||| |||||||| || ||| |||||| | ||||    
T  10611623 attacttcaaaaaacccctaaaattgctatgtttagggaaaactagaattagagactcaaatatagaaaacattacaaaagtcccgtaatcataggcaat 10611722  T
Q  224 tgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     |||||||||||| ||  |||| ||| ||||||||| | ||||  ||| | |||||||||||||||||    
T  10611723 cgttctaatactcatcctttttgctgctaaaacctatttaaaatcactgagaaacatgctaagaataa 10611790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 290
Target Start/End: Complemental strand, 8317270 - 8317108
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    |||||||||| || |||||| ||||||||||||||||| ||||||| |  ||||| |||  || ||||| ||| ||||      | | ||||||||   |    
T  8317270 tgaattacatgaagaacaccttaaaattgctatgtttctggaagaatagaattacagactaaattatataaaacatta------tcctgaaatcatatgc 8317177  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    ||||||||| ||||||| || ||||  ||||||||||||||||||  ||||||||  |||||||||||||    
T  8317176 aattgttcttatactcc-ctattttgttggtaaaacctactaaaatagactaaaatccatgctaagaata 8317108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 297
Target Start/End: Complemental strand, 15170994 - 15170778
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactga 178  Q
    ||||||| |||| |||| || ||||||| || |||||| || ||||||||||| |||||| ||||||||| |||| ||| ||||||||||  ||||  ||    
T  15170994 tcttcggttgtc-ttgctttgccgatttacatgatttcttcgtgaattacatccaaaacatcctaaaattactatattttgggaagaacaaaattaaaga 15170896  T
Q  179 cagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaac 278  Q
       |||||||  ||| ||||||||||| | |||||||    |||||  | ||||||||||| ||||||||||| ||| ||| | |||| ||||  ||||     
T  15170895 -tcaaatatagaaaacattacaaatgtcctgaaatcacatgcaatttatttaatactcctccgttttactggtgaaatctattgaaaatgactggaaaat 15170797  T
Q  279 atgctaagaataatttaag 297  Q
    ||  |||||||||| ||||    
T  15170796 attgtaagaataatgtaag 15170778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 1589012 - 1589080
Alignment:
Q  15 tcttggaacctgggaacataattccttccttc-gtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||  | | |||||||||||||||||    
T  1589012 tcttggaacttgggaacataattcc-tccttctgtaaagtcttctgaggcatgttgaatcttcattcttc 1589080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 3173678 - 3173787
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| || || ||||||| | ||||  ||||||||||||||   ||||||| | ||||||| | |||| |||| |||||||||    
T  3173678 aaatatagaaaatattacaaaagtcccaaaatcataggcaatctttctaatactcctcccatttactgctgaaacctaatgaaaatgactgaaaaacatg 3173777  T
Q  282 ctaagaataa 291  Q
    ||||||||||    
T  3173778 ctaagaataa 3173787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 290
Target Start/End: Complemental strand, 10585377 - 10585208
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    |||||||| |||| ||| ||||||||||| |||||||||| || || |  |||||  ||  | || ||  ||| ||||||||| | |||||||||| |      
T  10585377 tgaattacttcaagaaccccctaaaattgttatgtttcggaaaaaaaagaattacatacttagatgtagaaaatattacaaatctcccgaaatcatagga 10585278  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    |||||| ||||||||||| || |||  ||||||||||||||||||   ||  ||||| ||||||||||||    
T  10585277 aattgtcctaatactcctttggtttgttggtaaaacctactaaaataaacataaaaatatgctaagaata 10585208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 17831024 - 17831084
Alignment:
Q  22 acctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    |||| |||||| ||||||| |||  ||||||||||||||  ||||||||||||||||||||    
T  17831024 acctaggaacagaattcctccctctgtaaagtcttctgaagcctcttgaatcttcattctt 17831084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 21233878 - 21233946
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| | ||||||||| ||||  ||| |||||||||| | | ||||||||||||||||||||||    
T  21233878 tcttggaacttaggaacataactcctcgctttgtaaagtcttttaagacctcttgaatcttcattcttc 21233946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 26249391 - 26249331
Alignment:
Q  22 acctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    ||||| ||||| |||||||||| | ||||||||| ||||  ||||||||||||||||||||    
T  26249391 acctgagaacagaattccttccattgtaaagtctcctgaagcctcttgaatcttcattctt 26249331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 1732557 - 1732600
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacacccta 143  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||    
T  1732557 ccgatttgcatgattttgtcttgaattacatcaaaaacacccta 1732600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 9134694 - 9134757
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||| || |||||| || |||||||| |||| || | ||||||||||||||||||||||||    
T  9134694 ccgatttacatgatttcttcgtgaattacttcaataaaatcctaaaattgctatgtttcgggaa 9134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 1254905 - 1254844
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||||  |||||| || ||||||||||||||| ||||||| |||||||||||||| ||||    
T  1254905 cgatttgcttgatttcttcgtgaattacatcaaaa-caccctataattgctatgtttcaggaa 1254844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 5471950 - 5471810
Alignment:
Q  91 attgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatatt 190  Q
    ||||| || |||||||||| |||||| || |||||||| | ||||  ||||||||||||||||   ||| |||||| || ||||| |||  |||||||      
T  5471950 attgctttgccgatttgcatgatttcttcttgaattactttaaaag-accctaaaattgctat---tcgagaagaatataattacagactcaaatataga 5471855  T
Q  191 aaaaattacaaatgttccgaaatcattgacaattgttctaatact 235  Q
    ||| ||||||||| | ||||||| ||   ||||||||||||||||    
T  5471854 aaacattacaaatatcccgaaattataagcaattgttctaatact 5471810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 13252867 - 13252805
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||||| |||||| || |||||||| |||||| | ||||||||||| ||||||| |||||    
T  13252867 cgatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgttatgttttgggaa 13252805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 19154744 - 19154786
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||    
T  19154744 tgaattacatcaagaacaccctataattcctatgtttcgggaa 19154786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 20754143 - 20754185
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||    
T  20754143 tgaattacatcaagaacaccctataattcctatgtttcgggaa 20754185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 20175869 - 20175934
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattc 80  Q
    ||||| ||| |||||||||||||||| |||| |||  |||||| ||  ||||||||||||||||||    
T  20175869 tcttgaaacttgggaacataattcctccctttgtattgtcttccgaggcctcttgaatcttcattc 20175934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 4988105 - 4988169
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||||  |||||| |||  |||||| |||| ||| | ||||||||||||||||||||||||||    
T  4988105 gatttgcttgatttcttcacaaattacttcaagaaccctctaaaattgctatgtttcgggaagaa 4988169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 4992203 - 4992267
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||||  |||||| |||  |||||| |||| ||| | ||||||||||||||||||||||||||    
T  4992203 gatttgcttgatttcttcacaaattacttcaagaaccctctaaaattgctatgtttcgggaagaa 4992267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 8158829 - 8158889
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||  |||| ||| |||||||||| ||||||||||||||||| ||  ||||||||||    
T  8158829 atttgcatcattttgtcttgaattacataaaaaacaccctaaaatttcttggtttcgggaa 8158889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 9501931 - 9501963
Alignment:
Q  133 aaaacaccctaaaattgctatgtttcgggaaga 165  Q
    |||||| ||||||||||||||||||||||||||    
T  9501931 aaaacatcctaaaattgctatgtttcgggaaga 9501963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 9722338 - 9722453
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgatta-ctgacagaaatatattaaaaattac 199  Q
    ||||||||| |||||| |  || |||||||||||| ||||||| |||||||||||||  ||||||| || ||||  ||||  |||||||  ||| || ||    
T  9722338 cgatttgcatgatttctttgtggattacatcaaaa-caccctataattgctatgtttttggaagaatattattatatgactcaaatatagaaaacataac 9722436  T
Q  200 aaatgttccgaaatcat 216  Q
    |||||| ||||||||||    
T  9722437 aaatgtcccgaaatcat 9722453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 75
Target Start/End: Original strand, 10418331 - 10418391
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatctt 75  Q
    ||||||||| ||||||||||||| || | || ||||||||||||||   ||||||||||||    
T  10418331 tcttggaacttgggaacataatttctccttttgtaaagtcttctgaggtctcttgaatctt 10418391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 15611243 - 15611184
Alignment:
Q  106 tgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||| |||||| || ||||||||| ||||| ||| ||||| ||||||||||||||||||||    
T  15611243 tgcatgatttcttcgtgaattacaacaaaa-cactctaaatttgctatgtttcgggaagaa 15611184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 21428571 - 21428639
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| |||||| | ||||||| | |  |||||||||| |||  |||||||||||||||||||||    
T  21428571 tcttggaacttgggaatagaattcctccatctgtaaagtcttttgaggcctcttgaatcttcattcttc 21428639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 41227 - 41416
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || ||||||||||||| |||||||||||||||  ||||||| |||| || |  ||||| |||  |||||||  ||| |||||||    
T  41227 gatttgcatgatttcttcgtgaattacatcaagaacaccctaaaattgtaatgtttctggaataatagaattacagacttaaatatagaaaacattacaa 41326  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| |||||||| | |||||| ||||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||    
T  41327 atgttctgaaatcataggcaattgatctaatactcctctgttttgctggtaaaacctactaaaaataactgaaaaacatgctaagaataa 41416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 7e-43; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 79 - 291
Target Start/End: Original strand, 25024972 - 25025183
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactga 178  Q
    ||||||| ||||| ||  || |||||||||| |||||| || |||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||  |    
T  25024972 tcttcggatgtcaatgttttgccgatttgcatgatttcttcgtgaattacat-aaaaacaccctaaaattactatgtttcggaaagaacaggattacata 25025070  T
Q  179 cagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaac 278  Q
    |  |||||||  ||| ||||||||||| || ||||||| | ||||||  ||||| ||||| |||||| |||||||||||||||||||| |||| ||||||    
T  25025071 ctcaaatatagaaaacattacaaatgtcccaaaatcataggcaattgcactaatgctcctttgttttgctggtaaaacctactaaaaatgactgaaaaac 25025170  T
Q  279 atgctaagaataa 291  Q
    |||||||||||||    
T  25025171 atgctaagaataa 25025183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 9849918 - 9849727
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||  |||||  ||  |||||||  |||  ||||    
T  9849918 ccgatttgcatgatttcttcgtgaattacat-aaaaacaccctaaaattgctatgtttcgggaagaacaaaattacatactcaaatataggaaactttac 9849820  T
Q  200 aaatgttcc-gaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| |||  |||||||| | |||||| |||||||||||| ||||||  ||||||||||||||||||| |||| |||||||| ||||||||||    
T  9849819 aaattttcttgaaatcataggcaattgatctaatactcctttgttttgttggtaaaacctactaaaaatgactgaaaaacatactaagaataa 9849727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 289
Target Start/End: Complemental strand, 19883712 - 19883534
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||||||||||||||||| |||| ||||||||||||||||| || ||||  |||  |||||||  ||| ||||||||||| ||||    
T  19883712 gatttcttcgtgaattacatcaaaaacaccctataatttctatgtttcgggaagaatataattatagactcaaatatagaaaacattacaaatgtcccga 19883613  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaat 289  Q
    |||||| |||||||||||||||||||| ||| |||  |||||||||||||| |||| ||   |||||||| ||||||||    
T  19883612 aatcatagacaattgttctaatactcccctgctttgttggtaaaacctactgaaaatgatcgaaaaacatactaagaat 19883534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 111 - 291
Target Start/End: Original strand, 5691653 - 5691832
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||||||| ||||||||||||||||||||| |||||||||| |  ||||  |||  |||||||  ||| | ||||||||||| ||    
T  5691653 gatttcttcgtgaattacatcaagaacaccctaaaattgctatgtctcgggaagaatagaattatagactcaaatatagaaaacaatacaaatgttctga 5691752  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||  ||  | ||||||||||||||||||    
T  5691753 aatcatagacaattgatctaatactcctctgcttt-ctggtaaaacctactaaaattgataagaaaacatgctaagaataa 5691832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 297
Target Start/End: Original strand, 10106178 - 10106378
Alignment:
Q  97 ttaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaat 196  Q
    ||||||||||| | |||||| ||||||||||  | |||||| ||||||||||||||||||||||||| |  || ||||| |||  |||||||  ||| ||    
T  10106178 ttaccgatttgtatgatttcttcatgaattattttaaaaaccccctaaaattgctatgtttcgggaaaactataattacagactcaaatatagaaaacat 10106277  T
Q  197 tacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaa 296  Q
    |||| | || |||||||||| |||||||||| |||||||||||  |||| | | ||||||||||| |||| |||  |||||||||||||||||||| |||    
T  10106278 tacagaagtcccgaaatcatagacaattgttgtaatactcctcctttttgcagctaaaacctactgaaaatgacagaaaaacatgctaagaataatgtaa 10106377  T
Q  297 g 297  Q
    |    
T  10106378 g 10106378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 14573336 - 14573525
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| |  ||||||||||||||||||| |||||||||||||||||||||||||| |  |||||  |   |||||||  ||| ||||||    
T  14573336 cgatttgcatgatttctttgtgaattacatcaaaaacacactaaaattgctatgtttcgggaagaatagaattacatattcaaatatagaaaacattaca 14573435  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| |   ||||| || |||||||| ||||||||||||||||||| || |||||||||||| |||| |||| ||||| |||||||||||||    
T  14573436 aatatcatgaaataatagacaattgctctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataa 14573525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 292
Target Start/End: Original strand, 17711192 - 17711384
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | ||||||||||||||||||||||||| |  |  ||||  |||  |||||||  ||| || ||    
T  17711192 ccgatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcgggaaaactagaattaaagactcaaatatagaaaacatcac 17711291  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataat 292  Q
    ||| || ||||||| || | |||| |||||||||||||||  |||| | | ||||||||||| |||| |||||||||||||||||||||||||    
T  17711292 aaaagtcccgaaattataggcaatcgttctaatactcctcatttttgcagctaaaacctactgaaaatgactaaaaaacatgctaagaataat 17711384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 142 - 297
Target Start/End: Complemental strand, 22350409 - 22350254
Alignment:
Q  142 taaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctg 241  Q
    ||||||||||||||||||| || || |  ||||| |||  |||||||  | ||||||||||||| ||||||| || |||||||| |||||||||| ||||    
T  22350409 taaaattgctatgtttcggaaaaaatagaattacagactcaaatataaaataaattacaaatgtcccgaaatgatagacaattgatctaatactcttctg 22350310  T
Q  242 ttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
     ||| |||||||||||||||||||   ||| |||||||||||||||||||| ||||    
T  22350309 gtttgctggtaaaacctactaaaataaactgaaaaacatgctaagaataatgtaag 22350254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 297
Target Start/End: Original strand, 15166375 - 15166551
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    |||||||| |||||||| |||||||||| |||||||||||||| |  |  |||||  ||  |||||||  ||| |||||||| || |||||||||  | |    
T  15166375 tgaattacttcaaaaaccccctaaaattcctatgtttcgggaaaattagaattacaaactcaaatatagaaaacattacaaaagtcccgaaatcacaggc 15166474  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||| |||||||||||||||  |||| ||| ||||||||||| |||| |||| |||||||||||||||||||| ||||    
T  15166475 aatcgttctaatactcctcgtttttgctgctaaaacctactgaaaatgactgaaaaacatgctaagaataatgtaag 15166551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 291
Target Start/End: Complemental strand, 20828370 - 20828159
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactga 178  Q
    ||||||| |||| |||| || |||||||||| |||||| || ||||||||||||| ||| ||||||||||||||||||||||||| |   | ||||| ||    
T  20828370 tcttcggatgtc-ttgctttgccgatttgcatgatttcttcgtgaattacatcaagaacgccctaaaattgctatgtttcgggaaaactctcattacaga 20828272  T
Q  179 cagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaac 278  Q
    |  ||||| |  ||  ||||||||||| || ||||||| | |||||||| |||||||||| | |||| ||| ||| ||||| | |||| |||| |||||     
T  20828271 ctcaaatacagaaaccattacaaatgtcccaaaatcataggcaattgttgtaatactcctttattttgctgctaatacctattgaaaaagactgaaaaag 20828172  T
Q  279 atgctaagaataa 291  Q
    |||||||||||||    
T  20828171 atgctaagaataa 20828159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 11512237 - 11512046
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| |  || |||| ||||||||||||||| ||||||||| ||||| |||||| |  ||||| | |  ||||||   ||| |||||    
T  11512237 ccgatttgcatgatttctttgtggattatatcaaaaacaccctagaattgctatctttcgagaagaatagaattacagtcttaaatattgaaaatattac 11512138  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| | |||||||| ||||||| ||||||||||||| |||||| || ||||||||||||  ||  |||| ||||||||| |||||||||    
T  11512137 aaatgtcctgaaatcatagacaattattctaatactcctttgttttgcttgtaaaacctactgcaattgactgaaaaacatgataagaataa 11512046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 291
Target Start/End: Original strand, 7583717 - 7583869
Alignment:
Q  139 ccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcct 238  Q
    ||||||||||||||||||||||||| |  |  ||||| |||  |||||||  ||| |||||||| || | |||||||| | |||||||||||||||||||    
T  7583717 ccctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaaaagtcctgaaatcataggcaattgttctaatactcct 7583816  T
Q  239 ctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |  |||| ||| ||||||||||| |||| || | ||||| |||||||||||||    
T  7583817 cctttttgctgctaaaacctactgaaaatgattgaaaaagatgctaagaataa 7583869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 283
Target Start/End: Original strand, 16928810 - 16928993
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||  || |||||||||||||||| || || |  |  ||||| |||  |||||||  ||| |||||    
T  16928810 ccgatttgcatgatttcttcgtgaattacttcaaaaatcccttaaaattgctatgttttggaaaaactagaattacagactcaaatatagaaaacattac 16928909  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgct 283  Q
    ||| |||||||||| || ||||||  ||||||||||||||  |||| | | ||||||||||| |||| |||| |||||||||||    
T  16928910 aaaagttccgaaattatagacaatcattctaatactcctcatttttgccgctaaaacctactgaaaatgactgaaaaacatgct 16928993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 291
Target Start/End: Complemental strand, 9263532 - 9263370
Alignment:
Q  129 atcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttc 228  Q
    |||||||||||| |  ||||||||||||||||||| || |  ||||| |||  |||||||| ||| ||||||||||  || |||| || |||||||||||    
T  9263532 atcaaaaacacctttgaattgctatgtttcgggaataatagaattacagactcaaatatataaaacattacaaatgacccaaaattatagacaattgttc 9263433  T
Q  229 taatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||||| ||| | ||| ||||||||| | ||   |||| ||||||||||||| |||||    
T  9263432 taatactcctcagttctgctgataaaacctattgaatttgactgaaaaacatgctaaaaataa 9263370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 266
Target Start/End: Original strand, 17108604 - 17108770
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||| || |||||||||||||||||||||| |  |  ||||| |||  |||||||  ||| |||||    
T  17108604 ccgatttgcatgatttcttcgtgaattacttcaaaaaccccataaaattgctatgtttcgggaaaactagaattacagactcaaatataaaaaacattac 17108703  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaa 266  Q
    ||| || | |||||||| | ||||| ||||||||||| ||  |||| ||| ||||||||||| ||||    
T  17108704 aaaagtcctgaaatcataggcaatttttctaatactcatcctttttgctgttaaaacctactgaaaa 17108770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 287
Target Start/End: Original strand, 9053894 - 9054078
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || || ||||||||||||  |||||||||||||||||||||| ||||||    ||||  |||  |||||||  ||| |||||||    
T  9053894 gatttgcatgatttcttcgtgcattacatcaaaat-accctaaaattgctatgtttcgagaagaattgtattatagactcaaatatagaaaatattacaa 9053992  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaaga 287  Q
    |||| | ||||||||   |||||| |||||||||| ||| || | || |||||||||||| |||| ||||  ||||||||||||||    
T  9053993 atgtcctgaaatcataaccaattgatctaatactcatctattctgcttgtaaaacctactgaaaatgactgcaaaacatgctaaga 9054078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 11252339 - 11252149
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | |||||||||||||||||||||| || |  |  || || |||  |||||||  ||| |||||    
T  11252339 ccgatttgcatgatttcttcgtgaattacttcaaaacc-ccctaaaattgctatgtttcggaaaaactagaatcacagactcaaatatagaaaatattac 11252241  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||| | |||| |||||||||||||| | ||||  || |||| ||||||||||   ||| ||||||||||||| |||||    
T  11252240 aaaagtcccgaaatcataggcaatcgttctaatactcctttttttttttgctaaatcctactaaaataaactgaaaaacatgctaaaaataa 11252149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 18447650 - 18447460
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||  || |||||||||| |||| ||||||||||||| ||||||||| |||||| |  |||||  ||  |||||||  |||||||||    
T  18447650 ccgatttgcatgatttgttcgtgaattacattaaaa-caccctaaaattgttatgtttcgagaagaatagaattacaaactcaaatatagaaaaaattac 18447552  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| | ||||||||||   |||||  |||||||| |||||  | |    ||||||||||||||||| |||| | |||||||||||||||||    
T  18447551 aaatatcccgaaatcataagcaatttctctaatacccctctaatctggatgtaaaacctactaaaaatgactcataaacatgctaagaataa 18447460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 125 - 291
Target Start/End: Original strand, 17277756 - 17277922
Alignment:
Q  125 ttacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaatt 224  Q
    |||| |||| ||| ||||||||||||||||||| |||||||| |  ||| |  ||| |||||||  ||| |||||| ||||   |||||||| | |||||    
T  17277756 ttacttcaagaaccccctaaaattgctatgttttgggaagaatagaattgcatacacaaatataaaaaacattacagatgtcatgaaatcataggcaatt 17277855  T
Q  225 gttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | |||||||| | | || ||| |||||||||| ||||||||  |||| |||||||||||||||||||    
T  17277856 gatctaatacccatttgctttgctggtaaaacttactaaaatagactgaaaaacatgctaagaataa 17277922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 291
Target Start/End: Complemental strand, 17335565 - 17335375
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatga-ttactgacagaaatatattaaaaattac 199  Q
    ||||||||| |||||| || |||||||| |||||||| ||||||||||| |||||||  |||| |||  || |||| |||  || ||||  |||||||||    
T  17335565 cgatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgttatgtttatggaa-aactagagttacagactcaattatagaaaaaattac 17335467  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| ||  | ||||||| | |||| |||||||||||||||  |||| ||  |||||| |||| |||| |||| |||||||||| ||||||||    
T  17335466 aaaagtctcaaaatcataggcaatcgttctaatactcctcctttttgcttctaaaacttactgaaaatgactgaaaaacatgccaagaataa 17335375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 9536957 - 9536775
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccc-taaaattgctatgtttcgggaagaac-atgattactgacagaaatatattaaaaattacaaatgttcc 208  Q
    |||||| || |||||||| |||||||| ||| |||||||||||||||| ||||| ||  |  ||||  |||  |||||||  ||| |||||||| |||||    
T  9536957 gatttcttcgtgaattacttcaaaaacccccctaaaattgctatgtttagggaaaaattaaaattatagactcaaatatagaaaacattacaaaagttcc 9536858  T
Q  209 gaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     ||||||| |  ||||||| |||||||||||  |||| ||| ||||||||||| ||||  | | |||||||||||||||||||    
T  9536857 aaaatcataggtaattgttgtaatactcctcctttttgctgctaaaacctactgaaaataattgaaaaacatgctaagaataa 9536775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 261
Target Start/End: Original strand, 10236478 - 10236636
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| || |||||||| |||| ||||||||||||||||||| |||| ||||||| |  |||||  ||   ||||||  | | |||||||    
T  10236478 gatttgcttgatttcttcgtgaattacttcaacaacaccctaaaattgctatttttcaggaagaatagaattacaaac-tcaatataaaatacattacaa 10236576  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctact 261  Q
    |||| |||||||||| | |||||| || ||||||| |||  ||| |||||||||||||||    
T  10236577 atgtaccgaaatcataggcaattgatcaaatactcttcttctttgctggtaaaacctact 10236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 289
Target Start/End: Original strand, 12616695 - 12616789
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaat 289  Q
    |||||||| || |||||||||| |  |||||||||||||||| ||  |||| ||| ||||||||||| |||| |||| ||||||||| |||||||    
T  12616695 attacaaaagtcccgaaatcataggaaattgttctaatactcatcctttttgctgctaaaacctactgaaaaagactgaaaaacatgttaagaat 12616789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 12836160 - 12836090
Alignment:
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||||||||||||| | |||| || ||||||  ||||||||| |||| |||||||||||||||||||    
T  12836160 aattgttctaatactcctttattttccttgtaaaatatactaaaaatgactgaaaaacatgctaagaataa 12836090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 291
Target Start/End: Complemental strand, 16669899 - 16669741
Alignment:
Q  133 aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaat 232  Q
    |||||| |||||||||||| ||||| |||||||| || |||||  ||  |||||||  ||| ||||||||| |  |||||||||   |||||||||||||    
T  16669899 aaaacatcctaaaattgctttgttttgggaagaatataattacatactcaaatatagaaaatattacaaatttctcgaaatcataagcaattgttctaat 16669800  T
Q  233 actcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||   || || | || |||||||||||| |||  || | |||||||||||||||||||    
T  16669799 actttcctcttctgcttgtaaaacctactgaaattgattgaaaaacatgctaagaataa 16669741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 291
Target Start/End: Complemental strand, 8968279 - 8968091
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||| |||||||  ||||||||||||||| ||||||||| |  |  |||||  ||  |||||||  ||| ||||||||    
T  8968279 atttgcatgatttcttcgtgaattacttcaaaaaatccctaaaattgctatatttcgggaaaactagaattacaaactcaaatatagaaaatattacaaa 8968180  T
Q  203 tgttccgaaatcattgacaattgttctaatactc-ctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     || || ||||||| |  ||| |||||||  |||  ||| |||| ||| ||||||||||| |||| |||| |||||||||||||||||||    
T  8968179 agtaccaaaatcatagggaatcgttctaaatctctatct-ttttgctgctaaaacctacttaaaatgactgaaaaacatgctaagaataa 8968091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 9850019 - 9849962
Alignment:
Q  25 tgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    |||||||| ||||||| |||| |||||||||||||| ||||||||||| |||||||||    
T  9850019 tgggaacagaattcctccctttgtaaagtcttctgagacctcttgaattttcattctt 9849962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 291
Target Start/End: Original strand, 17434375 - 17434511
Alignment:
Q  155 tttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaa 254  Q
    |||||||||||| |  ||||| |||  |||||||  ||| ||||||||||| ||||||||||   |||||| |||||||||||||| ||   |   ||||    
T  17434375 tttcgggaagaatagaattacagacccaaatatagaaaacattacaaatgtcccgaaatcataagcaattgatctaatactcctctattccgcaattaaa 17434474  T
Q  255 acctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||| |||| |||| ||||||||||||| |||||    
T  17434475 acctactgaaaatgacttaaaaacatgctaaaaataa 17434511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 15047654 - 15047844
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatca--aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||| |||||  |||||||||| ||||  ||||||||||| |||| ||||| ||| ||||||| || ||||| |||  |||||||  ||| | ||||    
T  15047654 atttgcatgatttattcatgaattatatcagaaaaacaccctagaatttctatggttctggaagaatataattacagactcaaatatagaaaacactaca 15047753  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | |||  ||||||||| | |||| |||||| ||  ||| |||| | | | ||||||||||| |||  |||| |||||||||| ||||||||    
T  15047754 attgtctcgaaatcatagtcaatcgttctagtaaacctttgttatgcggataaaacctactgaaattgactgaaaaacatgccaagaataa 15047844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 291
Target Start/End: Complemental strand, 15106770 - 15106580
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatca--aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||| |||||  |||||||||| ||||  ||||||||||| |||| ||||| ||| ||||||| || ||||| |||  |||||||  ||| | ||||    
T  15106770 atttgcatgatttattcatgaattatatcagaaaaacaccctagaatttctatggttctggaagaatataattacagactcaaatatagaaaacactaca 15106671  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | |||  ||||||||| | |||| |||||| ||  ||| |||| | | | ||||||||||| |||  |||| |||||||||| ||||||||    
T  15106670 attgtctcgaaatcatagtcaatcgttctagtaaacctttgttatgcggataaaacctactgaaattgactgaaaaacatgccaagaataa 15106580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 17277621 - 17277688
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    ||||||||| |||||||| ||||||| |||| |||||||||| |||  |||||||| |||||||||||    
T  17277621 tcttggaacttgggaacaaaattcctccctttgtaaagtcttatgaggcctcttgagtcttcattctt 17277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 297
Target Start/End: Original strand, 18750740 - 18750907
Alignment:
Q  130 tcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttct 229  Q
    |||||| | ||||||||||||||||||||| ||| |  |  |||||  ||  |||||||  ||| |||||||| || || ||||||| | |||||| |||    
T  18750740 tcaaaacccccctaaaattgctatgtttcgagaaaactagaattacatactcaaatataaaaaacattacaaaagtcccaaaatcataggcaattgctct 18750839  T
Q  230 aatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||||||||||  |||| ||| |||| |||||| ||||  ||| ||||| ||||||| |||||| ||||    
T  18750840 aatactcctcctttttgctgctaaaccctactgaaaataactgaaaaatatgctaaaaataatgtaag 18750907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 19335429 - 19335370
Alignment:
Q  92 ttgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgct 151  Q
    |||| ||||||||||||| |||||| || |||||||||||||||||||| | ||||||||    
T  19335429 ttgctttaccgatttgcatgatttcttcttgaattacatcaaaaacaccttgaaattgct 19335370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 266
Target Start/End: Complemental strand, 19604064 - 19603902
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||| |||||||   |||||||||| ||||||||||||| |  || ||||  |||  |||||||  |||| ||| |||    
T  19604064 atttgcatgatttcttcgtgaattacttcaaaaaacgcctaaaattgttatgtttcgggaaaactataattatagactcaaatata-gaaaacttagaaa 19603966  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaa 266  Q
     || |||||||| | |||||||| |||||||||||||  |||| ||  ||||||||||| ||||    
T  19603965 agtcccgaaatcttagacaattgctctaatactcctcctttttgctactaaaacctactgaaaa 19603902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 282
Target Start/End: Original strand, 10432064 - 10432246
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||||| || |||||| || |||||||| |||| ||  ||||||||||||||||||| || ||    |  |||||  ||  |||||||  ||| ||||     
T  10432064 ccgattttcatgatttcttcctgaattacttcaataaacccctaaaattgctatgttttggaaaagctagaattacacactcaaatatagaaaatattat 10432163  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgc 282  Q
    ||| ||||||||||||| |||||| |||||||||||||||  |||| ||| | ||||||| | ||||  ||| ||||||||||    
T  10432164 aaaagttccgaaatcatagacaatagttctaatactcctcatttttgctgctgaaacctaattaaaataactgaaaaacatgc 10432246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 291
Target Start/End: Complemental strand, 19919323 - 19919159
Alignment:
Q  125 ttacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaatt 224  Q
    |||| |||| ||| |||||||| || ||||||||| ||| || |  ||||| |||  |||||||  ||| ||||||||| | |||||||||| |  ||||    
T  19919323 ttacttcaagaaccccctaaaagtgttatgtttcgagaataatagaattacagactcaaatatagaaaacattacaaat-tcccgaaatcataggaaatt 19919225  T
Q  225 gttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | ||||||| ||||||| |||  ||||| ||||||||||||   ||| |||||||||||||||||||    
T  19919224 gatctaata-tcctctggtttgttggtagaacctactaaaataaactgaaaaacatgctaagaataa 19919159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 17661836 - 17661892
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgttt 157  Q
    |||||||||| |||||| || ||||||||||| ||||||||||| |||||||||||||    
T  17661836 ccgatttgcatgatttcttcttgaattacatc-aaaacaccctagaattgctatgttt 17661892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 291
Target Start/End: Complemental strand, 19556746 - 19556561
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || |||||||| |||||| | ||||||||| ||||||||||||||| ||   || | | |||  |||||||  ||| |||||||    
T  19556746 gatttgcatgatttcttcgtgaattacttcaaaacc-ccctaaaatagctatgtttcgggaa-aattagaattcagactcaaatatagaaaacattacaa 19556649  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | ||||| ||||||| | |||| ||||||||||||| || | ||  || ||||||||| | |||| ||||  ||||||||||||||||||    
T  19556648 aagttccaaaatcataggcaatcgttctaatactcccct-tattggtgctaaaacctattgaaaatgact-gaaaacatgctaagaataa 19556561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 10236364 - 10236428
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcatt 79  Q
    ||||||||| || ||||| |||||||||||| |||||| |||||||  | |||||||||||||||    
T  10236364 tcttggaacttgagaacaaaattccttcctttgtaaagacttctgaggcatcttgaatcttcatt 10236428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 160
Target Start/End: Original strand, 11782366 - 11782426
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgg 160  Q
    |||||||| | |||||| || |||||||| |||||||| ||||||||||| ||||||||||    
T  11782366 ccgatttgaatgatttcttcgtgaattacttcaaaaaccccctaaaattgttatgtttcgg 11782426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 11782485 - 11782569
Alignment:
Q  207 ccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||||  |||||| |||||||||||| |   |||| |||  |||||||||| |||| |||||||||||||| |||||||||    
T  11782485 ccgaaatcacagacaatcgttctaatactcttactttttgctgtaaaaacctacttaaaatgactaaaaaacatgttaagaataa 11782569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 19927135 - 19927079
Alignment:
Q  27 ggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||||||||||||| |||| ||||| ||||||||  |||||| ||||||||||||||    
T  19927135 ggaacataattcctccctttgtaaaatcttctgaggcctcttaaatcttcattcttc 19927079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 25024881 - 25024949
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| | |||||||| ||| | |||| |||||||||| |||  |||||||||||||||||||||    
T  25024881 tcttggaacttcggaacatatttcttccctttgtaaagtcttttgaggcctcttgaatcttcattcttc 25024949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 26114523 - 26114455
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| |||||||| ||||| | | || |||||||||| |||  |||||||||||||||||||||    
T  26114523 tcttggaacttgggaacaaaattcatccatttgtaaagtcttttgaggcctcttgaatcttcattcttc 26114455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 8968390 - 8968327
Alignment:
Q  19 ggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    ||||| |||||||||||||||| ||   ||||||||||||||   |||||||||||||||||||    
T  8968390 ggaacttgggaacataattcctcccactgtaaagtcttctgaggtctcttgaatcttcattctt 8968327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 16928702 - 16928765
Alignment:
Q  19 ggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    ||||| ||||| ||||| |||| || | ||||||||||||||  ||||||||||||||||||||    
T  16928702 ggaacttgggagcataactcctgccattgtaaagtcttctgaggcctcttgaatcttcattctt 16928765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 19547262 - 19547200
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| || ||||||||||| ||||||||||| ||||| | |||||||||||    
T  19547262 ccgatttgcatgatttcttcttgaattacatc-aaaacaccctagaattgttttgtttcgggaa 19547200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 22345852 - 22345915
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcat 78  Q
    ||||||||| |||||||| ||||||| |||| |||| ||||| |||  ||||||||||||||||    
T  22345852 tcttggaacatgggaacaaaattcctccctttgtaatgtcttatgaggcctcttgaatcttcat 22345915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 12246754 - 12246701
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattac 175  Q
    |||||||||||||||  |||||||||||||||| |||||||||||| || |||||    
T  12246754 tgaattacatcaaaat-accctaaaattgctatatttcgggaagaatataattac 12246701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 25118077 - 25118016
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||||| |||||| || ||||||||||| |||||||| || |||||||||||||| ||||    
T  25118077 cgatttgcatgatttcttcttgaattacatc-aaaacaccttagaattgctatgtttcaggaa 25118016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 80
Target Start/End: Complemental strand, 19547373 - 19547308
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattc 80  Q
    ||||| ||| || |||||||||| || |||| |||| |||||| ||| ||||||||||||||||||    
T  19547373 tcttgaaacttgagaacataatttctccctttgtaatgtcttccgacgcctcttgaatcttcattc 19547308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 13588605 - 13588720
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgatta-ctgacagaaatatattaaaaattac 199  Q
    ||||||||| |||||| |  || |||||||||||| ||||||| |||||||||||||  ||||||| || ||||  ||||  |||||||  ||| || ||    
T  13588605 cgatttgcatgatttctttgtggattacatcaaaa-caccctataattgctatgtttttggaagaatattattatatgactcaaatatagaaaacataac 13588703  T
Q  200 aaatgttccgaaatcat 216  Q
    |||||| ||||||||||    
T  13588704 aaatgtcccgaaatcat 13588720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 17218454 - 17218554
Alignment:
Q  139 ccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcct 238  Q
    ||||||||||||||||||||||||| |  | |||||| |||  ||| |||  ||| | |||||| || |||||| ||| | |||| ||||||||||||||    
T  17218454 ccctaaaattgctatgtttcgggaaaattaggattacagactcaaagatagaaaacactacaaaagtcccgaaaacataggcaatcgttctaatactcct 17218553  T
Q  239 c 239  Q
    |    
T  17218554 c 17218554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 298
Target Start/End: Original strand, 19094246 - 19094334
Alignment:
Q  210 aaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaagt 298  Q
    ||||||| |||||||| ||||| ||| || || ||| |||||||||||||||||||  |||  ||||| ||| ||| |||||| |||||    
T  19094246 aaatcatagacaattgatctaaaacttctatgctttgctggtaaaacctactaaaattgacataaaaatatgttaaaaataatgtaagt 19094334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 81)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 17891618 - 17891808
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| || ||||||||||||||| |||| ||||| |||||||||| |||||||||| ||||||  ||  |||||||  ||| ||||||    
T  17891618 cgatttgcaggatttcttcgtgaattacatcaaaagcaccttaaaactgctatgttttgggaagaacaggattacaaactcaaatatagaaaacattaca 17891717  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| |||||||||| |  ||||  ||||||||||||||||||| ||||||||||||||| |||| |||| ||||||||| |||||||||    
T  17891718 aatgtcccgaaatcataggaaattactctaatactcctctgttttgctggtaaaacctactgaaaatgactgaaaaacatgttaagaataa 17891808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 104 - 297
Target Start/End: Original strand, 18553179 - 18553372
Alignment:
Q  104 tttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaat 203  Q
    |||||| |||||| ||||||||||||| || |||||| ||||||||||||||||  ||||||| |  ||||| |||  |||||||  ||| | | |||||    
T  18553179 tttgcatgatttcttcatgaattacattaagaacaccataaaattgctatgttttaggaagaatagaattacagactcaaatatagaaaacaattcaaat 18553278  T
Q  204 gttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    |||||||||| || | |||||| ||||||||||||||||||||||||||||||||| |||||  |  | |||||||||||| ||||||| ||||    
T  18553279 gttccgaaatgataggcaattgatctaatactcctctgttttactggtaaaacctattaaaataggttgaaaaacatgctaggaataatgtaag 18553372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 35680212 - 35680120
Alignment:
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| |||| |||| |||||||||||||||||||    
T  35680212 caaattttccgaaatcatagacaattgctctaatactcctctgttttgctggtaaaacctactgaaaatgacttaaaaacatgctaagaataa 35680120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 17350864 - 17351055
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||  |||||||| ||||||||||||||||||||||||| |  |  ||||| |||  |||||||  ||| |||||    
T  17350864 ccgatttgcatgatttcttcgtgaattaattcaaaaaccccctaaaattgctatgtttcgggaaaactagaattacggactcaaatatagaaaacattac 17350963  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || | |||||||| ||||||||||||||||||||||  ||||  || ||||||||||| ||||  ||| ||||| ||| |||||||||    
T  17350964 aaaagtcctgaaatcatagacaattgttctaatactcctcatttttgttgctaaaacctactgaaaataactgaaaaatatgttaagaataa 17351055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 100 - 297
Target Start/End: Complemental strand, 27907733 - 27907536
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| ||||||| |||||||||||||||||||||||||| |  |  |||||  ||  |||||||  ||| |||||    
T  27907733 ccgatttgcatgatttcttcgtgaattacttcaaaaaaaccctaaaattgctatgtttcgggaaaactagaattacaaactcaaatatagaaaacattac 27907634  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||| || |||||||||| | |||| ||| ||||||| |||  ||||  || |||||| |||| |||| |||| |||||||||||||||||||| ||||    
T  27907633 aaaagtcccgaaatcataggcaatagttttaatacttctcctttttgttgctaaaacttactgaaaatgactgaaaaacatgctaagaataatgtaag 27907536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 16257828 - 16257937
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||||||| ||||||||| |||||||  ||||||||| ||| ||||| ||||||||| ||||||||||||||| |||||||||    
T  16257828 aaatatagaaaacattacaaatgtttcgaaatcatagacaatttctctaatacttctcggttttgctggtaaaatctactaaaaacgactgaaaaacatg 16257927  T
Q  282 ctaagaataa 291  Q
     |||||||||    
T  16257928 ttaagaataa 16257937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 11464517 - 11464338
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||| |||| |||| ||| |||||||||||||||||||||||||||| |  | |||  ||  |||||||  ||| ||||||||||| || |    
T  11464517 gatttcttcgtgatttacttcaataaccccctaaaattgctatgtttcgggaagaatagaactacatactcaaatatagaaaacattacaaatgtcccta 11464418  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| | || ||| ||||||||||||||| |||||||  ||||||||||||||  ||||  ||||||||||||||||||    
T  11464417 aatcataggca-ttgatctaatactcctctgctttactgacaaaacctactaaaatagacttgaaaacatgctaagaataa 11464338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 64 - 291
Target Start/End: Complemental strand, 24086556 - 24086326
Alignment:
Q  64 ctcttgaatcttca---ttcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgg 160  Q
    ||||||||||||||   |||||||| |||  |||  || |||||||||| |||||| || |||||||| |||||| | ||||||||||||||||||||      
T  24086556 ctcttgaatcttcacaattcttcggttgttcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcta 24086457  T
Q  161 gaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctac 260  Q
    ||| |  |  ||||| |||  ||||||| |||  |||||||| ||  ||||||||| | |||| |||||||||||||||  |||| ||| |||| |||||    
T  24086456 gaaaactagaattacggactcaaatatagtaagcattacaaaagtctcgaaatcataggcaatcgttctaatactcctcctttttgctgctaaatcctac 24086357  T
Q  261 taaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||   ||| |||||||||||||||||||    
T  24086356 taaaataaactgaaaaacatgctaagaataa 24086326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 79 - 291
Target Start/End: Complemental strand, 34580005 - 34579793
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactga 178  Q
    ||||||| |||  |||| || |||||||||| |||||| || |||||||||| |||||||||||||||||||||||| | ||||  || |  |||||  |    
T  34580005 tcttcggatgttcttgctttgccgatttgcatgatttcttcgtgaattacataaaaaacaccctaaaattgctatgtattgggactaatagaattacata 34579906  T
Q  179 cagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaac 278  Q
      ||||||||  |||||||| |||| | |||||||||| | ||||||||||||||||||| || | | ||||||||  ||||| |||  ||  ||||||     
T  34579905 atgaaatataaaaaaaattataaatatcccgaaatcataggcaattgttctaatactcctttgctctgctggtaaattctactgaaattgataaaaaaat 34579806  T
Q  279 atgctaagaataa 291  Q
    |||||||||||||    
T  34579805 atgctaagaataa 34579793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 79 - 291
Target Start/End: Complemental strand, 34585754 - 34585542
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactga 178  Q
    ||||||| |||  |||| || |||||||||| |||||| || |||||||||| |||||||||||||||||||||||| | ||||  || |  |||||  |    
T  34585754 tcttcggatgttcttgctttgccgatttgcatgatttcttcgtgaattacataaaaaacaccctaaaattgctatgtattgggactaatagaattacata 34585655  T
Q  179 cagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaac 278  Q
      ||||||||  |||||||| |||| | |||||||||| | ||||||||||||||||||| || | | ||||||||  ||||| |||  ||  ||||||     
T  34585654 atgaaatataaaaaaaattataaatatcccgaaatcataggcaattgttctaatactcctttgctctgctggtaaattctactgaaattgataaaaaaat 34585555  T
Q  279 atgctaagaataa 291  Q
    |||||||||||||    
T  34585554 atgctaagaataa 34585542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 18758187 - 18758378
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| | |||| || |||||||| |||||| | | ||||||||||||||||||||||| |  |  ||||| |||  |||||||  ||| |||||    
T  18758187 ccgatttgcatgttttcttcgtgaattacttcaaaacccctctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattac 18758286  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||| | |||| |||||||||||||||  |||| ||  ||||||||||| ||||  | ||||||||||||||| |||||    
T  18758287 aaaagtcccgaaatcataggcaatcgttctaatactcctcctttttgctactaaaacctactgaaaataattaaaaaacatgctaaaaataa 18758378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 25532122 - 25532313
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||| | |||| ||||||||||||||||||||||||||||| |  |  ||||| ||| ||||||||  ||| |||||    
T  25532122 ccgatttgcatgatttcttcgtgaattgcttcaagaacaccctaaaattgctatgtttcgggaaaactagaattacagactgaaatatagaaaacattac 25532221  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||  |  ||||||||| | |||| |||||||||||||||  |||| ||| ||   ||||||||||   ||| |||||||||||||||||||    
T  25532222 aaaattcacgaaatcataggcaatcgttctaatactcctcctttttgctgctatttcctactaaaataaactgaaaaacatgctaagaataa 25532313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 25537442 - 25537633
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | ||||||||||||||||||||||||| |  |  ||||| |||  |||||||  ||| |||||    
T  25537442 ccgatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattac 25537541  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || | |||||||| | |||| | |||||||||||||  |||||||| ||   ||||||||||   ||| |||||||||||||||||||    
T  25537542 aaaagtccagaaatcataggcaatcgctctaatactcctcctttttactgttatttcctactaaaataaactgaaaaacatgctaagaataa 25537633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 100 - 285
Target Start/End: Original strand, 22627271 - 22627455
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||| |||| |||||| || ||||||||| ||||| || |||||||||||||||||   ||||||| |  ||||| ||   ||||| |  ||| |||||    
T  22627271 ccgatatgcatgatttcttcgtgaattacaacaaaa-catcctaaaattgctatgttataggaagaatagaattacagaatcaaataaagaaaacattac 22627369  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaa 285  Q
    |||||  || ||||||| |||||||  |||||||||||| | |||| ||||||||||||||| |||| ||||||||||||||||||    
T  22627370 aaatgcccctaaatcatagacaatttctctaatactcctatattttgctggtaaaacctactgaaaatgactaaaaaacatgctaa 22627455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 32086936 - 32087125
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| || |||||| | | || |||||||||||||||||||||||||||||||| |  |||||  ||  |||||||  ||| |||||||    
T  32086936 gatttgcttgatttcttcgtgaattgctttaagaacaccctaaaattgctatgtttcgggaagaatagaattacaaacccaaatataaaaaacattacaa 32087035  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||  | ||||||| |||||||| |||||||||||  |  |||  | ||||||||||||||||  |||||||||| ||||||| |||||    
T  32087036 atgtcgcaaaatcatagacaattgatctaatactccgatactttgatagtaaaacctactaaaatagactaaaaaatatgctaataataa 32087125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 287
Target Start/End: Original strand, 18545193 - 18545345
Alignment:
Q  135 aacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatac 234  Q
    |||||||| ||||||||||||||||||||||| |  |||||  ||  |||||||  ||| | | ||||||| |||||||||| | |||||| ||||||||    
T  18545193 aacaccctgaaattgctatgtttcgggaagaatagaattacaaactcaaatatagaaaacaattcaaatgtcccgaaatcataggcaattgatctaatac 18545292  T
Q  235 tcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaaga 287  Q
    |||| || |||||| |||||||||| | |||  |||| |||||||||||||||    
T  18545293 tcctatgatttactagtaaaacctatttaaatagactgaaaaacatgctaaga 18545345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 97 - 287
Target Start/End: Complemental strand, 27540479 - 27540289
Alignment:
Q  97 ttaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaat 196  Q
    ||||||||||||| |||||| || |||||||   ||||||| | |||||||| |||||||||||||| |  || ||||| |||  |||||||  ||| ||    
T  27540479 ttaccgatttgcatgatttcttcgtgaattaatacaaaaaccctctaaaatttctatgtttcgggaaaattataattacagacccaaatatacaaaacat 27540380  T
Q  197 tacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaaga 287  Q
    |||||| || | |||||||| || ||| ||||||||| |||||  ||||  || ||||||||||| |||| |||| ||||| |||||||||    
T  27540379 tacaaaagtcctgaaatcatagaaaatcgttctaatattcctcattttttatgctaaaacctactgaaaatgactgaaaaatatgctaaga 27540289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 291
Target Start/End: Complemental strand, 29717575 - 29717377
Alignment:
Q  91 attgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatatt 190  Q
    ||||| || ||||||||||  ||||| || |||||||||||||||| ||| || |||||||||||||||||||||| |  |||||  ||  |||||||      
T  29717575 attgctttgccgatttgcattatttcttcgtgaattacatcaaaaa-accttagaattgctatgtttcgggaagaata--attacatactcaaatataga 29717479  T
Q  191 aaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctact-aaaaacgactaaaaaacatgctaagaat 289  Q
    ||| ||||||||| | ||||||||||   |||||| | |||||||||| | || | || |||||||||||| ||||| || | |||||||||||||||||    
T  29717478 aaacattacaaatatcccgaaatcataagcaattgatataatactcctttattcttcttgtaaaacctactgaaaaatgattgaaaaacatgctaagaat 29717379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 25886402 - 25886211
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||| | |||||| |  |||||||| | |||||| ||||||||||||||||||||||||| |  |  ||||| |||  |||||||  ||| |||||    
T  25886402 ccgatttgtatgatttctttgtgaattactttaaaaaccccctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattac 25886303  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||| |||||| |||||||||||| ||  ||||  || ||||||||| | |||| |||  ||||||||| ||| |||||    
T  25886302 aaaagtcccgaaatcatagacaatcgttctaatactcttccttttttatgctaaaacctaatgaaaatgacagaaaaacatgataaaaataa 25886211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 22568941 - 22569131
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacacc-ctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    |||||||| |||||| ||||||||||| |||||||  || ||||||||||||||||||||||| |  |  |||||  ||  |||||||  ||| ||||||    
T  22568941 gatttgcacgatttcttcatgaattacttcaaaaaaccctctaaaattgctatgtttcgggaaaactagaattacaaactcaaatatagaaaacattaca 22569040  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    || || || ||||||| |  ||| ||||||||||| |||  |||| ||| ||||||||||| |||  |||| ||||||||| |||||||||    
T  22569041 aaagtaccaaaatcataggtaatcgttctaatacttctcattttttctgctaaaacctactgaaattgactgaaaaacatggtaagaataa 22569131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 285
Target Start/End: Original strand, 28930160 - 28930346
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | | |||||||||||||||||| | || |  || ||||  |||  |||||||  ||| |||||    
T  28930160 ccgatttgcatgatttcttcgtgaattacttcaaaacccctctaaaattgctatgtttcagaaaaactataattatagactcaaatatagaaaacattac 28930259  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaa 285  Q
    ||| || |||||||||| | |||||||||||||| |||||  |||| | | |||||| |||| |||| |||| ||||||||||||||    
T  28930260 aaaagtcccgaaatcataggcaattgttctaatattcctcatttttgcagctaaaacatactgaaaatgactgaaaaaacatgctaa 28930346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 297
Target Start/End: Complemental strand, 26651834 - 26651651
Alignment:
Q  112 atttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaa 211  Q
    ||||| |||||||||||| ||||| |||| |||||||||||| ||||| |||||| |  |||||  ||  |||||||  ||| |||||||||||  ||||    
T  26651834 atttcttcatgaattacaacaaaa-caccttaaaattgctat-tttcgagaagaatagaattacatacttaaatatagaaaacattacaaatgtctcgaa 26651737  T
Q  212 atcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    |||||   |||||| |||||||||| ||| || |||| || ||||||||| |||| |||| ||||||||| ||| |||||| ||||    
T  26651736 atcataagcaattgctctaatactcatctattctacttgtgaaacctactgaaaatgactcaaaaacatgttaaaaataatgtaag 26651651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 17199416 - 17199602
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| ||||||||||| |||||| | |||| |||||||||||||| ||||| |  |  ||||| |||  |||||||  ||| ||||||||    
T  17199416 atttgcatgatttcttcatgaattacttcaaaacc-ccctcaaattgctatgttttgggaaaactagaattacagactcaaatatagaaaacattacaaa 17199514  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     |||| ||| || |   |||| |||||||||||||||| |||| ||| ||   ||||||| |||| |||||||||||||||||||||||    
T  17199515 agttctgaagtcgtatgcaatcgttctaatactcctct-ttttgctgctatttcctactagaaactactaaaaaacatgctaagaataa 17199602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 294
Target Start/End: Original strand, 29850932 - 29851096
Alignment:
Q  130 tcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttct 229  Q
    |||| ||| |||||||||||||||||||||||||||| |  |||||  ||  ||| |||  ||| |||||||||||  | ||||||| |  ||||| |||    
T  29850932 tcaagaaccccctaaaattgctatgtttcgggaagaatagaattacatactcaaagatagaaaacattacaaatgtctcaaaatcatagggaattgatct 29851031  T
Q  230 aatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataattt 294  Q
    ||||||||| |  ||| | | ||||||||||||||| ||| | ||||||||| ||||||||||||    
T  29851032 aatactcctttagtttgccgataaaacctactaaaatcgattgaaaaacatgttaagaataattt 29851096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 34574400 - 34574591
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| |  |||||||| |||||| | |||||||||||||| |||||||||| |  |  |||||  ||  |||||||| ||| ||||||    
T  34574400 cgatttgcatgatttctttgtgaattacttcaaaacccccctaaaattgctaagtttcgggaaaactagaattacatactcaaatatataaaacattaca 34574499  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaagaataa 291  Q
    || || || ||||||| | || | |||||||||||||||   ||| ||  ||||||||||| ||||  ||| ||||||||||||||||||||    
T  34574500 aaagtcccaaaatcataggcattcgttctaatactcctcctattttctattaaaacctactgaaaataactaaaaaaacatgctaagaataa 34574591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 291
Target Start/End: Original strand, 27420969 - 27421148
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||| |||||  | ||||||||||||||||||||||||||| || |||||  ||  |||||||  ||| ||||||||||| ||||    
T  27420969 gatttcatcgtgaattacaacaaaat-atcctaaaattgctatgtttcgggaagaatataattacatactcaaatatagaaaacattacaaatgtcccga 27421067  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||   || ||| ||||||| |||| | || | || ||||| |||| | |||| |||| | ||| |||||||||||||    
T  27421068 aatcataagcagttgatctaatattcctttattctgcttgtaaatcctagtgaaaatgactgataaatatgctaagaataa 27421148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 291
Target Start/End: Original strand, 28766777 - 28766929
Alignment:
Q  139 ccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcct 238  Q
    ||||||||||||||||||||| |||||  |  ||||  ||   |||||||  ||| |||| |||||| |||||||| ||| |||||| ||||| ||||||    
T  28766777 ccctaaaattgctatgtttcgagaagagtagaattatagattcaaatataggaaacattataaatgtcccgaaatctttggcaattgatctaacactcct 28766876  T
Q  239 ctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| ||||  |||||||||||||||||   | | ||||||||| |||||||||    
T  28766877 ctggtttatgggtaaaacctactaaaatatattgaaaaacatgttaagaataa 28766929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 32141602 - 32141411
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattac-tgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||| || |||||| |||||||| || | || |||||||||||||| |||||||    ||||| ||||  |||||||  ||| ||||    
T  32141602 ccgatttgcatgatttcttcgtgaatttcatcaaaa-catcttagaattgctatgtttcaggaagaattgaattacatgactcaaatatagaaaacatta 32141504  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||  |||||||||   ||||  || |||||||||||| ||||    ||||||||||||||||| ||| || |||||| ||||||||||    
T  32141503 caaatgtctcgaaatcataagcaatgtttataatactcctctattttggatgtaaaacctactaaaaatgaccaataaacatactaagaataa 32141411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 25883554 - 25883499
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  25883554 gatttcttcatgaattacatcaagaacaccctaaaattgctacgtttcaggaagaa 25883499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 291
Target Start/End: Complemental strand, 23010233 - 23010063
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    ||||||| ||||| ||||   ||||||||||||||||| ||||||| |  |||   |||  |||||||  ||| | ||||||||| || |||||   | |    
T  23010233 tgaattatatcaataacatattaaaattgctatgtttcaggaagaatagaattcaagactcaaatatagaaaacaatacaaatgtcccaaaatcggaggc 23010134  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | ||| ||||||||||||  ||||| ||||||||||||| | |||| |||| |||||||||||||||||||    
T  23010133 agttgatctaatactccttcgttttgctggtaaaacctattgaaaatgactgaaaaacatgctaagaataa 23010063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 21905614 - 21905803
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaaca--ccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||| |||||| ||||||||||| ||||||| |  |||||||||||||||||| |||||| |  |  ||||| |||  |||||||  ||| |||||    
T  21905614 gatttgcatgatttcttcatgaattacttcaaaaaaaaaccctaaaattgctatgttccgggaaaactagaattacagactcaaatata--aaacattac 21905711  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||  ||||  |||||||   | ||  ||||||||||||||  |||| ||| |||||| |||  |||| |||| |||||||||||||||||||    
T  21905712 aagagttctaaaatcataagctatcattctaatactcctcctttttcctgctaaaacatacagaaaatgactgaaaaacatgctaagaataa 21905803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 20379175 - 20379311
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||| |||||||  |||| |||||||||||||| ||||| |  |  |||||  ||  | |||||  ||| ||||||||    
T  20379175 atttgcatgatttcttcgtgaattacttcaaaaagcccctcaaattgctatgttttgggaaaactagaattacatacttagatatagaaaacattacaaa 20379274  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctc 239  Q
     || |||||||||| |||||| |||||||||||||||    
T  20379275 agtcccgaaatcatagacaatcgttctaatactcctc 20379311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 28918169 - 28918265
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||| ||||  | ||||| | ||||||||||||||||||||  ||||   | ||||||||||| |||| |||| |||||||||||||||||||    
T  28918169 attacaaaagttcgaatatcataggcaattgttctaatactcctcctttttgtagctaaaacctactgaaaatgactgaaaaacatgctaagaataa 28918265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 32086802 - 32086866
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcatt 79  Q
    ||||||||| |||||||||||||||| |||| ||||||||| || |  |||||||||||||||||    
T  32086802 tcttggaacttgggaacataattcctccctttgtaaagtctcctaaagcctcttgaatcttcatt 32086866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 19139570 - 19139693
Alignment:
Q  142 taaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctg 241  Q
    |||||||||||||||||| ||| || |  |||| | ||  |||||| | ||| ||||||||||| || |||||||   |||||| || |||||||| |||    
T  19139570 taaaattgctatgtttcgagaataatagaattattaactcaaatatttaaaacattacaaatgtcccaaaatcataagcaattgatccaatactcccctg 19139669  T
Q  242 ttttactggtaaaacctactaaaa 265  Q
     ||| |||||||||||||||||||    
T  19139670 gtttgctggtaaaacctactaaaa 19139693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 34369213 - 34369275
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| || ||||||| ||||||| |||| ||||||||||||||||||||||    
T  34369213 ccgatttgcatgatttcatcttgaattatatcaaaa-caccataaaattgctatgtttcgggaa 34369275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 38796163 - 38796208
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctct 240  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  38796163 attacaaatgttccgaaatcataaacaattgatctaatactcctct 38796208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45572482 - 45572389
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45572482 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45572389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45576149 - 45576056
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45576149 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45576056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45579816 - 45579723
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45579816 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45579723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45583483 - 45583390
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45583483 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45583390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45587150 - 45587057
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45587150 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45587057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45590817 - 45590724
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45590817 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45590724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45594484 - 45594391
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45594484 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45594391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45598151 - 45598058
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45598151 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45598058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45601818 - 45601725
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45601818 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45601725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45605485 - 45605392
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45605485 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45605392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45609152 - 45609059
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45609152 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45609059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45612819 - 45612726
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45612819 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45612726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 45616486 - 45616393
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaaga 287  Q
    |||| |||||| || ||||||| | |||||||||||||| || | |||| ||||||||||||||||  |||  |||| ||||||||||||||||    
T  45616486 attataaatgtccccaaatcataggcaattgttctaatattcatatgttatactggtaaaacctaccgaaattgactaaaaaaacatgctaaga 45616393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 11464637 - 11464569
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| |||||| | ||||||| |||| || ||||||| |||  |||||||||||||||||||||    
T  11464637 tcttggaacttgggaatagaattcctccctttgttaagtcttttgaggcctcttgaatcttcattcttc 11464569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 17891505 - 17891573
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| || ||||||||||||| | || ||||| |||| |||  |||||||||||||||||||||    
T  17891505 tcttggaacttgagaacataattcctccttttgtaaattcttatgaggcctcttgaatcttcattcttc 17891573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 18120759 - 18120565
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaa---at 196  Q
    |||||||||| |||||| || |||||||| |||||||  |||| |||||| ||||||||||||| |  |  ||||| |||  | |||||  ||||   ||    
T  18120759 ccgatttgcatgatttcttcgtgaattacttcaaaaaatccctgaaattgttatgtttcgggaaaattagaattacagactcatatataaaaaaaaacat 18120660  T
Q  197 tacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| |  || |||||||||| | |||| |||||||||||||||  |||| ||| ||   ||||||||||   ||| |||||||||||||||||||    
T  18120659 tactatagtcccgaaatcataggcaatcgttctaatactcctccattttgctgctatttcctactaaaataaactgaaaaacatgctaagaataa 18120565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 27420847 - 27420915
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| ||| |||||| |||||||| | |||| |||||||||  || ||||||||||||||||||    
T  27420847 tcttggaacttggaaacatacttccttcccttgtaatgtcttctgaggccacttgaatcttcattcttc 27420915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 29834753 - 29834885
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| | ||||||||  |||| ||| || |||||||||||| |||||||||||| |  |||||  ||  |||||||  ||| |||||||    
T  29834753 gatttgcttgatttcttaatgaattatttcaagaaccccttaaaattgctatctttcgggaagaataaaattacaaactcaaatatagaaaacattacaa 29834852  T
Q  202 atgttccgaaatcattgacaattgttctaatac 234  Q
    |||| |  ||||||| |||||||| ||||||||    
T  29834853 atgtactaaaatcatagacaattgatctaatac 29834885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 8445684 - 8445629
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgt 155  Q
    ||||||||||  ||||| || |||||||||||||||||||  ||||||||||||||    
T  8445684 ccgatttgcataatttcttcttgaattacatcaaaaacactataaaattgctatgt 8445629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 16042868 - 16042814
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttc 158  Q
    ||||||| |||||| || |||||||||| |||| ||||||||||||||||||||||    
T  16042868 atttgcatgatttcttcttgaattacattaaaa-caccctaaaattgctatgtttc 16042814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 19198688 - 19198625
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| |  |||||| |||||| ||||||  |||||||||||||||||||||    
T  19198688 ccgatttgcatgatttctttgtgaatttcatcaagaacacctaaaaattgctatgtttcgggaa 19198625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 21905504 - 21905567
Alignment:
Q  19 ggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    ||||| ||| |||| |||||||||||  ||||||||| ||||  ||||||||||||||||||||    
T  21905504 ggaacttggaaacagaattccttcctatgtaaagtctcctgaggcctcttgaatcttcattctt 21905567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 26313146 - 26313261
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| ||||| |||| || | | || |||||||||||| |   |||| ||| ||||||||||| |||  || |||||||||||    
T  26313146 aaatataaaaaacattacaaaagttccaaaattataggcgatcgttctaatactcattctttttgctgctaaaacctactgaaattgattaaaaaacatg 26313245  T
Q  282 ctaagaataatttaag 297  Q
    ||||||||||| ||||    
T  26313246 ctaagaataatgtaag 26313261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 16157200 - 16157098
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataattt 294  Q
    |||| |||||| || |||||||   |||||||||||||||||||||  | |    | |||||||||| |||| |||| |||||||||||||||||||| |    
T  16157200 attataaatgtcccaaaatcataagcaattgttctaatactcctctagtgtggatgaaaaacctactgaaaatgactgaaaaacatgctaagaataatgt 16157101  T
Q  295 aag 297  Q
    |||    
T  16157100 aag 16157098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 20852969 - 20853031
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||||| |||||| || |||||||| |||||||  || ||||||||||||||||| ||||    
T  20852969 cgatttgcatgatttcttcctgaattacttcaaaaaacccttaaaattgctatgtttcaggaa 20853031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 28766648 - 28766702
Alignment:
Q  25 tgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcatt 79  Q
    ||||||||||||| || || | |||||||||||||| || |||||||||||||||    
T  28766648 tgggaacataatttctcccattgtaaagtcttctgagacatcttgaatcttcatt 28766702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 291
Target Start/End: Complemental strand, 32139512 - 32139354
Alignment:
Q  135 aacaccctaaaattgctatgttt-cgggaagaacatgattac-tgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaat 232  Q
    |||| |||| ||||||||||||| ||||||||| |   |||| ||| | |||||||  ||| ||||||||||| ||||||||||   ||||  | |||||    
T  32139512 aacatcctataattgctatgttttcgggaagaatagagttacatgatacaaatatagaaaacattacaaatgtcccgaaatcataagcaatgttactaat 32139413  T
Q  233 actcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||| || ||   ||||||||| ||||||| |||| | |||||| ||||||||||    
T  32139412 actcctctattctagatgtaaaacctgctaaaaatgactgataaacatactaagaataa 32139354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 18458449 - 18458384
Alignment:
Q  226 ttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||||||||||| ||| || |||||| |||||||||  |||| ||||||||| ||| |||||    
T  18458449 ttctaatactcctctggtttgctagtaaaaactactaaaatagactgaaaaacatgttaataataa 18458384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 18758089 - 18758142
Alignment:
Q  29 aacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    |||||||||||| || | ||||||||| ||||  ||||||||||||||||||||    
T  18758089 aacataattcctgccattgtaaagtctcctgaggcctcttgaatcttcattctt 18758142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Original strand, 29144523 - 29144580
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgg 160  Q
    ||||||| ||||||  | |||||||| |||||||| ||||||||||| ||||||||||    
T  29144523 atttgcatgatttctccgtgaattacttcaaaaaccccctaaaattgttatgtttcgg 29144580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45572689 - 45572644
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45572689 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45572644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45576356 - 45576311
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45576356 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45576311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45580023 - 45579978
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45580023 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45579978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45583690 - 45583645
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45583690 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45583645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45587357 - 45587312
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45587357 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45587312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45591024 - 45590979
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45591024 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45590979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45594691 - 45594646
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45594691 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45594646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45598358 - 45598313
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45598358 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45598313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45602025 - 45601980
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45602025 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45601980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45605692 - 45605647
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45605692 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45605647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45609359 - 45609314
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45609359 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45609314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45613026 - 45612981
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45613026 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45612981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 45616693 - 45616648
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctga 60  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||    
T  45616693 tcttggaacttgggaacaaaattcctccctttgtaaagtcttctga 45616648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 25882654 - 25882590
Alignment:
Q  227 tctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||||  | |||||| |||| ||||||||||||||  |||| ||||||||||||| |||||    
T  25882654 tctaatacttatttgttttgctggcaaaacctactaaaattgactgaaaaacatgctaaaaataa 25882590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 118 - 291
Target Start/End: Complemental strand, 24380546 - 24380373
Alignment:
Q  118 tcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcatt 217  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| |  ||||| |||  |||||||  ||| | || |||||||||||||||||     
T  24380546 tcatgaattacatcaagaacaccctaaaattgctatgttttgggaagaatagaattacagactcaaatatagaaaacaatagaaatgttccgaaatcata 24380447  T
Q  218 gacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | |||||||||||||||||||||||| | ||||||||||||||| |||  || | |||||||||||||||||||    
T  24380446 ggcaattgttctaatactcctctgttctgctggtaaaacctactgaaattgagtgaaaaacatgctaagaataa 24380373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 285
Target Start/End: Complemental strand, 4007351 - 4007177
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||| |||||| |||||||||||||||||||||||||||||||| |  ||||| |||  |||||||  ||| | |||||| ||  | |    
T  4007351 gatttcttcgtgaatttcatcaagaacaccctaaaattgctatgtttcgggaagaatagaattacagacttaaatatagaaaacaatacaaacgtctcaa 4007252  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaa 285  Q
    ||||||||||||||| |||||||||||||| |||| ||||| |||||||||||||| |||| |||||||||||||    
T  4007251 aatcattgacaattgatctaatactcctctattttgctggtgaaacctactaaaaatgactgaaaaacatgctaa 4007177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 100 - 297
Target Start/End: Complemental strand, 24381537 - 24381339
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||||||||||||||||||||||||||||||| |||||| || |  ||||| |||  |||||||  ||| | |||    
T  24381537 ccgatttgcatgatttcttcgtgaattacatcaaaaacaccctaaaattgctatgttacgggaataatagaattacagactcaaatatagaaaacaatac 24381438  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaagaataatttaag 297  Q
    ||| || ||||| |||| | ||||||||  |||||||||||||| | |||||||||||| || |||  |||| |||||||||||||||||||| |||||    
T  24381437 aaaagtaccgaagtcataggcaattgttaaaatactcctctgttctgctggtaaaacctgctgaaattgactgaaaaaacatgctaagaataacttaag 24381339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 7985005 - 7985194
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| || |||||||| |||| ||||||||||||||||||||||||| |||||| |  |||||  ||  ||||||| |||| |||||||    
T  7985005 gatttgcttgatttcttcgtgaattacttcaagaacaccctaaaattgctatgtttcgagaagaatagaattacatactaaaatatagtaaacattacaa 7985104  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | |||  |||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||   |||| ||| ||||| |||||||||    
T  7985105 aagttatgaaatcatagacaattgatttaatactcctctgttttgctggtaaaacctactaaatttgactgaaatacatgttaagaataa 7985194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 101 - 277
Target Start/End: Complemental strand, 19784990 - 19784814
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||||||| |||| |||||||||  |||||  ||  |||||||  ||| ||||||    
T  19784990 cgatttgcatgatttcttcgtgaattacatcaaaaacaccctaaaattgctatatttcaggaagaacagaattacatactcaaatatagaaaacattaca 19784891  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaa 277  Q
    ||| | || |||| || | |||||| ||| |||||||||| |||| || |||| ||||||||||||||||| |||||    
T  19784890 aatatcccaaaattataggcaattgctcttatactcctctattttgcttgtaacacctactaaaaacgactgaaaaa 19784814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 14271730 - 14271918
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || ||||||||||||| |||||||||||||| |||||||||||||| |   |||||||  ||  |||||||  ||| || |||||    
T  14271730 atttgcatgatttcttcgtgaattacatcaagaacaccctaaaatttctatgtttcgggaaaactctgattacatactcaaatatagaaaacatcacaaa 14271829  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || ||||||| | |||||  |||||||||||| |||||| || |||||||||||| |||| |  | |||||||||||||||||||    
T  14271830 tgtcccaaaatcataggcaattactctaatactcctttgttttgctagtaaaacctactgaaaaaggttgaaaaacatgctaagaataa 14271918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 285
Target Start/End: Original strand, 19791290 - 19791464
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||||| |||| ||| |  ||||||||||||||||  |||||||    ||||| |||  |||||||  ||| ||||||||||| ||||    
T  19791290 gatttcttcgtgaattacttcaagaaccctataaaattgctatgttttaggaagaatcaaattacagactcaaatataaaaaatattacaaatgtcccga 19791389  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaa 285  Q
    |||||| |||||||||| ||||||||||||| ||| ||||||||||||| |||||  |||| |||||||||||||    
T  19791390 aatcatagacaattgttttaatactcctctggtttgctggtaaaacctattaaaatagactgaaaaacatgctaa 19791464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 100 - 297
Target Start/End: Complemental strand, 15176642 - 15176446
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||| ||||||||||||||||||| ||||| |  |  ||||| |||  |||||||  ||| || ||    
T  15176642 ccgatttgcatgatttcttcgtgaattacttcaaaaac-ccctaaaattgctatgttttgggaaaactagaattacagactcaaatatagaaaacataac 15176544  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||| || |||||||||| | |||| |||||||||||||||  |||| ||| ||||||||||| |||  |||| ||| |||||||||||||||| ||||    
T  15176543 aaaagtcccgaaatcataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaacacatgctaagaataatgtaag 15176446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 20400222 - 20400411
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| || |||||||| |||||||| ||||||||||||||||||||||||| |  || |||||  ||  |||||||  ||| |||||||    
T  20400222 gatttgcttgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactataattacaaactcaaatatagaaaacattacaa 20400321  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || |||||||||| |  ||| |||||||||||||||  |||| ||| ||||||| ||| |||| |||| |||| ||||||||||||||    
T  20400322 aagtcccgaaatcataggaaatcgttctaatactcctcctttttgctgctaaaacccactgaaaatgactgaaaagcatgctaagaataa 20400411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 103 - 291
Target Start/End: Complemental strand, 30117866 - 30117678
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||| |||| |||||||||||||||||||||||  ||||||| |  |||||  ||  |||||||  ||| | ||| ||    
T  30117866 atttgcatgatttcttcgtgaattacctcaagaacaccctaaaattgctatgtttaaggaagaatagaattacatactcaaatatagaaaacaatacgaa 30117767  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | | |||||||||| |||||||  ||||||| |||| |||||| ||||||||||||||| |||| || | ||||||||||||| |||||    
T  30117766 tatcccgaaatcatagacaatttctctaatattcctatgttttgctggtaaaacctactgaaaatgaatgaaaaacatgctaaaaataa 30117678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 19265708 - 19265899
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||| |||| |||||| || |||||||| |||||||| ||||||||||||||||||||||||| |  |  ||||| ||   |||||||   || |||||    
T  19265708 ccgatatgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactagaattacagattcaaatatagacaacattac 19265807  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||| | ||||||||||||||||||||  ||||  || |||| ||||||||||   ||| |||||||||||||||||||    
T  19265808 aaaagtcccgaaatcataggcaattgttctaatactcctcctttttgttgttaaatcctactaaaataaactgaaaaacatgctaagaataa 19265899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 121 - 291
Target Start/End: Original strand, 6886575 - 6886747
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    ||||||||| ||| | ||||||||||||| |||||||| |||| |   ||||||| |||  |||||||  ||| ||||||||||| |||||||||| | |    
T  6886575 tgaattacaacaagaccaccctaaaattgatatgtttcaggaaaactctgattacagactcaaatatagaaaacattacaaatgtcccgaaatcataggc 6886674  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctact--aaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||  |||||||||||||| ||||  ||||||||||||||  ||||| | || |||||||||||||||||||    
T  6886675 aattactctaatactcctctattttgatggtaaaacctactaaaaaaaagtctgaaaaacatgctaagaataa 6886747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 79 - 291
Target Start/End: Original strand, 22501700 - 22501910
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactga 178  Q
    ||||||| |||| |||| || |||||||||| |||||  || ||||||||||||| ||||||||||||||| ||||||||||||| |   ||||||| ||    
T  22501700 tcttcggatgtc-ttgctttgccgatttgcatgatttattcgtgaattacatcaagaacaccctaaaattgttatgtttcgggaaaactctgattacaga 22501798  T
Q  179 cagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaac 278  Q
    |  |||||||  ||  ||||||||| |  | ||||||| | | |||  ||||||||||||||||||| ||||||||||| ||| |||| || | ||||||    
T  22501799 ctcaaatatagaaagcattacaaat-tctcaaaatcataggcgattactctaatactcctctgttttgctggtaaaaccaactgaaaaagattgaaaaac 22501897  T
Q  279 atgctaagaataa 291  Q
    ||| |||||||||    
T  22501898 atgataagaataa 22501910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 24583382 - 24583191
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||  || |||||||| |||||||| |||||||||||||||||||  ||||    |  |||||  |   |||||||  ||| |||||    
T  24583382 ccgatttgcatgattttttcgtgaattacttcaaaaaccccctaaaattgctatgttttaggaaacctagaattacaaattcaaatatagaaaacattac 24583283  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||| | |||| |||||||||||||||  |||| ||| ||||| |||||||||| |||| |||||||||||||||||||    
T  24583282 aaaagtcccgaaatcataggcaatcgttctaatactcctcctttttgctgctaaaatctactaaaaatgactgaaaaacatgctaagaataa 24583191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 26888374 - 26888563
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    ||||| || |||||| ||||||||||| | |||||| | ||||||||||||||||||||||| | ||| ||||| |||  |||||||  ||  |||||||    
T  26888374 gatttacatgatttcttcatgaattacttgaaaaaccctctaaaattgctatgtttcgggaaaaccataattacagactcaaatataaaaaccattacaa 26888473  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || || ||||||| |||||| |||| ||||||||||  ||||  || ||||||||||||||||  | | ||||| ||||||| |||||    
T  26888474 aagtcccaaaatcatagacaatcgttccaatactcctcctttttgttgctaaaacctactaaaaataaatgaaaaatatgctaaaaataa 26888563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 288
Target Start/End: Original strand, 14077001 - 14077195
Alignment:
Q  92 ttgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatatta 191  Q
    |||||||  ||||||||| |||||| |||||||||||||| |||||||| ||||||||||||||||  ||||||| |  || ||  ||  |||||||  |    
T  14077001 ttgcattgtcgatttgcatgatttcttcatgaattacatc-aaaacaccataaaattgctatgttttaggaagaatagaataacatactcaaatatagaa 14077099  T
Q  192 aaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaa 288  Q
    || ||||||||||| || |||||||   |||||| |||||||||||||| || |    |||||||||||| |||| |||||||||||||| ||||||    
T  14077100 aatattacaaatgtcccaaaatcataagcaattgatctaatactcctcttttctggatgtaaaacctact-aaaatgactaaaaaacatgttaagaa 14077195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 100 - 266
Target Start/End: Original strand, 17980679 - 17980845
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||  || |||||||||||||||||| |||| ||||||||||||||| |||||| |  | |||  ||  |||||||  ||| ||| |    
T  17980679 ccgatttgcatgattttttcgtgaattacatcaaaaacatcctagaattgctatgtttcgtgaagaatagaactacaaactcaaatatagaaaacattgc 17980778  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaa 266  Q
    |||||| || |||||||   ||||||||||||| ||| |||||| ||||||||| ||||||| ||||    
T  17980779 aaatgtcccaaaatcataagcaattgttctaatgctcatctgttctactggtaatacctactgaaaa 17980845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 13313400 - 13313291
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| || |||||||||| | ||||||||||||||||||||  |||| ||| ||||||||| | |||| |||| |||||||||    
T  13313400 aaatatagaaaacattacaaaagtcccgaaatcataggcaattgttctaatactcctcctttttgctgctaaaacctattgaaaatgactgaaaaacatg 13313301  T
Q  282 ctaagaataa 291  Q
    ||||||||||    
T  13313300 ctaagaataa 13313291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 15058703 - 15058524
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| |||||||||||| |||||  | |||||||||||||||||| ||||| || |  ||||  |||  |||||||  ||| ||||  ||||| ||||    
T  15058703 gatttcttcatgaattacaacaaaat-atcctaaaattgctatgttttgggaataatagaattaaagactcaaatatagaaaacattaacaatgtcccga 15058605  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||   |||||| |||||||||| | | ||||    ||||||||||||||||| ||||||||||||||||||||||||    
T  15058604 aatcataagcaattgctctaatactcttatattttggatgtaaaacctactaaaaatgactaaaaaacatgctaagaataa 15058524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 100 - 239
Target Start/End: Original strand, 26139674 - 26139813
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatg-attactgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||| || |||||||| |||||||| |||| |||||||||||||| ||||| ||| || |||||  ||  |||||||  ||| ||||    
T  26139674 ccgatttgcatgatttcttcgtgaattacttcaaaaacccccttaaattgctatgttttgggaa-aacttgaattacaaactcaaatatagaaaacatta 26139772  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    |||| ||||||||||||| | |||| |||||||||||||||    
T  26139773 caaaagttccgaaatcataggcaatcgttctaatactcctc 26139813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 24388582 - 24388444
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||| ||||||||||||||||||||||||| |  || ||||| ||   |||||||  ||| |||||    
T  24388582 ccgatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactataattacaga-tcaaatatagaaaacattac 24388484  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    ||| || || ||||||| | |||| |||||||||||||||    
T  24388483 aaaagtcccaaaatcataggcaatcgttctaatactcctc 24388444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 238
Target Start/End: Original strand, 30832825 - 30832963
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| ||||||||  ||||||||||||||||||||| || |  |  |||||  ||  ||| |||  ||| |||||    
T  30832825 ccgatttgcatgatttcttcgtgaattacttcaaaaacctcctaaaattgctatgtttcggaaaaactagaattacaaactcaaacatagaaaacattac 30832924  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcct 238  Q
    |||||||| |||||||| |||||||| ||||||||||||    
T  30832925 aaatgttctgaaatcatagacaattgctctaatactcct 30832963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 12343090 - 12342911
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaa-attacaaatgttccg 209  Q
    |||||| || ||||||||||||| ||||||||||||||| ||||||| | |||||| |  || || ||   |||||||  |||| || |||||||| ||     
T  12343090 gatttcttcgtgaattacatcaagaacaccctaaaattgttatgttttgagaagaatagaatcacagattcaaatataaaaaaacataacaaatgtccca 12342991  T
Q  210 aaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||| |||||| |||||||||||| |||||   ||||||||||||||||||  |||| ||||||| | |||||||||    
T  12342990 aaatcattg-caattgctctaatactcctttgtttgt-tggtaaaacctactaaaatagactgaaaaacaagttaagaataa 12342911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 291
Target Start/End: Original strand, 18007433 - 18007612
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||||||||||||||||||||  |||||| ||||||| ||||||    |||||  ||  ||||| |  ||| |||||||||||| |||    
T  18007433 gatttcttcgtgaattacatcaaaaacaccctaggattgctttgtttcgagaagaatgaaattacaaactcaaataaagaaaacattacaaatgtttcga 18007532  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
      |||| |||||||||||||||| ||| |  ||||  |||||||||||||| |||| |||| ||||| ||||||| |||||    
T  18007533 tgtcatagacaattgttctaatattccaccattttgttggtaaaacctactgaaaatgactgaaaaa-atgctaacaataa 18007612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 291
Target Start/End: Complemental strand, 24091085 - 24090898
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||| |||||  | ||||||||||||||||||| | ||| |  |  ||||| |||  |||||||  ||| |||||||     
T  24091085 atttgcatgatttcttcgtgaattacttcaaaccc-ccctaaaattgctatgttttgagaaaactagaattacagactcaaatatagaaaacattacaag 24090987  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     || |||||||||| | ||||||||||||||||| ||  |||| ||| ||||||||| | ||||  ||| |||||||||||||||||||    
T  24090986 agtcccgaaatcataggcaattgttctaatactcttcctttttgctgctaaaacctaattaaaataactgaaaaacatgctaagaataa 24090898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 139 - 297
Target Start/End: Original strand, 17510831 - 17510987
Alignment:
Q  139 ccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcct 238  Q
    ||||||| ||||||||||||||||| |  |  ||||| |||  ||||| |  ||| |||| ||| ||||||||||||| | |||| ||||||||||||||    
T  17510831 ccctaaagttgctatgtttcgggaaaactagaattacagactcaaataga--aaacattataaaagttccgaaatcataggcaatcgttctaatactcct 17510928  T
Q  239 ctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    |  |||| | | ||||||||||| |||  |||| |||||||||||||||||||| ||||    
T  17510929 cctttttgcagctaaaacctactgaaagtgactgaaaaacatgctaagaataatgtaag 17510987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 291
Target Start/End: Complemental strand, 37527196 - 37527046
Alignment:
Q  141 ctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctct 240  Q
    |||||||||||||| || |||||||| |  ||||  |||  |||||||  ||| ||||||||||| |||||| ||| | |||||| |||||||||| |||    
T  37527196 ctaaaattgctatgctttgggaagaatagaattatagactcaaatatagaaaacattacaaatgtcccgaaaccataggcaattgctctaatactcatct 37527097  T
Q  241 gttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
      ||| |||||||||||||||||||  |||| ||||| ||| ||| |||||    
T  37527096 agtttgctggtaaaacctactaaaatagactgaaaaaaatgttaaaaataa 37527046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 111 - 276
Target Start/End: Original strand, 2638617 - 2638782
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||||| | || |||||||||||||||||||||||||||||||| |  |||||  ||  |||||||  ||| ||||||||||| || |    
T  2638617 gatttcttcgtgaattactttaagaacaccctaaaattgctatgtttcgggaagaatagtattacatacttaaatatagaaaacattacaaatgtcccaa 2638716  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaa 276  Q
    ||| || |   |||| ||||||||| | ||| ||| ||||||||| ||| |||||  |||||||||    
T  2638717 aattatagggtattgatctaatactaccctgctttgctggtaaaatctattaaaattgactaaaaa 2638782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 5856760 - 5856855
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||||| |||||| |||  ||||||| ||||||| |||||| |||  || ||||||||||||||||| |||| ||||| |||||||||||||    
T  5856760 attacaaatgtcccgaaaccataaacaattgatctaatattcctctatttagcttgtaaaacctactaaaaatgact-aaaaatatgctaagaataa 5856855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 24380675 - 24380607
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||| |||| ||||||||||||||||| ||| || |||||||||||  |||||||||||||||||||||    
T  24380675 tctttgaacttgggaacataattccttgctttgtgaagtcttctgaggcctcttgaatcttcattcttc 24380607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 24381648 - 24381580
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| |||||||| |||||||||||| |||| |||||||||   ||||||||||||||||||||    
T  24381648 tcttggaacttgggaacaaaattccttcctttgtaatgtcttctgaggactcttgaatcttcattcttc 24381580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 28904178 - 28903987
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattac-tgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||  || ||||||||||||||| || | || |||||||||||||| |||| || || ||||| ||||  |||||||  ||| ||||    
T  28904178 ccgatttgcatgatttgttcgtgaattacatcaaaa-catcatataattgctatgtttcaggaaaaatataattacatgactcaaatatagaaaacatta 28904080  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||| ||||||||||   ||||  ||||||||||||||| ||||    |||||||||||| |||| || | |  ||||| ||||||||||    
T  28904079 caaatgtcccgaaatcataagcaatgtttctaatactcctctatttttgatgtaaaacctactgaaaatgattgatgaacatactaagaataa 28903987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 291
Target Start/End: Original strand, 17835422 - 17835620
Alignment:
Q  92 ttgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatatta 191  Q
    |||| |||| ||| |||| |||||  || ||||||||| ||||| || ||||||||| ||||||||| ||||||| || |||||  ||  |||||||  |    
T  17835422 ttgctttactgatatgcatgattttttcgtgaattacaacaaaa-catcctaaaatttctatgtttcaggaagaatataattacaaacttaaatatagaa 17835520  T
Q  192 aaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||  |||||||||| ||||||||||    ||||||||||||||||| || || | || |||||||||||| |||   ||| ||||| || ||||||||||    
T  17835521 aatgttacaaatgtcccgaaatcataagaaattgttctaatactccactattctgcttgtaaaacctactgaaattaactgaaaaatatactaagaataa 17835620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 195 - 289
Target Start/End: Complemental strand, 23867945 - 23867851
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaat 289  Q
    |||||||| || |||||||||| | |||| |||||||||||||||   ||| ||| |||||||||||||||| | || |||||||| ||||||||    
T  23867945 attacaaaagtcccgaaatcataggcaatcgttctaatactcctcgtctttgctgctaaaacctactaaaaatgcctgaaaaacatactaagaat 23867851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 28621493 - 28621681
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || |||||| | |||||||| ||||||||||||||||||||  ||| |  |  ||||| |||  |||||||  ||| |||| ||    
T  28621493 gatttgcatgatttcttcgtgaatttcttcaaaaac-ccctaaaattgctatgtttcaagaaaactagaattacagactcaaatatagaaaacattaaaa 28621591  T
Q  202 atgttccgaaatcattgacaattgttctaatactc-ctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || |||||||||| | |||| ||||||||||||  ||| ||||| || ||||||||| | ||||  ||| |||||||||||||||||||    
T  28621592 aagtcccgaaatcataggcaatcgttctaatactcattctttttta-tgctaaaacctaatgaaaataactgaaaaacatgctaagaataa 28621681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 24851155 - 24851015
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgatta-ctgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||  |  ||||||||||||||| || |||||||||||||||||| |||||||| |  ||||  ||||  |||| ||  ||| ||||    
T  24851155 ccgatttgcatgatttatttgtgaattacatcaaaa-catcctaaaattgctatgttttgggaagaatagaattatatgactcaaatgtagaaaacatta 24851057  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctct 240  Q
    ||||||||| ||||||||   |||||||| ||||||||||||    
T  24851056 caaatgttctgaaatcataagcaattgttataatactcctct 24851015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 25180850 - 25180741
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| ||||| || || |||||||||| | |||||| ||||||||||||||| ||| |||||||||||||| || |  |||| |||||||||    
T  25180850 aaatatagaaaacattacgaacgtcccgaaatcataggcaattgatctaatactcctctggtttcctggtaaaacctacgaacatagactgaaaaacatg 25180751  T
Q  282 ctaagaataa 291  Q
     |||| ||||    
T  25180750 ttaaggataa 25180741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 7984890 - 7984958
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| | |||||||||||||| || | |||||||||| |||  |||||||||||||||||||||    
T  7984890 tcttggaactttggaacataattcctcccattgtaaagtcttatgatgcctcttgaatcttcattcttc 7984958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 21316680 - 21316732
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||| || |||||||| |||||||| |||||||||||||||||||||||||    
T  21316680 gatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaa 21316732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 24389645 - 24389833
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||| |||||||  |||||||| |||||||||||||||| |   | | |||  ||  |||||||  |||  |||||||    
T  24389645 atttgcatgatttcttcgtgaattacttcaaaaaacccctaaaaatgctatgtttcgggaaaactctaagtacaaactcaaatatagaaaactttacaaa 24389744  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
      | || |||| || | ||||||||||||||||||||  ||||  || ||||||||||| ||||  |||||||||| | ||||||||||    
T  24389745 attcccaaaattataggcaattgttctaatactcctcatttttgttgctaaaacctactgaaaataactaaaaaacttactaagaataa 24389833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 291
Target Start/End: Complemental strand, 26829716 - 26829486
Alignment:
Q  64 ctcttgaatcttca---ttcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgg 160  Q
    ||||||||||||||   ||||||||  ||  |||| || |||||||||| |||||| || |||||||  |||||| | |||| ||||||||||||||||     
T  26829716 ctcttgaatcttcaaaattcttcggtcgttcttgctttgccgatttgcatgatttcttcgtgaattatttcaaaacccccctcaaattgctatgtttcga 26829617  T
Q  161 gaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctac 260  Q
    ||| |  |  |||||  |   |||||||  ||| |||||||| || |||||||||| | |||| |||||| ||||||||  ||||  || ||   |||||    
T  26829616 gaaaactagaattacataatcaaatatagaaaatattacaaaagtcccgaaatcataggcaatcgttctattactcctccattttgttgctatttcctac 26829517  T
Q  261 taaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||  ||| |||||||||||||||||||    
T  26829516 taaaaaatactgaaaaacatgctaagaataa 26829486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 28275423 - 28275359
Alignment:
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaa 266  Q
    |||| |||||||||| | |||||  ||||||||||||||||||| ||||||||||||||| ||||    
T  28275423 atgtcccgaaatcataggcaattactctaatactcctctgttttcctggtaaaacctactgaaaa 28275359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 29765603 - 29765411
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | ||||||||||||||| ||| | ||| |  |  ||||  |||  |||||||  ||| ||||     
T  29765603 ccgatttgcatgatttcttcgtgaattacttcaaaatccccctaaaattgctatctttagagaaaactagaattagagactcaaatatagaaaatattaa 29765504  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgact-aaaaaacatgctaagaataa 291  Q
    ||| || || ||||||| | |||| |||||||||| | ||  |||| ||| ||||||||||| ||||  ||| ||||||||||||||||||||    
T  29765503 aaaggtaccaaaatcataggcaatcgttctaatacacttcctttttgctgctaaaacctactgaaaataactaaaaaaacatgctaagaataa 29765411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 15058822 - 15058757
Alignment:
Q  18 tggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||||| |||||||| |||| || | || |||| ||||||||| ||||||||||||||||||||||    
T  15058822 tggaacttgggaacaaaatttctccatttgtaacgtcttctgagacctcttgaatcttcattcttc 15058757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 18570418 - 18570531
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||| |||||||| |||| |||||||||||||| ||||| |  |  ||||| |||  |||||||  ||| ||||||||    
T  18570418 atttgcatgatttcttcgtgaattacttcaaaaaccccctcaaattgctatgttttgggaaaactagaattacagactcaaatatagaaaacattacaaa 18570517  T
Q  203 tgttccgaaatcat 216  Q
     |||| ||||||||    
T  18570518 agttctgaaatcat 18570531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 24109244 - 24109107
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| |  |||||||| |||||||| ||||||||||||||||||  ||||| |  |  ||||| |||  |||||||  ||| ||| ||    
T  24109244 cgatttgcatgatttctttgtgaattacttcaaaaaccccctaaaattgctatgttctgggaaaactagaattacagactcaaatatagaaaacatttca 24109145  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcct 238  Q
    || || |||||||||| |  ||||| ||||||||||||    
T  24109144 aaagtcccgaaatcataggaaattgctctaatactcct 24109107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 21230814 - 21230874
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||| |||||| || |||||||| |||||||  |||||||||||||||||||| ||||    
T  21230814 atttgcatgatttcttcgtgaattacttcaaaaaacccctaaaattgctatgtttcaggaa 21230874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 15176750 - 15176687
Alignment:
Q  19 ggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    ||||| |||||||| ||||||| |||  ||||||||| ||||  ||||||||||||||||||||    
T  15176750 ggaacttgggaacagaattcctccctatgtaaagtctcctgaggcctcttgaatcttcattctt 15176687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 19785101 - 19785034
Alignment:
Q  16 cttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||||||  |||||||| |||| || || |||||||||||| |||  |||||||||||||||||||||    
T  19785101 cttggaatttgggaacaaaatttctcccgtcgtaaagtcttatgaggcctcttgaatcttcattcttc 19785034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 24520211 - 24520152
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcg 159  Q
    |||||||||| || ||  || |||||||| |||||||| |||||||||||||||||||||    
T  24520211 ccgatttgcatgacttattcgtgaattacttcaaaaaccccctaaaattgctatgtttcg 24520152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 239
Target Start/End: Complemental strand, 25481716 - 25481577
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccc-taaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||||||| |||||| || |||||||| |||||| | ||| | |||||| |||||||| |||| |  |  ||||| |||  |||||||  ||| |||||    
T  25481716 cgatttgcatgatttcttcgtgaattacttcaaaaccccccctcaaattgatatgtttctggaaaactagaattacagactcaaatatagaaaacattac 25481617  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    ||| ||| ||||||||| | |||| |||||||||||||||    
T  25481616 aaaagtttcgaaatcataggcaatcgttctaatactcctc 25481577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 22501609 - 22501671
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttca 77  Q
    ||||||||| |||||||| ||||||| |||  |||| |||||||||  |||||||||||||||    
T  22501609 tcttggaacttgggaacagaattcctccctctgtaatgtcttctgaggcctcttgaatcttca 22501671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 24091714 - 24091768
Alignment:
Q  112 atttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    ||||| || |||||||  |||| ||||||||||||||||| ||||||||||||||    
T  24091714 atttcttcgtgaattagttcaagaacaccctaaaattgctttgtttcgggaagaa 24091768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 15557296 - 15557340
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||    
T  15557296 tgaattacatcaaaa-caccctaaaattactatggttcgggaagaa 15557340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 18446975 - 18446879
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||| ||||||||||||| |  ||| |||||||||||||||  |||| ||| |||| ||||||  |||  ||| ||||||||| ||| |||||    
T  18446975 attacaaaagttccgaaatcataggaaatggttctaatactcctcctttttgctgctaaatcctactggaaataactgaaaaacatggtaaaaataa 18446879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 291
Target Start/End: Original strand, 19704983 - 19705063
Alignment:
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| | |||| ||||||||||||||   || | ||| ||||||||||| |||| |||| |||||||| ||||||||||    
T  19704983 aatcataggcaatcgttctaatactccttctttatgctgttaaaacctactgaaaatgactgaaaaacatactaagaataa 19705063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 23868141 - 23868085
Alignment:
Q  27 ggaacataattccttccttc-gtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    |||||||||||||| ||| | ||||||||| ||||  ||||||||||||||||||||    
T  23868141 ggaacataattcctccctactgtaaagtctcctgagccctcttgaatcttcattctt 23868085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 291
Target Start/End: Complemental strand, 24382046 - 24382006
Alignment:
Q  251 taaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||||| |||| |||||||| |||||||||||||||    
T  24382046 taaaacctactgaaaatgactaaaatacatgctaagaataa 24382006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 291
Target Start/End: Original strand, 21848499 - 21848703
Alignment:
Q  87 tgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaata 186  Q
    |||| |||| || |||||||||| |||||| |  |||||||||||||||||||||||||||| ||||||||| |||||||||| || |  |||  |||||    
T  21848499 tgtctttgctttgccgatttgcatgatttctttgtgaattacatcaaaaacaccctaaaatttctatgtttcaggaagaacataataatagacctaaata 21848598  T
Q  187 tattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaag 286  Q
    ||  |||  ||||||||||  |||||||||   |||||| ||||||||||||||||||| ||  ||| ||||| ||||||||||| ||||||||||||||    
T  21848599 tagaaaacgttacaaatgtgtcgaaatcataagcaattgctctaatactcctctgttttgctaataacacctattaaaaacgactgaaaaacatgctaag 21848698  T
Q  287 aataa 291  Q
    |||||    
T  21848699 aataa 21848703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 121 - 291
Target Start/End: Original strand, 16363530 - 16363700
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||| |  ||||  |||| ||||| |  ||| | |||||||||||||||||||| | |    
T  16363530 tgaattacatcaaaaacaccctaaaaatgacatgtttcgggaagaatagaattatagacacaaataaagaaaagaatacaaatgttccgaaatcataggc 16363629  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| |||||||||||||| ||||  |||||||| ||||| |||| ||||  |||||||||||| |||||    
T  16363630 aattgatctaatactcctctattttgttggtaaaaactactgaaaatgactggaaaacatgctaaaaataa 16363700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 288
Target Start/End: Complemental strand, 27116433 - 27116246
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| |  |||||||||| ||||| |||||| |||||||||||||||||||||| |  |||||  ||  |||||||  ||| |||||    
T  27116433 ccgatttgcatgatttctttgtgaattacataaaaaa-accctagaattgctatgtttcgggaagaatagaattacatactaaaatatagaaaacattac 27116335  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaa 288  Q
    |||||| || ||||||| |||||||  |||||||||| || |||||  ||||||||||||||||||| || | ||||||||| ||||||    
T  27116334 aaatgtcccaaaatcatagacaatttctctaatactcatccgtttttatggtaaaacctactaaaaatgattgaaaaacatgttaagaa 27116246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 121 - 290
Target Start/End: Original strand, 33192259 - 33192428
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| |  ||||| |||  |||||||  ||| ||||||||  |  ||||||| | |||    
T  33192259 tgaattacttcaaaaacaccctaaaattgctatgtttagggaagaatagaattacagactcaaatatagaaaacattacaaacatctcgaaatcgtagac 33192358  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    ||||  |||||||||  |||| ||| ||||||||||||||| |||  |||| ||||||||||||||||||    
T  33192359 aattaatctaatacttttctgctttgctggtaaaacctactgaaattgactgaaaaacatgctaagaata 33192428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 101 - 297
Target Start/End: Original strand, 44797004 - 44797201
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| || ||| || ||||||||||||| |||||||||||||| |||||||||||||| |   ||||||| |||  |||||||  ||| ||||||    
T  44797004 cgatttgcatgacttcttcgtgaattacatcaagaacaccctaaaattactatgtttcgggaaaactctgattacagactcaaatataaaaaacattaca 44797103  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctact-aaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    |||||   |||||||| | |||||  ||||||||| |||||||||| | || ||||||| |  |||| |||| |||||||||||||||||||| ||||    
T  44797104 aatgtcttgaaatcataggcaattactctaatacttctctgttttattcgtgaaacctattggaaaaagactgaaaaacatgctaagaataatgtaag 44797201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 22626365 - 22626174
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| ||| |  || ||||||||||||| |||||||||||||||| ||||||| |||| |   ||||||| |||  |||||||  ||| |||||    
T  22626365 ccgatttgcatgatcttttcgtgaattacatcaagaacaccctaaaattgccatgtttcaggaaaactctgattacagactcaaatatagaaaacattac 22626266  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| | || ||||||| |  || |  ||||||||||||||||||| ||||||||| ||||||||||  | | |||||||||||||||||||    
T  22626265 aaatttcccaaaatcataggtaaattctctaatactcctctgttttgctggtaaaagctactaaaaaaaattcaaaaacatgctaagaataa 22626174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 291
Target Start/End: Complemental strand, 15571878 - 15571708
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    |||||||| |||| ||| ||||||||||| ||||||| |||||||| |  |||||  ||  |||||||  ||| |||||||| || |  ||||||| |||    
T  15571878 tgaattacttcaagaactccctaaaattgttatgttttgggaagaatagaattacatacttaaatatagaaaatattacaaacgtcctaaaatcatagac 15571779  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| ||||||||||||||| ||| || ||||||||||||||||  |||| ||||||||||||| |||||    
T  15571778 aattgatctaatactcctctgctttgctagtaaaacctactaaaattgactgaaaaacatgctaaaaataa 15571708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 97 - 291
Target Start/End: Complemental strand, 18527710 - 18527516
Alignment:
Q  97 ttaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaat 196  Q
    ||||||||||||| |||||| || |||||||| |||||||| ||||||||||||||||||||||||| |  |  ||||| |||  |||||||  ||| ||    
T  18527710 ttaccgatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaagat 18527611  T
Q  197 tacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||  | |||||||||| | ||||  ||||||||||||||  |||| | | ||||||||| | |||| || | ||||| |||||||||||||    
T  18527610 tacaaaactcccgaaatcataggcaatcattctaatactcctcctttttgccgctaaaacctattgaaaatgagtgaaaaagatgctaagaataa 18527516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 284
Target Start/End: Original strand, 35133772 - 35133954
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    ||||| || |||||| || ||||||||||||| |||||||||||||||||||||||| | || |   |||||||  ||  |||||||  ||| |||||||    
T  35133772 gattttcatgatttcttcgtgaattacatcaagaacaccctaaaattgctatgtttcagaaaaattctgattacaaactcaaatatagaaaacattacaa 35133871  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgcta 284  Q
    ||||||| ||||| | | |||||  | |||||||||||  ||||  ||||||||||||||||||| |||| ||||||||||||    
T  35133872 atgttccaaaatcgtaggcaattactttaatactcctccattttgttggtaaaacctactaaaaaagactgaaaaacatgcta 35133954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 287
Target Start/End: Complemental strand, 14235492 - 14235308
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattac-tgacagaaatatattaaaaattacaa 201  Q
    ||||||| |||||| || ||||||||||||||| ||||||||||||||||||||||||||| || || ||||| ||||  |||||||  ||| |||||||    
T  14235492 atttgcatgatttcttcgtgaattacatcaaaa-caccctaaaattgctatgtttcgggaataatataattacatgactcaaatatagaaaacattacaa 14235394  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaaga 287  Q
    |||| || |||||||   |||||| ||||||||||| |  || |    | ||||||||||||||| |||| |||||||||||||||    
T  14235393 atgtcccaaaatcataagcaattggtctaatactccaccattctggatgaaaaacctactaaaaatgactgaaaaacatgctaaga 14235308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 291
Target Start/End: Original strand, 16114692 - 16114877
Alignment:
Q  106 tgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgt 205  Q
    |||| |||||| |||||||||||||||| |||| ||||||||||||||||||  |||||||||  |||||  |   || ||||  ||| |||||||||||    
T  16114692 tgcatgatttcttcatgaattacatcaagaacatcctaaaattgctatgtttttggaagaacaaaattacatattcaattatagaaaacattacaaatgt 16114791  T
Q  206 tccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     || ||||||| |  ||||| |||||||||| |||||| | |||||||||| | || |||| || | |||||||||||||||||||    
T  16114792 ccctaaatcatgggaaattgctctaatactcatctgttatgctggtaaaacatgctgaaaatgattgaaaaacatgctaagaataa 16114877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 289
Target Start/End: Original strand, 22621681 - 22621868
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacac--cctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||| |||||| || |||||||||||||||||||  |||| ||||| ||||||||||||||||  | ||||| |||   |||| |  ||| ||||||    
T  22621681 atttgcatgatttcttcgtgaattacatcaaaaacacatcctagaattggtatgtttcgggaagaatgtaattaccgactcgaataaagaaaacattaca 22621780  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaat 289  Q
    ||| | | |||||||| | |||||| |||||| |||||||  ||| |||||||| ||||||||||| |||| |||||||||||||||||    
T  22621781 aatttcctgaaatcataggcaattgatctaattctcctcttctttgctggtaaa-cctactaaaaatgactgaaaaacatgctaagaat 22621868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 103 - 291
Target Start/End: Complemental strand, 26647564 - 26647377
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||||||||| |  |||||| ||||||||||||| |||||||| |   ||||||| |||  |||||||  ||| ||||||||    
T  26647564 atttgcatgatttcttcgtgaattacataatgaacaccttaaaattgctatgattcgggaaaactctgattacagactcaaatatagaaaacattacaaa 26647465  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||   ||||||||| | || ||| ||||||||||||| |||||  |||||||||||||| |||| |||| ||||| |||||||||||||    
T  26647464 tgcctcgaaatcataggca-ttgctctaatactcctccgttttgttggtaaaacctactgaaaaagactgaaaaatatgctaagaataa 26647377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 291
Target Start/End: Complemental strand, 9783165 - 9782999
Alignment:
Q  125 ttacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaatt 224  Q
    ||||||||| |||||| | ||||| ||||||||| ||||||| |  ||||| |||  |||||||  ||| |||||| |||||||||||| || | |||||    
T  9783165 ttacatcaagaacaccattaaatttctatgtttcaggaagaatagaattacagactcaaatatagaaaatattacatatgttccgaaataataggcaatt 9783066  T
Q  225 gttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | ||||||||| ||||| ||| | |||||||||||||||||  || | ||||||||||||| |||||    
T  9783065 gctctaatacttctctggtttgcaggtaaaacctactaaaatagattgaaaaacatgctaataataa 9782999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 289
Target Start/End: Complemental strand, 22426765 - 22426537
Alignment:
Q  64 ctcttgaatcttca---ttcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgg 160  Q
    ||||||||||||||   |||||||| |||  |||  || |||||||||| |||||| || |||||||  |||||||  |||||||||||||||||||| |    
T  22426765 ctcttgaatcttcacaattcttcggatgttcttgattttccgatttgcatgatttcttcgtgaattatttcaaaaaacccctaaaattgctatgtttcag 22426666  T
Q  161 gaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctac 260  Q
    |||||  |  ||||| |||  |||||||  ||| |||||||| || |||||||||| | |||| |||||||||||||||  |||| ||| ||   |||||    
T  22426665 gaagactagaattacagactcaaatatagaaaacattacaaaagtcccgaaatcataggcaatcgttctaatactcctcctttttgctgctatttcctac 22426566  T
Q  261 taaaaacgactaaaaaacatgctaagaat 289  Q
    |||||   ||| |||||||||||||||||    
T  22426565 taaaataaactgaaaaacatgctaagaat 22426537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 15542519 - 15542328
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||  |||||| || |||||||| |||||||| || ||||||||||||||||||| || |  |  |||||  ||  | |||||  ||| |||||    
T  15542519 ccgatttgcgtgatttcttcgtgaattacttcaaaaaccccttaaaattgctatgtttcggaaaaactagaattacatactcagatatagaaaacattac 15542420  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||| | |||| ||||||||||||||   |||| ||| ||||||||||| |||| |||| ||||||||| |||||||||    
T  15542419 aaaagtcccgaaatcataggcaatcgttctaatactcctactttttgctgctaaaacctactgaaaatgactgaaaaacatgttaagaataa 15542328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 265
Target Start/End: Original strand, 24282899 - 24283053
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||||||| |||||||||||||||||||| ||||||||||| |  ||||| |||| |||||||  ||| |||| |||  | | ||    
T  24282899 gatttcttcgtgaattacatcaagaacaccctaaaattgctatggttcgggaagaatagaattacagacacaaatatagaaaacattaaaaaattcctga 24282998  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaa 265  Q
    ||| || |  ||||| ||||||||||||||| ||| |||||||||| || |||||    
T  24282999 aattataggaaattgatctaatactcctctgctttgctggtaaaacttattaaaa 24283053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 25402635 - 25402455
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||||| |||||| | ||||||||||||||| |||| |||| |  |  ||||  |||  |||||||  ||| |||||||| || | ||    
T  25402635 gatttcttcgtgaattacttcaaaacccccctaaaattgctatatttcaggaaaactagaattagagactcaaatatagaaaacattacaaaagtcctga 25402536  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||  ||||| |||||||||||||||| |||| ||| |||| ||||||||||   ||| |||||||||||||||||||    
T  25402535 aatcataaacaatcgttctaatactcctcttttttgctgctaaatcctactaaaataaactgaaaaacatgctaagaataa 25402455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 266
Target Start/End: Complemental strand, 15527004 - 15526841
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| |  ||||||||| ||| |||| ||||||||||||||||||| |||| |   | ||||| |||  |||||||  ||| ||||||||    
T  15527004 atttgcatgatttctttgtgaattacaacaagaacatcctaaaattgctatgtttcaggaaaactctaattacagactaaaatatagaaaacattacaaa 15526905  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaa 266  Q
    |||  ||||||||| | |||||  ||||||||||| ||||||| ||||||||| ||||| ||||    
T  15526904 tgtctcgaaatcataggcaattactctaatactcccctgttttgctggtaaaatctactgaaaa 15526841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 16786304 - 16786238
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||||||| |||||| || ||||||| |||||||||||| |||||||||||||||||||||||||    
T  16786304 ccgatttgcatgatttcttcgtgaattagatcaaaaacaccataaaattgctatgtttcgggaagaa 16786238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 125 - 291
Target Start/End: Original strand, 22665697 - 22665863
Alignment:
Q  125 ttacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaatt 224  Q
    |||| |||| ||| ||||||||||||||||||||| |||||| |  |||||  ||  |||||||  ||| ||||||||||| | |||||||| | |||||    
T  22665697 ttacttcaagaaccccctaaaattgctatgtttcgagaagaatagaattacaaactcaaatatagaaaacattacaaatgtcctgaaatcataggcaatt 22665796  T
Q  225 gttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
      |||| |||||| ||| ||| || ||||||| ||||||||   ||| |||||||||||||||||||    
T  22665797 tctctagtactccgctggtttgctagtaaaacatactaaaataaactgaaaaacatgctaagaataa 22665863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 297
Target Start/End: Original strand, 22624502 - 22624699
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||  |||||||||| ||||||||||| || |  |  ||||| |||  |||||||  ||| ||||     
T  22624502 ccgatttgcatgatttcttcgtgaattacttcaaaaatcccctaaaatttctatgtttcggaaaaactagaattacagactaaaatatagaaaacattaa 22624601  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||  || |||||||||| | ||||  || |||||||||||  |||| ||| |||| ||||||||||   ||| |||||||||||||||||||| ||||    
T  22624602 aagagtcccgaaatcataggcaatcattttaatactcctcctttttgctgctaaatcctactaaaataaacttaaaaacatgctaagaataatgtaag 22624699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 729117 - 729213
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||| || | |||||||| |||||| |||||||||||||||  |||| ||| ||||||||||| |||| |||| |||| ||||||||||||||    
T  729117 attacaaaagtcctgaaatcatagacaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaagcatgctaagaataa 729213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 26101749 - 26101877
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||| |||||||||||||||||| |||||||||||||||||||||| |  |||||  |    ||||||  ||| ||||||||    
T  26101749 atttgcatgatttcttcgtgaactacatcaaaaacaccctataattgctatgtttcgggaagaatagaattacatattccaatatagaaaacattacaaa 26101848  T
Q  203 tgttccgaaatcattgacaattgttctaa 231  Q
    | | |||||||||| || |||||||||||    
T  26101849 tatcccgaaatcatagataattgttctaa 26101877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 12210233 - 12210348
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| ||||| |||| || ||||||  ||||||||||||||  |||| ||| ||||||||||| |||  |||| |||||||||    
T  12210233 aaatatagaaaacattacaaaagttccaaaattatagacaatctttctaatactcctcctttttgctgctaaaacctactgaaattgactgaaaaacatg 12210332  T
Q  282 ctaagaataatttaag 297  Q
    ||||||||||| ||||    
T  12210333 ctaagaataatgtaag 12210348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 18734796 - 18734605
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||| ||| |||||||||||||||| |||| |  |  |||||  ||  ||||||   ||| |||||    
T  18734796 ccgatttgcatgatttcttcgtgaattacttcaaaaacccccaaaaattgctatgtttcaggaaaactagaattacatactcaaatattgaaaacattac 18734697  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| ||  | ||||||| | |||| |||||||||||||||  |||| ||| |||| |||||||||    ||| |||||||||||||||||||    
T  18734696 aaaagtctcaaaatcataggcaatcgttctaatactcctcctttttgctgttaaatcctactaaagtaaactgaaaaacatgctaagaataa 18734605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 285
Target Start/End: Original strand, 21450655 - 21450838
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || |||||||| |||||| | |||||||||||||||||||||| || |  |  |||||  ||  |||||||  ||| |||||||    
T  21450655 gatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgtttcggtaaaattagaattacaaactcaaatatagaaaacattacaa 21450754  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaa 285  Q
    |  | |||||||||| | ||||  ||| ||||||||||  |||| ||| ||||||||||| |||| |||| | |||||||||||    
T  21450755 agttcccgaaatcataggcaatctttccaatactcctcctttttgctgctaaaacctactgaaaatgactgagaaacatgctaa 21450838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 22507585 - 22507522
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| || |||||||| |||||||| |||||||||||||||||||||||||    
T  22507585 ccgatttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaa 22507522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 297
Target Start/End: Original strand, 28009635 - 28009829
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatg-attactgacagaaatatattaaaaattacaa 201  Q
    ||||||| |||||| || ||| ||||  ||||||| ||||||||||||||||||||||||| |||  | |||||  ||  |||||||  ||| |||||||    
T  28009635 atttgcatgatttcttcgtgatttactccaaaaaccccctaaaattgctatgtttcgggaa-aactggaattacatactcaaatatagaaaagattacaa 28009733  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||||  |||||| || | |||||| |||||| ||||||  |||| ||| |||||| ||   |||| |||| |||||||||||||||||||| ||||    
T  28009734 atgtctcgaaattataggcaattgctctaatgctcctcctttttgctgctaaaacttagcgaaaatgactgaaaaacatgctaagaataatgtaag 28009829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 291
Target Start/End: Complemental strand, 15158997 - 15158808
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatg-attactgacagaaatatattaaaaattacaa 201  Q
    ||||||| |||||| || |||||||| | |||||| ||||||||||||||||||| ||||| ||| || |||||  |   |||||||  ||| |||||||    
T  15158997 atttgcatgatttcttcgtgaattactttaaaaaccccctaaaattgctatgttttgggaa-aacttgaattacaaattcaaatataaaaaacattacaa 15158899  T
Q  202 atgttccgaaatcattgacaa-ttgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || ||||||| || | ||| || ||||||||||||||  |||| ||| |||| |||||| ||||  ||| |||||||||||||||||||    
T  15158898 aagtcccgaaattataggcaattttttctaatactcctcctttttgctgctaaatcctacttaaaataactgaaaaacatgctaagaataa 15158808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 266
Target Start/End: Original strand, 26022281 - 26022447
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| ||||||  | |||||||| ||||||||  | ||||||||||||||||| ||||||  |  ||||  |||  |||||||  ||| |||||    
T  26022281 ccgatttgcatgatttctccgtgaattacttcaaaaacctcttaaaattgctatgtttcaggaagactagaattaaagactcaaatatagaaaacattac 26022380  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaa 266  Q
    |||||| ||||||||||   |||||| || |||||||| |  |||| ||||||||||||||| ||||    
T  26022381 aaatgtcccgaaatcataagcaattgctccaatactccacctttttgctggtaaaacctactgaaaa 26022447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 291
Target Start/End: Complemental strand, 16915446 - 16915215
Alignment:
Q  64 ctcttgaatcttca---ttcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgg 160  Q
    ||||||||||||||   |||||||| |||  |||  || |||||||||| |||||| || |||||||| |||||||  | || ||||||||||||||||     
T  16915446 ctcttgaatcttcacaattcttcggttgttcttgattttccgatttgcatgatttcttcgtgaattacttcaaaaaacctctcaaattgctatgtttcga 16915347  T
Q  161 gaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctac 260  Q
    ||| |  |  |||||| ||  |||||||  ||| |||||||| ||||| ||||||| | |||| |||||||||||||||  ||||  || ||   |||||    
T  16915346 gaaaagtagaattacttactcaaatatagaaaacattacaaaagttccaaaatcataggcaatcgttctaatactcctcctttttgttgttattccctac 16915247  T
Q  261 t-aaaaacgactaaaaaacatgctaagaataa 291  Q
    | |||||  ||||||||||||| |||||||||    
T  16915246 taaaaaaatactaaaaaacatgttaagaataa 16915215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 18098364 - 18098295
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaa 264  Q
    |||||||||||  ||||||||| | |||||| ||||||||||||||| ||| ||||||||||||||||||    
T  18098364 attacaaatgtctcgaaatcataggcaattgatctaatactcctctggtttgctggtaaaacctactaaa 18098295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 14782416 - 14782607
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||  || |||||||||||||||||||||| |  |  ||||||||| ||||||||  ||| |||||    
T  14782416 ccgatttgcatgatttcttcgtgaattacttcaaaaatcccataaaattgctatgtttcgggaaaactagaattactgactgaaatatagaaaacattac 14782515  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| ||  | ||||| |   || | || |||||| |||||  |||| ||| ||||||||| | |||  || | |||||||||||||||||||    
T  14782516 aaaagtctcaaaatcttatgcagtcgtcctaatagtcctcctttttgctgctaaaacctattgaaattgagtgaaaaacatgctaagaataa 14782607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 292
Target Start/End: Original strand, 16180605 - 16180795
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    |||||||||  ||||| || |||||||| |||||||| ||||||||||| |||||||  |||| |  |  ||||| |||  ||||| |  ||| ||||||    
T  16180605 cgatttgcacaatttcttcgtgaattacttcaaaaaccccctaaaattgttatgttttaggaaaattagaattacagactcaaatacagaaaacattaca 16180704  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataat 292  Q
    || || |||||||||| | |||| |||||||||||||||  ||||  || ||||  ||||| ||||  ||| ||||||||||||||||||||    
T  16180705 aaagtcccgaaatcataggcaat-gttctaatactcctcctttttgttgctaaactctactgaaaataactgaaaaacatgctaagaataat 16180795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 7881684 - 7881738
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgttt 157  Q
    ||||||| |||||| || |||||||||||||||||| ||||||||||||||||||    
T  7881684 atttgcatgatttcttcgtgaattacatcaaaaacatcctaaaattgctatgttt 7881738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 15811653 - 15811540
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || ||||||||||||| ||| |||||||||||||||||||| |||| |   ||| ||| |||  |||||||  ||| ||||||||    
T  15811653 atttgcatgatttcttcgtgaattacatcaagaaccccctaaaattgctatgtttcaggaaaactctgagtacagactcaaatatagaaaacattacaaa 15811554  T
Q  203 tgttccgaaatcat 216  Q
    ||| | ||||||||    
T  15811553 tgtccagaaatcat 15811540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 291
Target Start/End: Original strand, 18827284 - 18827473
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| | |||| ||||||||||| |||||||| || |||||||| ||||||| ||||| |  |  ||||  |||  |||||||  |||||||||||    
T  18827284 gatttgcatgttttcttcatgaattacttcaaaaactccataaaattgatatgttttgggaaaactagaattatagactcaaatatagaaaaaattacaa 18827383  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || |||||||||| | ||||  ||||||||||| ||  || | ||| ||| ||||| | ||||  ||| ||||||||| |||||||||    
T  18827384 aagtcccgaaatcataggcaatcattctaatactcatcctttctcctgctaagacctaattaaaataactgaaaaacatgttaagaataa 18827473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 288
Target Start/End: Original strand, 18832104 - 18832289
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||| ||| |||||||| |||| |||||||||||||| ||||| | ||  ||||| |||  ||||||   ||| ||||||||    
T  18832104 atttgcatgatttcttcgtgaagtacttcaaaaacccccttaaattgctatgttttgggaaaatcagaattacagactcaaatatggaaaacattacaaa 18832203  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaa 288  Q
     || | |||||||| |  ||| |||||||||||||||  |||| ||| ||| ||||| | |||   ||| ||||||||||||||||    
T  18832204 agtcctgaaatcataggtaatcgttctaatactcctcctttttgctgctaagacctaattaaagtaactgaaaaacatgctaagaa 18832289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 289
Target Start/End: Original strand, 20107741 - 20107929
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || ||| |||| |||||||| ||||||||||||||||||||||||| |  || |||||  ||  |||||||  ||| |||||    
T  20107741 ccgatttgcatgatttcttcgtgatttacttcaaaaac-ccctaaaattgctatgtttcgggaaaactataattacaaactcaaatatagaaaacattac 20107839  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaat 289  Q
    ||| ||||| |||||||    | | |||||||||||||||  |||| ||| ||   ||||||||||   ||  |||||||||||||||||    
T  20107840 aaaagttccaaaatcataagtagtcgttctaatactcctcctttttgctgctatttcctactaaaataaacagaaaaacatgctaagaat 20107929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 21663194 - 21663110
Alignment:
Q  207 ccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||||| | |||| ||||||||||| |||  ||||  || ||||||||||| |||| |||| |||||||||||||||||||    
T  21663194 ccgaaatcataggcaatcgttctaatacttctcctttttgatgttaaaacctactgaaaatgactgaaaaacatgctaagaataa 21663110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 25959666 - 25959473
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| || ||||||| ||||| |||||| ||||||||||||||||| ||||||| |  |  |  |||  |||||||  ||| | |||||    
T  25959666 gatttgcttgatttcttcgtgaattaaatcaagaacaccataaaattgctatgtttcaggaagaatagaa--agagactcaaatatagaaaataatacaa 25959569  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    || |  ||||||||| |  | ||| |||||||||| | |||||| | ||||||||||||| |||| |||| | |||||| ||||||||||| ||||    
T  25959568 atatctcgaaatcataggtagttgatctaatactcatatgttttgccggtaaaacctactgaaaaagactgagaaacatcctaagaataatgtaag 25959473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 12011296 - 12011205
Alignment:
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    |||||||| ||||||||| | |||||| |||||||||| |  ||||| ||||||||||||||| |||| |  | ||||||||||||| ||||    
T  12011296 caaatgtttcgaaatcataggcaattgctctaatactcattcgttttgctggtaaaacctactgaaaatgtgtgaaaaacatgctaaaaata 12011205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 16785721 - 16785655
Alignment:
Q  190 taaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacc 257  Q
    |||| ||||||||||| || | ||||| | |||||||||||||||||||| |||||||||||||||||    
T  16785721 taaatattacaaatgtccc-atatcataggcaattgttctaatactcctccgttttactggtaaaacc 16785655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 291
Target Start/End: Original strand, 17444985 - 17445143
Alignment:
Q  133 aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaat 232  Q
    |||||| |||||||||||||| | || ||||||| |  ||||| |||  |||||||  ||| | ||||||| | || |||||||   |||||| ||||||    
T  17444985 aaaacatcctaaaattgctatttctcaggaagaatagaattacagactcaaatataaaaaacaatacaaatatcccaaaatcataagcaattgatctaat 17445084  T
Q  233 actcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     ||| ||| || | || |||||||||||||||||  ||| ||||||||| |||||||||    
T  17445085 gctcatctattatgcttgtaaaacctactaaaaataactgaaaaacatgttaagaataa 17445143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 24282786 - 24282844
Alignment:
Q  25 tgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||||||||||||||| |||| |||||||||| |||  |||||||||| ||||||||||    
T  24282786 tgggaacataattcctccctttgtaaagtcttatgaggcctcttgaatattcattcttc 24282844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 21333278 - 21333221
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgttt 157  Q
    |||||||||| |||||| || |||||||| |||||| | |||||||||||||||||||    
T  21333278 ccgatttgcatgatttcttcgtgaattacttcaaaacccccctaaaattgctatgttt 21333221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 23035128 - 23035068
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||| |||||| || ||| ||||||||| ||||||||||||||| |||||||||||||    
T  23035128 gatttgcatgatttcttcgtga-ttacatcaagaacaccctaaaattggtatgtttcgggaa 23035068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 291
Target Start/End: Original strand, 27973319 - 27973380
Alignment:
Q  230 aatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||||||  |||| ||| ||||||||||| |||| |||| |||||||||||||||||||    
T  27973319 aatactcctcctttttgctgttaaaacctactgaaaatgactgaaaaacatgctaagaataa 27973380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 16114575 - 16114643
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| |||||||| || | || |||| |||||||||||| |  |||||||||||||||||||||    
T  16114575 tcttggaacttgggaacaaaaatactccctttgtaaagtcttctaaggcctcttgaatcttcattcttc 16114643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 12011506 - 12011439
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    |||||| ||||| ||||| |||||||||||  |||||||||| |||  ||| ||||||||||||||||    
T  12011506 tcttgggacctgagaacaaaattccttcctctgtaaagtcttttgaggcctattgaatcttcattctt 12011439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 26581483 - 26581525
Alignment:
Q  124 attacatcaaaaacaccctaaaattgctatgtttcgggaagaac 167  Q
    |||||||||||| |||||||||||||||||||||| ||||||||    
T  26581483 attacatcaaaa-caccctaaaattgctatgtttcaggaagaac 26581525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 15542630 - 15542564
Alignment:
Q  16 cttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    |||||||| ||||||||||| |||| |||  |||||||||  |||  ||||||||||||||||||||    
T  15542630 cttggaacttgggaacataagtcctccctatgtaaagtctcttgaggcctcttgaatcttcattctt 15542564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 26652544 - 26652651
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||| |||  |||||||||| || |||||||   ||||| ||||||||||||||| || ||  | | ||||||||||||||  ||| |||||||||    
T  26652544 aaatatataaaacgttacaaatgtcccaaaatcataagcaatttttctaatactcctctattata--gattaaacctactaaaaataactgaaaaacatg 26652641  T
Q  282 ctaagaataa 291  Q
    |||| |||||    
T  26652642 ctaaaaataa 26652651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 27911951 - 27912008
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttc 158  Q
    |||||||||| |||||  || ||||||||||||||| ||||||| ||||||||||||||    
T  27911951 ccgatttgcatgattttttcttgaattacatcaaaa-caccctagaattgctatgtttc 27912008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 44796892 - 44796950
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatc 73  Q
    ||||||||| |||||||||||||||| |||  |||| |||||||||  |||||||||||    
T  44796892 tcttggaacttgggaacataattcctccctctgtaacgtcttctgaggcctcttgaatc 44796950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 7881580 - 7881636
Alignment:
Q  27 ggaacataattccttccttcgtaaagtcttctgacacc-tcttgaatcttcattctt 82  Q
    |||||||||||||| |||| |||||||||| |||  || ||||||||||||||||||    
T  7881580 ggaacataattcctccctttgtaaagtcttatgaggccttcttgaatcttcattctt 7881636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 15527117 - 15527049
Alignment:
Q  16 cttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttcg 84  Q
    |||||||| |||||||||||||||| |||  |||| |||| |||| ||||||||| |||| | ||||||    
T  15527117 cttggaacttgggaacataattcctccctctgtaacgtctgctgagacctcttgagtctttaatcttcg 15527049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 15572011 - 15571943
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||| |||| |||||||| ||||||| |||  ||||| |||| |||  |||||||||||||||||||||    
T  15572011 tcttcgaacttgggaacagaattcctccctgtgtaaactcttttgatgcctcttgaatcttcattcttc 15571943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 17365752 - 17365848
Alignment:
Q  195 attacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| |||||||||||||||||  ||||||  ||||||||| |||| ||||    | |||||||||| |||| |||||||||| || | ||||||||    
T  17365752 attaaaaatgttccgaaatcataaacaatttctctaatacttctctattttggatgaaaaacctactgaaaatgactaaaaaatattccaagaataa 17365848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 35133659 - 35133727
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| ||||||||||||||   |||| |||| |||||||||  |||||||||| |||| |||||    
T  35133659 tcttggaacttgggaacataattctaccctttgtaacgtcttctgaggcctcttgaatattcaatcttc 35133727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 291
Target Start/End: Complemental strand, 88655 - 88456
Alignment:
Q  92 ttgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatatta 191  Q
    ||||||| |||||||||| |||||| |  ||||||||||||| |||| ||||||||| ||||||| ||| ||||| || ||||| ||| ||||||||  |    
T  88655 ttgcattgccgatttgcatgatttctttgtgaattacatcaagaacatcctaaaatttctatgttccggaaagaatataattacagactgaaatatagaa 88556  T
Q  192 aaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    || | ||||||||| || ||||||| |||||||| ||||| |||||||| ||||  |||||||||||||| |||| || | |||||||||||||||||||    
T  88555 aacaatacaaatgtcccaaaatcatagacaattgctctaagactcctctatttttttggtaaaacctactgaaaatgattgaaaaacatgctaagaataa 88456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 88758 - 88690
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| ||||||||||||| || |||  ||||||||||||||   || |||||||||||||||||    
T  88758 tcttggaacttgggaacataatttctccctctgtaaagtcttctgagggcttttgaatcttcattcttc 88690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 111 - 291
Target Start/End: Original strand, 22246894 - 22247073
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||||||||||||||| ||||||||| ||||||||  |||||||||  ||||| |||  |||||||  ||| ||||||||||| || |    
T  22246894 gatttcttcgtgaattacatcaaaaacatcctaaaatttctatgttttaggaagaacagaattacagacttaaatatagaaaacattacaaatgtcccaa 22246993  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| | |||||| |||||||||||||| |||| ||||||||||||||| |||| |||| ||||| |||||||||||||    
T  22246994 aatcatagtcaattgctctaatactcctctattttgctggtaaaacctactgaaaatgactgaaaaa-atgctaagaataa 22247073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 291
Target Start/End: Complemental strand, 3114919 - 3114729
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| || ||||| ||||||| ||||||||||||||||||||||||||||| |   ||||||   ||  |||||||  ||| ||| ||    
T  3114919 cgatttgcatgatttcttcgtgaataacatcaagaacaccctaaaattgctatgtttcgggaaaattctgattaaaaactcaaatatagaaaacatttca 3114820  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| |  ||||||||| | |||||  ||||||||||||||||||| |||||||||||||||  ||| |||| |||||||||||||||||||    
T  3114819 aatatctcgaaatcataggcaattactctaatactcctctgttttgctggtaaaacctactgtaaaagactgaaaaacatgctaagaataa 3114729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 291
Target Start/End: Complemental strand, 22470581 - 22470422
Alignment:
Q  132 aaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaa 231  Q
    ||||||| |||||||||||||||||||  ||||||||  ||||| |||  |||||||  ||| |||||||||||  |||||||||   |||||| |||||    
T  22470581 aaaaacatcctaaaattgctatgtttcacgaagaacagaattacagactcaaatataaaaaacattacaaatgtcacgaaatcatatgcaattgctctaa 22470482  T
Q  232 tactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     ||||||||||||| |||||||||| |||| |||| |||| |||||||||||||||||||    
T  22470481 cactcctctgttttgctggtaaaacatactgaaaatgactgaaaaacatgctaagaataa 22470422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 100 - 297
Target Start/End: Original strand, 8145134 - 8145331
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||  || |||||||  |||||||| ||||||||||||||||||||||||| |  || |||||  ||  |||||||  ||| |||||    
T  8145134 ccgatttgcatgatttgttcgtgaattatttcaaaaaccccctaaaattgctatgtttcgggaaaactataattacatactcaaatatagaaaacattac 8145233  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataatttaag 297  Q
    ||| || |||||||||| | |||||||| |||||||||||  |||| ||| ||||||||||| |||  || | |||||||||||||||||||| ||||    
T  8145234 aaaagtcccgaaatcataggcaattgttttaatactcctcatttttgctgctaaaacctactgaaattgattgaaaaacatgctaagaataatgtaag 8145331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 31284115 - 31283923
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaa-atta 198  Q
    |||||||||| |||||| || | ||||||||||||||||||||||||||||||||||| ||||| || |  ||||| |||  |||||||  |||| ||||    
T  31284115 ccgatttgcatgatttcttcgtcaattacatcaaaaacaccctaaaattgctatgttttgggaataatagaattacagactcaaatataaaaaaacatta 31284016  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||| ||||||||||   |||||| |||||||||| |||   ||  |||||||||||||| |||| || | ||||||||| |||||||||    
T  31284015 caaatgtcccgaaatcataagcaattgctctaatactcttctacattgttggtaaaacctacttaaaatgattgaaaaacatgataagaataa 31283923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 291
Target Start/End: Complemental strand, 13906761 - 13906603
Alignment:
Q  133 aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaat 232  Q
    |||||| ||||||||||||||||||||||||||| |  ||||| |||  |||||||  ||| ||||||||||| ||||||||||   |||||| ||||||    
T  13906761 aaaacatcctaaaattgctatgtttcgggaagaatagaattacagactcaaatatagaaaacattacaaatgtcccgaaatcataagcaattgatctaat 13906662  T
Q  233 actcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||  || |||| | ||||||||||||||  |||  |||||||||||||||||||    
T  13906661 actcctccattatacttgcaaaacctactaaaattgacagaaaaacatgctaagaataa 13906603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 281
Target Start/End: Original strand, 17134989 - 17135159
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||||||| |||||||| |||||||||||||||||||| || |  |||||  ||  |||||||  ||| | ||||||||| | ||    
T  17134989 gatttcttcgtgaattacatcaagaacacccttaaattgctatgtttcgggaataatagaattacatactcaaatatagaaaacaatacaaatgtccgga 17135088  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||| |||||||  | |||||||||||| |||| || ||||||||||||||||| |||| |||||||||    
T  17135089 aatcatagacaattaatataatactcctctattttgctagtaaaacctactaaaaatgactgaaaaacatg 17135159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 103 - 291
Target Start/End: Original strand, 19912468 - 19912657
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccct-aaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    ||||||| |||||| ||||||||||| |||||||| |||| ||||||| ||||||||||||| |  |  ||||| | |  |||||||  ||| |||||||    
T  19912468 atttgcatgatttcttcatgaattacttcaaaaacccccttaaaattgttatgtttcgggaaaactagaattacagtctcaaatatagaaaacattacaa 19912567  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | |||| || |||||  ||||| |||||||||||||||| |||| ||| ||||||||||| |||| |||| ||||| |||||||||||||    
T  19912568 aagttctgatatcatacacaatcgttctaatactcctcttttttgctgctaaaacctactgaaaatgactgaaaaatatgctaagaataa 19912657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 8765560 - 8765751
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    ||||| |||| |||||| || |||||||| |||||||| ||||||||||||||||||||  ||| |  |  ||||| |||  |||||||  ||| |||||    
T  8765560 ccgatctgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcaagaaaactagaattacagactcaaatatagaaaacattac 8765659  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||| |  ||| |||||||||||||||| |||| | | ||||||||| | |||| |||| |||||||||||||||||||    
T  8765660 aaaagtcccgaaatcataggaaatcgttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatgctaagaataa 8765751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 121 - 291
Target Start/End: Original strand, 18535677 - 18535847
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    ||||||||||||| ||||||||||||||  |||  |||||||| || |  ||||  |||   ||||||  ||| | ||||||||| ||||||||||   |    
T  18535677 tgaattacatcaagaacaccctaaaatttttatacttcgggaataatagaattatagactcgaatatagaaaacaatacaaatgtcccgaaatcataagc 18535776  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||  |||| |||||||||||||||||||    
T  18535777 aattgatctaatactcctctgctttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataa 18535847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 291
Target Start/End: Complemental strand, 3429433 - 3429244
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| |||||  |||| |||||||  |||||||||| ||||||||||||||||| |  ||||| |||  |||||||  ||  ||||||     
T  3429433 gatttgcttgatttcttcatgttttacttcaaaaaacccctaaaatttctatgtttcgggaagaataaaattacagactcaaatataaaaatcattacag 3429334  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| ||||||||||   |||||  ||||||||||||||| ||| |||||||||||||||||||  || | ||||||||| |||||||||    
T  3429333 atgtcccgaaatcatatgcaattcctctaatactcctctggtttgctggtaaaacctactaaaatagaatgaaaaacatgataagaataa 3429244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 224
Target Start/End: Complemental strand, 18735501 - 18735357
Alignment:
Q  79 tcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactga 178  Q
    ||||||| |||| ||||||| | |||||||| |||||| |  ||||||||||||| |||| ||||||||||||||||| || |||||| || ||||| ||    
T  18735501 tcttcggatgtc-ttgcattgctgatttgcatgatttctttgtgaattacatcaagaacaacctaaaattgctatgttccgagaagaatataattacaga 18735403  T
Q  179 cagaaatatattaaaaattacaaatgttccgaaatcattgacaatt 224  Q
    | ||||||||  ||| | ||||||||| |||||||||| |||||||    
T  18735402 ctgaaatatagaaaacaatacaaatgtcccgaaatcatagacaatt 18735357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 27073799 - 27073977
Alignment:
Q  64 ctcttgaatcttca---ttcttcggctgtcattgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgg 160  Q
    ||||||||||||||   |||||||| |||  |||  || |||||||||| |||||| || |||||||| |||||||| | ||||||||||||||||||||    
T  27073799 ctcttgaatcttcacaattcttcggttgttcttgatttgccgatttgcatgatttcttcgtgaattacttcaaaaacccgctaaaattgctatgtttcgg 27073898  T
Q  161 gaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    ||| |  |  ||||| |||  |||||||  ||| ||||||||  |||||||||||| |  |||||||||||||||||||    
T  27073899 gaaaactagaattacagactcaaatatagaaaacattacaaaatttccgaaatcatagggaattgttctaatactcctc 27073977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 13939057 - 13938866
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||| || ||||||||| ||||||||| || |  |  | ||| |||| |||||||  ||| |||||    
T  13939057 ccgatttgcatgatttcttcgtgaattacttcaaaaaccccataaaattgcaatgtttcggaaaaactagaactacagacacaaatatagcaaacattac 13938958  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||||| |||| |||||||||||||||  ||||  || ||||||||||| |||  |  | || ||||||||||||||||    
T  13938957 aaaagtcccgaaatcattggcaatcgttctaatactcctcctttttggtgctaaaacctactgaaattgctttaacaacatgctaagaataa 13938866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 101 - 245
Target Start/End: Original strand, 8448689 - 8448833
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| ||||||||  | | |||||||||||||||||||||||||| ||||||||| |||||||  | |||  ||  |||||||  ||| ||||||    
T  8448689 cgatttgcatgatttcgttgttagttacatcaaaaacaccctaaaattgccatgtttcggtaagaacaaaaatacaaactcaaatatagaaaacattaca 8448788  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgtttt 245  Q
    ||| |  ||||||||| | |||||| | |||||||||||||||||    
T  8448789 aatatctcgaaatcataggcaattgctataatactcctctgtttt 8448833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 14977692 - 14977883
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | |||||||| |||||||||||||||| |  |  |||||  ||  |||||||  ||| |||||    
T  14977692 ccgatttgcatgatttcttcgtgaattacttcaaaacccccctaaaaatgctatgtttcgggaaaactagaattacatactcaaatatagaaaacattac 14977791  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| || |||||||||| | |||||||| |||||||||||  |||| ||  |||| | ||||||||   ||| ||||| |||||||||||||    
T  14977792 aaaagtcccgaaatcataggcaattgttataatactcctcctttttgctactaaatcatactaaaataaactgaaaaatatgctaagaataa 14977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 111 - 291
Target Start/End: Complemental strand, 20891842 - 20891665
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||||| |||| ||||||||||||||||||||||| ||||| || || |   |  ||  ||| |||  ||| | ||||||||| ||||    
T  20891842 gatttcttcgtgaattacctcaagaacaccctaaaattgctatgttttgggaataatataa---catactcaaacatagaaaacaatacaaatgtcccga 20891746  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     ||||| | |||||| | ||||| |||| ||||||  |||||||||||||| ||||||||| ||||| |||||||||||||    
T  20891745 tatcataggcaattgatataatattcctatgttttgttggtaaaacctactgaaaacgactgaaaaatatgctaagaataa 20891665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 8770532 - 8770641
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| ||||||||||||| |  ||| |||||||||||||||| |||| | | ||||||||| | |||| |||| |||||||||    
T  8770532 aaatatagaaaacattacaaaagttccgaaatcataggaaatcgttctaatactcctcttttttgcagctaaaacctattgaaaatgactgaaaaacatg 8770631  T
Q  282 ctaagaataa 291  Q
    ||||||||||    
T  8770632 ctaagaataa 8770641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 5509955 - 5510018
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| || ||||||||||||| |||| ||||||||||||||||||||||||    
T  5509955 ccgatttgcatgatttcttcgtgaattacatcaagaacatcctaaaattgctatgtttcgggaa 5510018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 18457240 - 18457132
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| || |||||||||| | ||||||||||||||||||||  |||| ||| ||||||||||| ||||  ||| || |||||     
T  18457240 aaatatagaaaacattacaaaagtcccgaaatcataggcaattgttctaatactcctcctttttgctgctaaaacctactgaaaataactgaataacatc 18457141  T
Q  282 ctaagaata 290  Q
    |||||||||    
T  18457140 ctaagaata 18457132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 20886755 - 20886945
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || ||||||||||| ||||| || ||||||||| ||||||||||||||| |  ||||  |||  |||||||  ||| |  ||    
T  20886755 ccgatttgcatgatttcttcgtgaattacatc-aaaacgccttaaaattgccatgtttcgggaagaatagaattatagactcaaatatagaaaacaaaac 20886853  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||| ||||||||||   | ||||   |||||||||||| || |    |||||||||| | ||||||| | |||||||||||||||||||    
T  20886854 aaatgtcccgaaatcataagcgattgcgttaatactcctctattctggatgtaaaacctattgaaaacgattgaaaaacatgctaagaataa 20886945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 261
Target Start/End: Original strand, 16223388 - 16223538
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||||||| |||||||||||||| |||||||||||||| |   | |||||  ||  |||||||  ||| |||| |||||| |  |    
T  16223388 gatttcttcgtgaattacatcaagaacaccctaaaatttctatgtttcgggaaaactctaattacatactcaaatatagaaaacattataaatgtcctaa 16223487  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctact 261  Q
    |||||| |  ||||  |||||||||||| ||||||  ||||||||||||||    
T  16223488 aatcataggaaatttctctaatactcctatgttttgatggtaaaacctact 16223538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 28326352 - 28326279
Alignment:
Q  92 ttgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    ||||||| |||||||||| |||||| || | ||||||||||||| |||||||||||  |||||||||||||||||    
T  28326352 ttgcattgccgatttgcatgatttcttcgtcaattacatcaaaa-caccctaaaataactatgtttcgggaagaa 28326279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 291
Target Start/End: Complemental strand, 2166243 - 2166055
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccc-taaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    ||||||| |||||| || |||||||| ||||||| |||| |||||||||||||||||||||| |  |  |||||  |   |||||||  ||| |||||||    
T  2166243 atttgcatgatttcttcgtgaattacttcaaaaaaacccctaaaattgctatgtttcgggaaaactagaattacaaattcaaatatagaaaacattacaa 2166144  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || |||||| |||   |||| ||| |||||||||||  ||||  || ||||||||||| |||| ||| ||||||||||| ||||||||    
T  2166143 aagtcccgaaagcatattcaatcgttttaatactcctcctttttgttgctaaaacctactgaaaatgac-aaaaaacatgccaagaataa 2166055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 289
Target Start/End: Complemental strand, 12372520 - 12372354
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    |||||||| ||||||||  ||||||||| ||||||||| ||||||  |  ||||| |||  ||||| |  ||| ||||||||||| || ||||||| |      
T  12372520 tgaattacttcaaaaac--cctaaaattactatgtttctggaagactagaattacagactcaaatacagaaaacattacaaatgtcccaaaatcataggt 12372423  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaat 289  Q
     | ||||||||||||||||  |||| || |||||||||||| |||| || | ||||| |||||||||||    
T  12372422 cactgttctaatactcctcctttttgctcgtaaaacctactgaaaatgattgaaaaaaatgctaagaat 12372354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 34276566 - 34276457
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| || || ||||||| | |||| ||| |||||||||||  |||| ||| ||||||||||| |||| |||| ||||| |||    
T  34276566 aaatatagaaaatattacaaaagtcccaaaatcataggcaatcgttataatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaatatg 34276467  T
Q  282 ctaagaataa 291  Q
    ||||||||||    
T  34276466 ctaagaataa 34276457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 52935645 - 52935553
Alignment:
Q  196 ttacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||||| |||||||||    |||||  ||||||| || |||||||| ||||||||||||||| |||| || | |||||||||||||||||||    
T  52935645 ttacaaatgtcccgaaatcag---caattactctaatattcatctgttttgctggtaaaacctactgaaaatgattgaaaaacatgctaagaataa 52935553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 18735592 - 18735524
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||||| |||||||| ||||||| |||  ||||||||||||||   ||||||||||||||||||||    
T  18735592 tcttggaacttgggaacagaattcctccctctgtaaagtcttctgagggctcttgaatcttcattcttc 18735524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 19909238 - 19909102
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||| |||||| || |||||||  |||||||| |||||||||||||||||| |||||| |  |  ||||| |||  |||||||  ||| || ||||    
T  19909238 gatttgcatgatttcttcgtgaattatttcaaaaaccccctaaaattgctatgttccgggaaaactacaattacagacttaaatatagaaaacataacaa 19909139  T
Q  202 atgttccgaaatcattgacaattgttctaatactcct 238  Q
    | || |||||||||| |  ||| ||||||||||||||    
T  19909138 aagtcccgaaatcatagggaatcgttctaatactcct 19909102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 20891965 - 20891897
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||| ||| |||||||| |||| ||||||  ||||||||||||||  |||||||||||||||||||||    
T  20891965 tcttgaaacttgggaacaaaatttcttcctctgtaaagtcttctgaggcctcttgaatcttcattcttc 20891897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 26092782 - 26092849
Alignment:
Q  92 ttgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgg 160  Q
    |||| ||||||||||||| |||||| || ||||||||||| |||||||| || ||||||||||||||||    
T  26092782 ttgctttaccgatttgcatgatttcttcttgaattacatc-aaaacaccatagaattgctatgtttcgg 26092849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 291
Target Start/End: Complemental strand, 820016 - 819866
Alignment:
Q  140 cctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    |||||||||||||||||||||||| || |  ||||| |    |||||||  ||| ||| ||||| | ||||||||||   ||| || |||||||||||||    
T  820016 cctaaaattgctatgtttcgggaataatagaattacagttc-aaatataaaaaacatttcaaatatcccgaaatcataagcaaatgatctaatactcctc 819918  T
Q  240 tgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || | || |||||||||||| |||  |||| |||||||||||||||||||    
T  819917 tattatgcttgtaaaacctactgaaattgactgaaaaacatgctaagaataa 819866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 16228555 - 16228492
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| || |||||||| |||||||  |||||||||| ||||||||||||||    
T  16228555 ccgatttgcatgatttcttcttgaattacttcaaaaaacccctaaaatttctatgtttcgggaa 16228492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 19533679 - 19533802
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || |||||||| |||||||| |||| |||||||||||||||||||| |  |  ||||| |||  |||||||  ||| |||||||| ||  |||    
T  19533679 gatttcttcgtgaattacttcaaaaaccccctcaaattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattacaaaagtctcga 19533778  T
Q  211 aatcattgacaattgttctaatac 234  Q
    |||||| | |||| ||||||||||    
T  19533779 aatcataggcaatcgttctaatac 19533802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 31284618 - 31284551
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    |||||| |||||||||||||||| || |||   ||||||||| ||| |||||||||||||||||||||    
T  31284618 tcttgggacctgggaacataatttctccctctttaaagtcttttgaaacctcttgaatcttcattctt 31284551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 13906900 - 13906838
Alignment:
Q  20 gaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    |||| |||||||||||||||| |||| |||||||||| |||  |||||||||||| |||||||    
T  13906900 gaacttgggaacataattcctcccttagtaaagtcttatgaggcctcttgaatctccattctt 13906838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 19388061 - 19387995
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||||| | |||||| || ||||||||||||| |||||| |||||||| ||||||| ||||||||    
T  19388061 ccgatttgaatgatttcttcgtgaattacatcaagaacaccataaaattgatatgttttgggaagaa 19387995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 75
Target Start/End: Complemental strand, 3115031 - 3114971
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatctt 75  Q
    ||||||||| |||||||||||||||| |||  |||| |||||||||  |||||||||||||    
T  3115031 tcttggaacttgggaacataattcctccctctgtaacgtcttctgaggcctcttgaatctt 3114971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 11636285 - 11636229
Alignment:
Q  26 gggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    |||||| | ||||||||||  ||||||||||||||  ||||||||||||||||||||    
T  11636285 gggaaccttattccttcctatgtaaagtcttctgaggcctcttgaatcttcattctt 11636229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 22470727 - 22470659
Alignment:
Q  15 tcttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    |||| |||| |||||||| ||||||| |||| || |||||||||||  ||| |||||||||||||||||    
T  22470727 tcttcgaacttgggaacaaaattcctccctttgtgaagtcttctgaggcctattgaatcttcattcttc 22470659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 3002943 - 3003005
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||||||| |||||| || ||||||||||| |||||||| || |||||||||||||| ||||    
T  3002943 ccgatttgcatgatttcttcttgaattacatc-aaaacaccgtagaattgctatgtttcaggaa 3003005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 8881611 - 8881473
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||| | ||||||||||||||| ||| ||||| |  || ||||| |||  |||||||  ||| ||||     
T  8881611 ccgatttgcatgatttcttcgtgaattacttcaaaacc-ccctaaaattgctatattttgggaaaactataattacagactcaaatatagaaaacattat 8881513  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    ||| || |  ||||||| | |||| |||||||||||||||    
T  8881512 aaaagtcctaaaatcataggcaatcgttctaatactcctc 8881473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 291
Target Start/End: Original strand, 12517285 - 12517367
Alignment:
Q  209 gaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||| | ||||  ||||||||||||||  |||| ||  ||||||||||| |||| |||| ||||| |||||||||||||    
T  12517285 gaaatcataggcaatcattctaatactcctcctttttgctactaaaacctactgaaaatgactgaaaaagatgctaagaataa 12517367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 291
Target Start/End: Complemental strand, 19387937 - 19387879
Alignment:
Q  233 actcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||| |||| ||||||||||||||| |||| |||| ||||||| ||||| |||||    
T  19387937 actcctctattttgctggtaaaacctactgaaaatgactgaaaaacaagctaaaaataa 19387879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 23637519 - 23637561
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||    
T  23637519 tgaattacatcaaaaacaccctagaattgctatatttcaggaa 23637561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 25851050 - 25850968
Alignment:
Q  209 gaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||||||| | |||| ||| |||||||||||  || | ||| |||| |||||||||||  ||| |||||||||||||||||||    
T  25851050 gaaatcataggcaatcgttttaatactcctcctttctgctgctaaatcctactaaaaataactgaaaaacatgctaagaataa 25850968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 26092882 - 26092932
Alignment:
Q  191 aaaaattacaaatgttccgaaatc-attgacaattgttctaatactcctct 240  Q
    ||||||||||||||| |||||| | || |||||||||||||||||||||||    
T  26092882 aaaaattacaaatgtcccgaaaaccatagacaattgttctaatactcctct 26092932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 160
Target Start/End: Complemental strand, 16242399 - 16242342
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgg 160  Q
    ||||||| |||||| || |||||||  |||||| | ||||||||||||||||||||||    
T  16242399 atttgcatgatttcttcgtgaattaattcaaaacccccctaaaattgctatgtttcgg 16242342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 27412788 - 27412731
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctc 239  Q
    |||||||  ||| |||||||| ||||||||||||| | |||||||| |||||||||||    
T  27412788 aaatatagaaaacattacaaaagttccgaaatcataggcaattgttttaatactcctc 27412731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 52936581 - 52936528
Alignment:
Q  104 tttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgttt 157  Q
    |||||| |||||  || ||||||||||||| |||||||||||||| ||||||||    
T  52936581 tttgcacgattttttcgtgaattacatcaagaacaccctaaaattactatgttt 52936528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 291
Target Start/End: Original strand, 7805640 - 7805819
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccga 210  Q
    |||||| || ||||||||| ||||| |||| ||| ||||||| |||| |||| ||| || ||||  |||  ||||||   ||| |||||||||||  | |    
T  7805640 gatttcttcgtgaattacaacaaaa-caccgtaatattgctacgttttgggacgaatataattaaagactcaaatattgaaaacattacaaatgtatcaa 7805738  T
Q  211 aatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||||    ||||| |||||||||||||| ||||    ||||||| |||| |||| || | |||||||||||||||||||    
T  7805739 aatcataagtaattgctctaatactcctctattttggatgtaaaacatactgaaaatgattgaaaaacatgctaagaataa 7805819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 19388172 - 19388105
Alignment:
Q  15 tcttggaacctgggaacataattccttccttc-gtaaagtcttctgacacctcttgaatcttcattctt 82  Q
    ||||||||| ||||||||||||| || ||||| ||||||||||||||  ||| ||||| ||||||||||    
T  19388172 tcttggaacatgggaacataatttct-ccttctgtaaagtcttctgaggcctattgaagcttcattctt 19388105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 19573775 - 19573723
Alignment:
Q  111 gatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaa 163  Q
    |||||| || |||||||| |||||||| |||| ||||||||||||||| ||||    
T  19573775 gatttcttcgtgaattacttcaaaaaccccctcaaattgctatgtttcaggaa 19573723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 101 - 291
Target Start/End: Complemental strand, 244040 - 243851
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| |||||| |  ||||||||||||||||||| |||||||||||||||||||||||||| |  |||||  |   |||||||  ||| ||||||    
T  244040 cgatttgcatgatttctttgtgaattacatcaaaaacacactaaaattgctatgtttcgggaagaatagaattacatattcaaatatagaaaacattaca 243941  T
Q  201 aatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||| |   ||||| || |||||||| ||||||||||||||||||| || |||||||||||| |||| |||| ||||| |||||||||||||    
T  243940 aatatcatgaaataatagacaattgctctaatactcctctgttttgctagtaaaacctacttaaaatgact-aaaaatatgctaagaataa 243851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 102 - 290
Target Start/End: Complemental strand, 10300 - 10114
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaa 201  Q
    |||||||  |||||| || ||||||||||||| |||||||||||||||||  ||||| ||||||| |  |||||  ||  |||||||  ||| | |||||    
T  10300 gatttgcttgatttcttcgtgaattacatcaagaacaccctaaaattgct--gtttcaggaagaatagaattacaaactcaaatatagaaaacaatacaa 10203  T
Q  202 atgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    |||||  |||||||| |||||||| ||||||||||||||||||| || |||||||||||| |||| |||| |||| |||||||| ||||    
T  10202 atgttatgaaatcatagacaattgatctaatactcctctgttttgctagtaaaacctactgaaaatgactgaaaagcatgctaataata 10114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 291
Target Start/End: Original strand, 5698 - 5807
Alignment:
Q  182 aaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatg 281  Q
    |||||||  ||| |||||||| || || ||||||| ||||||||||||||||||||||  |||| ||  |||| |||||||||||  ||| |||||||||    
T  5698 aaatatagaaaacattacaaaagtcccaaaatcatagacaattgttctaatactcctcctttttgcttctaaatcctactaaaaataactgaaaaacatg 5797  T
Q  282 ctaagaataa 291  Q
     ||| |||||    
T  5798 ttaaaaataa 5807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 10412 - 10346
Alignment:
Q  17 ttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcattcttc 83  Q
    ||||||| |||||| ||||||||| |||| || ||||||| |||  |||||||||||||||||||||    
T  10412 ttggaacttgggaatataattcctccctttgtgaagtcttttgaggcctcttgaatcttcattcttc 10346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 291
Target Start/End: Complemental strand, 5060 - 4892
Alignment:
Q  121 tgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgac 220  Q
    ||||||||||||| |||||||||||||| |||||||| ||||| || |  ||||  |||   ||||||  ||| | |||||||||||| |||||||   |    
T  5060 tgaattacatcaagaacaccctaaaatttctatgttttgggaataatagaattatagactcgaatatagaaaacaatacaaatgttccaaaatcatg--c 4963  T
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    ||||| ||||||||||||||  ||| |||||||||||||||||||  |||| |||||||||||||||||||    
T  4962 aattgatctaatactcctctactttgctggtaaaacctactaaaattgactgaaaaacatgctaagaataa 4892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 13564 - 13495
Alignment:
Q  221 aattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    ||||| ||||||| ||||||  |||  ||||||||||||||||||  || | ||||||||||||||||||    
T  13564 aattgatctaatattcctctactttgttggtaaaacctactaaaattgattgaaaaacatgctaagaata 13495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 291
Target Start/End: Complemental strand, 93035 - 92848
Alignment:
Q  104 tttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaat 203  Q
    |||||| |||||| || |||||||| |||||||| ||||||||||||||||||||||||| |  |  ||||  |||  |||||||  ||| ||||||||     
T  93035 tttgcatgatttcttcgtgaattacttcaaaaaccccctaaaattgctatgtttcgggaaaactagaattatagactcaaatatagaaaacattacaaaa 92936  T
Q  204 gttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     | | ||||  || | |||| | ||||||| |||||| |||| ||| |||| |||||||||||  ||| |||||||||||||||||||    
T  92935 ttcctgaaacgataggcaatggctctaatattcctcttttttgctgctaaaccctactaaaaataactgaaaaacatgctaagaataa 92848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 133 - 291
Target Start/End: Complemental strand, 16645 - 16488
Alignment:
Q  133 aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaat 232  Q
    |||||| ||| |||||| |||||||| ||| ||| |  ||||| |||  |||| ||  ||| ||||||||||| ||||||||||  ||||||| ||||||    
T  16645 aaaacatccttaaattgttatgtttcaggaggaatagaattacagactcaaatgtagaaaatattacaaatgtcccgaaatcataaacaattgatctaat 16546  T
Q  233 actcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    | || ||| || | || ||||||||||||||||| |||| |||||||||||||||||||    
T  16545 attcatctattctgcttgtaaaacctactaaaaatgact-aaaaacatgctaagaataa 16488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1017 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 517 - 618
Alignment:
Q  132 aaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcattgacaattgttctaa 231  Q
    ||||||| ||||||||||| ||||||||||||||| |  |||||||||  |||||||  ||| |||| |||||||||||||||||   ||||||||||||    
T  517 aaaaacatcctaaaattgcaatgtttcgggaagaatagaattactgactcaaatatagaaaacattaaaaatgttccgaaatcataagcaattgttctaa 616  T
Q  232 ta 233  Q
    ||    
T  617 ta 618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 291
Target Start/End: Original strand, 4710 - 4901
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgatt-actgacagaaatatattaaaaatta 198  Q
    |||||||||| |||||| || |||||||  |||||| | || ||||||||||||||||   ||| |||  |||| || |||  |||||||  ||| ||||    
T  4710 ccgatttgcatgatttcttcgtgaattatttcaaaagccccataaaattgctatgttttaagaa-aactagatttacagactcaaatatagaaaacatta 4808  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
    |||| || | |||||||| | |||| |||||||||||||||  |||| ||| ||||||||||| |||| |||| |||||||||||| ||||||    
T  4809 caaaagtgctgaaatcataggcaatcgttctaatactcctcctttttgctgctaaaacctactgaaaatgactgaaaaacatgctacgaataa 4901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 290
Target Start/End: Original strand, 38177 - 38367
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattac-tgacagaaatatattaaaaatta 198  Q
    |||||||||  |||||| || ||||||||||||||| ||||||||||||| ||||||||||||| || |  ||||| ||||  |||||||  ||| ||||    
T  38177 ccgatttgcgtgatttcttcgtgaattacatcaaaa-caccctaaaattgttatgtttcgggaaaaagagaattacatgactcaaatatagaaaacatta 38275  T
Q  199 caaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
    |||||||   ||||||||   |||||| ||||||| |||||| || ||   | |||||||||| ||||  ||| | ||||||||||||||||    
T  38276 caaatgtcttgaaatcataagcaattgctctaatattcctctattctagatgaaaaacctactgaaaataactgacaaacatgctaagaata 38367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 291
Target Start/End: Complemental strand, 20462 - 20272
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||||| |||||||| |||| |||||||||||||| ||||| |  |  |||||  ||  |||||||  ||| |||||    
T  20462 ccgatttgcatgatttcttcgtgaattacttcaaaaaccccctcaaattgctatgttttgggaaaactagaattacatactcaaatatagaaaacattac 20363  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaataa 291  Q
     || || |||||||||| | |||| |||||||||||||||  |||| ||| ||   ||||||||| |  | | |||||||||||||||||||    
T  20362 caa-gtcccgaaatcataggcaatcgttctaatactcctcctttttgctgctatttcctactaaataaaattgaaaaacatgctaagaataa 20272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 265
Target Start/End: Complemental strand, 182722 - 182557
Alignment:
Q  100 ccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattac 199  Q
    |||||||||| |||||| || |||||| | |||| ||| ||||||||||| | |||||||| || |  |  ||||| |||  |||||||  ||| |||||    
T  182722 ccgatttgcatgatttcttcgtgaatttcttcaagaactccctaaaattgttgtgtttcggaaaaactagaattacagactcaaatatagaaaacattac 182623  T
Q  200 aaatgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaa 265  Q
    |||  | |||||||||| | |||| |||||||||||||||  |||| ||| |||| ||||||||||    
T  182622 aaaattcccgaaatcataggcaatcgttctaatactcctcctttttgctgctaaatcctactaaaa 182557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 290
Target Start/End: Original strand, 22925 - 23112
Alignment:
Q  103 atttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaa 202  Q
    ||||||| |||||| || |||| ||| |||||||| || || ||||||||||||||||||| |  |  ||||| |||  |||||||  ||| |||| |||    
T  22925 atttgcatgatttcttcgtgaaatacttcaaaaactccttataattgctatgtttcgggaaaactagaattacagactcaaatatagaaaacattaaaaa 23024  T
Q  203 tgttccgaaatcattgacaattgttctaatactcctctgttttactggtaaaacctactaaaaacgactaaaaaacatgctaagaata 290  Q
     || |||||| ||| | |||| |||||||||||||||  ||||  || ||| ||||| | ||||  ||| ||| ||||||||||||||    
T  23025 agtcccgaaaccataggcaatcgttctaatactcctcctttttggtgctaacacctaattaaaataactgaaatacatgctaagaata 23112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 95399 - 95461
Alignment:
Q  16 cttggaacctgggaacataattccttccttcgtaaagtcttctgacacctcttgaatcttcat 78  Q
    |||| ||| |||||||||||||||| |||  ||||||||| |||| |||||||||||||||||    
T  95399 cttgaaacttgggaacataattcctccctatgtaaagtctcctgagacctcttgaatcttcat 95461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 12011 - 12094
Alignment:
Q  133 aaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattacaaatgttccgaaatcat 216  Q
    ||||||||||| ||||||||||||| |||||||| |  ||||| |||  |||||||  ||| |||| |||||| ||||||||||    
T  12011 aaaacaccctagaattgctatgttttgggaagaatagaattacagactcaaatatagaaaacattataaatgtcccgaaatcat 12094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 2184 - 2128
Alignment:
Q  92 ttgcattaccgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaatt 148  Q
    ||||||| ||||||| || |||||| || ||||||||||||||||| ||||| ||||    
T  2184 ttgcattgccgatttacatgatttcttcgtgaattacatcaaaaactccctagaatt 2128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 41745 - 41682
Alignment:
Q  102 gatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaa 166  Q
    |||||||| |||||| || ||| |||| ||||||| |||||||||||||||||||| | ||||||    
T  41745 gatttgcatgatttcttcgtgatttacctcaaaaa-accctaaaattgctatgttttgagaagaa 41682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 202042 - 201938
Alignment:
Q  101 cgatttgcaagatttcgtcatgaattacatcaaaaacaccctaaaattgctatgtttcgggaagaacatgattactgacagaaatatattaaaaattaca 200  Q
    ||||||||| ||||||  ||||||||||||||| |||| |  ||||||| ||||||||| ||| |   ||||||| |||  |||||||  ||| ||||||    
T  202042 cgatttgcatgatttctccatgaattacatcaagaacatcgaaaaattgttatgtttcgagaaaactctgattacagactcaaatatagaaaacattaca 201943  T
Q  201 aatgt 205  Q
    |||||    
T  201942 aatgt 201938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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